Rorug01G0215800

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Forward (+)
30817994 .. 30821104
3111 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0215800.1

Sequence Viewer

Length: 2478 bp
ATGGCCGCCAAACCCATTTCCCGGCGACCAGCCTTAACAGTTCTCCGACAGCAATTCCTCAGGCCCAACCGCAGCTCCAAACCTTTTCCTCCTCTCAGGTACGCCTCTCCTTCTCAAATTTCACTTCTTCTCAACCCATCATCATCTCCAATCCCCAGGTCCTCCGATGCCGAAAAGCCCAAATCCCAAGGCAGCAAAACCGCCAAAGCCATGGCGTCACTCATCAACTCCAACCCATGGTCATCTCACCTCCAGTCTTCTCTCTCTTCTCTCTCTCCCTCCATCTCCACCACCACCGTCTCCCAGACCCTCCGCCGCATCAAAACTCCAACCCAAGCCCTCAAGTTCTTCAACTGGGCCGAAGCAATGGGCTTCTCCCACAACGCCCAATCCTTCTTCATGTTGCTTGAGATCTTCGGCCGGAACCGGAATCTCAATGCCGCTAGAAATCTCTTGTTTTCGATTGAGAAGAGGTCCAATGGGAAGGTTAAGCTCGAGGACCGGTTTTTTAATAGCTTGATTAGGAGCTATGGGGATGCAGGGTTGTTTCAGGAGTCTGTGAAGCTTTTTGGGACGATGAAAACGATGGGGATATCGGCTTCTGTTGTTAGTTTCAATAGTTTGCTTTCGATTTTGCTTAAGAGGGGTAGGACTAGTCTGGCTAAGAATGTTTATGATGAAATGCTTGGAATGTATGGAGTTACGCCGGATACGCATACGTTTAATATTTTGATTAGAGGGTTCTGTCTGAACTCCATGGTTGATGAGGGGTTTCATTATTTTAAGGAAATGTCGAGGTTGAAATGTGAGCCGGATGTGGTTACTTATAATACGATTGTTGATGGGTTGTGTAGAGCAGGGAAGGTTGAGATTGCGCGAAATGTGGTGAAGGGGATGAGGAAGAGAAGTGGGGAGTTGAATCCGAATGTTGTTACTTATACGACATTGATTAGAGGGTATTGTGTGAAAGAAGATGTTGATGAGGCTTTGTGTGTTTTGGAGGAGATGAGTAGTCAAGGGTTGAAACCAAATGAAATTACCTATAATACTCTGCTTAAAGGGCTTTGTGAAGCAAAGAAGCTAGATAAGGTAAAAGAAGTCTTGGAGGGAACAATGAGAGGTGAAGGATTTACTCCTGATACGTGTACGTTAAACACGCTGATGCATTCGCATTGCAATGCAGGAAACTTAGAGGAAGCATTTAAGGTTTTCACAATGATGTCAGAGTTACAGGTCCCTCCAGATTCAGCTACATACAGCGTTTTGATACGCAGTTTGTGTCAACGAAGGGATTATGGTAAAGCTGAGGAGTTGTTTGATGAGCTATCCAAGAAACAAATCTTGTTAAGTGATCATGGCTGTACACCTGTTGTTGCCTCATACAAACCTATCTTTGAGTACTTATGTAGTAATGGGAGAACTAAGAAAGCAGATGAAGTGTTTAGGCAGCTACTGAAAAGAGGAACACAAGATCCTCCATCCTACAAGACTTTGATCATGGGCCACTGTAGGGAAGGCACATTTGAAGCTGGGTACAAACTCCTAGTCTTGATGCTTAGAAGGGATTATGTTCCTGATGTCGAGATTTATGATTCCTTGATTGATGGTCTGTTGGAAAAGGGTAAGCCCCTTCTTGCACAACAGACTCTAGAGAAGATGCTGAAGAGCTCTCATCTCCCAGAAACATCTACTTTCCATTCTATACTGGCAGCTCTTTTAGAAATGCATTGTGCCCGTGAATCTGCAAGCTTTGTTATTTTAATGTTGGAGAAAAACATTAGACAAAATATTAACCTCTCAACAGATCTTATAAGGCTTCTTTTCAGTGAGGGATTGCGAGATAAAGCATTTGAGATTGTAGGGATGCTGTATGATAACGGATACTCGATTAAAATAGAAGAAGTGGTCAGTTTCCTTTACCAGAGCAGAAAGCTAATAGAGGCATGTGAAATATTGCGATTTAGTCTGCGGAAGCAAGAAAATGTCAGTATTGATATATTTGACCAAGTTATATTAGGGCTATGTAATATCAATAAGCTTCGAGAAGCATTTGGCTTGTACCATGAATTAATTGAGAATGGCGACCACCAGCAGTTGCCGTGCTTACATCATTTAAAGTCTTCCCTAGAGGTTGCAGGTAGATCAGTTGAAGCTGACTTTGTCTCTAAAAGAATGCCAAAACATCAGCTGGTGAACAAATCTGGGAAGTCAAGACCTCAACTAACTGTTAAACAAGTTTCAAGGATCCCAATTGATTTTGTAGACCCCTATGGTGTTCTTAACATCAGTCTTGCAGATCTAGAAGACCATGCTGTACAGAGTGCTGATGTAATTCTTCTCAACATTGGGAATGCCGGAATGGGCTATCCGGGTTGTTATAGTCCTTCAGAGTTGGCTGAACAGTTCTTCACATCAAGATACGTTCTTCGCTTGGTACAGCATATCAAGACCTTCTCAGTTGCCCAAAGATTCTGGTAA

Protein Analysis

825

Amino Acids

92.92

Weight (kDa)

8.97

Isoelectric Point (pI)

49.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 201 - 249 2.5e-12 PPR repeat family
PPR_long PF17177 223 - 371 1.6e-13 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 233 - 265 2.9e-08 PPR repeat
PPR_2 PF13041 236 - 285 1.9e-15 PPR repeat family
PPR_1 PF12854 269 - 300 2.5e-12 PPR repeat
PPR_2 PF13041 271 - 304 1.7e-07 PPR repeat family
TPR_24 PF23276 285 - 383 8.2e-07 Fungal tetratrico peptide repeats
PPR_1 PF12854 306 - 337 6e-11 PPR repeat
PPR_3 PF13812 306 - 353 8.9e-11 Pentatricopeptide repeat domain
PPR_2 PF13041 308 - 356 1.7e-19 PPR repeat family
PPR PF01535 311 - 341 1.6e-07 PPR repeat
PPR_1 PF12854 340 - 368 1.1e-07 PPR repeat
PPR_3 PF13812 372 - 424 1.5e-06 Pentatricopeptide repeat domain
PPR_1 PF12854 376 - 407 8.3e-10 PPR repeat
PPR_2 PF13041 379 - 428 7.8e-16 PPR repeat family
PPR_1 PF12854 412 - 441 6.7e-06 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 828, 1811
Acc36I ACCTGC 1 cut(s) 2126
AccB7I CCANNNNNTGG 1 cut(s) 237
AccI GTMKAC 1 cut(s) 2262
AccII CGCG 1 cut(s) 877
AciI CCGC 7 cut(s) 6, 70, 201, 313, 316, 441, 1969
AclWI GGATC 3 cut(s) 1466, 2239, 2252
AcoI YGGCCR 2 cut(s) 3, 418
AcsI RAATTY 1 cut(s) 117
AcuI CTGAAG 2 cut(s) 1682, 2370
AcyI GRCGYC 1 cut(s) 215
AfaI GTAC 8 cut(s) 101, 1147, 1363, 1400, 1535, 2060, 2316, 2436
AfiI CCNNNNNNNGG 3 cut(s) 21, 237, 1510
AflII CTTAAG 1 cut(s) 638
AflIII ACRYGT 1 cut(s) 1142
AgeI ACCGGT 1 cut(s) 501
AgsI TTSAA 8 cut(s) 352, 616, 802, 919, 1024, 1526, 2150, 2241
AhlI ACTAGT 1 cut(s) 653
AjnI CCWGG 1 cut(s) 155
AloI GAACNNNNNNTCC 2 cut(s) 1456, 1488
Alw21I GWGCWC 1 cut(s) 1670
Alw26I GTCTC 2 cut(s) 304, 2167
AlwI GGATC 3 cut(s) 1466, 2239, 2252
AlwNI CAGNNNCTG 1 cut(s) 1453
Ama87I CYCGRG 1 cut(s) 494
AoxI GGCC 5 cut(s) 3, 62, 357, 418, 1501
ApeKI GCWGC 4 cut(s) 72, 192, 1447, 1709
ApoI RAATTY 1 cut(s) 117
ArsI GACNNNNNNTTYG 2 cut(s) 1530, 1562
AseI ATTAAT 1 cut(s) 2069
AsiGI ACCGGT 1 cut(s) 501
AspLEI GCGC 1 cut(s) 877
AspS9I GGNCC 7 cut(s) 63, 159, 357, 474, 499, 1234, 1501
AsuC2I CCSGG 2 cut(s) 22, 2370
AsuHPI GGTGA 4 cut(s) 239, 898, 1133, 2203
AvaI CYCGRG 1 cut(s) 494
AvaII GGWCC 4 cut(s) 159, 474, 499, 1234
AxyI CCTNAGG 1 cut(s) 59
BaeGI GKGCMC 1 cut(s) 1735
BamHI GGATCC 1 cut(s) 2244
BanII GRGCYC 1 cut(s) 1670
BbsI GAAGAC 3 cut(s) 249, 2112, 2310
Bbv12I GWGCWC 1 cut(s) 1670
BbvCI CCTCAGC 1 cut(s) 1305
BbvI GCAGC 4 cut(s) 84, 204, 1459, 1721
BccI CCATC 6 cut(s) 145, 290, 580, 836, 1486, 1598
BceAI ACGGC 1 cut(s) 2083
BciT130I CCWGG 1 cut(s) 157
BciVI GTATCC 2 cut(s) 703, 1874
BclI TGATCA 2 cut(s) 1351, 1494
BcnI CCSGG 2 cut(s) 22, 2370
BcoDI GTCTC 2 cut(s) 304, 2167
BcuI ACTAGT 1 cut(s) 653
BfaI CTAG 7 cut(s) 444, 654, 1082, 1544, 1649, 2126, 2300
BfmI CTRYAG 1 cut(s) 1507
BfrI CTTAAG 1 cut(s) 638
BfuAI ACCTGC 1 cut(s) 2126
BfuI GTATCC 2 cut(s) 703, 1874
BglII AGATCT 3 cut(s) 411, 1804, 2296
BisI GCNGC 7 cut(s) 6, 73, 193, 316, 441, 1448, 1710
BlsI GCNGC 7 cut(s) 7, 74, 194, 317, 442, 1449, 1711
BmcAI AGTACT 1 cut(s) 1400
Bme1390I CCNGG 3 cut(s) 22, 157, 2370
Bme18I GGWCC 4 cut(s) 159, 474, 499, 1234
BmeT110I CYCGRG 1 cut(s) 494
BmgT120I GGNCC 7 cut(s) 63, 159, 357, 474, 499, 1234, 1501
BmiI GGNNCC 3 cut(s) 425, 1236, 2246
BmrFI CCNGG 3 cut(s) 22, 157, 2370
BmrI ACTGGG 1 cut(s) 364
BmsI GCATC 7 cut(s) 157, 327, 526, 1152, 1542, 1647, 1854
BmuI ACTGGG 1 cut(s) 364
BpiI GAAGAC 3 cut(s) 249, 2112, 2310
BpmI CTGGAG 2 cut(s) 236, 1224
Bpu10I CCTNAGC 1 cut(s) 1305
BpuEI CTTGAG 2 cut(s) 326, 428
BpuMI CCSGG 2 cut(s) 22, 2370
BsaAI YACGTR 1 cut(s) 1143
BsaHI GRCGYC 1 cut(s) 215
BsaJI CCNNGG 5 cut(s) 155, 187, 210, 236, 756
BsaWI WCCGGW 2 cut(s) 426, 501
BsaXI ACNNNNNCTCC 2 cut(s) 59, 89
Bsc4I CCNNNNNNNGG 3 cut(s) 21, 237, 1510
Bse118I RCCGGY 1 cut(s) 501
Bse1I ACTGG 3 cut(s) 253, 359, 1710
Bse21I CCTNAGG 1 cut(s) 59
Bse3DI GCAATG 3 cut(s) 372, 1171, 1183
BseBI CCWGG 1 cut(s) 157
BseDI CCNNGG 5 cut(s) 155, 187, 210, 236, 756
BseGI GGATG 5 cut(s) 541, 820, 900, 1478, 1869
BseLI CCNNNNNNNGG 3 cut(s) 21, 237, 1510
BseMI GCAATG 3 cut(s) 372, 1171, 1183
BseMII CTCAG 4 cut(s) 73, 109, 1296, 2469
BseNI ACTGG 3 cut(s) 253, 359, 1710
BseRI GAGGAG 3 cut(s) 81, 1016, 1322
BseSI GKGCMC 1 cut(s) 1735
BseX3I CGGCCG 1 cut(s) 418
BseXI GCAGC 4 cut(s) 84, 204, 1459, 1721
BseYI CCCAGC 1 cut(s) 1529
Bsh1236I CGCG 1 cut(s) 877
Bsh1285I CGRYCG 1 cut(s) 421
BshFI GGCC 5 cut(s) 5, 64, 359, 420, 1503
BshTI ACCGGT 1 cut(s) 501
BsiEI CGRYCG 1 cut(s) 421
BsiHKAI GWGCWC 1 cut(s) 1670
BsiHKCI CYCGRG 1 cut(s) 494
BsiSI CCGG 8 cut(s) 22, 421, 427, 502, 707, 812, 2355, 2369
BslFI GGGAC 2 cut(s) 586, 1220
BslI CCNNNNNNNGG 3 cut(s) 21, 237, 1510
BsmAI GTCTC 2 cut(s) 304, 2167
BsmBI CGTCTC 1 cut(s) 304
BsmFI GGGAC 2 cut(s) 586, 1220
BsmI GAATGC 3 cut(s) 1165, 2178, 2356
BsnI GGCC 5 cut(s) 5, 64, 359, 420, 1503
BsoBI CYCGRG 1 cut(s) 494
Bsp1286I GDGCHC 2 cut(s) 1670, 1735
Bsp1407I TGTACA 2 cut(s) 1361, 2314
Bsp143I GATC 8 cut(s) 411, 1351, 1471, 1494, 1804, 2141, 2244, 2296
Bsp19I CCATGG 3 cut(s) 210, 236, 756
BspACI CCGC 7 cut(s) 6, 70, 201, 313, 316, 441, 1969
BspANI GGCC 5 cut(s) 5, 64, 359, 420, 1503
BspCNI CTCAG 4 cut(s) 72, 108, 1297, 2468
BspFNI CGCG 1 cut(s) 877
BspLI GGNNCC 3 cut(s) 425, 1236, 2246
BspMI ACCTGC 1 cut(s) 2126
BspPI GGATC 3 cut(s) 1466, 2239, 2252
BspQI GCTCTTC 1 cut(s) 1658
BspTI CTTAAG 1 cut(s) 638
BsrDI GCAATG 3 cut(s) 372, 1171, 1183
BsrFI RCCGGY 1 cut(s) 501
BsrGI TGTACA 2 cut(s) 1361, 2314
BsrI ACTGG 3 cut(s) 253, 359, 1710
BssAI RCCGGY 1 cut(s) 501
BssECI CCNNGG 5 cut(s) 155, 187, 210, 236, 756
BssMI GATC 8 cut(s) 411, 1351, 1471, 1494, 1804, 2141, 2244, 2296
BssNI GRCGYC 1 cut(s) 215
BssT1I CCWWGG 4 cut(s) 187, 210, 236, 756
Bst2UI CCWGG 1 cut(s) 157
Bst4CI ACNGT 5 cut(s) 40, 298, 1508, 2227, 2403
Bst6I CTCTTC 4 cut(s) 271, 464, 896, 1658
BstACI GRCGYC 1 cut(s) 215
BstAFI CTTAAG 1 cut(s) 638
BstAUI TGTACA 2 cut(s) 1361, 2314
BstBAI YACGTR 1 cut(s) 1143
BstC8I GCNNGC 1 cut(s) 1747
BstDEI CTNAG 8 cut(s) 59, 95, 663, 1189, 1305, 1422, 1556, 2455
BstDSI CCRYGG 3 cut(s) 210, 236, 756
BstF5I GGATG 5 cut(s) 541, 820, 900, 1478, 1869
BstFNI CGCG 1 cut(s) 877
BstHHI GCGC 1 cut(s) 877
BstKTI GATC 8 cut(s) 414, 1354, 1474, 1497, 1807, 2144, 2247, 2299
BstMAI GTCTC 2 cut(s) 304, 2167
BstMBI GATC 8 cut(s) 411, 1351, 1471, 1494, 1804, 2141, 2244, 2296
BstMCI CGRYCG 1 cut(s) 421
BstMWI GCNNNNNNNGC 2 cut(s) 712, 1060
BstNI CCWGG 1 cut(s) 157
BstNSI RCATGY 1 cut(s) 1947
BstSCI CCNGG 3 cut(s) 20, 155, 2368
BstSFI CTRYAG 1 cut(s) 1507
BstSLI GKGCMC 1 cut(s) 1735
BstUI CGCG 1 cut(s) 877
BstV1I GCAGC 4 cut(s) 84, 204, 1459, 1721
BstV2I GAAGAC 3 cut(s) 249, 2112, 2310
BstX2I RGATCY 5 cut(s) 411, 1471, 1804, 2244, 2296
BstXI CCANNNNNNTGG 1 cut(s) 211
BstYI RGATCY 5 cut(s) 411, 1471, 1804, 2244, 2296
BstZI CGGCCG 1 cut(s) 418
Bsu36I CCTNAGG 1 cut(s) 59
BsuI GTATCC 2 cut(s) 703, 1874
BsuRI GGCC 5 cut(s) 5, 64, 359, 420, 1503
BtgI CCRYGG 3 cut(s) 210, 236, 756
BtsCI GGATG 5 cut(s) 541, 820, 900, 1478, 1869
BtsIMutI CAGTG 2 cut(s) 1504, 1831
BveI ACCTGC 1 cut(s) 2126
Cac8I GCNNGC 1 cut(s) 1747
CaiI CAGNNNCTG 1 cut(s) 1453
CfoI GCGC 1 cut(s) 877
Cfr10I RCCGGY 1 cut(s) 501
Cfr13I GGNCC 7 cut(s) 63, 159, 357, 474, 499, 1234, 1501
CseI GACGC 1 cut(s) 204
Csp6I GTAC 8 cut(s) 100, 1146, 1362, 1399, 1534, 2059, 2315, 2435
CspAI ACCGGT 1 cut(s) 501
CviAII CATG 9 cut(s) 211, 237, 400, 757, 1355, 1498, 1944, 2063, 2309
CviQI GTAC 8 cut(s) 100, 1146, 1362, 1399, 1534, 2059, 2315, 2435
DdeI CTNAG 8 cut(s) 59, 95, 663, 1189, 1305, 1422, 1556, 2455
DpnI GATC 8 cut(s) 413, 1353, 1473, 1496, 1806, 2143, 2246, 2298
DpnII GATC 8 cut(s) 411, 1351, 1471, 1494, 1804, 2141, 2244, 2296
DraI TTTAAA 1 cut(s) 2115
EaeI YGGCCR 2 cut(s) 3, 418
EagI CGGCCG 1 cut(s) 418
Eam1104I CTCTTC 4 cut(s) 271, 464, 896, 1658
EarI CTCTTC 4 cut(s) 271, 464, 896, 1658
EciI GGCGGA 1 cut(s) 302
Ecl136II GAGCTC 1 cut(s) 1668
EclXI CGGCCG 1 cut(s) 418
Eco130I CCWWGG 4 cut(s) 187, 210, 236, 756
Eco24I GRGCYC 1 cut(s) 1670
Eco32I GATATC 1 cut(s) 594
Eco47I GGWCC 4 cut(s) 159, 474, 499, 1234
Eco52I CGGCCG 1 cut(s) 418
Eco53kI GAGCTC 1 cut(s) 1668
Eco57I CTGAAG 2 cut(s) 1682, 2370
Eco81I CCTNAGG 1 cut(s) 59
Eco88I CYCGRG 1 cut(s) 494
EcoICRI GAGCTC 1 cut(s) 1668
EcoO109I RGGNCCY 2 cut(s) 159, 1234
EcoRII CCWGG 1 cut(s) 155
EcoRV GATATC 1 cut(s) 594
EcoT14I CCWWGG 4 cut(s) 187, 210, 236, 756
EcoT22I ATGCAT 2 cut(s) 1167, 1728
EcoT38I GRGCYC 1 cut(s) 1670
ErhI CCWWGG 4 cut(s) 187, 210, 236, 756
Esp3I CGTCTC 1 cut(s) 304
FaeI CATG 9 cut(s) 214, 240, 403, 760, 1358, 1501, 1947, 2066, 2312
FaqI GGGAC 2 cut(s) 586, 1220
FatI CATG 9 cut(s) 210, 236, 399, 756, 1354, 1497, 1943, 2062, 2308
FbaI TGATCA 2 cut(s) 1351, 1494
FblI GTMKAC 1 cut(s) 2262
Fnu4HI GCNGC 7 cut(s) 6, 73, 193, 316, 441, 1448, 1710
FokI GGATG 5 cut(s) 548, 827, 907, 1465, 1876
FriOI GRGCYC 1 cut(s) 1670
Fsp4HI GCNGC 7 cut(s) 6, 73, 193, 316, 441, 1448, 1710
FspBI CTAG 7 cut(s) 444, 654, 1082, 1544, 1649, 2126, 2300
GlaI GCGC 1 cut(s) 876
GluI GCNGC 7 cut(s) 6, 73, 193, 316, 441, 1448, 1710
GsaI CCCAGC 1 cut(s) 1533
GsuI CTGGAG 2 cut(s) 236, 1224
HaeIII GGCC 5 cut(s) 5, 64, 359, 420, 1503
HapII CCGG 8 cut(s) 22, 421, 427, 502, 707, 812, 2355, 2369
HgaI GACGC 1 cut(s) 204
HhaI GCGC 1 cut(s) 877
Hin1I GRCGYC 1 cut(s) 215
Hin1II CATG 9 cut(s) 214, 240, 403, 760, 1358, 1501, 1947, 2066, 2312
Hin6I GCGC 1 cut(s) 875
HinP1I GCGC 1 cut(s) 875
HincII GTYRAC 1 cut(s) 1283
HindII GTYRAC 1 cut(s) 1283
HindIII AAGCTT 3 cut(s) 563, 1747, 2036
HinfI GANTC 8 cut(s) 430, 554, 919, 1244, 1592, 1645, 1739, 2469
HpaII CCGG 8 cut(s) 22, 421, 427, 502, 707, 812, 2355, 2369
HphI GGTGA 4 cut(s) 239, 898, 1133, 2203
Hpy166II GTNNAC 5 cut(s) 1146, 1283, 1364, 2194, 2263
Hpy188I TCNGA 6 cut(s) 47, 166, 750, 924, 1225, 2389
Hpy8I GTNNAC 5 cut(s) 1146, 1283, 1364, 2194, 2263
HpyCH4III ACNGT 5 cut(s) 40, 298, 1508, 2227, 2403
HpyCH4IV ACGT 4 cut(s) 719, 1142, 1148, 2421
HpyCH4V TGCA 9 cut(s) 539, 1165, 1176, 1181, 1637, 1726, 1745, 2135, 2294
HpyF10VI GCNNNNNNNGC 2 cut(s) 712, 1060
HpyF3I CTNAG 8 cut(s) 59, 95, 663, 1189, 1305, 1422, 1556, 2455
HpySE526I ACGT 4 cut(s) 719, 1142, 1148, 2421
Hsp92I GRCGYC 1 cut(s) 215
Hsp92II CATG 9 cut(s) 214, 240, 403, 760, 1358, 1501, 1947, 2066, 2312
HspAI GCGC 1 cut(s) 875
Ksp22I TGATCA 2 cut(s) 1351, 1494
Kzo9I GATC 8 cut(s) 411, 1351, 1471, 1494, 1804, 2141, 2244, 2296
LguI GCTCTTC 1 cut(s) 1658
LmnI GCTCC 2 cut(s) 80, 525
Lsp1109I GCAGC 4 cut(s) 84, 204, 1459, 1721
LweI GCATC 7 cut(s) 157, 327, 526, 1152, 1542, 1647, 1854
MaeI CTAG 7 cut(s) 444, 654, 1082, 1544, 1649, 2126, 2300
MaeII ACGT 4 cut(s) 719, 1142, 1148, 2421
MaeIII GTNAC 5 cut(s) 216, 700, 820, 931, 1227
MalI GATC 8 cut(s) 413, 1353, 1473, 1496, 1806, 2143, 2246, 2298
MboI GATC 8 cut(s) 411, 1351, 1471, 1494, 1804, 2141, 2244, 2296
MfeI CAATTG 1 cut(s) 2250
MflI RGATCY 5 cut(s) 411, 1471, 1804, 2244, 2296
MhlI GDGCHC 2 cut(s) 1670, 1735
MluCI AATT 7 cut(s) 53, 117, 1035, 2066, 2070, 2250, 2331
MlyI GAGTC 2 cut(s) 563, 1639
MmeI TCCRAC 5 cut(s) 70, 255, 353, 1593, 1746
Mph1103I ATGCAT 2 cut(s) 1167, 1728
MslI CAYNNNNRTG 3 cut(s) 1160, 1176, 1217
MspA1I CMGCKG 1 cut(s) 2188
MspCI CTTAAG 1 cut(s) 638
MspI CCGG 8 cut(s) 22, 421, 427, 502, 707, 812, 2355, 2369
MspR9I CCNGG 3 cut(s) 22, 157, 2370
MunI CAATTG 1 cut(s) 2250
Mva1269I GAATGC 3 cut(s) 1165, 2178, 2356
MvaI CCWGG 1 cut(s) 157
MvnI CGCG 1 cut(s) 877
MwoI GCNNNNNNNGC 2 cut(s) 712, 1060
NciI CCSGG 2 cut(s) 22, 2370
NcoI CCATGG 3 cut(s) 210, 236, 756
NdeII GATC 8 cut(s) 411, 1351, 1471, 1494, 1804, 2141, 2244, 2296
NlaIII CATG 9 cut(s) 214, 240, 403, 760, 1358, 1501, 1947, 2066, 2312
NlaIV GGNNCC 3 cut(s) 425, 1236, 2246
NmuCI GTSAC 1 cut(s) 216
NsiI ATGCAT 2 cut(s) 1167, 1728
NspI RCATGY 1 cut(s) 1947
PaeR7I CTCGAG 1 cut(s) 494
PciSI GCTCTTC 1 cut(s) 1658
PcsI WCGNNNNNNNCGW 1 cut(s) 581
PctI GAATGC 3 cut(s) 1165, 2178, 2356
PfeI GAWTC 6 cut(s) 430, 919, 1244, 1592, 1739, 2469
PflFI GACNNNGTC 1 cut(s) 2159
PflMI CCANNNNNTGG 1 cut(s) 237
PinAI ACCGGT 1 cut(s) 501
PkrI GCNGC 7 cut(s) 7, 74, 194, 317, 442, 1449, 1711
PleI GAGTC 2 cut(s) 562, 1639
PpsI GAGTC 2 cut(s) 562, 1639
Ppu21I YACGTR 1 cut(s) 1143
PpuMI RGGWCCY 2 cut(s) 159, 1234
PshBI ATTAAT 1 cut(s) 2069
PsiI TTATAA 2 cut(s) 828, 1811
Psp124BI GAGCTC 1 cut(s) 1670
Psp5II RGGWCCY 2 cut(s) 159, 1234
Psp6I CCWGG 1 cut(s) 155
PspFI CCCAGC 1 cut(s) 1529
PspGI CCWGG 1 cut(s) 155
PspN4I GGNNCC 3 cut(s) 425, 1236, 2246
PspPI GGNCC 7 cut(s) 63, 159, 357, 474, 499, 1234, 1501
PspPPI RGGWCCY 2 cut(s) 159, 1234
PspXI VCTCGAGB 1 cut(s) 494
PstNI CAGNNNCTG 1 cut(s) 1453
PsuI RGATCY 5 cut(s) 411, 1471, 1804, 2244, 2296
PsyI GACNNNGTC 1 cut(s) 2159
PvuII CAGCTG 1 cut(s) 2188
RsaI GTAC 8 cut(s) 101, 1147, 1363, 1400, 1535, 2060, 2316, 2436
RsaNI GTAC 8 cut(s) 100, 1146, 1362, 1399, 1534, 2059, 2315, 2435
RseI CAYNNNNRTG 3 cut(s) 1160, 1176, 1217
SacI GAGCTC 1 cut(s) 1670
SapI GCTCTTC 1 cut(s) 1658
SatI GCNGC 7 cut(s) 6, 73, 193, 316, 441, 1448, 1710
Sau3AI GATC 8 cut(s) 411, 1351, 1471, 1494, 1804, 2141, 2244, 2296
Sau96I GGNCC 7 cut(s) 63, 159, 357, 474, 499, 1234, 1501
ScaI AGTACT 1 cut(s) 1400
SchI GAGTC 2 cut(s) 563, 1639
ScrFI CCNGG 3 cut(s) 22, 157, 2370
SduI GDGCHC 2 cut(s) 1670, 1735
SfaNI GCATC 7 cut(s) 157, 327, 526, 1152, 1542, 1647, 1854
SfcI CTRYAG 1 cut(s) 1507
Sfr274I CTCGAG 1 cut(s) 494
SinI GGWCC 4 cut(s) 159, 474, 499, 1234
SlaI CTCGAG 1 cut(s) 494
SmiMI CAYNNNNRTG 3 cut(s) 1160, 1176, 1217
SmlI CTYRAG 4 cut(s) 341, 407, 494, 638
SmoI CTYRAG 4 cut(s) 341, 407, 494, 638
SpeI ACTAGT 1 cut(s) 653
Sse9I AATT 7 cut(s) 53, 117, 1035, 2066, 2070, 2250, 2331
SsiI CCGC 7 cut(s) 6, 70, 201, 313, 316, 441, 1969
SspI AATATT 3 cut(s) 727, 1789, 1953
SspMI CTAG 7 cut(s) 444, 654, 1082, 1544, 1649, 2126, 2300
SstI GAGCTC 1 cut(s) 1670
StyD4I CCNGG 3 cut(s) 20, 155, 2368
StyI CCWWGG 4 cut(s) 187, 210, 236, 756
TaaI ACNGT 5 cut(s) 40, 298, 1508, 2227, 2403
TaiI ACGT 4 cut(s) 722, 1145, 1151, 2424
TaqI TCGA 7 cut(s) 461, 495, 629, 794, 1581, 1886, 2041
TasI AATT 7 cut(s) 53, 117, 1035, 2066, 2070, 2250, 2331
TatI WGTACW 3 cut(s) 1361, 1398, 2314
TauI GCSGC 3 cut(s) 8, 318, 443
TfiI GAWTC 6 cut(s) 430, 919, 1244, 1592, 1739, 2469
TscAI CASTG 2 cut(s) 1511, 1831
TseFI GTSAC 1 cut(s) 216
TseI GCWGC 4 cut(s) 72, 192, 1447, 1709
Tsp45I GTSAC 1 cut(s) 216
TspDTI ATGAA 7 cut(s) 388, 593, 693, 764, 1047, 1449, 2079
TspGWI ACGGA 1 cut(s) 1893
TspRI CASTG 2 cut(s) 1511, 1831
Tth111I GACNNNGTC 1 cut(s) 2159
Van91I CCANNNNNTGG 1 cut(s) 237
Vha464I CTTAAG 1 cut(s) 638
VpaK11BI GGWCC 4 cut(s) 159, 474, 499, 1234
VspI ATTAAT 1 cut(s) 2069
XapI RAATTY 1 cut(s) 117
XbaI TCTAGA 2 cut(s) 1648, 2299
XceI RCATGY 1 cut(s) 1947
XhoI CTCGAG 1 cut(s) 494
XmiI GTMKAC 1 cut(s) 2262
XspI CTAG 7 cut(s) 444, 654, 1082, 1544, 1649, 2126, 2300
ZrmI AGTACT 1 cut(s) 1400
Zsp2I ATGCAT 2 cut(s) 1167, 1728
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.