Prupe.4G033000_v2.0.a1

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000033
Physical Location & Seq
Reverse (-)
1539527 .. 1543491
3965 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G033000.1

Sequence Viewer

Length: 2493 bp
ATGTTCATCCTATTCCTCTTCAGCTTGCTTCTGTCACAGCATTATTGTGCTGAAGTTTATAACATATCTTCTTCACAACCATTAGCACAGGGACAAACCCTCGTCTCCCCTGGCCGCATTTTTGAATTGGGCTTCTTTAGTCCCAATAATAATTCTGATAATAACAAGTATGTGGGGATATGGCACAAGAACATACTTCCTCGAAAAGTTGTTTGGGTTGCTAACAGAGAAAAGCCTATTGCAGCTGCAGACACCTTGGCTAGTTTGGCAATAAGCAGCAATGGGAATCTGGAGCTTGTAGATGGCAAACAGAATTCTGTTTGGTCAACCAATATGTCAGTGCCATCTAATACTTCAGCTGCAATGCTTTTAGACAGTGGAAACTTTGTTGTCAAAGTCAGTATAGGAGCAGCTCATAAATTGTGGCAGAGCTTTGATTATCCAAGTGACACACTTCTACCAAGCATGCTGCTGGGATTCGATAAAAAATCGGGAAAGAGGAATGTCTTGACTGCCTGGAAAAGTGAGAGTGATCCATCAACTGGGATGTTCTTGGCTGGACTTACACCACAGGTGCCATCACAGTTTGTAATTTGGATGAATGGATCAACTCCCTACTGGAGAACTGGGCCATGGGATAAATCAAAGTTCATCGGGGTACCGATGATGGATGATGAATATCAAAGTGGATATTACCTAGATGATAATGTGCAGCAAGGAAAAAACTATTTTCATTATAATATCCCTGACAAAACTGTGGCATATATAGACATCACTTCAGAAGGTATGTTGAAGCTTATGGATTCCGTAAATGGAGAGAACTGGAGTCTTCACTGGGCAGCACAAAAGAATTCATGTGACAAATACGGAGTATGTGGACCTTTTGGGGTTTGTACAGCTTCTGAGTCTCCAACTCCAATCTGCAAGTGTTTGAAAGGGTTTGTACCTAAGTCACCTGAAGAATGGAGCAAAGGAAACAGGACAGCAGGGTGTATGAGGAAAACGAAATTGTTTTGTGAGAGTAACACTAGCAAGTCAGTCACTTTGAGAGGAAAAGGAGATGGGTTTTCGAAGATGGTACAGTTGAAACCACCAGATTTTCATGAATATATCACGTCTTCGGATGCTGTAGAGTGCAAGATAAAATGCCTAAATAATTGTTCTTGCTTGGCTTATGCATATGTTGATAATATAGGGTGTTTGGCCTGGTCCAAAGACCTTATTGATATACAGGAGTTTTCGTCTGGCGGAGTAGATCTTTTTATTCTCCTAGACCATGCAGATATAGATGAAGGAAATCGAACGAAGTTAATTGTCAGCCTCACAGCTATTGGTTTTATTAGTATCTTGGGTGCAATAGTGTTTGGTTTGTACAGGTTGCGAGCTCACCAAAAGGGAAAAATCAAAGTAACAACAAAGTTCTTTAAATTGACTGATACTACTGAGACTTCAAGAGACACTCTTCAAGAATATATTAGAAACCAAGATCCATCGGAGCTATTCATCTATAATTTTGATAGCATATTAACCGCTACGAACAATTTCAGCATCTCAAACAAACTCGGGGAAGGCGGATTTGGTCCAGTTTACAAGGGTATGCTACAAGAAGGGAAGGAAATAGCGGTAAAAAGACTATCTAGTAGCTCAGGGCAAGGCATAGAAGAGTTCAAAAATGAGACGTTGTTGATCTCCAAGCTCCAACATAAAAATCTTGCTAGGATCATGGGCTGCTGTGTCAAAGAAGATGAGAAGTTACTGATTTATGAGTTCATGCCAAACAGAAGCTTAGACACTCATCTATTTGATCCAGCGCGGAGACCTGAGCTTGATTGGGGCAGACGCTTCAATATTATTCAGGGTGTTGCTAGAGGGCTTCTTTATCTCCACCACGACTCCTATTTGAAGGTAATACATAGAGACTTGAAGGTCAGTAACATTCTCCTGGATGAGAACATGAACCCAAAAATTTCAGATTTTGGATTGGCACGTATCGTTCAAGGGACACAGAATCTAACAAATACTCAGAAGGTTGTGGGAACACTTGGCTATATGTCTCCGGAGTATGCCATGGGCGGGATATTTTCTGAAAAGTCTGATGTCTATAGCTTCGGGGTCTTGATATTGGAGATTATCAGTGGCAGGAAGAACACCAGCTTCTATTACTGTGAACAACATCTAGGTTTCCTAGGTTATGCATGGCACTCATGGAATGAAGGCAGGGGATTGGAGTTGGTTGATGAAACATTGGTAGATTCATATTCCTCATCAGAAGTGATGAGATGTATGCACATTGGGCTTCTTTGTATACAAGACAATGCTGCAGATAGGCCAACCATGCCAGATGTAGTTTTCATGCTAAGTAGCGAGACAGATCGTCGACAACCAAAGGAGCCAATATTTACCTTCCAAAACCCAGTCTCTAGTCCTCAACCACAGTCTGAAAATATTTTCTCAGCAAATGAAGCTACCATGTCAATGATCCAAGGACGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

831

Amino Acids

92.9

Weight (kDa)

6.38

Isoelectric Point (pI)

43.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 60, 738
AasI GACNNNNNNGTC 1 cut(s) 1925
Acc65I GGTACC 1 cut(s) 658
AccB1I GGYRCC 2 cut(s) 574, 658
AccB7I CCANNNNNTGG 1 cut(s) 542
AccI GTMKAC 2 cut(s) 2305, 2377
AccII CGCG 1 cut(s) 1813
AccIII TCCGGA 1 cut(s) 2056
AciI CCGC 7 cut(s) 115, 1248, 1530, 1572, 1622, 1813, 2073
AclWI GGATC 6 cut(s) 527, 613, 1481, 1727, 1799, 2473
AcoI YGGCCR 1 cut(s) 112
AcsI RAATTY 3 cut(s) 313, 850, 1965
AcuI CTGAAG 5 cut(s) 4, 72, 339, 762, 978
AfaI GTAC 5 cut(s) 660, 895, 945, 1080, 1373
AfiI CCNNNNNNNGG 2 cut(s) 542, 2073
AhdI GACNNNNNGTC 1 cut(s) 2373
AjiI CACGTC 1 cut(s) 1116
AjnI CCWGG 4 cut(s) 109, 515, 1205, 1941
AjuI GAANNNNNNNTTGG 4 cut(s) 196, 228, 1560, 1592
Alw21I GWGCWC 1 cut(s) 1387
AlwI GGATC 6 cut(s) 527, 613, 1481, 1727, 1799, 2473
AlwNI CAGNNNCTG 1 cut(s) 902
Ama87I CYCGRG 1 cut(s) 1562
Aor13HI TCCGGA 1 cut(s) 2056
AoxI GGCC 4 cut(s) 112, 629, 1203, 2327
ApoI RAATTY 3 cut(s) 313, 850, 1965
Asp700I GAANNNNTTC 1 cut(s) 1541
Asp718I GGTACC 1 cut(s) 658
AspA2I CCTAGG 1 cut(s) 2185
AspLEI GCGC 1 cut(s) 1813
AspS9I GGNCC 4 cut(s) 629, 878, 1209, 1580
AsuHPI GGTGA 2 cut(s) 945, 1379
AsuII TTCGAA 1 cut(s) 1070
AvaI CYCGRG 1 cut(s) 1562
AvaII GGWCC 3 cut(s) 878, 1209, 1580
AvrII CCTAGG 1 cut(s) 2185
BanI GGYRCC 2 cut(s) 574, 658
BanII GRGCYC 1 cut(s) 1387
BbsI GAAGAC 2 cut(s) 821, 1110
Bbv12I GWGCWC 1 cut(s) 1387
BccI CCATC 8 cut(s) 296, 352, 544, 586, 661, 1055, 1069, 1498
BciT130I CCWGG 4 cut(s) 111, 517, 1207, 1943
BfmI CTRYAG 4 cut(s) 246, 1128, 2101, 2319
BglII AGATCT 1 cut(s) 1255
BlnI CCTAGG 1 cut(s) 2185
Bme1390I CCNGG 4 cut(s) 111, 517, 1207, 1943
Bme18I GGWCC 3 cut(s) 878, 1209, 1580
BmeRI GACNNNNNGTC 1 cut(s) 2373
BmeT110I CYCGRG 1 cut(s) 1562
BmgBI CACGTC 1 cut(s) 1116
BmgT120I GGNCC 4 cut(s) 629, 878, 1209, 1580
BmiI GGNNCC 3 cut(s) 576, 660, 2391
BmrFI CCNGG 4 cut(s) 111, 517, 1207, 1943
BmrI ACTGGG 4 cut(s) 552, 636, 844, 2408
BmsI GCATC 2 cut(s) 1114, 1557
BmuI ACTGGG 4 cut(s) 552, 636, 844, 2408
BpiI GAAGAC 2 cut(s) 821, 1110
BpmI CTGGAG 3 cut(s) 311, 640, 844
Bpu10I CCTNAGC 2 cut(s) 1645, 1821
Bpu14I TTCGAA 1 cut(s) 1070
BsaAI YACGTR 1 cut(s) 1988
BsaBI GATNNNNATC 1 cut(s) 678
BsaI GGTCTC 1 cut(s) 1810
BsaJI CCNNGG 6 cut(s) 109, 255, 632, 2067, 2185, 2482
BsaWI WCCGGW 1 cut(s) 2056
BsaXI ACNNNNNCTCC 4 cut(s) 1226, 1256, 1877, 1907
Bsc4I CCNNNNNNNGG 2 cut(s) 542, 2073
Bse1I ACTGG 7 cut(s) 547, 623, 631, 827, 839, 1583, 2414
Bse3DI GCAATG 2 cut(s) 286, 369
Bse8I GATNNNNATC 1 cut(s) 678
BseAI TCCGGA 1 cut(s) 2056
BseBI CCWGG 4 cut(s) 111, 517, 1207, 1943
BseDI CCNNGG 6 cut(s) 109, 255, 632, 2067, 2185, 2482
BseGI GGATG 6 cut(s) 6, 552, 603, 676, 1129, 1951
BseJI GATNNNNATC 1 cut(s) 678
BseLI CCNNNNNNNGG 2 cut(s) 542, 2073
BseMI GCAATG 2 cut(s) 286, 369
BseMII CTCAG 6 cut(s) 894, 1434, 1659, 1812, 2036, 2466
BseNI ACTGG 7 cut(s) 547, 623, 631, 827, 839, 1583, 2414
BseYI CCCAGC 1 cut(s) 472
BsgI GTGCAG 1 cut(s) 731
Bsh1236I CGCG 1 cut(s) 1813
BshFI GGCC 4 cut(s) 114, 631, 1205, 2329
BshNI GGYRCC 2 cut(s) 574, 658
BsiHKAI GWGCWC 1 cut(s) 1387
BsiHKCI CYCGRG 1 cut(s) 1562
BsiSI CCGG 1 cut(s) 2057
BslFI GGGAC 3 cut(s) 105, 126, 2014
BslI CCNNNNNNNGG 2 cut(s) 542, 2073
BsmBI CGTCTC 2 cut(s) 109, 1670
BsmFI GGGAC 3 cut(s) 105, 126, 2014
BsnI GGCC 4 cut(s) 114, 631, 1205, 2329
Bso31I GGTCTC 1 cut(s) 1810
BsoBI CYCGRG 1 cut(s) 1562
Bsp119I TTCGAA 1 cut(s) 1070
Bsp1286I GDGCHC 1 cut(s) 1387
Bsp13I TCCGGA 1 cut(s) 2056
Bsp1407I TGTACA 2 cut(s) 893, 1371
Bsp143I GATC 9 cut(s) 532, 605, 1255, 1486, 1686, 1719, 1804, 2371, 2478
Bsp19I CCATGG 2 cut(s) 632, 2067
BspACI CCGC 7 cut(s) 115, 1248, 1530, 1572, 1622, 1813, 2073
BspANI GGCC 4 cut(s) 114, 631, 1205, 2329
BspCNI CTCAG 6 cut(s) 895, 1435, 1658, 1813, 2035, 2465
BspEI TCCGGA 1 cut(s) 2056
BspFNI CGCG 1 cut(s) 1813
BspHI TCATGA 1 cut(s) 1102
BspLI GGNNCC 3 cut(s) 576, 660, 2391
BspMAI CTGCAG 2 cut(s) 250, 2323
BspPI GGATC 6 cut(s) 527, 613, 1481, 1727, 1799, 2473
BspT104I TTCGAA 1 cut(s) 1070
BspT107I GGYRCC 2 cut(s) 574, 658
BspTNI GGTCTC 1 cut(s) 1810
BsrDI GCAATG 2 cut(s) 286, 369
BsrGI TGTACA 2 cut(s) 893, 1371
BsrI ACTGG 7 cut(s) 547, 623, 631, 827, 839, 1583, 2414
BssECI CCNNGG 6 cut(s) 109, 255, 632, 2067, 2185, 2482
BssMI GATC 9 cut(s) 532, 605, 1255, 1486, 1686, 1719, 1804, 2371, 2478
BssNAI GTATAC 1 cut(s) 2306
BssT1I CCWWGG 5 cut(s) 255, 632, 2067, 2185, 2482
Bst1107I GTATAC 1 cut(s) 2306
Bst2UI CCWGG 4 cut(s) 111, 517, 1207, 1943
Bst4CI ACNGT 6 cut(s) 377, 585, 757, 1083, 2165, 2436
Bst6I CTCTTC 3 cut(s) 23, 1467, 1656
BstAUI TGTACA 2 cut(s) 893, 1371
BstBAI YACGTR 1 cut(s) 1988
BstBI TTCGAA 1 cut(s) 1070
BstC8I GCNNGC 3 cut(s) 26, 467, 1383
BstDEI CTNAG 9 cut(s) 903, 948, 1443, 1645, 1786, 1821, 2022, 2357, 2452
BstDSI CCRYGG 2 cut(s) 632, 2067
BstF5I GGATG 6 cut(s) 6, 552, 603, 676, 1129, 1951
BstFNI CGCG 1 cut(s) 1813
BstHHI GCGC 1 cut(s) 1813
BstKTI GATC 9 cut(s) 535, 608, 1258, 1489, 1689, 1722, 1807, 2374, 2481
BstMBI GATC 9 cut(s) 532, 605, 1255, 1486, 1686, 1719, 1804, 2371, 2478
BstMWI GCNNNNNNNGC 4 cut(s) 266, 2293, 2335, 2462
BstNI CCWGG 4 cut(s) 111, 517, 1207, 1943
BstNSI RCATGY 1 cut(s) 469
BstSCI CCNGG 4 cut(s) 109, 515, 1205, 1941
BstSFI CTRYAG 4 cut(s) 246, 1128, 2101, 2319
BstUI CGCG 1 cut(s) 1813
BstV2I GAAGAC 2 cut(s) 821, 1110
BstX2I RGATCY 2 cut(s) 1255, 1486
BstYI RGATCY 2 cut(s) 1255, 1486
BstZ17I GTATAC 1 cut(s) 2306
BsuRI GGCC 4 cut(s) 114, 631, 1205, 2329
BtgI CCRYGG 2 cut(s) 632, 2067
BtrI CACGTC 1 cut(s) 1116
BtsCI GGATG 6 cut(s) 6, 552, 603, 676, 1129, 1951
BtsIMutI CAGTG 4 cut(s) 345, 382, 832, 2140
Cac8I GCNNGC 3 cut(s) 26, 467, 1383
CaiI CAGNNNCTG 1 cut(s) 902
CciI TCATGA 1 cut(s) 1102
CfoI GCGC 1 cut(s) 1813
Cfr13I GGNCC 4 cut(s) 629, 878, 1209, 1580
CseI GACGC 1 cut(s) 1848
Csp6I GTAC 5 cut(s) 659, 894, 944, 1079, 1372
CviQI GTAC 5 cut(s) 659, 894, 944, 1079, 1372
DdeI CTNAG 9 cut(s) 903, 948, 1443, 1645, 1786, 1821, 2022, 2357, 2452
DpnI GATC 9 cut(s) 534, 607, 1257, 1488, 1688, 1721, 1806, 2373, 2480
DpnII GATC 9 cut(s) 532, 605, 1255, 1486, 1686, 1719, 1804, 2371, 2478
DraI TTTAAA 1 cut(s) 1426
DrdI GACNNNNNNGTC 1 cut(s) 1925
DriI GACNNNNNGTC 1 cut(s) 2373
DseDI GACNNNNNNGTC 1 cut(s) 1925
EaeI YGGCCR 1 cut(s) 112
Eam1104I CTCTTC 3 cut(s) 23, 1467, 1656
Eam1105I GACNNNNNGTC 1 cut(s) 2373
EarI CTCTTC 3 cut(s) 23, 1467, 1656
EciI GGCGGA 2 cut(s) 1263, 1587
Ecl136II GAGCTC 1 cut(s) 1385
Eco130I CCWWGG 5 cut(s) 255, 632, 2067, 2185, 2482
Eco24I GRGCYC 1 cut(s) 1387
Eco31I GGTCTC 1 cut(s) 1810
Eco47I GGWCC 3 cut(s) 878, 1209, 1580
Eco53kI GAGCTC 1 cut(s) 1385
Eco57I CTGAAG 5 cut(s) 4, 72, 339, 762, 978
Eco88I CYCGRG 1 cut(s) 1562
EcoICRI GAGCTC 1 cut(s) 1385
EcoRI GAATTC 2 cut(s) 313, 850
EcoRII CCWGG 4 cut(s) 109, 515, 1205, 1941
EcoT14I CCWWGG 5 cut(s) 255, 632, 2067, 2185, 2482
EcoT22I ATGCAT 2 cut(s) 1180, 2197
EcoT38I GRGCYC 1 cut(s) 1387
ErhI CCWWGG 5 cut(s) 255, 632, 2067, 2185, 2482
Esp3I CGTCTC 2 cut(s) 109, 1670
FaqI GGGAC 3 cut(s) 105, 126, 2014
FauI CCCGC 1 cut(s) 2066
FauNDI CATATG 1 cut(s) 1180
FblI GTMKAC 2 cut(s) 2305, 2377
FokI GGATG 5 cut(s) 559, 610, 683, 1136, 1958
FriOI GRGCYC 1 cut(s) 1387
GlaI GCGC 1 cut(s) 1812
GsaI CCCAGC 1 cut(s) 476
GsuI CTGGAG 3 cut(s) 311, 640, 844
HaeIII GGCC 4 cut(s) 114, 631, 1205, 2329
HapII CCGG 1 cut(s) 2057
HgaI GACGC 1 cut(s) 1848
HhaI GCGC 1 cut(s) 1813
Hin6I GCGC 1 cut(s) 1811
HinP1I GCGC 1 cut(s) 1811
HincII GTYRAC 2 cut(s) 327, 2378
HindII GTYRAC 2 cut(s) 327, 2378
HindIII AAGCTT 2 cut(s) 794, 1783
HinfI GANTC 8 cut(s) 286, 477, 803, 826, 905, 1892, 2008, 2252
HpaII CCGG 1 cut(s) 2057
HphI GGTGA 2 cut(s) 945, 1379
Hpy166II GTNNAC 6 cut(s) 327, 878, 1588, 2168, 2306, 2378
Hpy188III TCNNGA 8 cut(s) 290, 492, 508, 1103, 1452, 1466, 2057, 2116
Hpy8I GTNNAC 6 cut(s) 327, 878, 1588, 2168, 2306, 2378
Hpy99I CGWCG 1 cut(s) 2379
HpyCH4III ACNGT 6 cut(s) 377, 585, 757, 1083, 2165, 2436
HpyCH4IV ACGT 3 cut(s) 1115, 1679, 1987
HpyF10VI GCNNNNNNNGC 4 cut(s) 266, 2293, 2335, 2462
HpyF3I CTNAG 9 cut(s) 903, 948, 1443, 1645, 1786, 1821, 2022, 2357, 2452
HpySE526I ACGT 3 cut(s) 1115, 1679, 1987
HspAI GCGC 1 cut(s) 1811
Kpn2I TCCGGA 1 cut(s) 2056
KpnI GGTACC 1 cut(s) 662
Kzo9I GATC 9 cut(s) 532, 605, 1255, 1486, 1686, 1719, 1804, 2371, 2478
LmnI GCTCC 6 cut(s) 292, 407, 966, 1495, 1701, 2389
LweI GCATC 2 cut(s) 1114, 1557
MaeII ACGT 3 cut(s) 1115, 1679, 1987
MaeIII GTNAC 9 cut(s) 33, 446, 857, 951, 1022, 1039, 1408, 1752, 1931
MalI GATC 9 cut(s) 534, 607, 1257, 1488, 1688, 1721, 1806, 2373, 2480
MboI GATC 9 cut(s) 532, 605, 1255, 1486, 1686, 1719, 1804, 2371, 2478
MflI RGATCY 2 cut(s) 1255, 1486
MhlI GDGCHC 1 cut(s) 1387
MlyI GAGTC 3 cut(s) 835, 914, 1886
MmeI TCCRAC 2 cut(s) 935, 1723
Mph1103I ATGCAT 2 cut(s) 1180, 2197
MroI TCCGGA 1 cut(s) 2056
MroXI GAANNNNTTC 1 cut(s) 1541
MseI TTAA 3 cut(s) 1310, 1425, 1526
MslI CAYNNNNRTG 2 cut(s) 45, 2474
MspA1I CMGCKG 2 cut(s) 245, 359
MspI CCGG 1 cut(s) 2057
MspR9I CCNGG 4 cut(s) 111, 517, 1207, 1943
MvaI CCWGG 4 cut(s) 111, 517, 1207, 1943
MvnI CGCG 1 cut(s) 1813
MwoI GCNNNNNNNGC 4 cut(s) 266, 2293, 2335, 2462
NcoI CCATGG 2 cut(s) 632, 2067
NdeI CATATG 1 cut(s) 1180
NdeII GATC 9 cut(s) 532, 605, 1255, 1486, 1686, 1719, 1804, 2371, 2478
NlaIV GGNNCC 3 cut(s) 576, 660, 2391
NmuCI GTSAC 5 cut(s) 33, 446, 857, 951, 1039
NsiI ATGCAT 2 cut(s) 1180, 2197
NspI RCATGY 1 cut(s) 469
NspV TTCGAA 1 cut(s) 1070
PaeI GCATGC 1 cut(s) 469
PagI TCATGA 1 cut(s) 1102
PdmI GAANNNNTTC 1 cut(s) 1541
PfeI GAWTC 5 cut(s) 286, 477, 803, 2008, 2252
PflMI CCANNNNNTGG 1 cut(s) 542
PfoI TCCNGGA 1 cut(s) 1941
PleI GAGTC 3 cut(s) 834, 913, 1886
PpsI GAGTC 3 cut(s) 834, 913, 1886
Ppu21I YACGTR 1 cut(s) 1988
PsiI TTATAA 2 cut(s) 60, 738
Psp124BI GAGCTC 1 cut(s) 1387
Psp6I CCWGG 4 cut(s) 109, 515, 1205, 1941
PspFI CCCAGC 1 cut(s) 472
PspGI CCWGG 4 cut(s) 109, 515, 1205, 1941
PspN4I GGNNCC 3 cut(s) 576, 660, 2391
PspPI GGNCC 4 cut(s) 629, 878, 1209, 1580
PstI CTGCAG 2 cut(s) 250, 2323
PstNI CAGNNNCTG 1 cut(s) 902
PsuI RGATCY 2 cut(s) 1255, 1486
PvuII CAGCTG 2 cut(s) 245, 359
RsaI GTAC 5 cut(s) 660, 895, 945, 1080, 1373
RsaNI GTAC 5 cut(s) 659, 894, 944, 1079, 1372
RseI CAYNNNNRTG 2 cut(s) 45, 2474
SacI GAGCTC 1 cut(s) 1387
SalI GTCGAC 1 cut(s) 2376
SaqAI TTAA 3 cut(s) 1310, 1425, 1526
Sau3AI GATC 9 cut(s) 532, 605, 1255, 1486, 1686, 1719, 1804, 2371, 2478
Sau96I GGNCC 4 cut(s) 629, 878, 1209, 1580
SchI GAGTC 3 cut(s) 835, 914, 1886
ScrFI CCNGG 4 cut(s) 111, 517, 1207, 1943
SduI GDGCHC 1 cut(s) 1387
SfaNI GCATC 2 cut(s) 1114, 1557
SfcI CTRYAG 4 cut(s) 246, 1128, 2101, 2319
SfuI TTCGAA 1 cut(s) 1070
SinI GGWCC 3 cut(s) 878, 1209, 1580
SmiMI CAYNNNNRTG 2 cut(s) 45, 2474
SphI GCATGC 1 cut(s) 469
SsiI CCGC 7 cut(s) 115, 1248, 1530, 1572, 1622, 1813, 2073
SspI AATATT 3 cut(s) 1849, 2397, 2446
SstI GAGCTC 1 cut(s) 1387
StyD4I CCNGG 4 cut(s) 109, 515, 1205, 1941
StyI CCWWGG 5 cut(s) 255, 632, 2067, 2185, 2482
TaaI ACNGT 6 cut(s) 377, 585, 757, 1083, 2165, 2436
TaiI ACGT 3 cut(s) 1118, 1682, 1990
TaqI TCGA 5 cut(s) 202, 480, 1070, 1300, 2377
TatI WGTACW 2 cut(s) 893, 1371
TauI GCSGC 1 cut(s) 117
TfiI GAWTC 5 cut(s) 286, 477, 803, 2008, 2252
Tru1I TTAA 3 cut(s) 1310, 1425, 1526
Tru9I TTAA 3 cut(s) 1310, 1425, 1526
TscAI CASTG 4 cut(s) 345, 382, 839, 2140
TseFI GTSAC 5 cut(s) 33, 446, 857, 951, 1039
Tsp45I GTSAC 5 cut(s) 33, 446, 857, 951, 1039
TspGWI ACGGA 2 cut(s) 796, 882
TspRI CASTG 4 cut(s) 345, 382, 839, 2140
Van91I CCANNNNNTGG 1 cut(s) 542
VpaK11BI GGWCC 3 cut(s) 878, 1209, 1580
XapI RAATTY 3 cut(s) 313, 850, 1965
XceI RCATGY 1 cut(s) 469
XmaJI CCTAGG 1 cut(s) 2185
XmiI GTMKAC 2 cut(s) 2305, 2377
XmnI GAANNNNTTC 1 cut(s) 1541
Zsp2I ATGCAT 2 cut(s) 1180, 2197
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.