RchiOBHm_Chr1g0319141

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
6821113 .. 6822724
1612 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54939

Sequence Viewer

Length: 1503 bp
ATGCCATTAATGGATGCTAGAACCAGAAGCGTCTGTGCTTTAAATGGCTCCATGTTCTTCTTCCTTTTGATTTTCTTATTCAGCTTGCTTCCATCCCATTATCATTGCGCTGACGTTGATGAGATAACTCCTTCGCAACCATTAGCGCAAGGGCAGACTCTAGTTTCCCCTGGCCACATTTTTGAGTTGGGCTTCTTCAGTCCTAATAACTCTGCTAACAAGTATGTGGGGATATGGCACAAGGATATATCTCCGCGAAAAGTTGTATGGGTGGCCAACAGAGAAAATCCTCTCGCAGCTACAGACACCTCGGCGAGCTTGACTGTTAGCAGCAAAGGAAATCTGAAGCTTGTTGATGGGAAACAGAAGTCTATTTGGTCTACCAATGTTACTTTTTTGGTGTCATCATTGGATAATAGTTCAGTTGCTGCAGTTCTTTTAGACAATGGAAACTTAGTTGTCAATGATCATCTGGGAGCTGAGTTATGGCAGAGCTTTGATCATCCTGGTGACACAGTCCTGCCAAACATGGTTTTGCGTTATGATAAGTCTGGAAAGGGGAACTTCTTGAGTTCTTGGAGAGCAGAGAATGATCCATCACCAGGGAGATTCTTGATTGGATTGGCTCCACAGACGCCGTCACAAGTGTTCATTTGGATCAATAATGGATCAAATGATTCACATTCAGTTCCTTACTGGAGAAGTGGACCATGGGATAAGTCAAGCTTCATTGGTGTACCAGAAATGGATCATCGATATATAAATGGATTTAGTGTAGATGATAACTTAAAGCAGGGCACGCAGGATTTTTCTTATAGTTTATATGACAAACCTGTGGCATACATATACATATCTCCAGAAGGAATAGTGAGGCTTACATTTTCCAAGAATGATGGGAAGTGGTATGTTTATTGGCAGACACCTAAGAATGCATGTGACATTTATGGAGCTTGTGGACCTTTTGGAGTTTGCAAAGCTTCTGCATCTCCAATCTGTAAGTGTTTGAAAGGTTTTGTACCGAAGTCAAGCGCGCAATGGAGCAAAGGAAACTGGACAGGAGGGTGTGTGAGGCAGACCAAATTGTTTTGTGAGAGACAAACAAATAAGTCAGTCTCATCAAGCGGAAAACAAGTTGATGATGATGGGTTTTGGAAGATGATGAAGTTGAAAATACCAGATTCTCATGAGTTCCTTACTGCTTTCAATGCCGAAGAAACGTCCAACGACTGCAAATTACGGTGCCTAAACAACTGTTCTTGCCTTGCTTATGCATTTGTTAATAATATAGGGTGTTTGGTGTGGTCCAAAGATCTTATTGATATACAGCAGTTTTCGGCATCTGTCGGAGTAGATCTTTATATTCGCCTAGCACGCTCCGAACTAGGTGAAGGAAAGCCAATAAAGTTAATCGCCAGCCTTACAGCTATTGGTTTTGTGAGTATCCTGGTAGCCGTAGTATTCGGATTTTACAGGAGGCAAGCTAACCAGAAGAGTAAGAAATAA

Protein Analysis

500

Amino Acids

55.45

Weight (kDa)

8.62

Isoelectric Point (pI)

35.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 88 - 194 2.8e-29 D-mannose binding lectin
S_locus_glycop PF00954 233 - 342 4.8e-30 S-locus glycoprotein domain
PAN_2 PF08276 379 - 441 3.5e-16 PAN-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1239
AccI GTMKAC 1 cut(s) 380
AccII CGCG 2 cut(s) 256, 1031
AciI CCGC 2 cut(s) 254, 1122
AclWI GGATC 4 cut(s) 587, 665, 676, 756
AcoI YGGCCR 2 cut(s) 172, 273
AcuI CTGAAG 2 cut(s) 181, 365
AcyI GRCGYC 1 cut(s) 635
AfaI GTAC 2 cut(s) 738, 1017
AfiI CCNNNNNNNGG 1 cut(s) 602
AgsI TTSAA 3 cut(s) 1006, 1168, 1204
AjnI CCWGG 4 cut(s) 169, 505, 601, 1443
Alw26I GTCTC 2 cut(s) 1087, 1117
AlwI GGATC 4 cut(s) 587, 665, 676, 756
AlwNI CAGNNNCTG 1 cut(s) 428
AoxI GGCC 2 cut(s) 172, 273
ApeKI GCWGC 3 cut(s) 296, 330, 428
AseI ATTAAT 1 cut(s) 8
AspLEI GCGC 4 cut(s) 110, 148, 1031, 1033
AspS9I GGNCC 3 cut(s) 707, 956, 1302
AsuHPI GGTGA 3 cut(s) 521, 591, 1397
AvaII GGWCC 3 cut(s) 707, 956, 1302
BaeGI GKGCMC 1 cut(s) 800
BalI TGGCCA 2 cut(s) 174, 275
BanI GGYRCC 1 cut(s) 1239
BbvI GCAGC 3 cut(s) 308, 342, 415
BccI CCATC 5 cut(s) 100, 350, 604, 887, 1136
BceAI ACGGC 2 cut(s) 622, 1436
BciT130I CCWGG 4 cut(s) 171, 507, 603, 1445
BciVI GTATCC 1 cut(s) 1451
BclI TGATCA 2 cut(s) 466, 499
BcoDI GTCTC 2 cut(s) 1087, 1117
BfaI CTAG 4 cut(s) 18, 161, 1367, 1382
BfmI CTRYAG 2 cut(s) 300, 429
BfuI GTATCC 1 cut(s) 1451
BglII AGATCT 2 cut(s) 1309, 1351
BisI GCNGC 3 cut(s) 297, 331, 429
BlsI GCNGC 3 cut(s) 298, 332, 430
Bme1390I CCNGG 4 cut(s) 171, 507, 603, 1445
Bme18I GGWCC 3 cut(s) 707, 956, 1302
BmgT120I GGNCC 3 cut(s) 707, 956, 1302
BmiI GGNNCC 3 cut(s) 49, 627, 1241
BmrFI CCNGG 4 cut(s) 171, 507, 603, 1445
BmsI GCATC 3 cut(s) 4, 992, 1346
BpmI CTGGAG 2 cut(s) 718, 840
BpuEI CTTGAG 1 cut(s) 589
Bsa29I ATCGAT 1 cut(s) 754
BsaHI GRCGYC 1 cut(s) 635
BsaJI CCNNGG 4 cut(s) 169, 309, 602, 710
BsaXI ACNNNNNCTCC 2 cut(s) 1050, 1080
Bsc4I CCNNNNNNNGG 1 cut(s) 602
Bse1I ACTGG 2 cut(s) 701, 1055
Bse3DI GCAATG 2 cut(s) 103, 1040
BseBI CCWGG 4 cut(s) 171, 507, 603, 1445
BseCI ATCGAT 1 cut(s) 754
BseDI CCNNGG 4 cut(s) 169, 309, 602, 710
BseGI GGATG 3 cut(s) 19, 92, 502
BseLI CCNNNNNNNGG 1 cut(s) 602
BseMI GCAATG 2 cut(s) 103, 1040
BseMII CTCAG 1 cut(s) 471
BseNI ACTGG 2 cut(s) 701, 1055
BsePI GCGCGC 1 cut(s) 1029
BseSI GKGCMC 1 cut(s) 800
BseXI GCAGC 3 cut(s) 308, 342, 415
Bsh1236I CGCG 2 cut(s) 256, 1031
BshFI GGCC 2 cut(s) 174, 275
BshNI GGYRCC 1 cut(s) 1239
BshVI ATCGAT 1 cut(s) 754
BslI CCNNNNNNNGG 1 cut(s) 602
BsmAI GTCTC 2 cut(s) 1087, 1117
BsmI GAATGC 1 cut(s) 934
BsnI GGCC 2 cut(s) 174, 275
Bsp1286I GDGCHC 1 cut(s) 800
Bsp143I GATC 8 cut(s) 466, 499, 592, 657, 668, 748, 1309, 1351
Bsp19I CCATGG 1 cut(s) 710
BspACI CCGC 2 cut(s) 254, 1122
BspANI GGCC 2 cut(s) 174, 275
BspCNI CTCAG 1 cut(s) 472
BspDI ATCGAT 1 cut(s) 754
BspFNI CGCG 2 cut(s) 256, 1031
BspHI TCATGA 1 cut(s) 1183
BspLI GGNNCC 3 cut(s) 49, 627, 1241
BspMAI CTGCAG 1 cut(s) 433
BspPI GGATC 4 cut(s) 587, 665, 676, 756
BspT107I GGYRCC 1 cut(s) 1239
BsrDI GCAATG 2 cut(s) 103, 1040
BsrI ACTGG 2 cut(s) 701, 1055
BssECI CCNNGG 4 cut(s) 169, 309, 602, 710
BssHII GCGCGC 1 cut(s) 1029
BssMI GATC 8 cut(s) 466, 499, 592, 657, 668, 748, 1309, 1351
BssNI GRCGYC 1 cut(s) 635
BssT1I CCWWGG 1 cut(s) 710
Bst2UI CCWGG 4 cut(s) 171, 507, 603, 1445
Bst4CI ACNGT 4 cut(s) 325, 517, 1239, 1253
Bst6I CTCTTC 1 cut(s) 1484
BstACI GRCGYC 1 cut(s) 635
BstC8I GCNNGC 7 cut(s) 86, 316, 800, 1031, 1372, 1414, 1479
BstDEI CTNAG 3 cut(s) 454, 480, 924
BstDSI CCRYGG 1 cut(s) 710
BstF5I GGATG 3 cut(s) 19, 92, 502
BstFNI CGCG 2 cut(s) 256, 1031
BstHHI GCGC 4 cut(s) 110, 148, 1031, 1033
BstKTI GATC 8 cut(s) 469, 502, 595, 660, 671, 751, 1312, 1354
BstMAI GTCTC 2 cut(s) 1087, 1117
BstMBI GATC 8 cut(s) 466, 499, 592, 657, 668, 748, 1309, 1351
BstMWI GCNNNNNNNGC 3 cut(s) 799, 1205, 1371
BstNI CCWGG 4 cut(s) 171, 507, 603, 1445
BstNSI RCATGY 1 cut(s) 936
BstSCI CCNGG 4 cut(s) 169, 505, 601, 1443
BstSFI CTRYAG 2 cut(s) 300, 429
BstSLI GKGCMC 1 cut(s) 800
BstUI CGCG 2 cut(s) 256, 1031
BstV1I GCAGC 3 cut(s) 308, 342, 415
BstX2I RGATCY 2 cut(s) 1309, 1351
BstYI RGATCY 2 cut(s) 1309, 1351
Bsu15I ATCGAT 1 cut(s) 754
BsuI GTATCC 1 cut(s) 1451
BsuRI GGCC 2 cut(s) 174, 275
BsuTUI ATCGAT 1 cut(s) 754
BtgI CCRYGG 1 cut(s) 710
BtsCI GGATG 3 cut(s) 19, 92, 502
Cac8I GCNNGC 7 cut(s) 86, 316, 800, 1031, 1372, 1414, 1479
CaiI CAGNNNCTG 1 cut(s) 428
CciI TCATGA 1 cut(s) 1183
CfoI GCGC 4 cut(s) 110, 148, 1031, 1033
Cfr13I GGNCC 3 cut(s) 707, 956, 1302
ClaI ATCGAT 1 cut(s) 754
CseI GACGC 2 cut(s) 19, 643
Csp6I GTAC 2 cut(s) 737, 1016
CviAII CATG 5 cut(s) 52, 529, 711, 933, 1184
CviQI GTAC 2 cut(s) 737, 1016
DdeI CTNAG 3 cut(s) 454, 480, 924
DpnI GATC 8 cut(s) 468, 501, 594, 659, 670, 750, 1311, 1353
DpnII GATC 8 cut(s) 466, 499, 592, 657, 668, 748, 1309, 1351
DraI TTTAAA 1 cut(s) 42
EaeI YGGCCR 2 cut(s) 172, 273
Eam1104I CTCTTC 1 cut(s) 1484
EarI CTCTTC 1 cut(s) 1484
Eco130I CCWWGG 1 cut(s) 710
Eco47I GGWCC 3 cut(s) 707, 956, 1302
Eco57I CTGAAG 2 cut(s) 181, 365
EcoRII CCWGG 4 cut(s) 169, 505, 601, 1443
EcoT14I CCWWGG 1 cut(s) 710
EcoT22I ATGCAT 2 cut(s) 934, 1273
ErhI CCWWGG 1 cut(s) 710
FaeI CATG 5 cut(s) 55, 532, 714, 936, 1187
FalI AAGNNNNNCTT 4 cut(s) 548, 580, 710, 742
FatI CATG 5 cut(s) 51, 528, 710, 932, 1183
FbaI TGATCA 2 cut(s) 466, 499
FblI GTMKAC 1 cut(s) 380
Fnu4HI GCNGC 3 cut(s) 297, 331, 429
FokI GGATG 3 cut(s) 26, 79, 489
Fsp4HI GCNGC 3 cut(s) 297, 331, 429
FspBI CTAG 4 cut(s) 18, 161, 1367, 1382
GlaI GCGC 4 cut(s) 109, 147, 1030, 1032
GluI GCNGC 3 cut(s) 297, 331, 429
GsuI CTGGAG 2 cut(s) 718, 840
HaeIII GGCC 2 cut(s) 174, 275
HgaI GACGC 2 cut(s) 19, 643
HhaI GCGC 4 cut(s) 110, 148, 1031, 1033
Hin1I GRCGYC 1 cut(s) 635
Hin1II CATG 5 cut(s) 55, 532, 714, 936, 1187
Hin6I GCGC 4 cut(s) 108, 146, 1029, 1031
HinP1I GCGC 4 cut(s) 108, 146, 1029, 1031
HindIII AAGCTT 3 cut(s) 347, 724, 975
HinfI GANTC 4 cut(s) 157, 609, 677, 1178
HphI GGTGA 3 cut(s) 521, 591, 1397
Hpy166II GTNNAC 4 cut(s) 381, 707, 737, 956
Hpy188I TCNGA 4 cut(s) 345, 1346, 1378, 1463
Hpy188III TCNNGA 5 cut(s) 552, 568, 613, 857, 1184
Hpy8I GTNNAC 4 cut(s) 381, 707, 737, 956
HpyAV CCTTC 3 cut(s) 141, 854, 1382
HpyCH4III ACNGT 4 cut(s) 325, 517, 1239, 1253
HpyCH4IV ACGT 2 cut(s) 114, 1217
HpyCH4V TGCA 6 cut(s) 431, 932, 972, 983, 1230, 1271
HpyF10VI GCNNNNNNNGC 3 cut(s) 799, 1205, 1371
HpyF3I CTNAG 3 cut(s) 454, 480, 924
HpySE526I ACGT 2 cut(s) 114, 1217
Hsp92I GRCGYC 1 cut(s) 635
Hsp92II CATG 5 cut(s) 55, 532, 714, 936, 1187
HspAI GCGC 4 cut(s) 108, 146, 1029, 1031
Ksp22I TGATCA 2 cut(s) 466, 499
Kzo9I GATC 8 cut(s) 466, 499, 592, 657, 668, 748, 1309, 1351
LmnI GCTCC 6 cut(s) 53, 476, 631, 947, 1038, 1379
Lsp1109I GCAGC 3 cut(s) 308, 342, 415
LweI GCATC 3 cut(s) 4, 992, 1346
MaeI CTAG 4 cut(s) 18, 161, 1367, 1382
MaeII ACGT 2 cut(s) 114, 1217
MaeIII GTNAC 4 cut(s) 388, 509, 639, 935
MalI GATC 8 cut(s) 468, 501, 594, 659, 670, 750, 1311, 1353
MboI GATC 8 cut(s) 466, 499, 592, 657, 668, 748, 1309, 1351
MboII GAAGA 6 cut(s) 49, 52, 187, 1165, 1223, 1501
MflI RGATCY 2 cut(s) 1309, 1351
MhlI GDGCHC 1 cut(s) 800
MlsI TGGCCA 2 cut(s) 174, 275
MluCI AATT 2 cut(s) 1079, 1232
MluNI TGGCCA 2 cut(s) 174, 275
MlyI GAGTC 1 cut(s) 151
MmeI TCCRAC 2 cut(s) 1245, 1324
MnlI CCTC 6 cut(s) 300, 319, 864, 1052, 1062, 1467
Mox20I TGGCCA 2 cut(s) 174, 275
Mph1103I ATGCAT 2 cut(s) 934, 1273
MscI TGGCCA 2 cut(s) 174, 275
MseI TTAA 5 cut(s) 8, 41, 788, 1278, 1406
MslI CAYNNNNRTG 1 cut(s) 507
Msp20I TGGCCA 2 cut(s) 174, 275
MspR9I CCNGG 4 cut(s) 171, 507, 603, 1445
Mva1269I GAATGC 1 cut(s) 934
MvaI CCWGG 4 cut(s) 171, 507, 603, 1445
MvnI CGCG 2 cut(s) 256, 1031
MwoI GCNNNNNNNGC 3 cut(s) 799, 1205, 1371
NcoI CCATGG 1 cut(s) 710
NdeII GATC 8 cut(s) 466, 499, 592, 657, 668, 748, 1309, 1351
NlaIII CATG 5 cut(s) 55, 532, 714, 936, 1187
NlaIV GGNNCC 3 cut(s) 49, 627, 1241
NmeAIII GCCGAG 1 cut(s) 290
NmuCI GTSAC 3 cut(s) 509, 639, 935
NsiI ATGCAT 2 cut(s) 934, 1273
NspI RCATGY 1 cut(s) 936
PagI TCATGA 1 cut(s) 1183
PauI GCGCGC 1 cut(s) 1029
PctI GAATGC 1 cut(s) 934
PfeI GAWTC 3 cut(s) 609, 677, 1178
PflFI GACNNNGTC 2 cut(s) 515, 637
PkrI GCNGC 3 cut(s) 298, 332, 430
PleI GAGTC 1 cut(s) 151
PpsI GAGTC 1 cut(s) 151
PshBI ATTAAT 1 cut(s) 8
Psp6I CCWGG 4 cut(s) 169, 505, 601, 1443
PspGI CCWGG 4 cut(s) 169, 505, 601, 1443
PspN4I GGNNCC 3 cut(s) 49, 627, 1241
PspPI GGNCC 3 cut(s) 707, 956, 1302
PstI CTGCAG 1 cut(s) 433
PstNI CAGNNNCTG 1 cut(s) 428
PsuI RGATCY 2 cut(s) 1309, 1351
PsyI GACNNNGTC 2 cut(s) 515, 637
PteI GCGCGC 1 cut(s) 1029
RsaI GTAC 2 cut(s) 738, 1017
RsaNI GTAC 2 cut(s) 737, 1016
RseI CAYNNNNRTG 1 cut(s) 507
SaqAI TTAA 5 cut(s) 8, 41, 788, 1278, 1406
SatI GCNGC 3 cut(s) 297, 331, 429
Sau3AI GATC 8 cut(s) 466, 499, 592, 657, 668, 748, 1309, 1351
Sau96I GGNCC 3 cut(s) 707, 956, 1302
SchI GAGTC 1 cut(s) 151
ScrFI CCNGG 4 cut(s) 171, 507, 603, 1445
SduI GDGCHC 1 cut(s) 800
SfaNI GCATC 3 cut(s) 4, 992, 1346
SfcI CTRYAG 2 cut(s) 300, 429
SinI GGWCC 3 cut(s) 707, 956, 1302
SmiMI CAYNNNNRTG 1 cut(s) 507
SmlI CTYRAG 1 cut(s) 568
SmoI CTYRAG 1 cut(s) 568
Sse9I AATT 2 cut(s) 1079, 1232
SsiI CCGC 2 cut(s) 254, 1122
SspMI CTAG 4 cut(s) 18, 161, 1367, 1382
StyD4I CCNGG 4 cut(s) 169, 505, 601, 1443
StyI CCWWGG 1 cut(s) 710
TaaI ACNGT 4 cut(s) 325, 517, 1239, 1253
TaiI ACGT 2 cut(s) 117, 1220
TaqI TCGA 1 cut(s) 754
TasI AATT 2 cut(s) 1079, 1232
TfiI GAWTC 3 cut(s) 609, 677, 1178
Tru1I TTAA 5 cut(s) 8, 41, 788, 1278, 1406
Tru9I TTAA 5 cut(s) 8, 41, 788, 1278, 1406
TseFI GTSAC 3 cut(s) 509, 639, 935
TseI GCWGC 3 cut(s) 296, 330, 428
Tsp45I GTSAC 3 cut(s) 509, 639, 935
TspDTI ATGAA 3 cut(s) 640, 718, 1175
Tth111I GACNNNGTC 2 cut(s) 515, 637
VpaK11BI GGWCC 3 cut(s) 707, 956, 1302
VspI ATTAAT 1 cut(s) 8
XceI RCATGY 1 cut(s) 936
XmiI GTMKAC 1 cut(s) 380
XspI CTAG 4 cut(s) 18, 161, 1367, 1382
Zsp2I ATGCAT 2 cut(s) 934, 1273
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.