Rroxscaffold_6G00389570

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
Physical Location & Seq
Forward (+)
3381411 .. 3390591
9181 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00389570.1

Sequence Viewer

Length: 3177 bp
ATGAGATTACTTCTTCACATCCCATATCCAATGGGTATTGAATCTGAAACTGTTAGCTGCTTAAATCTCTCAATGTTCTTCTTATTCATCTTAATCTTGCTTCCACCACATTATCATTGTTCTCAATTTTATAACATCACTCCTTCGCAACCGTTGGTACCGGGCGACACTCTTGTCTCCCCTAGAGGCATTTTCGAATTAGGCTTCTTCAGTCCTAATGGTTCTACTAATAAGTATGTGGGGATGTGGCACAAGAATATATTTCCCCGTAAAGTAGTGTGGGTGGCCAACAGGGAAAAGCCCATTGCAGTTACAGGCTCATTGGCGAGTTTGAGAATTAGCAGCAATGGGAGTCTGAAGCTTGTAGATGGGAAGCAGAATTCTGTGTGGTCAACCAATGCTACTATACAGGTTTCATCATCTAATAGTAGTTCATTTGCTGCAGTTCTTTCAGATGAAGGAAACTTTGTTGTCAAAGATGTTATTAGAGCTGGTGAATCAATATGGCAGAGCTTTCATCATCCTTGTGACACTTTGCTACCAACCCAGCAGCTTGGATACATTTTTAAATCTAAAAAGGGCACTTTCTTGACTGCCTGGAAAAATGAGAGTGACCCATCTAGTGGGATATATACAGTTGGATTCCGACAGGCACCAGAGACGCCACCACAAGTAATCATTTGGGTTAATCGATCAACTCCTTACTGGAGAAGTGGGCCATGGGATAAGTCAAAGTTCATCGGCATGCCAGACATGGATGATCAATATCTTAGTGGATTTAAACTAGAAGAGAATGTGGAAAAGGGGACAAAGTATTTCTCATTTAAATTATTTGACACTTCCGCAGCATATCTACACATCTCTTCACAGGGAAATCCAAAGCTTATGTATTCAAAAAATGGTCGGAACTGGTCACTCTACTGGGAGACAAAAAAGAATTCATGTGACATCTATGGAGCATGTGGGCCTTTTGGGGTTTGCAACATCTCTGAATCTCCAATCTGCAAGTGTTTGAAAGGGTTTGTGCCAAGTTCAAAACAGGAATGGAGCAAAGGAAACCGGACAGCTGGGTGCGTAAGGCAAACCGACTTGTTCTGTGAGAGACAAACAGATAAGAAGTCACTCTCATTGCAAGGAAAACAAGGTTATAATAATGATAAGTTTTGGAAGATGACAGGGGTAAAAGTGCCAGATTATCATCAGTATAATACATCTTTGAATACTCATGGTGACATCAATGACTGCAAGATACAGTGCCTAAATAATTGTTCTTGCCTGGCTTATGCATTTCTTAATAATATTGGGTGTTTGACCTGGTCCAAACCCCTTATAGATATACAGAAGTTCTCCAAGGGAGGTGTTGATCTTTATATTCGCCTAGCATGCAAAGAATTAGGTGAAGGAAAGCCAATTAAGTTTATTGCCAGCCTTACAGCTGTTGGTTTAATGATAATCTTGGTTGCCATAGCGGTCGGTTTGCACAGGTTGCGAGCTAACCAAAAGGGATCAAGTCCAACTTCTAGGGATACTCTTCTAGTACATATTGGAAAGTATGATCCATCAGAGCTATTGATCTATGATTTTGATACCATGTTAGCTGCCACAAACAATTTCAGCATTACAAACAAACTCGGGCAAGGAGGCTTTGGTCCTGTTTATAAGGGTATACTACAGGATGGGAAGGAAATAGCTGTAAAAAGACTATCTAGTAGCTCAGGACAAGGCATTGAAGAGTTCAAGAATGAGATGCTGTTGATCTCCAATCTTCAACACAAAAATCTTGTTAGGATGATGGGTTGCTGCGTTAAAGAAGATGAGAAGTTGCTGGTTTATGAGTTCATGCCAAACAAAAGCTTGGATACGTTTTTATTCGAGCCAATGAGGAGAGGAATGCTTGATTGGGATAGACGCTTTAATATTATTCAGGGTATTGCTAGAGGGCTTCTTTATCTCCATCATGATTCCTATGTGAAGGCATGGAACTTGTGGTATGAAGGCAGGGGATTGGAGTTGGTGGATGAAGCATTGGGTGATTCATATTGCTCATCAGAAGTATTGAAATGTGTGCACATTGGGCTTCTTTGTGTACAAGATAATGCTGCGGATAGGCCTACCATGAAGGATATTGCTTTGATGTTAAGTAACAAGACAGATGGTCCACAACCTAAGAGGCCTCTATTCACTATCCAAAACTCATTTTCTCGTCCTCAACTACTGTATGAACATACCAAGTCCTCCACAAATGAAGCTACCATTACAGATCTTAGAGCTGCAATGTTTTATGCAAAGGTGGGAGATGCTGCGATGATGTATACAGGAGACTATAATATGGCACCAGGGTTGGGAGGAACGCGCCCCACGCGCGAGGAAAAAGGAGGAAGCCCGACGGTGTTCGTTTCTCTCCCGGCCGAGCGCTACCAGCGATCCCGCCGCTGCGTTCCGGCCCGGGAGAGGATGCCGGTGATGATTGGTGGAAGGCCCTTAGTGCAGAGATGCGGTCCAGAGGAGGAGCGTGGACTCTTGATTTCGGGTTGGGCAGATCGTTCTCGATCTGTCCTTCTAGGTTCAGGGGCGACGACGGCTGAGATATTGTGGCGGTTGGTTTCTTTCCGGCGGTGGGACACGGCGTTATCGCATAGGTTGGCTGAATCGTGGTGGAGGCGGTCAAATCGCGGCAGAAGGGTTCACTGTAGGGAGATGTTTCTATCTTGCGTTTGGATCTGGGTGAGGTTGTCAACAGGATGTAGATTCTGTTTGCACCTTGGCAAGGTGGAGTGGCGGTGTCAGGCAACGGTGAGGCAGTGGGATGATGACGATGGTGGTTGCCGGCGGTGGGAATGGTTGTCTGCAGACGAGGACGAATTTGTTCAAATCGGTTTACTTTTGTTGTCGATTTGCGATAAGCGATCCTTTACACGTGGTCTAGCACTTTCGGACACGGTGTTGAAGAGGACGCTGTCTTCTTCGCAGTTGATTACGAGTTTTCAGGTCGGTTACTATGAGTACCGACTGCGAGGCATGGTTTTATCTCGGCATAGATGGACGGGGAGATATGAAGCTCGTTTATGGAACAAAGGGTCTTGGAATGCCACACAAAGGAAGAAGGGAAAACAGGTAAGGGCTTATGATGAAGAAGAATCCACAACAAAAGCATATGAGTTGGCAGCACTCAAGTAG

Protein Analysis

1058

Amino Acids

119.88

Weight (kDa)

9.19

Isoelectric Point (pI)

44.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 92 - 201 6e-28 D-mannose binding lectin
S_locus_glycop PF00954 236 - 344 3.8e-29 S-locus glycoprotein domain
PAN_2 PF08276 384 - 446 4.4e-14 PAN-like domain
Pkinase PF00069 539 - 654 3.4e-17 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 540 - 657 3.1e-21 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 132, 1149, 1659
AasI GACNNNNNNGTC 1 cut(s) 173
Acc65I GGTACC 1 cut(s) 157
AccB1I GGYRCC 3 cut(s) 157, 652, 2332
AccB7I CCANNNNNTGG 1 cut(s) 623
AccI GTMKAC 2 cut(s) 1666, 2312
AccII CGCG 4 cut(s) 2353, 2362, 2364, 2673
AclWI GGATC 5 cut(s) 1513, 1550, 2418, 2726, 2901
AcoI YGGCCR 2 cut(s) 285, 2406
AcsI RAATTY 3 cut(s) 379, 937, 2861
AcuI CTGAAG 2 cut(s) 193, 377
AcvI CACGTG 1 cut(s) 2918
AcyI GRCGYC 1 cut(s) 662
AfaI GTAC 4 cut(s) 159, 1539, 2088, 3005
AfeI AGCGCT 1 cut(s) 2414
AfiI CCNNNNNNNGG 7 cut(s) 623, 2342, 2451, 2617, 2767, 2833, 3096
AflIII ACRYGT 1 cut(s) 2915
AhdI GACNNNNNGTC 1 cut(s) 2154
AjnI CCWGG 4 cut(s) 596, 1275, 1313, 2335
AjuI GAANNNNNNNTTGG 2 cut(s) 1882, 1914
Alw21I GWGCWC 1 cut(s) 2070
Alw26I GTCTC 5 cut(s) 181, 653, 920, 1096, 2313
Alw44I GTGCAC 1 cut(s) 2066
AlwI GGATC 5 cut(s) 1513, 1550, 2418, 2726, 2901
Ama87I CYCGRG 2 cut(s) 1631, 2445
Aor51HI AGCGCT 1 cut(s) 2414
AoxI GGCC 8 cut(s) 285, 716, 965, 2108, 2171, 2406, 2442, 2477
ApaLI GTGCAC 1 cut(s) 2066
ApoI RAATTY 3 cut(s) 379, 937, 2861
Asp700I GAANNNNTTC 1 cut(s) 2865
Asp718I GGTACC 1 cut(s) 157
AspLEI GCGC 3 cut(s) 2355, 2364, 2415
AspS9I GGNCC 8 cut(s) 716, 965, 1317, 1649, 2156, 2443, 2478, 2498
AsuC2I CCSGG 4 cut(s) 162, 2405, 2446, 2447
AsuHPI GGTGA 7 cut(s) 506, 1241, 1409, 2042, 2473, 2737, 2806
AsuII TTCGAA 1 cut(s) 195
AvaI CYCGRG 2 cut(s) 1631, 2445
AvaII GGWCC 4 cut(s) 1317, 1649, 2156, 2498
BaeGI GKGCMC 2 cut(s) 584, 2070
BalI TGGCCA 1 cut(s) 287
BanI GGYRCC 3 cut(s) 157, 652, 2332
BbrPI CACGTG 1 cut(s) 2918
BbsI GAAGAC 1 cut(s) 2952
Bbv12I GWGCWC 1 cut(s) 2070
BccI CCATC 9 cut(s) 362, 625, 1567, 1670, 1786, 1962, 2147, 2810, 3033
BceAI ACGGC 2 cut(s) 2595, 2640
BciT130I CCWGG 4 cut(s) 598, 1277, 1315, 2337
BciVI GTATCC 3 cut(s) 551, 1519, 1852
BclI TGATCA 1 cut(s) 760
BcnI CCSGG 4 cut(s) 162, 2405, 2446, 2447
BcoDI GTCTC 5 cut(s) 181, 653, 920, 1096, 2313
BfmI CTRYAG 4 cut(s) 441, 1670, 2689, 2847
BfoI RGCGCY 1 cut(s) 2416
BfuI GTATCC 3 cut(s) 551, 1519, 1852
BglII AGATCT 1 cut(s) 2260
Bme1390I CCNGG 8 cut(s) 162, 598, 1277, 1315, 2337, 2405, 2446, 2447
Bme18I GGWCC 4 cut(s) 1317, 1649, 2156, 2498
BmeRI GACNNNNNGTC 1 cut(s) 2154
BmeT110I CYCGRG 2 cut(s) 1631, 2445
BmgT120I GGNCC 8 cut(s) 716, 965, 1317, 1649, 2156, 2443, 2478, 2498
BmiI GGNNCC 3 cut(s) 159, 654, 2334
BmrFI CCNGG 8 cut(s) 162, 598, 1277, 1315, 2337, 2405, 2446, 2447
BmrI ACTGGG 1 cut(s) 931
BmsI GCATC 4 cut(s) 1737, 2287, 2445, 2483
BmuI ACTGGG 1 cut(s) 931
BpiI GAAGAC 1 cut(s) 2952
BpmI CTGGAG 1 cut(s) 727
Bpu10I CCTNAGC 1 cut(s) 1714
Bpu14I TTCGAA 1 cut(s) 195
BpuEI CTTGAG 1 cut(s) 3155
BpuMI CCSGG 4 cut(s) 162, 2405, 2446, 2447
Bsa29I ATCGAT 1 cut(s) 691
BsaAI YACGTR 1 cut(s) 2918
BsaBI GATNNNNATC 2 cut(s) 765, 1197
BsaHI GRCGYC 1 cut(s) 662
BsaJI CCNNGG 5 cut(s) 719, 1350, 2336, 2445, 2761
BsaWI WCCGGW 1 cut(s) 1059
BsaXI ACNNNNNCTCC 2 cut(s) 2765, 2795
Bsc4I CCNNNNNNNGG 7 cut(s) 623, 2342, 2451, 2617, 2767, 2833, 3096
Bse118I RCCGGY 2 cut(s) 2458, 2826
Bse1I ACTGG 3 cut(s) 710, 914, 926
Bse3DI GCAATG 4 cut(s) 303, 352, 1127, 2280
Bse8I GATNNNNATC 2 cut(s) 765, 1197
BseBI CCWGG 4 cut(s) 598, 1277, 1315, 2337
BseCI ATCGAT 1 cut(s) 691
BseDI CCNNGG 5 cut(s) 719, 1350, 2336, 2445, 2761
BseJI GATNNNNATC 2 cut(s) 765, 1197
BseLI CCNNNNNNNGG 7 cut(s) 623, 2342, 2451, 2617, 2767, 2833, 3096
BseMI GCAATG 4 cut(s) 303, 352, 1127, 2280
BseMII CTCAG 2 cut(s) 1728, 2574
BseNI ACTGG 3 cut(s) 710, 914, 926
BseRI GAGGAG 3 cut(s) 1897, 2519, 2522
BseSI GKGCMC 2 cut(s) 584, 2070
BseX3I CGGCCG 1 cut(s) 2406
BseYI CCCAGC 2 cut(s) 546, 1067
BsgI GTGCAG 1 cut(s) 2507
Bsh1236I CGCG 4 cut(s) 2353, 2362, 2364, 2673
Bsh1285I CGRYCG 2 cut(s) 1473, 2409
BshFI GGCC 8 cut(s) 287, 718, 967, 2110, 2173, 2408, 2444, 2479
BshNI GGYRCC 3 cut(s) 157, 652, 2332
BshVI ATCGAT 1 cut(s) 691
BsiEI CGRYCG 2 cut(s) 1473, 2409
BsiHKAI GWGCWC 1 cut(s) 2070
BsiHKCI CYCGRG 2 cut(s) 1631, 2445
BsiSI CCGG 8 cut(s) 161, 1060, 2405, 2441, 2446, 2459, 2611, 2827
BslFI GGGAC 2 cut(s) 820, 2633
BslI CCNNNNNNNGG 7 cut(s) 623, 2342, 2451, 2617, 2767, 2833, 3096
BsmAI GTCTC 5 cut(s) 181, 653, 920, 1096, 2313
BsmBI CGTCTC 1 cut(s) 653
BsmFI GGGAC 2 cut(s) 820, 2633
BsmI GAATGC 2 cut(s) 1896, 3091
BsnI GGCC 8 cut(s) 287, 718, 967, 2110, 2173, 2408, 2444, 2479
BsoBI CYCGRG 2 cut(s) 1631, 2445
Bsp119I TTCGAA 1 cut(s) 195
Bsp1286I GDGCHC 2 cut(s) 584, 2070
Bsp1407I TGTACA 1 cut(s) 2086
Bsp19I CCATGG 1 cut(s) 719
BspANI GGCC 8 cut(s) 287, 718, 967, 2110, 2173, 2408, 2444, 2479
BspCNI CTCAG 2 cut(s) 1727, 2575
BspDI ATCGAT 1 cut(s) 691
BspFNI CGCG 4 cut(s) 2353, 2362, 2364, 2673
BspHI TCATGA 1 cut(s) 1957
BspLI GGNNCC 3 cut(s) 159, 654, 2334
BspMAI CTGCAG 2 cut(s) 445, 2851
BspPI GGATC 5 cut(s) 1513, 1550, 2418, 2726, 2901
BspT104I TTCGAA 1 cut(s) 195
BspT107I GGYRCC 3 cut(s) 157, 652, 2332
BsrDI GCAATG 4 cut(s) 303, 352, 1127, 2280
BsrFI RCCGGY 2 cut(s) 2458, 2826
BsrGI TGTACA 1 cut(s) 2086
BsrI ACTGG 3 cut(s) 710, 914, 926
BssAI RCCGGY 2 cut(s) 2458, 2826
BssECI CCNNGG 5 cut(s) 719, 1350, 2336, 2445, 2761
BssNAI GTATAC 2 cut(s) 1667, 2313
BssNI GRCGYC 1 cut(s) 662
BssT1I CCWWGG 3 cut(s) 719, 1350, 2761
Bst1107I GTATAC 2 cut(s) 1667, 2313
Bst2UI CCWGG 4 cut(s) 598, 1277, 1315, 2337
Bst4CI ACNGT 9 cut(s) 52, 153, 637, 1254, 2217, 2389, 2690, 2794, 2941
Bst6I CTCTTC 5 cut(s) 783, 868, 1536, 1725, 2942
BstACI GRCGYC 1 cut(s) 662
BstAPI GCANNNNNTGC 1 cut(s) 1486
BstAUI TGTACA 1 cut(s) 2086
BstBAI YACGTR 1 cut(s) 2918
BstBI TTCGAA 1 cut(s) 195
BstC8I GCNNGC 5 cut(s) 746, 1384, 1426, 1491, 2828
BstDEI CTNAG 6 cut(s) 770, 1714, 2166, 2264, 2482, 2583
BstDSI CCRYGG 1 cut(s) 719
BstENI CCTNNNNNAGG 1 cut(s) 2765
BstFNI CGCG 4 cut(s) 2353, 2362, 2364, 2673
BstH2I RGCGCY 1 cut(s) 2416
BstHHI GCGC 3 cut(s) 2355, 2364, 2415
BstMAI GTCTC 5 cut(s) 181, 653, 920, 1096, 2313
BstMCI CGRYCG 2 cut(s) 1473, 2409
BstMWI GCNNNNNNNGC 8 cut(s) 1383, 1486, 2074, 2359, 2361, 2419, 2485, 2579
BstNI CCWGG 4 cut(s) 598, 1277, 1315, 2337
BstNSI RCATGY 3 cut(s) 748, 963, 1386
BstSCI CCNGG 8 cut(s) 160, 596, 1275, 1313, 2335, 2403, 2444, 2445
BstSFI CTRYAG 4 cut(s) 441, 1670, 2689, 2847
BstSLI GKGCMC 2 cut(s) 584, 2070
BstUI CGCG 4 cut(s) 2353, 2362, 2364, 2673
BstV2I GAAGAC 1 cut(s) 2952
BstX2I RGATCY 2 cut(s) 2260, 2718
BstXI CCANNNNNNTGG 1 cut(s) 554
BstYI RGATCY 2 cut(s) 2260, 2718
BstZ17I GTATAC 2 cut(s) 1667, 2313
BstZI CGGCCG 1 cut(s) 2406
Bsu15I ATCGAT 1 cut(s) 691
BsuI GTATCC 3 cut(s) 551, 1519, 1852
BsuRI GGCC 8 cut(s) 287, 718, 967, 2110, 2173, 2408, 2444, 2479
BsuTUI ATCGAT 1 cut(s) 691
BtgI CCRYGG 1 cut(s) 719
BtgZI GCGATG 1 cut(s) 2318
BtsI GCAGTG 1 cut(s) 2807
BtsIMutI CAGTG 3 cut(s) 1259, 2686, 2807
Cac8I GCNNGC 5 cut(s) 746, 1384, 1426, 1491, 2828
CciI TCATGA 1 cut(s) 1957
CfoI GCGC 3 cut(s) 2355, 2364, 2415
Cfr10I RCCGGY 2 cut(s) 2458, 2826
Cfr13I GGNCC 8 cut(s) 716, 965, 1317, 1649, 2156, 2443, 2478, 2498
Cfr9I CCCGGG 1 cut(s) 2445
ClaI ATCGAT 1 cut(s) 691
CseI GACGC 3 cut(s) 670, 1917, 2962
CsiI ACCWGGT 1 cut(s) 1313
Csp6I GTAC 4 cut(s) 158, 1538, 2087, 3004
CviQI GTAC 4 cut(s) 158, 1538, 2087, 3004
DdeI CTNAG 6 cut(s) 770, 1714, 2166, 2264, 2482, 2583
DraI TTTAAA 3 cut(s) 568, 781, 826
DrdI GACNNNNNNGTC 1 cut(s) 173
DriI GACNNNNNGTC 1 cut(s) 2154
DseDI GACNNNNNNGTC 1 cut(s) 173
EaeI YGGCCR 2 cut(s) 285, 2406
EagI CGGCCG 1 cut(s) 2406
Eam1104I CTCTTC 5 cut(s) 783, 868, 1536, 1725, 2942
Eam1105I GACNNNNNGTC 1 cut(s) 2154
EarI CTCTTC 5 cut(s) 783, 868, 1536, 1725, 2942
EclXI CGGCCG 1 cut(s) 2406
Eco130I CCWWGG 3 cut(s) 719, 1350, 2761
Eco147I AGGCCT 2 cut(s) 2110, 2173
Eco47I GGWCC 4 cut(s) 1317, 1649, 2156, 2498
Eco47III AGCGCT 1 cut(s) 2414
Eco52I CGGCCG 1 cut(s) 2406
Eco57I CTGAAG 2 cut(s) 193, 377
Eco72I CACGTG 1 cut(s) 2918
Eco88I CYCGRG 2 cut(s) 1631, 2445
EcoNI CCTNNNNNAGG 1 cut(s) 2765
EcoO109I RGGNCCY 1 cut(s) 2478
EcoRI GAATTC 2 cut(s) 379, 937
EcoRII CCWGG 4 cut(s) 596, 1275, 1313, 2335
EcoT14I CCWWGG 3 cut(s) 719, 1350, 2761
EcoT22I ATGCAT 1 cut(s) 1288
ErhI CCWWGG 3 cut(s) 719, 1350, 2761
Esp3I CGTCTC 1 cut(s) 653
FalI AAGNNNNNCTT 4 cut(s) 1501, 1533, 2894, 2926
FaqI GGGAC 2 cut(s) 820, 2633
FauI CCCGC 1 cut(s) 2435
FauNDI CATATG 1 cut(s) 3154
FbaI TGATCA 1 cut(s) 760
FblI GTMKAC 2 cut(s) 1666, 2312
GlaI GCGC 3 cut(s) 2354, 2363, 2414
GsaI CCCAGC 2 cut(s) 550, 1071
GsuI CTGGAG 1 cut(s) 727
HaeII RGCGCY 1 cut(s) 2416
HaeIII GGCC 8 cut(s) 287, 718, 967, 2110, 2173, 2408, 2444, 2479
HapII CCGG 8 cut(s) 161, 1060, 2405, 2441, 2446, 2459, 2611, 2827
HgaI GACGC 3 cut(s) 670, 1917, 2962
HhaI GCGC 3 cut(s) 2355, 2364, 2415
Hin1I GRCGYC 1 cut(s) 662
Hin6I GCGC 3 cut(s) 2353, 2362, 2413
HinP1I GCGC 3 cut(s) 2353, 2362, 2413
HincII GTYRAC 2 cut(s) 393, 2736
HindII GTYRAC 2 cut(s) 393, 2736
HindIII AAGCTT 3 cut(s) 359, 881, 1852
HpaII CCGG 8 cut(s) 161, 1060, 2405, 2441, 2446, 2459, 2611, 2827
HphI GGTGA 7 cut(s) 506, 1241, 1409, 2042, 2473, 2737, 2806
Hpy188I TCNGA 9 cut(s) 46, 357, 454, 647, 906, 991, 1564, 2050, 2935
Hpy188III TCNNGA 7 cut(s) 589, 1716, 1738, 1958, 2501, 2521, 2547
Hpy99I CGWCG 3 cut(s) 2389, 2578, 2581
HpyCH4III ACNGT 9 cut(s) 52, 153, 637, 1254, 2217, 2389, 2690, 2794, 2941
HpyCH4IV ACGT 2 cut(s) 1862, 2917
HpyF10VI GCNNNNNNNGC 8 cut(s) 1383, 1486, 2074, 2359, 2361, 2419, 2485, 2579
HpyF3I CTNAG 6 cut(s) 770, 1714, 2166, 2264, 2482, 2583
HpySE526I ACGT 2 cut(s) 1862, 2917
Hsp92I GRCGYC 1 cut(s) 662
HspAI GCGC 3 cut(s) 2353, 2362, 2413
KpnI GGTACC 1 cut(s) 161
KroI GCCGGC 1 cut(s) 2826
KroNI GCCGGC 1 cut(s) 2828
Ksp22I TGATCA 1 cut(s) 760
LmnI GCTCC 3 cut(s) 956, 1047, 2509
LweI GCATC 4 cut(s) 1737, 2287, 2445, 2483
MabI ACCWGGT 1 cut(s) 1313
MaeII ACGT 2 cut(s) 1862, 2917
MaeIII GTNAC 9 cut(s) 310, 527, 611, 912, 944, 1119, 1229, 2141, 2993
MflI RGATCY 2 cut(s) 2260, 2718
MhlI GDGCHC 2 cut(s) 584, 2070
MlsI TGGCCA 1 cut(s) 287
MluNI TGGCCA 1 cut(s) 287
MlyI GAGTC 2 cut(s) 361, 2511
MmeI TCCRAC 4 cut(s) 619, 670, 884, 1538
Mox20I TGGCCA 1 cut(s) 287
Mph1103I ATGCAT 1 cut(s) 1288
MroNI GCCGGC 1 cut(s) 2826
MroXI GAANNNNTTC 1 cut(s) 2865
MscI TGGCCA 1 cut(s) 287
MslI CAYNNNNRTG 2 cut(s) 525, 743
Msp20I TGGCCA 1 cut(s) 287
MspA1I CMGCKG 3 cut(s) 1067, 1436, 2433
MspI CCGG 8 cut(s) 161, 1060, 2405, 2441, 2446, 2459, 2611, 2827
MspR9I CCNGG 8 cut(s) 162, 598, 1277, 1315, 2337, 2405, 2446, 2447
Mva1269I GAATGC 2 cut(s) 1896, 3091
MvaI CCWGG 4 cut(s) 598, 1277, 1315, 2337
MvnI CGCG 4 cut(s) 2353, 2362, 2364, 2673
MwoI GCNNNNNNNGC 8 cut(s) 1383, 1486, 2074, 2359, 2361, 2419, 2485, 2579
NaeI GCCGGC 1 cut(s) 2828
NciI CCSGG 4 cut(s) 162, 2405, 2446, 2447
NcoI CCATGG 1 cut(s) 719
NdeI CATATG 1 cut(s) 3154
NgoMIV GCCGGC 1 cut(s) 2826
NlaIV GGNNCC 3 cut(s) 159, 654, 2334
NmeAIII GCCGAG 2 cut(s) 2434, 3010
NmuCI GTSAC 6 cut(s) 527, 611, 912, 944, 1119, 1229
NsiI ATGCAT 1 cut(s) 1288
NspI RCATGY 3 cut(s) 748, 963, 1386
NspV TTCGAA 1 cut(s) 195
PaeI GCATGC 2 cut(s) 748, 1386
PagI TCATGA 1 cut(s) 1957
PceI AGGCCT 2 cut(s) 2110, 2173
PctI GAATGC 2 cut(s) 1896, 3091
PdiI GCCGGC 1 cut(s) 2828
PdmI GAANNNNTTC 1 cut(s) 2865
PfeI GAWTC 9 cut(s) 41, 497, 642, 992, 1961, 2033, 2648, 2748, 3137
PflFI GACNNNGTC 2 cut(s) 1315, 2956
PflMI CCANNNNNTGG 1 cut(s) 623
PleI GAGTC 2 cut(s) 360, 2511
PmaCI CACGTG 1 cut(s) 2918
PmlI CACGTG 1 cut(s) 2918
PpsI GAGTC 2 cut(s) 360, 2511
Ppu21I YACGTR 1 cut(s) 2918
PsiI TTATAA 3 cut(s) 132, 1149, 1659
Psp6I CCWGG 4 cut(s) 596, 1275, 1313, 2335
PspCI CACGTG 1 cut(s) 2918
PspFI CCCAGC 2 cut(s) 546, 1067
PspGI CCWGG 4 cut(s) 596, 1275, 1313, 2335
PspN4I GGNNCC 3 cut(s) 159, 654, 2334
PspPI GGNCC 8 cut(s) 716, 965, 1317, 1649, 2156, 2443, 2478, 2498
PstI CTGCAG 2 cut(s) 445, 2851
PsuI RGATCY 2 cut(s) 2260, 2718
PsyI GACNNNGTC 2 cut(s) 1315, 2956
PvuII CAGCTG 2 cut(s) 1067, 1436
RsaI GTAC 4 cut(s) 159, 1539, 2088, 3005
RsaNI GTAC 4 cut(s) 158, 1538, 2087, 3004
RseI CAYNNNNRTG 2 cut(s) 525, 743
Sau96I GGNCC 8 cut(s) 716, 965, 1317, 1649, 2156, 2443, 2478, 2498
SchI GAGTC 2 cut(s) 361, 2511
ScrFI CCNGG 8 cut(s) 162, 598, 1277, 1315, 2337, 2405, 2446, 2447
SduI GDGCHC 2 cut(s) 584, 2070
SexAI ACCWGGT 1 cut(s) 1313
SfaNI GCATC 4 cut(s) 1737, 2287, 2445, 2483
SfcI CTRYAG 4 cut(s) 441, 1670, 2689, 2847
SfuI TTCGAA 1 cut(s) 195
SinI GGWCC 4 cut(s) 1317, 1649, 2156, 2498
SmaI CCCGGG 1 cut(s) 2447
SmiI ATTTAAAT 1 cut(s) 826
SmiMI CAYNNNNRTG 2 cut(s) 525, 743
SmlI CTYRAG 1 cut(s) 3170
SmoI CTYRAG 1 cut(s) 3170
SphI GCATGC 2 cut(s) 748, 1386
SseBI AGGCCT 2 cut(s) 2110, 2173
SspI AATATT 2 cut(s) 1300, 1918
StuI AGGCCT 2 cut(s) 2110, 2173
StyD4I CCNGG 8 cut(s) 160, 596, 1275, 1313, 2335, 2403, 2444, 2445
StyI CCWWGG 3 cut(s) 719, 1350, 2761
SwaI ATTTAAAT 1 cut(s) 826
TaaI ACNGT 9 cut(s) 52, 153, 637, 1254, 2217, 2389, 2690, 2794, 2941
TaiI ACGT 2 cut(s) 1865, 2920
TaqI TCGA 5 cut(s) 195, 691, 1872, 2548, 2891
TatI WGTACW 2 cut(s) 1537, 2086
TauI GCSGC 2 cut(s) 2433, 2676
TfiI GAWTC 9 cut(s) 41, 497, 642, 992, 1961, 2033, 2648, 2748, 3137
TscAI CASTG 3 cut(s) 1259, 2693, 2807
TseFI GTSAC 6 cut(s) 527, 611, 912, 944, 1119, 1229
Tsp45I GTSAC 6 cut(s) 527, 611, 912, 944, 1119, 1229
TspMI CCCGGG 1 cut(s) 2445
TspRI CASTG 3 cut(s) 1259, 2693, 2807
Tth111I GACNNNGTC 2 cut(s) 1315, 2956
Van91I CCANNNNNTGG 1 cut(s) 623
VneI GTGCAC 1 cut(s) 2066
VpaK11BI GGWCC 4 cut(s) 1317, 1649, 2156, 2498
XagI CCTNNNNNAGG 1 cut(s) 2765
XapI RAATTY 3 cut(s) 379, 937, 2861
XceI RCATGY 3 cut(s) 748, 963, 1386
XmaI CCCGGG 1 cut(s) 2445
XmiI GTMKAC 2 cut(s) 1666, 2312
XmnI GAANNNNTTC 1 cut(s) 2865
Zsp2I ATGCAT 1 cut(s) 1288
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.