RchiOBHm_Chr4g0416941

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Reverse (-)
42131483 .. 42135290
3808 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ38703

Sequence Viewer

Length: 2541 bp
ATGCAACCTATTGGGATGCCAATGGATATTAGAACCAGAAGCTTTTGTGCTTTACATGGCTCCATGTTCTTCTTCCTTTTGATTTTCATTTTCAGCTTCCTTCCATCACGTTATCACTGTGCTGAAGTTGATGGAATAACTCTTTCCCAACCGTTAGCGCAGGGACAAACCCTAGTTTCCCCAGGCCACATTTTTGAGTTAGGCTTCTTCAGTCCTAATAATTATGCTAACAAGTATGTGGGGATATGGCACAAGGATATATCTCCGCGAAAAGTTGTATGGGTGGCCAACAGAGAAAATTCTCTTGCAGCTACAGACAACTTGGCGAGCTTGACTGTTAGCAGCAATGGGAATCTGATGCTTGTTGATGGGAAACAGAAGTCTATTTGGTCTACCAATGTTCCTTCTTCGGTGTCATCATTGAATACAAGTTCAGTTGCTGCAGTTCTTTTAGACAATGGAAACTTTGTTCTCAATGATCATATGGGAGCTGAGTTATGGCAGAGCTTTGATCACCCTGGTGACACAGTCCTGCCAAACATGGTGTTGCGTTACAATAAGTCTGGAAAGGGGAACTTCTTGATTTCTTGGAAAGCAGAAAATGATCCATCACCAGGGAGATTCTTGCTTGGATTGGCGCCACAGACACCGTCACAAGTCTTCATTTGGATCAATAATGGATCAAATGATTCACATTCAATTCCTTACTGGAGAAGTGGACCATGGGATAAGTCGAGCTTCATTGGTGTACCAGAAATGGATCGTCGATATATAAATGGATTTAGTGTAGATGATAACTTAAAGCAGGGCACACGAGATTTTTCTTATAGTTTATACGACAAACCTGTGGCATACATATACATATCTCCAGAAGGAATAGTGAGGCTTAGATTTTCGAAGAATGATGGGAAGTGGTATGTTTATTGGCAGACACCTAAGAATCCATGTGACATTTATGGAGCTTGTGGACCATTTGGAATTTGCAAAGCTTCTGCATCTCCAATCTGTAAGTGTTTAAAAGGCTTTGTACCAAAGTCAAGTGCGGAATGGAGCAAAGGAAACTGGACAGGAGGGTGTGTGCGGCAGACCAAATTGTTTTGTGAGAGACAAAGAAATAAGTCAGTCTCATCAAGAGGAAAACAAGTTGATGATGATGGGTTTTGGAAGATGGTGAAGTTGAAAATACCAGATTCTCATGAGTTCATTACTGCTTTCAATGCTGAAGAAACGTCCAACGATTGCAAATTACGGTGTCTAAACAATTGTTCTTGCCTTGCTTATGCATTTGTTAATAATATAGGGTGTTTGGTGTGGTCCAAAGATCTTATTGATATACAGCAGTTTTCATCTTCTGTCGGAGTGGATCTTTATATTCGCCTAGCACGCTCCGAACTAGGTGAAGGAAAGCCAATAAAGTTAATCGCCAGCCTTACAGCTATTGGTTTTATCAAACTAACAACACAGAACTTTGAATCTACTGGTATGATTAAGAGTTCAAGAGATGGTCTCCGAGAGTATATAGGAAAGCATAATCCCTCAGAGCTGAAGATATATGATTTTGATAGCATACTAATTGCTACAAATAATTTCAGTCTTGCAAACAAACTTGGGCAAGGAGGATTTGGCCCAGTTTATAAGGGTATGCTACAAGATGGGAAGGAAGTAGCAGTGAAGAGACTATCCAGTAGCTCAGGACAAGGCATTGAAGAGTTCAAGAACGAGATGCTGTTGATCTCCAATCTTCAACATAAAAATCTAGTTAGGATAATGGGTTGCTGCATTAAAGAGGACGAGAAGTTACTGATTTACGAGTTCATGCCAAACAAAAGCTTGGATACTTTTCTATTTGATACGAGGAAGAGAGCAGTGCTTGATTGGGTGACACGCTTTAATATTATTCAGGGTGTTGCTAGAGGGCTTCTTTATCTCCATCATGATTCGTATGTGAAGGTAATACATAGAGATCTGAAAGTCAGCAACATTCTCTTGGATGAGAAAATGAATCCAAAAATTTCAGATTTTGGATTGGCACGAATAATTGAAGGAACACAAAGTCTAGAAAATACTCAAAAAGTTGTGGGAACACGTGGCTATATGTCTCCGGAGTATGCCATTGGGGGAATGTTTTCTGAAAAATCCGATGTCTACAGCTTTGGGGTTGTGGTCTTGGAGATTATTAGCAGCAAGAAGAATACCAGCTTCTATTTATATGACCAACAGCTAGGCTTTCTAGCCTATGCATGGAACTTATGGAATGAAGGCAGAGGGTTGGAATTGGTAGATGAAATATTGGGCAATTCATATTCCTCATTGGAAGTATTTAAATGCGTGCATATCGGGCTTTTGTGTGTACAAGACAATGCTGTGGATAGGCCAACCATAGCGGATATAGCTTTGATGTTAACTAGCGAGAAAGATGGTCCACAACCTAAGATGCCTGTATTCACTATCCAAAACTCAGCTTATCATCCTCAACCACACTTTGAGAATACAAATTCCTCCAAAAATGAAGCTAGCATTACAATGATTGAAGGACGATAA

Protein Analysis

846

Amino Acids

94.82

Weight (kDa)

8.25

Isoelectric Point (pI)

38.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 92 - 198 2e-28 D-mannose binding lectin
S_locus_glycop PF00954 237 - 346 2.5e-29 S-locus glycoprotein domain
PAN_2 PF08276 383 - 445 9.8e-16 PAN-like domain
PK_Tyr_Ser-Thr PF07714 532 - 730 6.6e-47 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 532 - 730 4e-45 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1635
AccB1I GGYRCC 1 cut(s) 637
AccI GTMKAC 2 cut(s) 392, 2145
AccII CGCG 1 cut(s) 268
AccIII TCCGGA 1 cut(s) 2101
AciI CCGC 4 cut(s) 266, 1043, 1081, 2384
AclWI GGATC 5 cut(s) 599, 677, 688, 768, 1371
AcoI YGGCCR 1 cut(s) 285
AcsI RAATTY 4 cut(s) 298, 978, 2010, 2494
AcuI CTGAAG 4 cut(s) 144, 193, 1242, 1565
AcvI CACGTG 1 cut(s) 2087
AcyI GRCGYC 1 cut(s) 638
AfaI GTAC 3 cut(s) 750, 1029, 2352
AfiI CCNNNNNNNGG 2 cut(s) 614, 2241
AflIII ACRYGT 1 cut(s) 2084
AjnI CCWGG 3 cut(s) 181, 517, 613
AleI CACNNNNGTG 1 cut(s) 519
AloI GAACNNNNNNTCC 2 cut(s) 453, 485
Alw26I GTCTC 5 cut(s) 1099, 1129, 1511, 1669, 2103
AlwI GGATC 5 cut(s) 599, 677, 688, 768, 1371
AlwNI CAGNNNCTG 1 cut(s) 440
Aor13HI TCCGGA 1 cut(s) 2101
AoxI GGCC 4 cut(s) 184, 285, 1624, 2372
ApeKI GCWGC 5 cut(s) 308, 342, 440, 1776, 2181
ApoI RAATTY 4 cut(s) 298, 978, 2010, 2494
Asp700I GAANNNNTTC 1 cut(s) 2125
AspLEI GCGC 2 cut(s) 160, 640
AspS9I GGNCC 5 cut(s) 719, 968, 1314, 1625, 2420
AsuHPI GGTGA 6 cut(s) 506, 533, 603, 1183, 1409, 1891
AsuII TTCGAA 1 cut(s) 896
AsuNHI GCTAGC 1 cut(s) 2513
AvaII GGWCC 4 cut(s) 719, 968, 1314, 2420
BaeGI GKGCMC 1 cut(s) 812
BalI TGGCCA 1 cut(s) 287
BanI GGYRCC 1 cut(s) 637
BauI CACGAG 1 cut(s) 813
BbrPI CACGTG 1 cut(s) 2087
BbsI GAAGAC 1 cut(s) 652
BbvI GCAGC 5 cut(s) 320, 354, 427, 1763, 2193
BciT130I CCWGG 3 cut(s) 183, 519, 615
BciVI GTATCC 1 cut(s) 1828
BclI TGATCA 2 cut(s) 478, 511
BcoDI GTCTC 5 cut(s) 1099, 1129, 1511, 1669, 2103
BfmI CTRYAG 3 cut(s) 312, 441, 2146
BfoI RGCGCY 1 cut(s) 641
BfuI GTATCC 1 cut(s) 1828
BglII AGATCT 2 cut(s) 1321, 1963
BisI GCNGC 6 cut(s) 309, 343, 441, 1082, 1777, 2182
BlsI GCNGC 6 cut(s) 310, 344, 442, 1083, 1778, 2183
Bme1390I CCNGG 3 cut(s) 183, 519, 615
Bme18I GGWCC 4 cut(s) 719, 968, 1314, 2420
BmgT120I GGNCC 5 cut(s) 719, 968, 1314, 1625, 2420
BmiI GGNNCC 2 cut(s) 61, 639
BmrFI CCNGG 3 cut(s) 183, 519, 615
BmrI ACTGGG 1 cut(s) 1622
BmsI GCATC 5 cut(s) 6, 348, 1004, 1713, 2424
BmtI GCTAGC 1 cut(s) 2517
BmuI ACTGGG 1 cut(s) 1622
BpiI GAAGAC 1 cut(s) 652
BplI GAGNNNNNCTC 2 cut(s) 1491, 1523
BpmI CTGGAG 2 cut(s) 730, 852
Bpu10I CCTNAGC 1 cut(s) 1690
Bpu14I TTCGAA 1 cut(s) 896
BsaAI YACGTR 1 cut(s) 2087
BsaHI GRCGYC 1 cut(s) 638
BsaI GGTCTC 1 cut(s) 1511
BsaJI CCNNGG 4 cut(s) 181, 517, 614, 722
BsaWI WCCGGW 1 cut(s) 2101
BsaXI ACNNNNNCTCC 2 cut(s) 1062, 1092
Bsc4I CCNNNNNNNGG 2 cut(s) 614, 2241
Bse1I ACTGG 5 cut(s) 713, 1067, 1483, 1628, 1683
Bse3DI GCAATG 1 cut(s) 352
BseAI TCCGGA 1 cut(s) 2101
BseBI CCWGG 3 cut(s) 183, 519, 615
BseDI CCNNGG 4 cut(s) 181, 517, 614, 722
BseGI GGATG 3 cut(s) 21, 1996, 2467
BseLI CCNNNNNNNGG 2 cut(s) 614, 2241
BseMI GCAATG 1 cut(s) 352
BseMII CTCAG 4 cut(s) 483, 1551, 1704, 2472
BseNI ACTGG 5 cut(s) 713, 1067, 1483, 1628, 1683
BseSI GKGCMC 1 cut(s) 812
BseXI GCAGC 5 cut(s) 320, 354, 427, 1763, 2193
Bsh1236I CGCG 1 cut(s) 268
BshFI GGCC 4 cut(s) 186, 287, 1626, 2374
BshNI GGYRCC 1 cut(s) 637
BsiSI CCGG 1 cut(s) 2102
BslFI GGGAC 1 cut(s) 177
BslI CCNNNNNNNGG 2 cut(s) 614, 2241
BsmAI GTCTC 5 cut(s) 1099, 1129, 1511, 1669, 2103
BsmFI GGGAC 1 cut(s) 177
BsnI GGCC 4 cut(s) 186, 287, 1626, 2374
Bso31I GGTCTC 1 cut(s) 1511
Bsp119I TTCGAA 1 cut(s) 896
Bsp1286I GDGCHC 1 cut(s) 812
Bsp13I TCCGGA 1 cut(s) 2101
Bsp1407I TGTACA 1 cut(s) 2350
Bsp19I CCATGG 1 cut(s) 722
BspACI CCGC 4 cut(s) 266, 1043, 1081, 2384
BspANI GGCC 4 cut(s) 186, 287, 1626, 2374
BspCNI CTCAG 4 cut(s) 484, 1550, 1703, 2471
BspEI TCCGGA 1 cut(s) 2101
BspFNI CGCG 1 cut(s) 268
BspHI TCATGA 2 cut(s) 1195, 1933
BspLI GGNNCC 2 cut(s) 61, 639
BspMAI CTGCAG 1 cut(s) 445
BspOI GCTAGC 1 cut(s) 2517
BspPI GGATC 5 cut(s) 599, 677, 688, 768, 1371
BspT104I TTCGAA 1 cut(s) 896
BspT107I GGYRCC 1 cut(s) 637
BspTNI GGTCTC 1 cut(s) 1511
BsrDI GCAATG 1 cut(s) 352
BsrGI TGTACA 1 cut(s) 2350
BsrI ACTGG 5 cut(s) 713, 1067, 1483, 1628, 1683
BssECI CCNNGG 4 cut(s) 181, 517, 614, 722
BssNI GRCGYC 1 cut(s) 638
BssSI CACGAG 1 cut(s) 813
BssT1I CCWWGG 1 cut(s) 722
Bst2BI CACGAG 1 cut(s) 813
Bst2UI CCWGG 3 cut(s) 183, 519, 615
Bst4CI ACNGT 6 cut(s) 119, 153, 337, 529, 651, 1251
Bst6I CTCTTC 3 cut(s) 1667, 1701, 1853
BstACI GRCGYC 1 cut(s) 638
BstAUI TGTACA 1 cut(s) 2350
BstBAI YACGTR 1 cut(s) 2087
BstBI TTCGAA 1 cut(s) 896
BstC8I GCNNGC 5 cut(s) 328, 1384, 1426, 2330, 2515
BstDEI CTNAG 7 cut(s) 492, 887, 936, 1537, 1690, 2430, 2458
BstDSI CCRYGG 1 cut(s) 722
BstF5I GGATG 3 cut(s) 21, 1996, 2467
BstFNI CGCG 1 cut(s) 268
BstH2I RGCGCY 1 cut(s) 641
BstHHI GCGC 2 cut(s) 160, 640
BstMAI GTCTC 5 cut(s) 1099, 1129, 1511, 1669, 2103
BstMWI GCNNNNNNNGC 4 cut(s) 1217, 1383, 2338, 2390
BstNI CCWGG 3 cut(s) 183, 519, 615
BstSCI CCNGG 3 cut(s) 181, 517, 613
BstSFI CTRYAG 3 cut(s) 312, 441, 2146
BstSLI GKGCMC 1 cut(s) 812
BstUI CGCG 1 cut(s) 268
BstV1I GCAGC 5 cut(s) 320, 354, 427, 1763, 2193
BstV2I GAAGAC 1 cut(s) 652
BstX2I RGATCY 3 cut(s) 1321, 1363, 1963
BstYI RGATCY 3 cut(s) 1321, 1363, 1963
BsuI GTATCC 1 cut(s) 1828
BsuRI GGCC 4 cut(s) 186, 287, 1626, 2374
BtgI CCRYGG 1 cut(s) 722
BtsCI GGATG 3 cut(s) 21, 1996, 2467
BtsI GCAGTG 2 cut(s) 1674, 1872
BtsIMutI CAGTG 3 cut(s) 115, 1674, 1872
Cac8I GCNNGC 5 cut(s) 328, 1384, 1426, 2330, 2515
CaiI CAGNNNCTG 1 cut(s) 440
CciI TCATGA 2 cut(s) 1195, 1933
CfoI GCGC 2 cut(s) 160, 640
Cfr13I GGNCC 5 cut(s) 719, 968, 1314, 1625, 2420
Csp6I GTAC 3 cut(s) 749, 1028, 2351
CviAII CATG 9 cut(s) 56, 64, 541, 723, 945, 1196, 1816, 1934, 2241
CviQI GTAC 3 cut(s) 749, 1028, 2351
DdeI CTNAG 7 cut(s) 492, 887, 936, 1537, 1690, 2430, 2458
DinI GGCGCC 1 cut(s) 639
DraI TTTAAA 2 cut(s) 1017, 2323
EaeI YGGCCR 1 cut(s) 285
Eam1104I CTCTTC 3 cut(s) 1667, 1701, 1853
EarI CTCTTC 3 cut(s) 1667, 1701, 1853
Eco130I CCWWGG 1 cut(s) 722
Eco31I GGTCTC 1 cut(s) 1511
Eco47I GGWCC 4 cut(s) 719, 968, 1314, 2420
Eco57I CTGAAG 4 cut(s) 144, 193, 1242, 1565
Eco72I CACGTG 1 cut(s) 2087
EcoRII CCWGG 3 cut(s) 181, 517, 613
EcoT14I CCWWGG 1 cut(s) 722
EcoT22I ATGCAT 2 cut(s) 1285, 2242
EgeI GGCGCC 1 cut(s) 639
EheI GGCGCC 1 cut(s) 639
ErhI CCWWGG 1 cut(s) 722
FaeI CATG 9 cut(s) 59, 67, 544, 726, 948, 1199, 1819, 1937, 2244
FalI AAGNNNNNCTT 4 cut(s) 560, 592, 722, 754
FaqI GGGAC 1 cut(s) 177
FatI CATG 9 cut(s) 55, 63, 540, 722, 944, 1195, 1815, 1933, 2240
FauNDI CATATG 1 cut(s) 483
FbaI TGATCA 2 cut(s) 478, 511
FblI GTMKAC 2 cut(s) 392, 2145
Fnu4HI GCNGC 6 cut(s) 309, 343, 441, 1082, 1777, 2182
FokI GGATG 3 cut(s) 28, 2003, 2454
Fsp4HI GCNGC 6 cut(s) 309, 343, 441, 1082, 1777, 2182
GlaI GCGC 2 cut(s) 159, 639
GluI GCNGC 6 cut(s) 309, 343, 441, 1082, 1777, 2182
GsuI CTGGAG 2 cut(s) 730, 852
HaeII RGCGCY 1 cut(s) 641
HaeIII GGCC 4 cut(s) 186, 287, 1626, 2374
HapII CCGG 1 cut(s) 2102
HhaI GCGC 2 cut(s) 160, 640
Hin1I GRCGYC 1 cut(s) 638
Hin1II CATG 9 cut(s) 59, 67, 544, 726, 948, 1199, 1819, 1937, 2244
Hin6I GCGC 2 cut(s) 158, 638
HinP1I GCGC 2 cut(s) 158, 638
HincII GTYRAC 1 cut(s) 2403
HindII GTYRAC 1 cut(s) 2403
HindIII AAGCTT 3 cut(s) 40, 987, 1828
HinfI GANTC 8 cut(s) 352, 621, 689, 940, 1190, 1472, 1937, 2002
HpaI GTTAAC 1 cut(s) 2403
HpaII CCGG 1 cut(s) 2102
HphI GGTGA 6 cut(s) 506, 533, 603, 1183, 1409, 1891
Hpy166II GTNNAC 8 cut(s) 393, 719, 749, 968, 2146, 2351, 2403, 2423
Hpy188I TCNGA 9 cut(s) 357, 1358, 1390, 1511, 1540, 1968, 2017, 2131, 2140
Hpy8I GTNNAC 8 cut(s) 393, 719, 749, 968, 2146, 2351, 2403, 2423
Hpy99I CGWCG 1 cut(s) 768
HpyAV CCTTC 9 cut(s) 110, 414, 866, 1394, 1651, 1942, 2036, 2252, 2525
HpyCH4III ACNGT 6 cut(s) 119, 153, 337, 529, 651, 1251
HpyCH4IV ACGT 3 cut(s) 109, 1229, 2086
HpyF10VI GCNNNNNNNGC 4 cut(s) 1217, 1383, 2338, 2390
HpyF3I CTNAG 7 cut(s) 492, 887, 936, 1537, 1690, 2430, 2458
HpySE526I ACGT 3 cut(s) 109, 1229, 2086
Hsp92I GRCGYC 1 cut(s) 638
Hsp92II CATG 9 cut(s) 59, 67, 544, 726, 948, 1199, 1819, 1937, 2244
HspAI GCGC 2 cut(s) 158, 638
KasI GGCGCC 1 cut(s) 637
Kpn2I TCCGGA 1 cut(s) 2101
Ksp22I TGATCA 2 cut(s) 478, 511
KspAI GTTAAC 1 cut(s) 2403
LmnI GCTCC 5 cut(s) 65, 488, 959, 1050, 1391
Lsp1109I GCAGC 5 cut(s) 320, 354, 427, 1763, 2193
LweI GCATC 5 cut(s) 6, 348, 1004, 1713, 2424
MaeII ACGT 3 cut(s) 109, 1229, 2086
MaeIII GTNAC 6 cut(s) 521, 551, 651, 947, 1797, 1879
MfeI CAATTG 1 cut(s) 1261
MflI RGATCY 3 cut(s) 1321, 1363, 1963
MhlI GDGCHC 1 cut(s) 812
MlsI TGGCCA 1 cut(s) 287
MluNI TGGCCA 1 cut(s) 287
Mly113I GGCGCC 1 cut(s) 638
MmeI TCCRAC 3 cut(s) 1257, 1336, 2250
Mox20I TGGCCA 1 cut(s) 287
Mph1103I ATGCAT 2 cut(s) 1285, 2242
MroI TCCGGA 1 cut(s) 2101
MroXI GAANNNNTTC 1 cut(s) 2125
MscI TGGCCA 1 cut(s) 287
MseI TTAA 9 cut(s) 800, 1016, 1290, 1418, 1488, 1782, 1890, 2322, 2402
MslI CAYNNNNRTG 2 cut(s) 519, 2522
Msp20I TGGCCA 1 cut(s) 287
MspI CCGG 1 cut(s) 2102
MspR9I CCNGG 3 cut(s) 183, 519, 615
MunI CAATTG 1 cut(s) 1261
MvaI CCWGG 3 cut(s) 183, 519, 615
MvnI CGCG 1 cut(s) 268
MwoI GCNNNNNNNGC 4 cut(s) 1217, 1383, 2338, 2390
NarI GGCGCC 1 cut(s) 638
NcoI CCATGG 1 cut(s) 722
NdeI CATATG 1 cut(s) 483
NheI GCTAGC 1 cut(s) 2513
NlaIII CATG 9 cut(s) 59, 67, 544, 726, 948, 1199, 1819, 1937, 2244
NlaIV GGNNCC 2 cut(s) 61, 639
NmuCI GTSAC 4 cut(s) 521, 651, 947, 1879
NsiI ATGCAT 2 cut(s) 1285, 2242
NspV TTCGAA 1 cut(s) 896
OliI CACNNNNGTG 1 cut(s) 519
PagI TCATGA 2 cut(s) 1195, 1933
PdmI GAANNNNTTC 1 cut(s) 2125
PfeI GAWTC 8 cut(s) 352, 621, 689, 940, 1190, 1472, 1937, 2002
PflFI GACNNNGTC 2 cut(s) 527, 649
PkrI GCNGC 6 cut(s) 310, 344, 442, 1083, 1778, 2183
PluTI GGCGCC 1 cut(s) 641
PmaCI CACGTG 1 cut(s) 2087
PmlI CACGTG 1 cut(s) 2087
Ppu21I YACGTR 1 cut(s) 2087
PsiI TTATAA 1 cut(s) 1635
Psp6I CCWGG 3 cut(s) 181, 517, 613
PspCI CACGTG 1 cut(s) 2087
PspGI CCWGG 3 cut(s) 181, 517, 613
PspN4I GGNNCC 2 cut(s) 61, 639
PspPI GGNCC 5 cut(s) 719, 968, 1314, 1625, 2420
PstI CTGCAG 1 cut(s) 445
PstNI CAGNNNCTG 1 cut(s) 440
PsuI RGATCY 3 cut(s) 1321, 1363, 1963
PsyI GACNNNGTC 2 cut(s) 527, 649
RsaI GTAC 3 cut(s) 750, 1029, 2352
RsaNI GTAC 3 cut(s) 749, 1028, 2351
RseI CAYNNNNRTG 2 cut(s) 519, 2522
SaqAI TTAA 9 cut(s) 800, 1016, 1290, 1418, 1488, 1782, 1890, 2322, 2402
SatI GCNGC 6 cut(s) 309, 343, 441, 1082, 1777, 2182
Sau96I GGNCC 5 cut(s) 719, 968, 1314, 1625, 2420
ScrFI CCNGG 3 cut(s) 183, 519, 615
SduI GDGCHC 1 cut(s) 812
SfaNI GCATC 5 cut(s) 6, 348, 1004, 1713, 2424
SfcI CTRYAG 3 cut(s) 312, 441, 2146
SfoI GGCGCC 1 cut(s) 639
SfuI TTCGAA 1 cut(s) 896
SinI GGWCC 4 cut(s) 719, 968, 1314, 2420
SmiI ATTTAAAT 1 cut(s) 2323
SmiMI CAYNNNNRTG 2 cut(s) 519, 2522
SsiI CCGC 4 cut(s) 266, 1043, 1081, 2384
SspDI GGCGCC 1 cut(s) 637
SspI AATATT 2 cut(s) 1894, 2289
StyD4I CCNGG 3 cut(s) 181, 517, 613
StyI CCWWGG 1 cut(s) 722
SwaI ATTTAAAT 1 cut(s) 2323
TaaI ACNGT 6 cut(s) 119, 153, 337, 529, 651, 1251
TaiI ACGT 3 cut(s) 112, 1232, 2089
TaqI TCGA 3 cut(s) 734, 766, 896
TatI WGTACW 1 cut(s) 2350
TauI GCSGC 1 cut(s) 1084
TfiI GAWTC 8 cut(s) 352, 621, 689, 940, 1190, 1472, 1937, 2002
Tru1I TTAA 9 cut(s) 800, 1016, 1290, 1418, 1488, 1782, 1890, 2322, 2402
Tru9I TTAA 9 cut(s) 800, 1016, 1290, 1418, 1488, 1782, 1890, 2322, 2402
TscAI CASTG 3 cut(s) 122, 1674, 1872
TseFI GTSAC 4 cut(s) 521, 651, 947, 1879
TseI GCWGC 5 cut(s) 308, 342, 440, 1776, 2181
Tsp45I GTSAC 4 cut(s) 521, 651, 947, 1879
TspRI CASTG 3 cut(s) 122, 1674, 1872
Tth111I GACNNNGTC 2 cut(s) 527, 649
VpaK11BI GGWCC 4 cut(s) 719, 968, 1314, 2420
XapI RAATTY 4 cut(s) 298, 978, 2010, 2494
XbaI TCTAGA 1 cut(s) 2056
XmiI GTMKAC 2 cut(s) 392, 2145
XmnI GAANNNNTTC 1 cut(s) 2125
Zsp2I ATGCAT 2 cut(s) 1285, 2242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.