Rroxscaffold_5G00339060

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Reverse (-)
7369902 .. 7375642
5741 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00339060.1

Sequence Viewer

Length: 1836 bp
ATGATCCAAAGTACATCTCTCGCATTGGGTGAAACAATATTCAAGGGACTGCAAAGCGGAGATAAGGATGAGGTCTGGCTAATGCAGTATGGCGCTGAAGTATATAACATAACTCCTTCACACCCGTTATCCGAGGGAGAAACTCTAGTCTCTTCTGGCCTAATATTCGAATTGGGATTCTTCAGTCCTAATAGTTCTGCCAATAAGTACGTGGGCTTGTGGCACAAAAGTATATATCCCCGTAAATATGTATGGGTGGCAAACAGAGATAATCCTCTTCCAGCTACAGACACCTTGGCTACTTTGAGAATTGGCAGCAGCGGGAGTCTGGAGCTCGTAGATGGGAAACAAATTTCTGTCTGGTCGGCCAATATATCTAATTGTTCATCTGCAGTTCTCTTAGATAATGGAAACTTCGTTGCCAAAGGTGTTACGGGAGCTGATTTGTGGGAGAGTTTTAATAATCCTAGTGACTCACTACTGCCAAGAATGTTGTTGGGATATGAGAGAGGTTCTGGAGAACAAAATTTCTTGATATCTTGGAAAAGTGAAAATGATCCATCCCCGGGGATATTCTGGGCGGGACTGTCAGCAGAGTCGCCACCGCAAAAGTTCATTTGGATTAACGGATCTACTCCCCACTGGAGAAGTGGGCCATGGGATAAATCAAAGTTTATTGGTATACCCTCACCAGTAAATCAGTATGTAAATCCATTTACTGTCGTTGTTAAAGTGACACAGGAAGCAAGAACTGGCATCTTCAGTGGAAGTCATGGAACAACCCATGCGATTATTATGGCGCCTGTGGACCTTTTGGGGTTTGCAAAGCTTCTGAATCGATCTCCAATCTGCAAGTGTGTGAAAGGGTTTATACCCAAGTCAAATGAGGAATGGAGCAAAGGAAACTGGACAGGAGGTTGTGTGAGACGAACAAATTTGTCTTGTGAGACACACAGAAATGAATCAGTCTCATCAAAAGGAAAAGATGGGTTTTTGAAGTTGGAAAGATTGAAAGTACCCGATTTTCATGAATATCTGAGTTCTTTGGCTGTAGAAAAGTCTGAGGACTGCAAGATACAGTGCCTGAGTAATTGCTCTTGCCTGGCTTATGCCAATGTTGATACCATAGGGTGTTTGATGTGGTCCAAAGACCTTATTGATATGCAGCAGTTTACATCTTTTGGAGAAGATCTTTATGTCCGCCTACCACACTCAGAACTAGTTGAAGGAAAGACAATGAAGTTAATTGCCAGCCTTACGACTGTTGGATTTATGAGTATCTTGGCTGCCATAGTCTTCAGTTTGCACAGGCGCATCACAAACAAACTCGGTCAAGGAGGCTTTGGCCCAGTTTATAAGGGGATGCTACCAGAAGGGAAGGAAATAGCAGTAAAAAGACTATCTAGTAGCTCAAGACAAGGTGTCGAAGAGTTCAAGAATGAGATGATGTTGATCTCCAATCTTCAGCACAAAAACCTTGTTAGGATGATGGGCTGCTGTGTTAAAGATGATGAGAAGTTACTAATTTATGAGTTCATGCCTAACAAAAGCCTAGATACTTTTCTATCGGATCTGGCGAAGAGAGCAGTGCTTGATTGGGCTACACGCTTTAATATTATTCAGGGTGTTGCTAGATGGCTTCTTTATCTCCATCATGATTCCTATGTGAAGTGGCTATATATCTCCGAGTATGCCATGGGTGGAATATTTTCCGAAAAATCTGATATCTACAGCTTTGGGGTCCTAGTATTGGAGGCATGGAAGTTGTGGAATGAAGGCAGGGCATTGGAGTTAGTAGATGAAGTATTGGGTGATTCATATTCCTCATCGAAGTAA

Protein Analysis

611

Amino Acids

68.07

Weight (kDa)

6.65

Isoelectric Point (pI)

36.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 83 - 182 1.1e-23 D-mannose binding lectin
PAN_2 PF08276 325 - 388 3.7e-18 PAN-like domain
PK_Tyr_Ser-Thr PF07714 439 - 556 6.4e-20 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 440 - 553 6.1e-16 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1356
AccB1I GGYRCC 1 cut(s) 799
AccI GTMKAC 1 cut(s) 682
AciI CCGC 5 cut(s) 57, 321, 581, 605, 1201
AclWI GGATC 3 cut(s) 551, 637, 1578
AcoI YGGCCR 1 cut(s) 366
AcsI RAATTY 3 cut(s) 351, 526, 934
AcuI CTGAAG 5 cut(s) 117, 166, 745, 1282, 1448
AcyI GRCGYC 1 cut(s) 800
AfaI GTAC 3 cut(s) 13, 209, 1017
AfiI CCNNNNNNNGG 2 cut(s) 566, 1750
AgsI TTSAA 5 cut(s) 43, 997, 1012, 1226, 1435
AhdI GACNNNNNGTC 1 cut(s) 1421
AhlI ACTAGT 1 cut(s) 1219
AjnI CCWGG 1 cut(s) 1101
AluBI AGCT 6 cut(s) 284, 334, 440, 829, 1410, 1734
AluI AGCT 6 cut(s) 284, 334, 440, 829, 1410, 1734
Alw21I GWGCWC 1 cut(s) 336
Alw26I GTCTC 4 cut(s) 154, 919, 941, 973
AlwI GGATC 3 cut(s) 551, 637, 1578
AlwNI CAGNNNCTG 1 cut(s) 1084
Ama87I CYCGRG 1 cut(s) 565
AoxI GGCC 4 cut(s) 157, 366, 653, 1345
ApeKI GCWGC 5 cut(s) 315, 318, 1165, 1286, 1494
ApoI RAATTY 3 cut(s) 351, 526, 934
Asp700I GAANNNNTTC 1 cut(s) 1708
AspLEI GCGC 3 cut(s) 95, 802, 1314
AspS9I GGNCC 5 cut(s) 653, 808, 1143, 1346, 1741
AsuC2I CCSGG 2 cut(s) 566, 567
AsuHPI GGTGA 3 cut(s) 41, 681, 1823
AsuII TTCGAA 1 cut(s) 168
AvaI CYCGRG 1 cut(s) 565
AvaII GGWCC 3 cut(s) 808, 1143, 1741
BanI GGYRCC 1 cut(s) 799
BanII GRGCYC 1 cut(s) 336
BbsI GAAGAC 1 cut(s) 1288
Bbv12I GWGCWC 1 cut(s) 336
BbvI GCAGC 5 cut(s) 327, 330, 1177, 1273, 1481
BccI CCATC 6 cut(s) 335, 568, 980, 1483, 1629, 1659
BciT130I CCWGG 1 cut(s) 1103
BcnI CCSGG 2 cut(s) 566, 567
BcoDI GTCTC 4 cut(s) 154, 919, 941, 973
BcuI ACTAGT 1 cut(s) 1219
BfaI CTAG 7 cut(s) 146, 468, 1220, 1404, 1553, 1632, 1745
BfmI CTRYAG 4 cut(s) 285, 390, 1050, 1729
BfoI RGCGCY 2 cut(s) 96, 803
BglII AGATCT 1 cut(s) 1189
BisI GCNGC 5 cut(s) 316, 319, 1166, 1287, 1495
BlsI GCNGC 5 cut(s) 317, 320, 1167, 1288, 1496
Bme1390I CCNGG 3 cut(s) 566, 567, 1103
Bme18I GGWCC 3 cut(s) 808, 1143, 1741
BmeRI GACNNNNNGTC 1 cut(s) 1421
BmeT110I CYCGRG 1 cut(s) 565
BmgT120I GGNCC 5 cut(s) 653, 808, 1143, 1346, 1741
BmiI GGNNCC 2 cut(s) 801, 1742
BmrFI CCNGG 3 cut(s) 566, 567, 1103
BmrI ACTGGG 1 cut(s) 1343
BmsI GCATC 3 cut(s) 765, 1323, 1353
BmuI ACTGGG 1 cut(s) 1343
BpiI GAAGAC 1 cut(s) 1288
BpmI CTGGAG 3 cut(s) 350, 537, 664
Bpu14I TTCGAA 1 cut(s) 168
BpuEI CTTGAG 1 cut(s) 1396
BpuMI CCSGG 2 cut(s) 566, 567
Bsa29I ATCGAT 1 cut(s) 838
BsaAI YACGTR 1 cut(s) 211
BsaBI GATNNNNATC 1 cut(s) 1451
BsaHI GRCGYC 1 cut(s) 800
BsaJI CCNNGG 7 cut(s) 132, 294, 564, 565, 566, 656, 1695
BsaXI ACNNNNNCTCC 2 cut(s) 906, 936
Bsc4I CCNNNNNNNGG 2 cut(s) 566, 1750
Bse1I ACTGG 5 cut(s) 647, 692, 757, 911, 1349
Bse8I GATNNNNATC 1 cut(s) 1451
BseBI CCWGG 1 cut(s) 1103
BseCI ATCGAT 1 cut(s) 838
BseDI CCNNGG 7 cut(s) 132, 294, 564, 565, 566, 656, 1695
BseGI GGATG 4 cut(s) 73, 560, 1368, 1491
BseJI GATNNNNATC 1 cut(s) 1451
BseLI CCNNNNNNNGG 2 cut(s) 566, 1750
BseMII CTCAG 4 cut(s) 1028, 1053, 1076, 1227
BseNI ACTGG 5 cut(s) 647, 692, 757, 911, 1349
BseXI GCAGC 5 cut(s) 327, 330, 1177, 1273, 1481
BshFI GGCC 4 cut(s) 159, 368, 655, 1347
BshNI GGYRCC 1 cut(s) 799
BshVI ATCGAT 1 cut(s) 838
BsiHKAI GWGCWC 1 cut(s) 336
BsiHKCI CYCGRG 1 cut(s) 565
BsiSI CCGG 1 cut(s) 566
BslFI GGGAC 2 cut(s) 60, 597
BslI CCNNNNNNNGG 2 cut(s) 566, 1750
BsmAI GTCTC 4 cut(s) 154, 919, 941, 973
BsmBI CGTCTC 1 cut(s) 919
BsmFI GGGAC 2 cut(s) 60, 597
BsnI GGCC 4 cut(s) 159, 368, 655, 1347
BsoBI CYCGRG 1 cut(s) 565
Bsp119I TTCGAA 1 cut(s) 168
Bsp1286I GDGCHC 1 cut(s) 336
Bsp143I GATC 7 cut(s) 3, 556, 629, 839, 1189, 1452, 1570
Bsp19I CCATGG 2 cut(s) 656, 1695
BspACI CCGC 5 cut(s) 57, 321, 581, 605, 1201
BspANI GGCC 4 cut(s) 159, 368, 655, 1347
BspCNI CTCAG 4 cut(s) 1029, 1054, 1077, 1226
BspDI ATCGAT 1 cut(s) 838
BspHI TCATGA 2 cut(s) 1027, 1654
BspLI GGNNCC 2 cut(s) 801, 1742
BspMAI CTGCAG 1 cut(s) 394
BspPI GGATC 3 cut(s) 551, 637, 1578
BspT104I TTCGAA 1 cut(s) 168
BspT107I GGYRCC 1 cut(s) 799
BsrI ACTGG 5 cut(s) 647, 692, 757, 911, 1349
BssECI CCNNGG 7 cut(s) 132, 294, 564, 565, 566, 656, 1695
BssMI GATC 7 cut(s) 3, 556, 629, 839, 1189, 1452, 1570
BssNAI GTATAC 1 cut(s) 683
BssNI GRCGYC 1 cut(s) 800
BssT1I CCWWGG 3 cut(s) 294, 656, 1695
Bst1107I GTATAC 1 cut(s) 683
Bst2UI CCWGG 1 cut(s) 1103
Bst4CI ACNGT 4 cut(s) 588, 721, 1080, 1264
Bst6I CTCTTC 4 cut(s) 157, 282, 1422, 1574
BstACI GRCGYC 1 cut(s) 800
BstBAI YACGTR 1 cut(s) 211
BstBI TTCGAA 1 cut(s) 168
BstC8I GCNNGC 1 cut(s) 1252
BstDEI CTNAG 5 cut(s) 400, 1037, 1062, 1085, 1213
BstDSI CCRYGG 2 cut(s) 656, 1695
BstF5I GGATG 4 cut(s) 73, 560, 1368, 1491
BstH2I RGCGCY 2 cut(s) 96, 803
BstHHI GCGC 3 cut(s) 95, 802, 1314
BstKTI GATC 7 cut(s) 6, 559, 632, 842, 1192, 1455, 1573
BstMAI GTCTC 4 cut(s) 154, 919, 941, 973
BstMBI GATC 7 cut(s) 3, 556, 629, 839, 1189, 1452, 1570
BstMWI GCNNNNNNNGC 1 cut(s) 1583
BstNI CCWGG 1 cut(s) 1103
BstSCI CCNGG 3 cut(s) 564, 565, 1101
BstSFI CTRYAG 4 cut(s) 285, 390, 1050, 1729
BstV1I GCAGC 5 cut(s) 327, 330, 1177, 1273, 1481
BstV2I GAAGAC 1 cut(s) 1288
BstX2I RGATCY 3 cut(s) 629, 1189, 1570
BstYI RGATCY 3 cut(s) 629, 1189, 1570
BstZ17I GTATAC 1 cut(s) 683
Bsu15I ATCGAT 1 cut(s) 838
BsuRI GGCC 4 cut(s) 159, 368, 655, 1347
BsuTUI ATCGAT 1 cut(s) 838
BtgI CCRYGG 2 cut(s) 656, 1695
BtsCI GGATG 4 cut(s) 73, 560, 1368, 1491
BtsI GCAGTG 1 cut(s) 1593
BtsIMutI CAGTG 4 cut(s) 640, 769, 1085, 1593
Cac8I GCNNGC 1 cut(s) 1252
CaiI CAGNNNCTG 1 cut(s) 1084
CciI TCATGA 2 cut(s) 1027, 1654
CfoI GCGC 3 cut(s) 95, 802, 1314
Cfr13I GGNCC 5 cut(s) 653, 808, 1143, 1346, 1741
Cfr9I CCCGGG 1 cut(s) 565
ClaI ATCGAT 1 cut(s) 838
Csp6I GTAC 3 cut(s) 12, 208, 1016
CviAII CATG 8 cut(s) 657, 773, 785, 1028, 1537, 1655, 1696, 1758
CviQI GTAC 3 cut(s) 12, 208, 1016
DdeI CTNAG 5 cut(s) 400, 1037, 1062, 1085, 1213
DinI GGCGCC 1 cut(s) 801
DpnI GATC 7 cut(s) 5, 558, 631, 841, 1191, 1454, 1572
DpnII GATC 7 cut(s) 3, 556, 629, 839, 1189, 1452, 1570
DriI GACNNNNNGTC 1 cut(s) 1421
EaeI YGGCCR 1 cut(s) 366
Eam1104I CTCTTC 4 cut(s) 157, 282, 1422, 1574
Eam1105I GACNNNNNGTC 1 cut(s) 1421
EarI CTCTTC 4 cut(s) 157, 282, 1422, 1574
EciI GGCGGA 1 cut(s) 1190
Ecl136II GAGCTC 1 cut(s) 334
Eco130I CCWWGG 3 cut(s) 294, 656, 1695
Eco24I GRGCYC 1 cut(s) 336
Eco32I GATATC 2 cut(s) 537, 1726
Eco47I GGWCC 3 cut(s) 808, 1143, 1741
Eco53kI GAGCTC 1 cut(s) 334
Eco57I CTGAAG 5 cut(s) 117, 166, 745, 1282, 1448
Eco88I CYCGRG 1 cut(s) 565
EcoICRI GAGCTC 1 cut(s) 334
EcoO109I RGGNCCY 1 cut(s) 1741
EcoRII CCWGG 1 cut(s) 1101
EcoRV GATATC 2 cut(s) 537, 1726
EcoT14I CCWWGG 3 cut(s) 294, 656, 1695
EcoT38I GRGCYC 1 cut(s) 336
EgeI GGCGCC 1 cut(s) 801
EheI GGCGCC 1 cut(s) 801
ErhI CCWWGG 3 cut(s) 294, 656, 1695
Esp3I CGTCTC 1 cut(s) 919
FaeI CATG 8 cut(s) 660, 776, 788, 1031, 1540, 1658, 1699, 1761
FaqI GGGAC 2 cut(s) 60, 597
FatI CATG 8 cut(s) 656, 772, 784, 1027, 1536, 1654, 1695, 1757
FauI CCCGC 2 cut(s) 314, 574
FblI GTMKAC 1 cut(s) 682
Fnu4HI GCNGC 5 cut(s) 316, 319, 1166, 1287, 1495
FokI GGATG 4 cut(s) 80, 547, 1375, 1498
FriOI GRGCYC 1 cut(s) 336
Fsp4HI GCNGC 5 cut(s) 316, 319, 1166, 1287, 1495
FspBI CTAG 7 cut(s) 146, 468, 1220, 1404, 1553, 1632, 1745
GlaI GCGC 3 cut(s) 94, 801, 1313
GluI GCNGC 5 cut(s) 316, 319, 1166, 1287, 1495
GsuI CTGGAG 3 cut(s) 350, 537, 664
HaeII RGCGCY 2 cut(s) 96, 803
HaeIII GGCC 4 cut(s) 159, 368, 655, 1347
HapII CCGG 1 cut(s) 566
HhaI GCGC 3 cut(s) 95, 802, 1314
Hin1I GRCGYC 1 cut(s) 800
Hin1II CATG 8 cut(s) 660, 776, 788, 1031, 1540, 1658, 1699, 1761
Hin6I GCGC 3 cut(s) 93, 800, 1312
HinP1I GCGC 3 cut(s) 93, 800, 1312
HindIII AAGCTT 1 cut(s) 827
HinfI GANTC 8 cut(s) 177, 325, 473, 596, 835, 962, 1658, 1814
HpaII CCGG 1 cut(s) 566
HphI GGTGA 3 cut(s) 41, 681, 1823
Hpy166II GTNNAC 3 cut(s) 683, 808, 1173
Hpy188I TCNGA 9 cut(s) 133, 834, 1038, 1063, 1216, 1570, 1687, 1714, 1723
Hpy188III TCNNGA 7 cut(s) 329, 516, 532, 1028, 1413, 1435, 1655
Hpy8I GTNNAC 3 cut(s) 683, 808, 1173
HpyAV CCTTC 5 cut(s) 126, 1220, 1367, 1372, 1769
HpyCH4III ACNGT 4 cut(s) 588, 721, 1080, 1264
HpyCH4IV ACGT 1 cut(s) 210
HpyCH4V TGCA 8 cut(s) 52, 85, 392, 824, 852, 1071, 1165, 1306
HpyF10VI GCNNNNNNNGC 1 cut(s) 1583
HpyF3I CTNAG 5 cut(s) 400, 1037, 1062, 1085, 1213
HpySE526I ACGT 1 cut(s) 210
Hsp92I GRCGYC 1 cut(s) 800
Hsp92II CATG 8 cut(s) 660, 776, 788, 1031, 1540, 1658, 1699, 1761
HspAI GCGC 3 cut(s) 93, 800, 1312
KasI GGCGCC 1 cut(s) 799
Kzo9I GATC 7 cut(s) 3, 556, 629, 839, 1189, 1452, 1570
LmnI GCTCC 3 cut(s) 331, 437, 894
Lsp1109I GCAGC 5 cut(s) 327, 330, 1177, 1273, 1481
LweI GCATC 3 cut(s) 765, 1323, 1353
MaeI CTAG 7 cut(s) 146, 468, 1220, 1404, 1553, 1632, 1745
MaeII ACGT 1 cut(s) 210
MaeIII GTNAC 4 cut(s) 430, 470, 733, 1518
MalI GATC 7 cut(s) 5, 558, 631, 841, 1191, 1454, 1572
MboI GATC 7 cut(s) 3, 556, 629, 839, 1189, 1452, 1570
MboII GAAGA 9 cut(s) 144, 172, 269, 751, 1199, 1288, 1439, 1454, 1591
MflI RGATCY 3 cut(s) 629, 1189, 1570
MhlI GDGCHC 1 cut(s) 336
MluCI AATT 9 cut(s) 170, 309, 351, 379, 526, 934, 1090, 1245, 1524
Mly113I GGCGCC 1 cut(s) 800
MlyI GAGTC 3 cut(s) 334, 467, 605
MmeI TCCRAC 2 cut(s) 981, 1246
MroXI GAANNNNTTC 1 cut(s) 1708
MseI TTAA 6 cut(s) 459, 624, 729, 1244, 1503, 1611
MslI CAYNNNNRTG 1 cut(s) 957
MspA1I CMGCKG 1 cut(s) 321
MspI CCGG 1 cut(s) 566
MspR9I CCNGG 3 cut(s) 566, 567, 1103
MvaI CCWGG 1 cut(s) 1103
MwoI GCNNNNNNNGC 1 cut(s) 1583
NarI GGCGCC 1 cut(s) 800
NciI CCSGG 2 cut(s) 566, 567
NcoI CCATGG 2 cut(s) 656, 1695
NdeII GATC 7 cut(s) 3, 556, 629, 839, 1189, 1452, 1570
NlaIII CATG 8 cut(s) 660, 776, 788, 1031, 1540, 1658, 1699, 1761
NlaIV GGNNCC 2 cut(s) 801, 1742
NmuCI GTSAC 2 cut(s) 470, 733
NspV TTCGAA 1 cut(s) 168
PagI TCATGA 2 cut(s) 1027, 1654
PcsI WCGNNNNNNNCGW 1 cut(s) 1574
PdmI GAANNNNTTC 1 cut(s) 1708
PfeI GAWTC 5 cut(s) 177, 835, 962, 1658, 1814
PkrI GCNGC 5 cut(s) 317, 320, 1167, 1288, 1496
PleI GAGTC 3 cut(s) 333, 467, 604
PluTI GGCGCC 1 cut(s) 803
PpsI GAGTC 3 cut(s) 333, 467, 604
Ppu21I YACGTR 1 cut(s) 211
PpuMI RGGWCCY 1 cut(s) 1741
PsiI TTATAA 1 cut(s) 1356
Psp124BI GAGCTC 1 cut(s) 336
Psp5II RGGWCCY 1 cut(s) 1741
Psp6I CCWGG 1 cut(s) 1101
PspGI CCWGG 1 cut(s) 1101
PspN4I GGNNCC 2 cut(s) 801, 1742
PspPI GGNCC 5 cut(s) 653, 808, 1143, 1346, 1741
PspPPI RGGWCCY 1 cut(s) 1741
PstI CTGCAG 1 cut(s) 394
PstNI CAGNNNCTG 1 cut(s) 1084
PsuI RGATCY 3 cut(s) 629, 1189, 1570
RsaI GTAC 3 cut(s) 13, 209, 1017
RsaNI GTAC 3 cut(s) 12, 208, 1016
RseI CAYNNNNRTG 1 cut(s) 957
SacI GAGCTC 1 cut(s) 336
SaqAI TTAA 6 cut(s) 459, 624, 729, 1244, 1503, 1611
SatI GCNGC 5 cut(s) 316, 319, 1166, 1287, 1495
Sau3AI GATC 7 cut(s) 3, 556, 629, 839, 1189, 1452, 1570
Sau96I GGNCC 5 cut(s) 653, 808, 1143, 1346, 1741
SchI GAGTC 3 cut(s) 334, 467, 605
ScrFI CCNGG 3 cut(s) 566, 567, 1103
SduI GDGCHC 1 cut(s) 336
SfaNI GCATC 3 cut(s) 765, 1323, 1353
SfcI CTRYAG 4 cut(s) 285, 390, 1050, 1729
SfoI GGCGCC 1 cut(s) 801
SfuI TTCGAA 1 cut(s) 168
SinI GGWCC 3 cut(s) 808, 1143, 1741
SmaI CCCGGG 1 cut(s) 567
SmiMI CAYNNNNRTG 1 cut(s) 957
SmlI CTYRAG 1 cut(s) 1411
SmoI CTYRAG 1 cut(s) 1411
SpeI ACTAGT 1 cut(s) 1219
Sse9I AATT 9 cut(s) 170, 309, 351, 379, 526, 934, 1090, 1245, 1524
SsiI CCGC 5 cut(s) 57, 321, 581, 605, 1201
SspDI GGCGCC 1 cut(s) 799
SspI AATATT 4 cut(s) 39, 165, 1615, 1707
SspMI CTAG 7 cut(s) 146, 468, 1220, 1404, 1553, 1632, 1745
SstI GAGCTC 1 cut(s) 336
StyD4I CCNGG 3 cut(s) 564, 565, 1101
StyI CCWWGG 3 cut(s) 294, 656, 1695
TaaI ACNGT 4 cut(s) 588, 721, 1080, 1264
TaiI ACGT 1 cut(s) 213
TaqI TCGA 4 cut(s) 168, 838, 1425, 1829
TaqII GACCGA 1 cut(s) 1319
TasI AATT 9 cut(s) 170, 309, 351, 379, 526, 934, 1090, 1245, 1524
TatI WGTACW 1 cut(s) 11
TfiI GAWTC 5 cut(s) 177, 835, 962, 1658, 1814
Tru1I TTAA 6 cut(s) 459, 624, 729, 1244, 1503, 1611
Tru9I TTAA 6 cut(s) 459, 624, 729, 1244, 1503, 1611
TscAI CASTG 4 cut(s) 647, 769, 1085, 1593
TseFI GTSAC 2 cut(s) 470, 733
TseI GCWGC 5 cut(s) 315, 318, 1165, 1286, 1494
Tsp45I GTSAC 2 cut(s) 470, 733
TspGWI ACGGA 1 cut(s) 642
TspMI CCCGGG 1 cut(s) 565
TspRI CASTG 4 cut(s) 647, 769, 1085, 1593
VpaK11BI GGWCC 3 cut(s) 808, 1143, 1741
XapI RAATTY 3 cut(s) 351, 526, 934
XcmI CCANNNNNNNNNTGG 2 cut(s) 208, 647
XmaI CCCGGG 1 cut(s) 565
XmiI GTMKAC 1 cut(s) 682
XmnI GAANNNNTTC 1 cut(s) 1708
XspI CTAG 7 cut(s) 146, 468, 1220, 1404, 1553, 1632, 1745
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.