MD05G1329700.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
45441637 .. 45447371
5735 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1329700.v1.1.491

Sequence Viewer

Length: 2907 bp
ATGGCAGACCCAGCCAAGCAAGCACTGCTAGATTGGAGAAAACGCTTCACGATTATTGAAGGGATTGCAGGAGGGCTCCTTTATCTCCTGCGAGATTCTAGACTTGGGATAATTCACCGAGACCTAAAAGCAAGCAACATTTTGCTGGATGATGATATGATTCCCAAGATTTTGGACTTCGGTATGGCAAGAATATTTGGGGGTAACAAAATCGAACAAAATACAACTCAAATTGTTGGAACATTGGGCTATATAGCACCTGAATATGCAACAGAAGGTCTGTTTTCAGTAAAGCCGGATGTCTATAGCTTTGGGGTATTGCTGCTAGAGATTATACGCTTCACATTTCTTTTTATAAGAAAACATATTAGAATTCAGATGGGGTTTAGAACCGAAACCATTGGTAGTATTTTCGGTTCCACCATGTTCTTCCTAATCTTCTTCAGCTTGCTTCTGTCACAGCATCATTGTGCTGAAGTTTATGAAATAACACCGTCACAACCATTTTCACAGACACAAACCCTTGTCTCCCCCAGCCGCATTTTCGAATTGGGGTTCTTCAGTCCTAATGGTTCGGTTAACAAGTACGTGGGGATATGGCACACAAACATATCTCCGCATAAAGTTGTATGGGTTGCCAACAGAGAAAATCCTATTGCAGCTTCAGATACCTTGGCTAATTTGACAATTAGCAGCAATGGGAATCTGGAGCTTGTAGATGGGAAGCAGAATTCTCTTTGGTCAACGAATATTTCAATGCCATTTAATGGTTCAGCTGCAGGGCTTTTGGACAGTGGAAATCTTGTCGTAAAACATGATGATGTCGGAGCTGTTCCATTATGGCAGAGTTTTGATTATCCTAGTGACACACTTCTACCAAGCATGGTGCTGGGATTCGATAGTAAATCTGGGAAGCGCAGTTTAATGAAAGCCTGGAAAAGTGAGAGTGATCCATCAGCTGGCTTGTTCTTGGTTGGACTTTCACCAGACGTTCCATCACAAGTGTTCATTTGGATTAATGAATCGAAACCCTACTGGAGAAGTGGGGCATGGGATAAATCAAGGTTCATCGGGGCACCAGATATGAATAATCAATATCAAAGTGGATTCACTCTAAATGATGATGTGAACCAGGGAACAAAATCTTTTTCTTACAGGGTTTTTAACAATACGCTTTCATATCTTGGCATCTCTTCAGACGGAGTACTGAGTTATTTTAAGCTTTCGGACAATGGCAGCAACTGGTGGCTTCCCTGGGTGGCACCGGTGAATTCATGTGACATTTATGGAACATGTGGAGTTTATGGTGTCTGCAAAGGTTCTGAATCTCCAAATCCAAATTGCGAGTGTTTGAAAGGGTTTGTACCAAAATCAAATGAGGAATGGAGCAACGGAAACAGGACTGGAGGGTGTGTGAGGCACACCGAATTGTTTTGCGATCAGAGTAACACAAGCAGGTCATTTTCTTCAGGTGGAAAAGAAGATGGGTTCCGGAAGATGGTGGGATTAAAGCTACCAGATTTTCATGAGCTTATCGAAAATCTGGAGGCTGACGAGTGCAAGATACGATGCCTAAATAATTGTTCTTGTCAGGCTTATGCGCAAGTTAATAATATAGGGTGTTTGGTCTGGTCCAGTGACCTTATTGATATACAAGAGTTTGCATTTGGAGGGAACGATCTTTATATTCGCCTAGCACTCGGAGAATTAGATGAAGGAAAGCCTGTAAAGCTAATTGCTAGCGTCACTGCTGTTGGTTTTATCAGTATTTTGAGTGCCATAGCTTTCGGCGTTCAGAGACTGCGCGGGAACACGAAAGAAAAAACAAAGTTAATGCAGTTGAATCATACAAGTGATAATTCAAGGGATAATCTTCAAGAATACATAAGAAAACATGATCCATCAGAGCTATTCATCTACGATTTTGACAGCATATTAAATGCCACAAACAATTTCAGCACCATGAACAAACTCGGGGAAGGAGGTTTCGGCCCTGTTTACAAGGGTAAGCTACAAGAAGGAAAGGAAATAGCAGTAAAACGACTATCTAGTAGCTCGGGGCAAGGCATAGAGGAGTTCAAGAATGAGATGCTGCTGATCTCCAAACTCCAACACAAAAATCTTGTTAGGATCATGGGCTGCTGCGTCAAAGACGATGAAAAGTTACTGATTTATGAGTTCATGCCGAACAGAAGCTTGGATACTCTTCTATTCGATCGAACGCGCAGAGCACAGCTTGATTGGGCTAGACGCTTCAATATTATTCAGGGAGTTGCTAGAGGACTTCTTTATCTCCACCACGATTCCCGTTTGAAGGTAATCCATAGAGATTTGAAGGTTAGTAACATTCTCTTGGATGAGAATATGAACCCAAAAATTTCAGATTTTGGATTGGCACGAATCTTTGAAGGGACACAGAGTCTAGCAAATACTCACAAGGTTGTGGGAACACGTGGTTATATGTCTCCAGAGTATGCCATGGGTGGGATATTTTCTGAAAAATCTGATGTCTATAGCTTTGGCGTCTTGTTATTGGAGATTATCGCGGGCAAAAAGAATACTAGCTTCTATTACAACGAGGAACAGCATGGATTTTTAGCTCATGTTTGGCACTTATGGAATGAAGGCAGGGGACTGGACTTGCTAGATGAAGTATTGGTGGATTCATATTCGTCCTTAGAAGTAATGAGATGCATGCACATCGGACTCCTTTGCGTGCAGGACAAGTCTGAAGATAGACCAACCATGCCGGACGTAGTTTTCACACTAAGTAGTGAGACGGATCTTCCACTACCTAAGCAGCCTATATTTTCTTATTTCCGAATCTCTGTCTCTAATCCTCAACCCAAATATGACAATATTTTCTCTGCAAATGAAGATACCATAACCGTGATCGAAGGTCGGTAA

Protein Analysis

969

Amino Acids

108.54

Weight (kDa)

5.92

Isoelectric Point (pI)

44.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 9 - 113 2.5e-19 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 17 - 121 2.6e-20 Protein kinase domain
B_lectin PF01453 209 - 313 2.8e-31 D-mannose binding lectin
S_locus_glycop PF00954 346 - 458 9.9e-29 S-locus glycoprotein domain
PAN_2 PF08276 493 - 551 6.3e-17 PAN-like domain
Pkinase PF00069 653 - 855 5.1e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 654 - 861 4.8e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 356
Acc16I TGCGCA 1 cut(s) 1602
Acc36I ACCTGC 1 cut(s) 1446
AccB1I GGYRCC 2 cut(s) 1075, 1261
AccB7I CCANNNNNTGG 2 cut(s) 767, 959
AccII CGCG 3 cut(s) 1806, 2224, 2546
AccIII TCCGGA 1 cut(s) 1491
AciI CCGC 4 cut(s) 538, 617, 1806, 2546
AclWI GGATC 4 cut(s) 944, 1892, 2138, 2790
AcsI RAATTY 4 cut(s) 372, 730, 1270, 2376
AcuI CTGAAG 7 cut(s) 427, 495, 544, 648, 1179, 1452, 2751
AcvI CACGTG 1 cut(s) 2453
AcyI GRCGYC 1 cut(s) 2523
AfaI GTAC 3 cut(s) 587, 1206, 1365
AfiI CCNNNNNNNGG 5 cut(s) 767, 959, 1498, 2314, 2484
AflIII ACRYGT 2 cut(s) 1292, 2450
AgeI ACCGGT 1 cut(s) 1264
AhdI GACNNNNNGTC 1 cut(s) 2418
AjnI CCWGG 3 cut(s) 932, 1131, 1253
AjuI GAANNNNNNNTTGG 2 cut(s) 2180, 2212
Alw21I GWGCWC 1 cut(s) 2233
Alw26I GTCTC 6 cut(s) 114, 532, 1792, 2469, 2771, 2836
AlwI GGATC 4 cut(s) 944, 1892, 2138, 2790
AlwNI CAGNNNCTG 2 cut(s) 1242, 1801
Ama87I CYCGRG 2 cut(s) 1973, 2056
Aor13HI TCCGGA 1 cut(s) 1491
AoxI GGCC 1 cut(s) 1990
ApeKI GCWGC 9 cut(s) 322, 659, 693, 776, 1236, 2092, 2139, 2142, 2800
ApoI RAATTY 4 cut(s) 372, 730, 1270, 2376
AseI ATTAAT 1 cut(s) 1017
AsiGI ACCGGT 1 cut(s) 1264
AspLEI GCGC 4 cut(s) 918, 1603, 1806, 2226
AspS9I GGNCC 2 cut(s) 1632, 1991
AsuHPI GGTGA 3 cut(s) 107, 975, 1279
AsuII TTCGAA 1 cut(s) 546
AsuNHI GCTAGC 1 cut(s) 1739
AvaI CYCGRG 2 cut(s) 1973, 2056
AvaII GGWCC 1 cut(s) 1632
BaeGI GKGCMC 1 cut(s) 1078
BanI GGYRCC 2 cut(s) 1075, 1261
BanII GRGCYC 1 cut(s) 78
BarI GAAGNNNNNNTAC 2 cut(s) 2185, 2217
BbrPI CACGTG 1 cut(s) 2453
Bbv12I GWGCWC 1 cut(s) 2233
BbvI GCAGC 9 cut(s) 309, 671, 705, 763, 1248, 2079, 2126, 2129, 2812
BccI CCATC 7 cut(s) 373, 713, 961, 1003, 1478, 1492, 1909
BcgI CGANNNNNNTGC 2 cut(s) 2683, 2717
BciT130I CCWGG 3 cut(s) 934, 1133, 1255
BciVI GTATCC 1 cut(s) 2194
BcoDI GTCTC 6 cut(s) 114, 532, 1792, 2469, 2771, 2836
BfmI CTRYAG 3 cut(s) 304, 777, 2512
BfuAI ACCTGC 1 cut(s) 1446
BfuI GTATCC 1 cut(s) 2194
BmcAI AGTACT 1 cut(s) 1206
Bme1390I CCNGG 3 cut(s) 934, 1133, 1255
Bme18I GGWCC 1 cut(s) 1632
BmeRI GACNNNNNGTC 1 cut(s) 2418
BmeT110I CYCGRG 2 cut(s) 1973, 2056
BmgT120I GGNCC 2 cut(s) 1632, 1991
BmiI GGNNCC 5 cut(s) 77, 418, 1077, 1263, 1490
BmrFI CCNGG 3 cut(s) 934, 1133, 1255
BmsI GCATC 5 cut(s) 472, 1197, 1559, 2079, 2681
BmtI GCTAGC 1 cut(s) 1743
BpmI CTGGAG 5 cut(s) 728, 1057, 1425, 1565, 2451
Bpu10I CCTNAGC 1 cut(s) 2796
Bpu14I TTCGAA 1 cut(s) 546
BsaAI YACGTR 2 cut(s) 589, 2453
BsaHI GRCGYC 1 cut(s) 2523
BsaI GGTCTC 1 cut(s) 114
BsaJI CCNNGG 5 cut(s) 672, 1132, 1253, 1254, 2478
BsaWI WCCGGW 2 cut(s) 1264, 1491
BsaXI ACNNNNNCTCC 2 cut(s) 1398, 1428
Bsc4I CCNNNNNNNGG 5 cut(s) 767, 959, 1498, 2314, 2484
Bse118I RCCGGY 1 cut(s) 1264
Bse1I ACTGG 5 cut(s) 1040, 1247, 1408, 1635, 2640
Bse3DI GCAATG 1 cut(s) 703
BseAI TCCGGA 1 cut(s) 1491
BseBI CCWGG 3 cut(s) 934, 1133, 1255
BseDI CCNNGG 5 cut(s) 672, 1132, 1253, 1254, 2478
BseGI GGATG 3 cut(s) 154, 304, 2362
BseLI CCNNNNNNNGG 5 cut(s) 767, 959, 1498, 2314, 2484
BseMI GCAATG 1 cut(s) 703
BseMII CTCAG 1 cut(s) 1199
BseNI ACTGG 5 cut(s) 1040, 1247, 1408, 1635, 2640
BseRI GAGGAG 1 cut(s) 2087
BseSI GKGCMC 1 cut(s) 1078
BseXI GCAGC 9 cut(s) 309, 671, 705, 763, 1248, 2079, 2126, 2129, 2812
BseYI CCCAGC 3 cut(s) 10, 533, 889
BsgI GTGCAG 1 cut(s) 2738
Bsh1236I CGCG 3 cut(s) 1806, 2224, 2546
Bsh1285I CGRYCG 1 cut(s) 2218
BshFI GGCC 1 cut(s) 1992
BshNI GGYRCC 2 cut(s) 1075, 1261
BshTI ACCGGT 1 cut(s) 1264
BsiEI CGRYCG 1 cut(s) 2218
BsiHKAI GWGCWC 1 cut(s) 2233
BsiHKCI CYCGRG 2 cut(s) 1973, 2056
BsiSI CCGG 4 cut(s) 296, 1265, 1492, 2750
BslFI GGGAC 2 cut(s) 2425, 2646
BslI CCNNNNNNNGG 5 cut(s) 767, 959, 1498, 2314, 2484
BsmAI GTCTC 6 cut(s) 114, 532, 1792, 2469, 2771, 2836
BsmBI CGTCTC 1 cut(s) 2771
BsmFI GGGAC 2 cut(s) 2425, 2646
BsnI GGCC 1 cut(s) 1992
Bso31I GGTCTC 1 cut(s) 114
BsoBI CYCGRG 2 cut(s) 1973, 2056
Bsp119I TTCGAA 1 cut(s) 546
Bsp1286I GDGCHC 3 cut(s) 78, 1078, 2233
Bsp13I TCCGGA 1 cut(s) 1491
Bsp143I GATC 9 cut(s) 949, 1438, 1678, 1897, 2097, 2130, 2215, 2782, 2892
Bsp19I CCATGG 1 cut(s) 2478
BspACI CCGC 4 cut(s) 538, 617, 1806, 2546
BspANI GGCC 1 cut(s) 1992
BspCNI CTCAG 1 cut(s) 1200
BspEI TCCGGA 1 cut(s) 1491
BspFNI CGCG 3 cut(s) 1806, 2224, 2546
BspHI TCATGA 1 cut(s) 1525
BspLI GGNNCC 5 cut(s) 77, 418, 1077, 1263, 1490
BspMAI CTGCAG 1 cut(s) 781
BspMI ACCTGC 1 cut(s) 1446
BspOI GCTAGC 1 cut(s) 1743
BspPI GGATC 4 cut(s) 944, 1892, 2138, 2790
BspT104I TTCGAA 1 cut(s) 546
BspT107I GGYRCC 2 cut(s) 1075, 1261
BspTNI GGTCTC 1 cut(s) 114
BsrDI GCAATG 1 cut(s) 703
BsrFI RCCGGY 1 cut(s) 1264
BsrI ACTGG 5 cut(s) 1040, 1247, 1408, 1635, 2640
BssAI RCCGGY 1 cut(s) 1264
BssECI CCNNGG 5 cut(s) 672, 1132, 1253, 1254, 2478
BssMI GATC 9 cut(s) 949, 1438, 1678, 1897, 2097, 2130, 2215, 2782, 2892
BssNI GRCGYC 1 cut(s) 2523
BssT1I CCWWGG 2 cut(s) 672, 2478
Bst2UI CCWGG 3 cut(s) 934, 1133, 1255
Bst4CI ACNGT 3 cut(s) 495, 794, 2890
Bst6I CTCTTC 2 cut(s) 1198, 2211
BstACI GRCGYC 1 cut(s) 2523
BstAPI GCANNNNNTGC 1 cut(s) 25
BstBAI YACGTR 2 cut(s) 589, 2453
BstBI TTCGAA 1 cut(s) 546
BstC8I GCNNGC 8 cut(s) 21, 133, 449, 961, 1741, 2548, 2696, 2717
BstDEI CTNAG 4 cut(s) 1208, 2677, 2768, 2796
BstDSI CCRYGG 1 cut(s) 2478
BstF5I GGATG 3 cut(s) 154, 304, 2362
BstFNI CGCG 3 cut(s) 1806, 2224, 2546
BstHHI GCGC 4 cut(s) 918, 1603, 1806, 2226
BstKTI GATC 9 cut(s) 952, 1441, 1681, 1900, 2100, 2133, 2218, 2785, 2895
BstMAI GTCTC 6 cut(s) 114, 532, 1792, 2469, 2771, 2836
BstMBI GATC 9 cut(s) 949, 1438, 1678, 1897, 2097, 2130, 2215, 2782, 2892
BstMCI CGRYCG 1 cut(s) 2218
BstMWI GCNNNNNNNGC 4 cut(s) 11, 20, 25, 1729
BstNI CCWGG 3 cut(s) 934, 1133, 1255
BstNSI RCATGY 2 cut(s) 1296, 2698
BstSCI CCNGG 3 cut(s) 932, 1131, 1253
BstSFI CTRYAG 3 cut(s) 304, 777, 2512
BstSLI GKGCMC 1 cut(s) 1078
BstUI CGCG 3 cut(s) 1806, 2224, 2546
BstV1I GCAGC 9 cut(s) 309, 671, 705, 763, 1248, 2079, 2126, 2129, 2812
BstX2I RGATCY 1 cut(s) 2782
BstXI CCANNNNNNTGG 1 cut(s) 172
BstYI RGATCY 1 cut(s) 2782
BsuI GTATCC 1 cut(s) 2194
BsuRI GGCC 1 cut(s) 1992
BtgI CCRYGG 1 cut(s) 2478
BtsCI GGATG 3 cut(s) 154, 304, 2362
BtsI GCAGTG 2 cut(s) 23, 1746
BtsIMutI CAGTG 4 cut(s) 23, 799, 1642, 1746
BveI ACCTGC 1 cut(s) 1446
Cac8I GCNNGC 8 cut(s) 21, 133, 449, 961, 1741, 2548, 2696, 2717
CaiI CAGNNNCTG 2 cut(s) 1242, 1801
CciI TCATGA 1 cut(s) 1525
CfoI GCGC 4 cut(s) 918, 1603, 1806, 2226
Cfr10I RCCGGY 1 cut(s) 1264
Cfr13I GGNCC 2 cut(s) 1632, 1991
CseI GACGC 4 cut(s) 1732, 2134, 2259, 2512
Csp6I GTAC 3 cut(s) 586, 1205, 1364
CspAI ACCGGT 1 cut(s) 1264
CviQI GTAC 3 cut(s) 586, 1205, 1364
DdeI CTNAG 4 cut(s) 1208, 2677, 2768, 2796
DpnI GATC 9 cut(s) 951, 1440, 1680, 1899, 2099, 2132, 2217, 2784, 2894
DpnII GATC 9 cut(s) 949, 1438, 1678, 1897, 2097, 2130, 2215, 2782, 2892
DriI GACNNNNNGTC 1 cut(s) 2418
Eam1104I CTCTTC 2 cut(s) 1198, 2211
Eam1105I GACNNNNNGTC 1 cut(s) 2418
EarI CTCTTC 2 cut(s) 1198, 2211
Eco130I CCWWGG 2 cut(s) 672, 2478
Eco24I GRGCYC 1 cut(s) 78
Eco31I GGTCTC 1 cut(s) 114
Eco47I GGWCC 1 cut(s) 1632
Eco57I CTGAAG 7 cut(s) 427, 495, 544, 648, 1179, 1452, 2751
Eco72I CACGTG 1 cut(s) 2453
Eco88I CYCGRG 2 cut(s) 1973, 2056
EcoRI GAATTC 3 cut(s) 372, 730, 1270
EcoRII CCWGG 3 cut(s) 932, 1131, 1253
EcoT14I CCWWGG 2 cut(s) 672, 2478
EcoT22I ATGCAT 1 cut(s) 2696
EcoT38I GRGCYC 1 cut(s) 78
ErhI CCWWGG 2 cut(s) 672, 2478
Esp3I CGTCTC 1 cut(s) 2771
FaqI GGGAC 2 cut(s) 2425, 2646
FauI CCCGC 2 cut(s) 1799, 2539
FokI GGATG 3 cut(s) 161, 311, 2369
FriOI GRGCYC 1 cut(s) 78
FspI TGCGCA 1 cut(s) 1602
GlaI GCGC 4 cut(s) 917, 1602, 1805, 2225
GsaI CCCAGC 3 cut(s) 14, 537, 893
GsuI CTGGAG 5 cut(s) 728, 1057, 1425, 1565, 2451
HaeIII GGCC 1 cut(s) 1992
HapII CCGG 4 cut(s) 296, 1265, 1492, 2750
HgaI GACGC 4 cut(s) 1732, 2134, 2259, 2512
HhaI GCGC 4 cut(s) 918, 1603, 1806, 2226
Hin1I GRCGYC 1 cut(s) 2523
Hin6I GCGC 4 cut(s) 916, 1601, 1804, 2224
HinP1I GCGC 4 cut(s) 916, 1601, 1804, 2224
HincII GTYRAC 2 cut(s) 580, 744
HindII GTYRAC 2 cut(s) 580, 744
HindIII AAGCTT 2 cut(s) 1220, 2194
HpaI GTTAAC 1 cut(s) 580
HpaII CCGG 4 cut(s) 296, 1265, 1492, 2750
HphI GGTGA 3 cut(s) 107, 975, 1279
Hpy166II GTNNAC 4 cut(s) 580, 744, 1129, 1999
Hpy188III TCNNGA 9 cut(s) 49, 99, 707, 1492, 1526, 1544, 1877, 2080, 2468
Hpy8I GTNNAC 4 cut(s) 580, 744, 1129, 1999
HpyCH4III ACNGT 3 cut(s) 495, 794, 2890
HpyCH4IV ACGT 4 cut(s) 588, 990, 2452, 2754
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 20, 25, 1729
HpyF3I CTNAG 4 cut(s) 1208, 2677, 2768, 2796
HpySE526I ACGT 4 cut(s) 588, 990, 2452, 2754
Hsp92I GRCGYC 1 cut(s) 2523
HspAI GCGC 4 cut(s) 916, 1601, 1804, 2224
Kpn2I TCCGGA 1 cut(s) 1491
KspAI GTTAAC 1 cut(s) 580
Kzo9I GATC 9 cut(s) 949, 1438, 1678, 1897, 2097, 2130, 2215, 2782, 2892
LmnI GCTCC 4 cut(s) 81, 709, 827, 1386
Lsp1109I GCAGC 9 cut(s) 309, 671, 705, 763, 1248, 2079, 2126, 2129, 2812
LweI GCATC 5 cut(s) 472, 1197, 1559, 2079, 2681
MaeII ACGT 4 cut(s) 588, 990, 2452, 2754
MalI GATC 9 cut(s) 951, 1440, 1680, 1899, 2099, 2132, 2217, 2784, 2894
MboI GATC 9 cut(s) 949, 1438, 1678, 1897, 2097, 2130, 2215, 2782, 2892
MflI RGATCY 1 cut(s) 2782
MhlI GDGCHC 3 cut(s) 78, 1078, 2233
MlyI GAGTC 2 cut(s) 2428, 2700
MmeI TCCRAC 4 cut(s) 217, 805, 955, 2134
Mph1103I ATGCAT 1 cut(s) 2696
MroI TCCGGA 1 cut(s) 1491
MslI CAYNNNNRTG 4 cut(s) 468, 819, 1851, 2888
MspA1I CMGCKG 2 cut(s) 776, 959
MspI CCGG 4 cut(s) 296, 1265, 1492, 2750
MspR9I CCNGG 3 cut(s) 934, 1133, 1255
MvaI CCWGG 3 cut(s) 934, 1133, 1255
MvnI CGCG 3 cut(s) 1806, 2224, 2546
MwoI GCNNNNNNNGC 4 cut(s) 11, 20, 25, 1729
NcoI CCATGG 1 cut(s) 2478
NdeII GATC 9 cut(s) 949, 1438, 1678, 1897, 2097, 2130, 2215, 2782, 2892
NheI GCTAGC 1 cut(s) 1739
NlaIV GGNNCC 5 cut(s) 77, 418, 1077, 1263, 1490
NmuCI GTSAC 6 cut(s) 456, 495, 863, 1277, 1637, 1744
NsbI TGCGCA 1 cut(s) 1602
NsiI ATGCAT 1 cut(s) 2696
NspI RCATGY 2 cut(s) 1296, 2698
NspV TTCGAA 1 cut(s) 546
PaeI GCATGC 1 cut(s) 2698
PagI TCATGA 1 cut(s) 1525
PasI CCCWGGG 1 cut(s) 1254
PciI ACATGT 1 cut(s) 1292
PflMI CCANNNNNTGG 2 cut(s) 767, 959
PinAI ACCGGT 1 cut(s) 1264
Ple19I CGATCG 1 cut(s) 2218
PleI GAGTC 2 cut(s) 2427, 2700
PmaCI CACGTG 1 cut(s) 2453
PmlI CACGTG 1 cut(s) 2453
PpsI GAGTC 2 cut(s) 2427, 2700
Ppu21I YACGTR 2 cut(s) 589, 2453
PscI ACATGT 1 cut(s) 1292
PshBI ATTAAT 1 cut(s) 1017
PsiI TTATAA 1 cut(s) 356
Psp6I CCWGG 3 cut(s) 932, 1131, 1253
PspCI CACGTG 1 cut(s) 2453
PspFI CCCAGC 3 cut(s) 10, 533, 889
PspGI CCWGG 3 cut(s) 932, 1131, 1253
PspN4I GGNNCC 5 cut(s) 77, 418, 1077, 1263, 1490
PspPI GGNCC 2 cut(s) 1632, 1991
PsrI GAACNNNNNNTAC 2 cut(s) 400, 432
PstI CTGCAG 1 cut(s) 781
PstNI CAGNNNCTG 2 cut(s) 1242, 1801
PsuI RGATCY 1 cut(s) 2782
PvuI CGATCG 1 cut(s) 2218
PvuII CAGCTG 2 cut(s) 776, 959
RsaI GTAC 3 cut(s) 587, 1206, 1365
RsaNI GTAC 3 cut(s) 586, 1205, 1364
RseI CAYNNNNRTG 4 cut(s) 468, 819, 1851, 2888
Sau3AI GATC 9 cut(s) 949, 1438, 1678, 1897, 2097, 2130, 2215, 2782, 2892
Sau96I GGNCC 2 cut(s) 1632, 1991
ScaI AGTACT 1 cut(s) 1206
SchI GAGTC 2 cut(s) 2428, 2700
ScrFI CCNGG 3 cut(s) 934, 1133, 1255
SduI GDGCHC 3 cut(s) 78, 1078, 2233
SfaNI GCATC 5 cut(s) 472, 1197, 1559, 2079, 2681
SfcI CTRYAG 3 cut(s) 304, 777, 2512
SfuI TTCGAA 1 cut(s) 546
SgrAI CRCCGGYG 1 cut(s) 1264
SinI GGWCC 1 cut(s) 1632
SmiMI CAYNNNNRTG 4 cut(s) 468, 819, 1851, 2888
SphI GCATGC 1 cut(s) 2698
SsiI CCGC 4 cut(s) 538, 617, 1806, 2546
SspI AATATT 4 cut(s) 195, 751, 2260, 2860
StyD4I CCNGG 3 cut(s) 932, 1131, 1253
StyI CCWWGG 2 cut(s) 672, 2478
TaaI ACNGT 3 cut(s) 495, 794, 2890
TaiI ACGT 4 cut(s) 591, 993, 2455, 2757
TaqI TCGA 8 cut(s) 213, 546, 897, 1025, 1536, 2214, 2218, 2895
TatI WGTACW 1 cut(s) 1204
TauI GCSGC 1 cut(s) 540
TscAI CASTG 4 cut(s) 30, 799, 1642, 1753
TseFI GTSAC 6 cut(s) 456, 495, 863, 1277, 1637, 1744
TseI GCWGC 9 cut(s) 322, 659, 693, 776, 1236, 2092, 2139, 2142, 2800
Tsp45I GTSAC 6 cut(s) 456, 495, 863, 1277, 1637, 1744
TspGWI ACGGA 3 cut(s) 1215, 1407, 2795
TspRI CASTG 4 cut(s) 30, 799, 1642, 1753
Van91I CCANNNNNTGG 2 cut(s) 767, 959
VpaK11BI GGWCC 1 cut(s) 1632
VspI ATTAAT 1 cut(s) 1017
XapI RAATTY 4 cut(s) 372, 730, 1270, 2376
XbaI TCTAGA 1 cut(s) 98
XceI RCATGY 2 cut(s) 1296, 2698
ZrmI AGTACT 1 cut(s) 1206
Zsp2I ATGCAT 1 cut(s) 2696
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.