PAN-like domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 426 |
| AcsI | RAATTY | 1 cut(s) | 12 |
| AfaI | GTAC | 1 cut(s) | 110 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 120 |
| AgsI | TTSAA | 2 cut(s) | 44, 476 |
| AluBI | AGCT | 4 cut(s) | 153, 201, 223, 236 |
| AluI | AGCT | 4 cut(s) | 153, 201, 223, 236 |
| Alw26I | GTCTC | 2 cut(s) | 105, 407 |
| AoxI | GGCC | 1 cut(s) | 374 |
| ApeKI | GCWGC | 3 cut(s) | 365, 427, 436 |
| ApoI | RAATTY | 1 cut(s) | 12 |
| AspLEI | GCGC | 1 cut(s) | 427 |
| AsuHPI | GGTGA | 2 cut(s) | 439, 505 |
| BbvI | GCAGC | 3 cut(s) | 352, 439, 448 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 319, 353 |
| BciVI | GTATCC | 1 cut(s) | 239 |
| BcoDI | GTCTC | 2 cut(s) | 105, 407 |
| BfaI | CTAG | 2 cut(s) | 224, 233 |
| BfmI | CTRYAG | 2 cut(s) | 148, 366 |
| BfuI | GTATCC | 1 cut(s) | 239 |
| BisI | GCNGC | 3 cut(s) | 366, 428, 437 |
| BlsI | GCNGC | 3 cut(s) | 367, 429, 438 |
| BmsI | GCATC | 3 cut(s) | 45, 317, 320 |
| BpmI | CTGGAG | 1 cut(s) | 87 |
| Bpu10I | CCTNAGC | 2 cut(s) | 404, 432 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 120 |
| Bse118I | RCCGGY | 1 cut(s) | 182 |
| Bse1I | ACTGG | 1 cut(s) | 33 |
| Bse3DI | GCAATG | 1 cut(s) | 381 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 120 |
| BseMI | GCAATG | 1 cut(s) | 381 |
| BseMII | CTCAG | 1 cut(s) | 83 |
| BseNI | ACTGG | 1 cut(s) | 33 |
| BseXI | GCAGC | 3 cut(s) | 352, 439, 448 |
| BshFI | GGCC | 1 cut(s) | 376 |
| BsiSI | CCGG | 1 cut(s) | 183 |
| BslFI | GGGAC | 1 cut(s) | 61 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 120 |
| BsmAI | GTCTC | 2 cut(s) | 105, 407 |
| BsmFI | GGGAC | 1 cut(s) | 61 |
| BsnI | GGCC | 1 cut(s) | 376 |
| Bsp143I | GATC | 1 cut(s) | 418 |
| BspANI | GGCC | 1 cut(s) | 376 |
| BspCNI | CTCAG | 1 cut(s) | 82 |
| BspMAI | CTGCAG | 1 cut(s) | 370 |
| BsrDI | GCAATG | 1 cut(s) | 381 |
| BsrFI | RCCGGY | 1 cut(s) | 182 |
| BsrI | ACTGG | 1 cut(s) | 33 |
| BssAI | RCCGGY | 1 cut(s) | 182 |
| BssMI | GATC | 1 cut(s) | 418 |
| BstC8I | GCNNGC | 4 cut(s) | 34, 184, 332, 353 |
| BstDEI | CTNAG | 3 cut(s) | 69, 404, 432 |
| BstHHI | GCGC | 1 cut(s) | 427 |
| BstKTI | GATC | 1 cut(s) | 421 |
| BstMAI | GTCTC | 2 cut(s) | 105, 407 |
| BstMBI | GATC | 1 cut(s) | 418 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 340, 433, 436 |
| BstNSI | RCATGY | 1 cut(s) | 334 |
| BstSFI | CTRYAG | 2 cut(s) | 148, 366 |
| BstV1I | GCAGC | 3 cut(s) | 352, 439, 448 |
| BsuI | GTATCC | 1 cut(s) | 239 |
| BsuRI | GGCC | 1 cut(s) | 376 |
| Cac8I | GCNNGC | 4 cut(s) | 34, 184, 332, 353 |
| CfoI | GCGC | 1 cut(s) | 427 |
| Cfr10I | RCCGGY | 1 cut(s) | 182 |
| CseI | GACGC | 1 cut(s) | 58 |
| Csp6I | GTAC | 1 cut(s) | 109 |
| CviAII | CATG | 5 cut(s) | 115, 243, 331, 400, 491 |
| CviJI | RGCY | 9 cut(s) | 93, 153, 201, 223, 236, 343, 376, 430, 439 |
| CviKI_1 | RGCY | 9 cut(s) | 93, 153, 201, 223, 236, 343, 376, 430, 439 |
| CviQI | GTAC | 1 cut(s) | 109 |
| DdeI | CTNAG | 3 cut(s) | 69, 404, 432 |
| DpnI | GATC | 1 cut(s) | 420 |
| DpnII | GATC | 1 cut(s) | 418 |
| EcoT22I | ATGCAT | 3 cut(s) | 244, 332, 336 |
| FaeI | CATG | 5 cut(s) | 118, 246, 334, 403, 494 |
| FaqI | GGGAC | 1 cut(s) | 61 |
| FatI | CATG | 5 cut(s) | 114, 242, 330, 399, 490 |
| Fnu4HI | GCNGC | 3 cut(s) | 366, 428, 437 |
| Fsp4HI | GCNGC | 3 cut(s) | 366, 428, 437 |
| FspBI | CTAG | 2 cut(s) | 224, 233 |
| FspI | TGCGCA | 1 cut(s) | 426 |
| GlaI | GCGC | 1 cut(s) | 426 |
| GluI | GCNGC | 3 cut(s) | 366, 428, 437 |
| GsuI | CTGGAG | 1 cut(s) | 87 |
| HaeIII | GGCC | 1 cut(s) | 376 |
| HapII | CCGG | 1 cut(s) | 183 |
| HgaI | GACGC | 1 cut(s) | 58 |
| HhaI | GCGC | 1 cut(s) | 427 |
| Hin1II | CATG | 5 cut(s) | 118, 246, 334, 403, 494 |
| Hin6I | GCGC | 1 cut(s) | 425 |
| HinP1I | GCGC | 1 cut(s) | 425 |
| HinfI | GANTC | 1 cut(s) | 299 |
| HpaII | CCGG | 1 cut(s) | 183 |
| HphI | GGTGA | 2 cut(s) | 439, 505 |
| Hpy188I | TCNGA | 6 cut(s) | 19, 72, 133, 142, 316, 469 |
| Hpy188III | TCNNGA | 2 cut(s) | 104, 527 |
| HpyAV | CCTTC | 4 cut(s) | 67, 254, 460, 524 |
| HpyCH4V | TGCA | 7 cut(s) | 242, 330, 334, 355, 368, 386, 503 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 340, 433, 436 |
| HpyF3I | CTNAG | 3 cut(s) | 69, 404, 432 |
| Hsp92II | CATG | 5 cut(s) | 118, 246, 334, 403, 494 |
| HspAI | GCGC | 1 cut(s) | 425 |
| KroI | GCCGGC | 1 cut(s) | 182 |
| KroNI | GCCGGC | 1 cut(s) | 184 |
| Kzo9I | GATC | 1 cut(s) | 418 |
| LmnI | GCTCC | 1 cut(s) | 206 |
| LpnPI | CCDG | 4 cut(s) | 14, 117, 196, 211 |
| Lsp1109I | GCAGC | 3 cut(s) | 352, 439, 448 |
| LweI | GCATC | 3 cut(s) | 45, 317, 320 |
| MaeI | CTAG | 2 cut(s) | 224, 233 |
| MaeIII | GTNAC | 1 cut(s) | 511 |
| MalI | GATC | 1 cut(s) | 420 |
| MboI | GATC | 1 cut(s) | 418 |
| MboII | GAAGA | 1 cut(s) | 296 |
| MluCI | AATT | 2 cut(s) | 12, 55 |
| MnlI | CCTC | 1 cut(s) | 113 |
| Mph1103I | ATGCAT | 3 cut(s) | 244, 332, 336 |
| MroNI | GCCGGC | 1 cut(s) | 182 |
| MslI | CAYNNNNRTG | 1 cut(s) | 489 |
| MspI | CCGG | 1 cut(s) | 183 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 340, 433, 436 |
| NaeI | GCCGGC | 1 cut(s) | 184 |
| NdeII | GATC | 1 cut(s) | 418 |
| NgoMIV | GCCGGC | 1 cut(s) | 182 |
| NlaIII | CATG | 5 cut(s) | 118, 246, 334, 403, 494 |
| NmuCI | GTSAC | 1 cut(s) | 511 |
| NsbI | TGCGCA | 1 cut(s) | 426 |
| NsiI | ATGCAT | 3 cut(s) | 244, 332, 336 |
| NspI | RCATGY | 1 cut(s) | 334 |
| PaeI | GCATGC | 1 cut(s) | 334 |
| PdiI | GCCGGC | 1 cut(s) | 184 |
| PfeI | GAWTC | 1 cut(s) | 299 |
| PkrI | GCNGC | 3 cut(s) | 367, 429, 438 |
| PstI | CTGCAG | 1 cut(s) | 370 |
| RsaI | GTAC | 1 cut(s) | 110 |
| RsaNI | GTAC | 1 cut(s) | 109 |
| RseI | CAYNNNNRTG | 1 cut(s) | 489 |
| SatI | GCNGC | 3 cut(s) | 366, 428, 437 |
| Sau3AI | GATC | 1 cut(s) | 418 |
| SetI | ASST | 7 cut(s) | 78, 155, 203, 225, 229, 238, 452 |
| SfaNI | GCATC | 3 cut(s) | 45, 317, 320 |
| SfcI | CTRYAG | 2 cut(s) | 148, 366 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 489 |
| SphI | GCATGC | 1 cut(s) | 334 |
| Sse9I | AATT | 2 cut(s) | 12, 55 |
| SspMI | CTAG | 2 cut(s) | 224, 233 |
| TaqI | TCGA | 1 cut(s) | 528 |
| TasI | AATT | 2 cut(s) | 12, 55 |
| TfiI | GAWTC | 1 cut(s) | 299 |
| TseFI | GTSAC | 1 cut(s) | 511 |
| TseI | GCWGC | 3 cut(s) | 365, 427, 436 |
| Tsp45I | GTSAC | 1 cut(s) | 511 |
| TspDTI | ATGAA | 5 cut(s) | 17, 273, 291, 388, 522 |
| XapI | RAATTY | 1 cut(s) | 12 |
| XceI | RCATGY | 1 cut(s) | 334 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 388 |
| XspI | CTAG | 2 cut(s) | 224, 233 |
| Zsp2I | ATGCAT | 3 cut(s) | 244, 332, 336 |