Rh5CG049400

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Reverse (-)
3516715 .. 3521195
4481 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG049400.1

Sequence Viewer

Length: 2493 bp
ATGGGCATTGTTTTGTTGTTCTTCCTGTTCATCTCCAGTTTGCTTCCCTCCCAGTATACTGCTCAGCTTTATAACATTACTCCTTCAAAACCATTAGCACTAGGACAAACTCTAGTCTCCCCTGGCCGCATTTATGAATTGGGCTTCTTCAGTTTGAGTAATTCCACTAATAGGTATCTGGGGTTATGGCACAACAATATATATCCCCGGAAATTTGTGTGGCTAGCCAACAGAGAAAAGCCTCTTTCAAGTGCAGACACATCGGCTAATCTGAGAATTAGCAGCAATGGGAATCTGGAGCTTGTAGATGGGAAACAGAACTCTGTCTGGTCAACCATTGAAGTATCATCATCTAATAGTACTTCAGCTGTTGCAGTTCTTCTAGACACTGGAAACTTTGTCGTCAAAGATGATATGGGAGCTGATGAGTTTATATGGCAGAGCTTTGATTATCCTTGTGACACTATGCTACCTCGCCAGCGGCTAGGATTCGATAGTAAATCCGGAAAGAGGTATGTCCTCACTAACTGGAAAAGTGATAATGATCCATCAATGGGTATATTCTCGTCTGGACTTTCAGCAGAGACACCATCACAAGTGTTTGTTTGGATTAACAATGGATCAACTCCTCACTACAGAAGTGGACCATGGGATAAATCAAAGTTCATTGGGGTAGTGGACAAGGATTCCCAGTGGCAGTATCTAAGTGGATATACTCTAGAGGATGATGTGAAGCAAGGAACGAAGTATTTGTCTTACTATAATTTAGTCGACAACATTACTGGATATACAGAGATGTCTTCAGATGGTTCAGTAAGGCTTATGTATTCAGAAAATGGCAAGAACTGGAGTGATGTCTTGAAGATTTCAAATAATGCATGTGACATTTATGGAACATGTGGACCTTTTGGGGTTTGCAAAGCTTCTGAGTCTCCAATCTGCAAGTGTTTGAAAGGGTTTGTACCCAAATTGCTCGACGAATGGAGCAAAGGGAACTGGACTGGAGGGTGTGTGAGGCAAACCAATTTGTTTTGTGAGAGACAAACAAATATCTCTGTCTCAACTACAAGAAAACAAGATGATGGGTTTTTGAAGATGGCAAGGTCCAAAGTACCAGATCATCATGTGTATATTTCTTCTTTGGGCGATGCAGACACATTTGAAGACTGCAAGATGGTGTGCCTAAAAAATTGTACTTGCTTAGCCTATGCATATGTTAATACTATAGGGTGCTTGCTCTGGTTCGATTACCTTATTGATATACAGGTGTTTCACTCTGATGGAGAAGATCTATATATTCGCCTAGCACAATCCGAACTAGTTGAAGCAAAGCCAATAAAGTTAATTGCCAGCCTCACAGCTATTGGTTTTATGAGTTTGTTGGCTGCCATAGTTTTTGGTTTATACAGATTGCGTGCCAGTAAAAAGGGTAAGAAAATGAAATGGTCTAGAGAAGGTCTTCTAGAATATATAGGAAAACATGACTCCTCGGAGCTAAAGATATATGATTTTGATAGCATACTAATCGCCACAGACAGCTTCAACATAAAAAACAAACTCGGGCAAGGAGGCTTTGGCCCAGTTTATAAGGGAATGCTACCGGAAGGGAAAGAAATAGCAGTAAAAAGACTATCTAGTAGCTCAGGACAAGGTGTTGAGGAGTTCAAGAATGAGATGCTGTTGATCTCCGAGCTTCAACACAAAAATCTTGTGAGGATCATGGGTTGTTGTGTTAAGGAGGATGAGAAGTTACTTATTTACGAGTTCATGCCGAACAAAAGCTTGGATACTTTTCTATTTGATCTGACAAAGAGAGCAGTGCTTGATTGGGCTACACGCTTTAATATTATTCAAGGTGTAGCTAGAGGGCTTCTTTATCTCCATCATGATTCCTATTTGAAGATAATACACAGAGACTTGAAAGTCAGCAATATTCTCTTGGATGAGAAAATGAATCCTAAAATTTCAGATTTTGGATTGGCACGCATAGTTGAAGGAACACAAATTCTAGAAAATACTCAGAGGGTGGTGGGAACACGTGGCTATATATCTCCAGAGTATGCCATGGGTGGAATATTTTCCGAAAAATCTGATGTCTACAGTTTTGGAGTTTTGGTATTGGAGATTATTAGCAGCAAGAAGACTGCTGGCTTTTATTTATATGGCCTACAGCTAGGCTTTCTAGCCTATGCATGGAAGTTGTGGAAGGAAGATAGAGGATTGGAGTTAGTAGATGAAATACTGGGTGATTCATATTCCTCATCAGAAGTAATGAAATGTGTGCATATTGGGCTTCTTTGTGTACAAGACAATGCTACGGATAGGCCTACCATGACAGATATAGCGTTGATGCTAAGTAGTGAAATTGATGGTCCACAACCTAAGGAGCCTTTGTTCACTATCCCGAATTCAGTTTCTTATCCTAAACCACAATATGAAAATATTGGTTCCTCCAAAAATGAAGCTAGCATTACAGTGATTGAAGGGCGATAA

Protein Analysis

830

Amino Acids

93.06

Weight (kDa)

6.1

Isoelectric Point (pI)

38.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 72 - 178 3.5e-32 D-mannose binding lectin
S_locus_glycop PF00954 212 - 323 7.1e-27 S-locus glycoprotein domain
PAN_2 PF08276 358 - 421 1.3e-14 PAN-like domain
Pkinase PF00069 514 - 714 5.6e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 515 - 782 9e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 72, 1587
AasI GACNNNNNNGTC 1 cut(s) 1922
AccI GTMKAC 3 cut(s) 56, 771, 2097
AccIII TCCGGA 1 cut(s) 503
AciI CCGC 2 cut(s) 127, 481
AclWI GGATC 3 cut(s) 539, 628, 1724
AcoI YGGCCR 1 cut(s) 124
AcsI RAATTY 4 cut(s) 212, 1962, 2004, 2407
AcuI CTGAAG 3 cut(s) 133, 348, 786
AcvI CACGTG 1 cut(s) 2039
AfaI GTAC 5 cut(s) 361, 963, 1113, 1195, 2304
AfiI CCNNNNNNNGG 4 cut(s) 171, 510, 554, 2193
AflIII ACRYGT 2 cut(s) 896, 2036
AhlI ACTAGT 1 cut(s) 1318
AjnI CCWGG 1 cut(s) 121
AjuI GAANNNNNNNTTGG 2 cut(s) 1766, 1798
AloI GAACNNNNNNTCC 2 cut(s) 2378, 2410
Alw26I GTCTC 6 cut(s) 121, 578, 936, 1033, 1063, 1908
AlwI GGATC 3 cut(s) 539, 628, 1724
Ama87I CYCGRG 1 cut(s) 1559
Aor13HI TCCGGA 1 cut(s) 503
AoxI GGCC 4 cut(s) 124, 1576, 2164, 2324
ApeKI GCWGC 3 cut(s) 282, 1385, 2133
ApoI RAATTY 4 cut(s) 212, 1962, 2004, 2407
ArsI GACNNNNNNTTYG 2 cut(s) 737, 769
Asp700I GAANNNNTTC 2 cut(s) 1458, 2077
AspS9I GGNCC 5 cut(s) 644, 902, 1104, 1577, 2372
AsuC2I CCSGG 1 cut(s) 208
AsuHPI GGTGA 1 cut(s) 2258
AsuNHI GCTAGC 2 cut(s) 223, 2465
AvaI CYCGRG 1 cut(s) 1559
AvaII GGWCC 4 cut(s) 644, 902, 1104, 2372
AxyI CCTNAGG 1 cut(s) 2382
BbrPI CACGTG 1 cut(s) 2039
BbsI GAAGAC 4 cut(s) 792, 1170, 1451, 2147
BbvI GCAGC 3 cut(s) 294, 1372, 2145
BcgI CGANNNNNNTGC 4 cut(s) 243, 277, 1507, 1541
BciT130I CCWGG 1 cut(s) 123
BciVI GTATCC 1 cut(s) 1780
BcnI CCSGG 1 cut(s) 208
BcoDI GTCTC 6 cut(s) 121, 578, 936, 1033, 1063, 1908
BcuI ACTAGT 1 cut(s) 1318
BfmI CTRYAG 4 cut(s) 634, 1224, 2098, 2168
BfuI GTATCC 1 cut(s) 1780
BglII AGATCT 1 cut(s) 1288
BisI GCNGC 5 cut(s) 127, 283, 482, 1386, 2134
BlpI GCTNAGC 2 cut(s) 63, 1201
BlsI GCNGC 5 cut(s) 128, 284, 483, 1387, 2135
BmcAI AGTACT 1 cut(s) 361
Bme1390I CCNGG 2 cut(s) 123, 208
Bme18I GGWCC 4 cut(s) 644, 902, 1104, 2372
BmeT110I CYCGRG 1 cut(s) 1559
BmgT120I GGNCC 5 cut(s) 644, 902, 1104, 1577, 2372
BmiI GGNNCC 2 cut(s) 2388, 2449
BmrFI CCNGG 2 cut(s) 123, 208
BmrI ACTGGG 4 cut(s) 46, 685, 1574, 2252
BmsI GCATC 3 cut(s) 1138, 1665, 2340
BmtI GCTAGC 2 cut(s) 227, 2469
BmuI ACTGGG 4 cut(s) 46, 685, 1574, 2252
BpiI GAAGAC 4 cut(s) 792, 1170, 1451, 2147
BpmI CTGGAG 5 cut(s) 19, 317, 868, 1023, 2037
Bpu10I CCTNAGC 1 cut(s) 1642
Bpu1102I GCTNAGC 2 cut(s) 63, 1201
BpuMI CCSGG 1 cut(s) 208
BsaAI YACGTR 1 cut(s) 2039
BsaBI GATNNNNATC 1 cut(s) 543
BsaJI CCNNGG 5 cut(s) 121, 206, 647, 1488, 2064
BsaWI WCCGGW 2 cut(s) 503, 1600
BsaXI ACNNNNNCTCC 6 cut(s) 996, 1026, 2100, 2130, 2378, 2408
Bsc4I CCNNNNNNNGG 4 cut(s) 171, 510, 554, 2193
Bse21I CCTNAGG 1 cut(s) 2382
Bse3DI GCAATG 1 cut(s) 292
Bse8I GATNNNNATC 1 cut(s) 543
BseAI TCCGGA 1 cut(s) 503
BseBI CCWGG 1 cut(s) 123
BseDI CCNNGG 5 cut(s) 121, 206, 647, 1488, 2064
BseGI GGATG 3 cut(s) 730, 1747, 1948
BseJI GATNNNNATC 1 cut(s) 543
BseLI CCNNNNNNNGG 4 cut(s) 171, 510, 554, 2193
BseMI GCAATG 1 cut(s) 292
BseMII CTCAG 5 cut(s) 77, 263, 918, 1656, 2033
BseRI GAGGAG 3 cut(s) 618, 1477, 1673
BseXI GCAGC 3 cut(s) 294, 1372, 2145
BsgI GTGCAG 1 cut(s) 273
BshFI GGCC 4 cut(s) 126, 1578, 2166, 2326
BsiHKCI CYCGRG 1 cut(s) 1559
BsiSI CCGG 3 cut(s) 208, 504, 1601
BslI CCNNNNNNNGG 4 cut(s) 171, 510, 554, 2193
BsmAI GTCTC 6 cut(s) 121, 578, 936, 1033, 1063, 1908
BsmI GAATGC 1 cut(s) 1599
BsnI GGCC 4 cut(s) 126, 1578, 2166, 2326
BsoBI CYCGRG 1 cut(s) 1559
Bsp13I TCCGGA 1 cut(s) 503
Bsp1407I TGTACA 1 cut(s) 2302
Bsp143I GATC 7 cut(s) 544, 620, 1117, 1288, 1683, 1716, 1801
Bsp1720I GCTNAGC 2 cut(s) 63, 1201
Bsp19I CCATGG 2 cut(s) 647, 2064
BspACI CCGC 2 cut(s) 127, 481
BspANI GGCC 4 cut(s) 126, 1578, 2166, 2326
BspCNI CTCAG 5 cut(s) 76, 264, 919, 1655, 2032
BspEI TCCGGA 1 cut(s) 503
BspHI TCATGA 1 cut(s) 1885
BspLI GGNNCC 2 cut(s) 2388, 2449
BspOI GCTAGC 2 cut(s) 227, 2469
BspPI GGATC 3 cut(s) 539, 628, 1724
BsrDI GCAATG 1 cut(s) 292
BsrGI TGTACA 1 cut(s) 2302
BssECI CCNNGG 5 cut(s) 121, 206, 647, 1488, 2064
BssMI GATC 7 cut(s) 544, 620, 1117, 1288, 1683, 1716, 1801
BssNAI GTATAC 1 cut(s) 57
BssT1I CCWWGG 2 cut(s) 647, 2064
Bst1107I GTATAC 1 cut(s) 57
Bst2UI CCWGG 1 cut(s) 123
Bst4CI ACNGT 2 cut(s) 2102, 2476
BstAUI TGTACA 1 cut(s) 2302
BstBAI YACGTR 1 cut(s) 2039
BstC8I GCNNGC 8 cut(s) 225, 479, 1235, 1351, 1416, 1984, 2149, 2467
BstDEI CTNAG 9 cut(s) 63, 272, 704, 927, 1201, 1642, 2019, 2354, 2382
BstDSI CCRYGG 2 cut(s) 647, 2064
BstF5I GGATG 3 cut(s) 730, 1747, 1948
BstKTI GATC 7 cut(s) 547, 623, 1120, 1291, 1686, 1719, 1804
BstMAI GTCTC 6 cut(s) 121, 578, 936, 1033, 1063, 1908
BstMBI GATC 7 cut(s) 544, 620, 1117, 1288, 1683, 1716, 1801
BstMWI GCNNNNNNNGC 1 cut(s) 2290
BstNI CCWGG 1 cut(s) 123
BstNSI RCATGY 2 cut(s) 882, 900
BstSCI CCNGG 2 cut(s) 121, 206
BstSFI CTRYAG 4 cut(s) 634, 1224, 2098, 2168
BstV1I GCAGC 3 cut(s) 294, 1372, 2145
BstV2I GAAGAC 4 cut(s) 792, 1170, 1451, 2147
BstX2I RGATCY 1 cut(s) 1288
BstYI RGATCY 1 cut(s) 1288
BstZ17I GTATAC 1 cut(s) 57
Bsu36I CCTNAGG 1 cut(s) 2382
BsuI GTATCC 1 cut(s) 1780
BsuRI GGCC 4 cut(s) 126, 1578, 2166, 2326
BtgI CCRYGG 2 cut(s) 647, 2064
BtgZI GCGATG 1 cut(s) 1161
BtsCI GGATG 3 cut(s) 730, 1747, 1948
BtsI GCAGTG 1 cut(s) 1824
BtsIMutI CAGTG 4 cut(s) 387, 698, 1824, 2481
Cac8I GCNNGC 8 cut(s) 225, 479, 1235, 1351, 1416, 1984, 2149, 2467
CciI TCATGA 1 cut(s) 1885
Cfr13I GGNCC 5 cut(s) 644, 902, 1104, 1577, 2372
Csp6I GTAC 5 cut(s) 360, 962, 1112, 1194, 2303
CviQI GTAC 5 cut(s) 360, 962, 1112, 1194, 2303
DdeI CTNAG 9 cut(s) 63, 272, 704, 927, 1201, 1642, 2019, 2354, 2382
DpnI GATC 7 cut(s) 546, 622, 1119, 1290, 1685, 1718, 1803
DpnII GATC 7 cut(s) 544, 620, 1117, 1288, 1683, 1716, 1801
DrdI GACNNNNNNGTC 1 cut(s) 1922
DseDI GACNNNNNNGTC 1 cut(s) 1922
EaeI YGGCCR 1 cut(s) 124
Eco130I CCWWGG 2 cut(s) 647, 2064
Eco147I AGGCCT 1 cut(s) 2326
Eco47I GGWCC 4 cut(s) 644, 902, 1104, 2372
Eco57I CTGAAG 3 cut(s) 133, 348, 786
Eco72I CACGTG 1 cut(s) 2039
Eco81I CCTNAGG 1 cut(s) 2382
Eco88I CYCGRG 1 cut(s) 1559
EcoRI GAATTC 1 cut(s) 2407
EcoRII CCWGG 1 cut(s) 121
EcoT14I CCWWGG 2 cut(s) 647, 2064
EcoT22I ATGCAT 3 cut(s) 880, 1213, 2194
ErhI CCWWGG 2 cut(s) 647, 2064
FauNDI CATATG 1 cut(s) 1213
FblI GTMKAC 3 cut(s) 56, 771, 2097
Fnu4HI GCNGC 5 cut(s) 127, 283, 482, 1386, 2134
FokI GGATG 3 cut(s) 737, 1754, 1955
Fsp4HI GCNGC 5 cut(s) 127, 283, 482, 1386, 2134
GluI GCNGC 5 cut(s) 127, 283, 482, 1386, 2134
GsuI CTGGAG 5 cut(s) 19, 317, 868, 1023, 2037
HaeIII GGCC 4 cut(s) 126, 1578, 2166, 2326
HapII CCGG 3 cut(s) 208, 504, 1601
HincII GTYRAC 2 cut(s) 333, 772
HindII GTYRAC 2 cut(s) 333, 772
HindIII AAGCTT 2 cut(s) 921, 1780
HinfI GANTC 8 cut(s) 292, 489, 686, 929, 1484, 1889, 1954, 2249
HpaII CCGG 3 cut(s) 208, 504, 1601
HphI GGTGA 1 cut(s) 2258
Hpy99I CGWCG 1 cut(s) 980
HpyAV CCTTC 6 cut(s) 93, 1448, 1598, 1988, 2200, 2477
HpyCH4III ACNGT 2 cut(s) 2102, 2476
HpyCH4IV ACGT 1 cut(s) 2038
HpyF10VI GCNNNNNNNGC 1 cut(s) 2290
HpyF3I CTNAG 9 cut(s) 63, 272, 704, 927, 1201, 1642, 2019, 2354, 2382
HpySE526I ACGT 1 cut(s) 2038
Kpn2I TCCGGA 1 cut(s) 503
Kzo9I GATC 7 cut(s) 544, 620, 1117, 1288, 1683, 1716, 1801
LmnI GCTCC 5 cut(s) 298, 419, 984, 1492, 2386
Lsp1109I GCAGC 3 cut(s) 294, 1372, 2145
LweI GCATC 3 cut(s) 1138, 1665, 2340
MaeII ACGT 1 cut(s) 2038
MaeIII GTNAC 3 cut(s) 458, 881, 1749
MalI GATC 7 cut(s) 546, 622, 1119, 1290, 1685, 1718, 1803
MboI GATC 7 cut(s) 544, 620, 1117, 1288, 1683, 1716, 1801
MflI RGATCY 1 cut(s) 1288
MlyI GAGTC 2 cut(s) 938, 1478
Mph1103I ATGCAT 3 cut(s) 880, 1213, 2194
MroI TCCGGA 1 cut(s) 503
MroXI GAANNNNTTC 2 cut(s) 1458, 2077
MseI TTAA 5 cut(s) 612, 1218, 1343, 1734, 1842
MslI CAYNNNNRTG 2 cut(s) 1278, 2474
MspA1I CMGCKG 2 cut(s) 368, 481
MspI CCGG 3 cut(s) 208, 504, 1601
MspR9I CCNGG 2 cut(s) 123, 208
Mva1269I GAATGC 1 cut(s) 1599
MvaI CCWGG 1 cut(s) 123
MwoI GCNNNNNNNGC 1 cut(s) 2290
NciI CCSGG 1 cut(s) 208
NcoI CCATGG 2 cut(s) 647, 2064
NdeI CATATG 1 cut(s) 1213
NdeII GATC 7 cut(s) 544, 620, 1117, 1288, 1683, 1716, 1801
NheI GCTAGC 2 cut(s) 223, 2465
NlaIV GGNNCC 2 cut(s) 2388, 2449
NmuCI GTSAC 2 cut(s) 458, 881
NsiI ATGCAT 3 cut(s) 880, 1213, 2194
NspI RCATGY 2 cut(s) 882, 900
PagI TCATGA 1 cut(s) 1885
PceI AGGCCT 1 cut(s) 2326
PciI ACATGT 1 cut(s) 896
PctI GAATGC 1 cut(s) 1599
PdmI GAANNNNTTC 2 cut(s) 1458, 2077
PfeI GAWTC 6 cut(s) 292, 489, 686, 1889, 1954, 2249
PkrI GCNGC 5 cut(s) 128, 284, 483, 1387, 2135
PleI GAGTC 2 cut(s) 937, 1478
PmaCI CACGTG 1 cut(s) 2039
PmlI CACGTG 1 cut(s) 2039
PpsI GAGTC 2 cut(s) 937, 1478
Ppu21I YACGTR 1 cut(s) 2039
PscI ACATGT 1 cut(s) 896
PsiI TTATAA 2 cut(s) 72, 1587
Psp6I CCWGG 1 cut(s) 121
PspCI CACGTG 1 cut(s) 2039
PspGI CCWGG 1 cut(s) 121
PspN4I GGNNCC 2 cut(s) 2388, 2449
PspPI GGNCC 5 cut(s) 644, 902, 1104, 1577, 2372
PsuI RGATCY 1 cut(s) 1288
PvuII CAGCTG 1 cut(s) 368
RsaI GTAC 5 cut(s) 361, 963, 1113, 1195, 2304
RsaNI GTAC 5 cut(s) 360, 962, 1112, 1194, 2303
RseI CAYNNNNRTG 2 cut(s) 1278, 2474
SalI GTCGAC 1 cut(s) 770
SaqAI TTAA 5 cut(s) 612, 1218, 1343, 1734, 1842
SatI GCNGC 5 cut(s) 127, 283, 482, 1386, 2134
Sau3AI GATC 7 cut(s) 544, 620, 1117, 1288, 1683, 1716, 1801
Sau96I GGNCC 5 cut(s) 644, 902, 1104, 1577, 2372
ScaI AGTACT 1 cut(s) 361
SchI GAGTC 2 cut(s) 938, 1478
ScrFI CCNGG 2 cut(s) 123, 208
SfaNI GCATC 3 cut(s) 1138, 1665, 2340
SfcI CTRYAG 4 cut(s) 634, 1224, 2098, 2168
SinI GGWCC 4 cut(s) 644, 902, 1104, 2372
SmiMI CAYNNNNRTG 2 cut(s) 1278, 2474
SpeI ACTAGT 1 cut(s) 1318
SseBI AGGCCT 1 cut(s) 2326
SsiI CCGC 2 cut(s) 127, 481
SspI AATATT 4 cut(s) 1846, 1933, 2076, 2443
StuI AGGCCT 1 cut(s) 2326
StyD4I CCNGG 2 cut(s) 121, 206
StyI CCWWGG 2 cut(s) 647, 2064
TaaI ACNGT 2 cut(s) 2102, 2476
TaiI ACGT 1 cut(s) 2041
TaqI TCGA 4 cut(s) 492, 771, 975, 1245
TatI WGTACW 3 cut(s) 359, 1193, 2302
TauI GCSGC 2 cut(s) 129, 484
TfiI GAWTC 6 cut(s) 292, 489, 686, 1889, 1954, 2249
Tru1I TTAA 5 cut(s) 612, 1218, 1343, 1734, 1842
Tru9I TTAA 5 cut(s) 612, 1218, 1343, 1734, 1842
TscAI CASTG 4 cut(s) 394, 698, 1824, 2481
TseFI GTSAC 2 cut(s) 458, 881
TseI GCWGC 3 cut(s) 282, 1385, 2133
Tsp45I GTSAC 2 cut(s) 458, 881
TspGWI ACGGA 1 cut(s) 2333
TspRI CASTG 4 cut(s) 394, 698, 1824, 2481
VpaK11BI GGWCC 4 cut(s) 644, 902, 1104, 2372
XapI RAATTY 4 cut(s) 212, 1962, 2004, 2407
XbaI TCTAGA 5 cut(s) 382, 718, 1448, 1462, 2008
XceI RCATGY 2 cut(s) 882, 900
XmiI GTMKAC 3 cut(s) 56, 771, 2097
XmnI GAANNNNTTC 2 cut(s) 1458, 2077
ZrmI AGTACT 1 cut(s) 361
Zsp2I ATGCAT 3 cut(s) 880, 1213, 2194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.