Rroxscaffold_5G00360790

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Reverse (-)
41408303 .. 41412090
3788 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00360790.1

Sequence Viewer

Length: 2409 bp
ATGGGTATTAGAACCAGAAGCTTTTTTGCTTTAAATGGCTCCATGTTCTTCTTCCTTTTGATTTTCATTTTCAGCTTCCTTCCATCACATTATCACTGTGCTGAAGTTGATGGAATAACTCATTCCCAACCGTTAGCGCAGGGACAAACTCTAGTTTCCCCTGGCCACATTTTTGAGTTAGGCTTCTTCAGTCCTAATAATTCTGCTAACAAGTATGTGGGGATATGGCACAAGGATATATCTCCGCGAAAAGTTGTATGGGTGGCCAACAGAGAAAATTCTCTTGCAGCTACAGACAACTTGGGGAGCTTGACTGTTAGCAGCAATGGGAATCTGAAGCTTGTTGATGGGAAACAGAAGTCTATTTGGTCTACCAATGTTACTTCTTTGGTGTCATCATTGAATACAAGTTCAGTTGCTGCAGTTCTTTTAGACAATGGAAACTTTGTTCTCAATGATCATATGGGAGCTGAGTTATGGCAGAGCTTTGATCACCCTAGTGACACAGTCCTGCCAAACATGGTGTTGCGTTACGATAAGTCTGGAAAGGGGAACTTCTTGAGTTCTTGGAAAGCAGAGAATGATCCATCACCAGGGAGATTCTTGCTTGGATTGGCGCCACAGACACCGTCACAAGTGTTCATTTGGATCAATAATGGATCAAATAATTCACATTCAGTTCCTTACTGGAGAAGTGGACCATGGGATAAGTCGAGCTTCATTGGAGTACCAGAAATGGATCGTCGATATATAAATGGATTTAGTGTAGATGATAACTTAAAGCAGGGCACACGAGATTTTTCTTATAGTTTATACGACAAACCTGTGGCATACATATACATATCTCCAGAAGGAATAGTGAGGCTTAGATTTTCGAAGAATGATGGGAAGTGGTATGTTTATTGGCAGACACCTAAGAATCCATGTGACATTTATGGAGCTTGTGGACCTTTTGGAATTTGTAAAGCTTCTGTATCTCCAATCTGTAAGTGTTTGAAAGGTTTTGTACCAAAGTCAACAGCGGAATGGAGCAAAGGAAACTGGACAGGAGGGTGTGTGCGGCAGACCAAATTGTTTTGTGAGAGACAAAGAAATAAGTCAGTCTCATCAAGAGGAAAACAAGTTGATGATGATGGGTTTTGGAAGATGGTGAAGTTGAAAATACCAGATTCTCACGAGTTCATTACTGCTTTCAATGCTGAAGAAACGTCCAACGATTGCAAATTACGGTGTCTAAACAACTGTTCTTGCCTTGCTTATGCATTTGTTAATAATATAGGGTGTTTGGTGTGGTCCAAAGATCTTATTGATATACAGCAGTTTTCGGCGTCTGTCGGAGTAGATCTTTATATTCGCCTAGCACGCTCCGAACTAGGTATAGGAAAGCCAATAAAGTTAATCGCCAGCCTTACAGCTATTGGTTTTGTGAGTATCTTGGCAGCGATAGTATTCGGTTTTTACAGGAGACGAGCTAGCCAGAAGAGACAGATCAAACTAACAACACAGAACTTTGAATCTACTGGTATGATTAAGAGTTCAAGAGATGGTCTCCGAGAATATATAGGAAAGCATAATCCCTCAGAGCTAAAGATATATGATTTTGATAGCATACTAATTGCTACAAACAATTTCAGTCTTGCAAACAAACTTGGGCAAGGAGGATTTGGCCCGGTTTATAAGGGTATGCTACAAGATGGGAAGGAAGTAGCAGTAAAGAGACTATCCAGTAGCTCAGGACAAGGCATTGAAGAGTTCAAGAACGAGATGCTGTTGATCTCCAATCTTCAACATAAAAATCTAGTTAGGATAATGGGGTGCTGCATTAAAGAGGATGAGAAGTTACTGATTTACGAGTTCATGCCAAACAAAAGCTTGGATACTTTTCTATTTGATACAAGGAAGAGAGCAGTGCTTGATTGGGTGACACGCTTTAATATTATTCAGGGTGTTGCTAGAGGGCTTCTTTATCTCCATCATGATTCTGGCTATATGTCTCCGGAGTATGCCATGGGGGGAATGTTTTCTGAAAAATCCGATGTCTACAGCTTTGGGGTTGTGGTCTTGGAGATTATTAGCAGCAAGAAGAATACCAGCTTCTCTTTATATGACCAACAGCTAGGCTTTCTAACCTATGGGTTGGAGTTGGTAGATGAAATATTGGGCAATTCATATTCCTCATTGGAAGTATTTAAATGCGTGCATATCGAGCTTTTGTGTGTACAAGACAATGCTGTGGATAGGCCAACCATGGCGGATATAGCTTTGATGTTAACTAGCGAGAAAGATGGTCCACAACCTAAGCTGCCTGTATTCACTATCCAAAACTCAGCTTATCATCCTCAACCACACTTTGAGAATACAAATTCCTCCAAAAATGAAGCTAGCATTACAATGATTGAAGGACGATAA

Protein Analysis

802

Amino Acids

89.78

Weight (kDa)

8.61

Isoelectric Point (pI)

38.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 85 - 191 1e-27 D-mannose binding lectin
S_locus_glycop PF00954 230 - 339 3.1e-29 S-locus glycoprotein domain
PAN_2 PF08276 376 - 438 9.2e-16 PAN-like domain
PK_Tyr_Ser-Thr PF07714 546 - 659 5.6e-21 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 546 - 660 1.4e-16 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 663 - 753 1.1e-06 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1677
AccB1I GGYRCC 1 cut(s) 616
AccI GTMKAC 2 cut(s) 371, 2040
AccII CGCG 1 cut(s) 247
AccIII TCCGGA 1 cut(s) 1996
AciI CCGC 4 cut(s) 245, 1022, 1060, 2252
AclWI GGATC 4 cut(s) 578, 656, 667, 747
AcoI YGGCCR 2 cut(s) 163, 264
AcsI RAATTY 3 cut(s) 277, 957, 2362
AcuI CTGAAG 4 cut(s) 123, 172, 356, 1221
AcyI GRCGYC 2 cut(s) 617, 1328
AfaI GTAC 3 cut(s) 729, 1008, 2220
AfiI CCNNNNNNNGG 1 cut(s) 593
AjnI CCWGG 2 cut(s) 160, 592
AleI CACNNNNGTG 1 cut(s) 498
AloI GAACNNNNNNTCC 2 cut(s) 432, 464
Alw26I GTCTC 7 cut(s) 1078, 1108, 1459, 1477, 1553, 1711, 1998
AlwI GGATC 4 cut(s) 578, 656, 667, 747
AlwNI CAGNNNCTG 1 cut(s) 419
Aor13HI TCCGGA 1 cut(s) 1996
AoxI GGCC 4 cut(s) 163, 264, 1666, 2240
ApeKI GCWGC 7 cut(s) 287, 321, 419, 1439, 1818, 2076, 2302
ApoI RAATTY 3 cut(s) 277, 957, 2362
Asp700I GAANNNNTTC 1 cut(s) 2020
AspLEI GCGC 2 cut(s) 139, 619
AspS9I GGNCC 5 cut(s) 698, 947, 1293, 1667, 2288
AsuC2I CCSGG 1 cut(s) 1670
AsuHPI GGTGA 4 cut(s) 485, 582, 1162, 1933
AsuII TTCGAA 1 cut(s) 875
AsuNHI GCTAGC 2 cut(s) 1472, 2381
AvaII GGWCC 4 cut(s) 698, 947, 1293, 2288
BaeGI GKGCMC 1 cut(s) 791
BalI TGGCCA 2 cut(s) 165, 266
BanI GGYRCC 1 cut(s) 616
BauI CACGAG 2 cut(s) 792, 1175
BbvI GCAGC 7 cut(s) 299, 333, 406, 1451, 1805, 2088, 2289
BciT130I CCWGG 2 cut(s) 162, 594
BciVI GTATCC 1 cut(s) 1870
BclI TGATCA 2 cut(s) 457, 490
BcnI CCSGG 1 cut(s) 1670
BcoDI GTCTC 7 cut(s) 1078, 1108, 1459, 1477, 1553, 1711, 1998
BfmI CTRYAG 3 cut(s) 291, 420, 2041
BfoI RGCGCY 1 cut(s) 620
BfuI GTATCC 1 cut(s) 1870
BglII AGATCT 2 cut(s) 1300, 1342
BisI GCNGC 8 cut(s) 288, 322, 420, 1061, 1440, 1819, 2077, 2303
BlsI GCNGC 8 cut(s) 289, 323, 421, 1062, 1441, 1820, 2078, 2304
Bme1390I CCNGG 3 cut(s) 162, 594, 1670
Bme18I GGWCC 4 cut(s) 698, 947, 1293, 2288
BmgT120I GGNCC 5 cut(s) 698, 947, 1293, 1667, 2288
BmiI GGNNCC 2 cut(s) 40, 618
BmrFI CCNGG 3 cut(s) 162, 594, 1670
BmsI GCATC 1 cut(s) 1755
BmtI GCTAGC 2 cut(s) 1476, 2385
BplI GAGNNNNNCTC 2 cut(s) 1533, 1565
BpmI CTGGAG 2 cut(s) 709, 831
Bpu10I CCTNAGC 2 cut(s) 1732, 2298
Bpu14I TTCGAA 1 cut(s) 875
BpuEI CTTGAG 1 cut(s) 580
BpuMI CCSGG 1 cut(s) 1670
BsaHI GRCGYC 2 cut(s) 617, 1328
BsaI GGTCTC 1 cut(s) 1553
BsaJI CCNNGG 5 cut(s) 160, 593, 701, 2007, 2247
BsaWI WCCGGW 1 cut(s) 1996
BsaXI ACNNNNNCTCC 2 cut(s) 1041, 1071
Bsc4I CCNNNNNNNGG 1 cut(s) 593
Bse1I ACTGG 4 cut(s) 692, 1046, 1525, 1725
Bse3DI GCAATG 1 cut(s) 331
BseAI TCCGGA 1 cut(s) 1996
BseBI CCWGG 2 cut(s) 162, 594
BseDI CCNNGG 5 cut(s) 160, 593, 701, 2007, 2247
BseGI GGATG 2 cut(s) 1837, 2335
BseLI CCNNNNNNNGG 1 cut(s) 593
BseMI GCAATG 1 cut(s) 331
BseMII CTCAG 4 cut(s) 462, 1593, 1746, 2340
BseNI ACTGG 4 cut(s) 692, 1046, 1525, 1725
BseSI GKGCMC 1 cut(s) 791
BseXI GCAGC 7 cut(s) 299, 333, 406, 1451, 1805, 2088, 2289
Bsh1236I CGCG 1 cut(s) 247
BshFI GGCC 4 cut(s) 165, 266, 1668, 2242
BshNI GGYRCC 1 cut(s) 616
BsiSI CCGG 2 cut(s) 1670, 1997
BslFI GGGAC 1 cut(s) 156
BslI CCNNNNNNNGG 1 cut(s) 593
BsmAI GTCTC 7 cut(s) 1078, 1108, 1459, 1477, 1553, 1711, 1998
BsmBI CGTCTC 1 cut(s) 1459
BsmFI GGGAC 1 cut(s) 156
BsnI GGCC 4 cut(s) 165, 266, 1668, 2242
Bso31I GGTCTC 1 cut(s) 1553
Bsp119I TTCGAA 1 cut(s) 875
Bsp1286I GDGCHC 1 cut(s) 791
Bsp13I TCCGGA 1 cut(s) 1996
Bsp1407I TGTACA 1 cut(s) 2218
Bsp19I CCATGG 3 cut(s) 701, 2007, 2247
BspACI CCGC 4 cut(s) 245, 1022, 1060, 2252
BspANI GGCC 4 cut(s) 165, 266, 1668, 2242
BspCNI CTCAG 4 cut(s) 463, 1592, 1745, 2339
BspEI TCCGGA 1 cut(s) 1996
BspFNI CGCG 1 cut(s) 247
BspHI TCATGA 1 cut(s) 1975
BspLI GGNNCC 2 cut(s) 40, 618
BspMAI CTGCAG 1 cut(s) 424
BspOI GCTAGC 2 cut(s) 1476, 2385
BspPI GGATC 4 cut(s) 578, 656, 667, 747
BspT104I TTCGAA 1 cut(s) 875
BspT107I GGYRCC 1 cut(s) 616
BspTNI GGTCTC 1 cut(s) 1553
BsrDI GCAATG 1 cut(s) 331
BsrGI TGTACA 1 cut(s) 2218
BsrI ACTGG 4 cut(s) 692, 1046, 1525, 1725
BssECI CCNNGG 5 cut(s) 160, 593, 701, 2007, 2247
BssNI GRCGYC 2 cut(s) 617, 1328
BssSI CACGAG 2 cut(s) 792, 1175
BssT1I CCWWGG 3 cut(s) 701, 2007, 2247
Bst2BI CACGAG 2 cut(s) 792, 1175
Bst2UI CCWGG 2 cut(s) 162, 594
Bst4CI ACNGT 7 cut(s) 98, 132, 316, 508, 630, 1230, 1244
Bst6I CTCTTC 3 cut(s) 1475, 1743, 1895
BstACI GRCGYC 2 cut(s) 617, 1328
BstAUI TGTACA 1 cut(s) 2218
BstBI TTCGAA 1 cut(s) 875
BstC8I GCNNGC 5 cut(s) 1363, 1405, 1474, 2198, 2383
BstDEI CTNAG 7 cut(s) 471, 866, 915, 1579, 1732, 2298, 2326
BstDSI CCRYGG 3 cut(s) 701, 2007, 2247
BstF5I GGATG 2 cut(s) 1837, 2335
BstFNI CGCG 1 cut(s) 247
BstH2I RGCGCY 1 cut(s) 620
BstHHI GCGC 2 cut(s) 139, 619
BstMAI GTCTC 7 cut(s) 1078, 1108, 1459, 1477, 1553, 1711, 1998
BstMWI GCNNNNNNNGC 4 cut(s) 1196, 1362, 2206, 2258
BstNI CCWGG 2 cut(s) 162, 594
BstSCI CCNGG 3 cut(s) 160, 592, 1668
BstSFI CTRYAG 3 cut(s) 291, 420, 2041
BstSLI GKGCMC 1 cut(s) 791
BstUI CGCG 1 cut(s) 247
BstV1I GCAGC 7 cut(s) 299, 333, 406, 1451, 1805, 2088, 2289
BstX2I RGATCY 2 cut(s) 1300, 1342
BstYI RGATCY 2 cut(s) 1300, 1342
BsuI GTATCC 1 cut(s) 1870
BsuRI GGCC 4 cut(s) 165, 266, 1668, 2242
BtgI CCRYGG 3 cut(s) 701, 2007, 2247
BtsCI GGATG 2 cut(s) 1837, 2335
BtsI GCAGTG 1 cut(s) 1914
BtsIMutI CAGTG 2 cut(s) 94, 1914
Cac8I GCNNGC 5 cut(s) 1363, 1405, 1474, 2198, 2383
CaiI CAGNNNCTG 1 cut(s) 419
CciI TCATGA 1 cut(s) 1975
CfoI GCGC 2 cut(s) 139, 619
Cfr13I GGNCC 5 cut(s) 698, 947, 1293, 1667, 2288
CseI GACGC 1 cut(s) 1317
Csp6I GTAC 3 cut(s) 728, 1007, 2219
CviAII CATG 8 cut(s) 43, 520, 702, 924, 1858, 1976, 2008, 2248
CviQI GTAC 3 cut(s) 728, 1007, 2219
DdeI CTNAG 7 cut(s) 471, 866, 915, 1579, 1732, 2298, 2326
DinI GGCGCC 1 cut(s) 618
DraI TTTAAA 2 cut(s) 33, 2191
EaeI YGGCCR 2 cut(s) 163, 264
Eam1104I CTCTTC 3 cut(s) 1475, 1743, 1895
EarI CTCTTC 3 cut(s) 1475, 1743, 1895
EciI GGCGGA 1 cut(s) 2267
Eco130I CCWWGG 3 cut(s) 701, 2007, 2247
Eco31I GGTCTC 1 cut(s) 1553
Eco47I GGWCC 4 cut(s) 698, 947, 1293, 2288
Eco57I CTGAAG 4 cut(s) 123, 172, 356, 1221
EcoRII CCWGG 2 cut(s) 160, 592
EcoT14I CCWWGG 3 cut(s) 701, 2007, 2247
EcoT22I ATGCAT 1 cut(s) 1264
EgeI GGCGCC 1 cut(s) 618
EheI GGCGCC 1 cut(s) 618
ErhI CCWWGG 3 cut(s) 701, 2007, 2247
Esp3I CGTCTC 1 cut(s) 1459
FaeI CATG 8 cut(s) 46, 523, 705, 927, 1861, 1979, 2011, 2251
FalI AAGNNNNNCTT 4 cut(s) 539, 571, 701, 733
FaqI GGGAC 1 cut(s) 156
FatI CATG 8 cut(s) 42, 519, 701, 923, 1857, 1975, 2007, 2247
FauNDI CATATG 1 cut(s) 462
FbaI TGATCA 2 cut(s) 457, 490
FblI GTMKAC 2 cut(s) 371, 2040
Fnu4HI GCNGC 8 cut(s) 288, 322, 420, 1061, 1440, 1819, 2077, 2303
FokI GGATG 2 cut(s) 1844, 2322
Fsp4HI GCNGC 8 cut(s) 288, 322, 420, 1061, 1440, 1819, 2077, 2303
GlaI GCGC 2 cut(s) 138, 618
GluI GCNGC 8 cut(s) 288, 322, 420, 1061, 1440, 1819, 2077, 2303
GsuI CTGGAG 2 cut(s) 709, 831
HaeII RGCGCY 1 cut(s) 620
HaeIII GGCC 4 cut(s) 165, 266, 1668, 2242
HapII CCGG 2 cut(s) 1670, 1997
HgaI GACGC 1 cut(s) 1317
HhaI GCGC 2 cut(s) 139, 619
Hin1I GRCGYC 2 cut(s) 617, 1328
Hin1II CATG 8 cut(s) 46, 523, 705, 927, 1861, 1979, 2011, 2251
Hin6I GCGC 2 cut(s) 137, 617
HinP1I GCGC 2 cut(s) 137, 617
HincII GTYRAC 2 cut(s) 1017, 2271
HindII GTYRAC 2 cut(s) 1017, 2271
HindIII AAGCTT 4 cut(s) 19, 338, 966, 1870
HinfI GANTC 6 cut(s) 331, 600, 919, 1169, 1514, 1979
HpaI GTTAAC 1 cut(s) 2271
HpaII CCGG 2 cut(s) 1670, 1997
HphI GGTGA 4 cut(s) 485, 582, 1162, 1933
Hpy166II GTNNAC 8 cut(s) 372, 698, 947, 1017, 2041, 2219, 2271, 2291
Hpy188I TCNGA 7 cut(s) 336, 1337, 1369, 1553, 1582, 2026, 2035
Hpy8I GTNNAC 8 cut(s) 372, 698, 947, 1017, 2041, 2219, 2271, 2291
Hpy99I CGWCG 1 cut(s) 747
HpyAV CCTTC 4 cut(s) 89, 845, 1693, 2393
HpyCH4III ACNGT 7 cut(s) 98, 132, 316, 508, 630, 1230, 1244
HpyCH4IV ACGT 1 cut(s) 1208
HpyCH4V TGCA 7 cut(s) 287, 422, 1221, 1262, 1640, 1821, 2200
HpyF10VI GCNNNNNNNGC 4 cut(s) 1196, 1362, 2206, 2258
HpyF3I CTNAG 7 cut(s) 471, 866, 915, 1579, 1732, 2298, 2326
HpySE526I ACGT 1 cut(s) 1208
Hsp92I GRCGYC 2 cut(s) 617, 1328
Hsp92II CATG 8 cut(s) 46, 523, 705, 927, 1861, 1979, 2011, 2251
HspAI GCGC 2 cut(s) 137, 617
KasI GGCGCC 1 cut(s) 616
Kpn2I TCCGGA 1 cut(s) 1996
Ksp22I TGATCA 2 cut(s) 457, 490
KspAI GTTAAC 1 cut(s) 2271
LmnI GCTCC 6 cut(s) 44, 306, 467, 938, 1029, 1370
Lsp1109I GCAGC 7 cut(s) 299, 333, 406, 1451, 1805, 2088, 2289
LweI GCATC 1 cut(s) 1755
MaeII ACGT 1 cut(s) 1208
MaeIII GTNAC 7 cut(s) 379, 500, 530, 630, 926, 1839, 1921
MflI RGATCY 2 cut(s) 1300, 1342
MhlI GDGCHC 1 cut(s) 791
MlsI TGGCCA 2 cut(s) 165, 266
MluNI TGGCCA 2 cut(s) 165, 266
Mly113I GGCGCC 1 cut(s) 617
MmeI TCCRAC 3 cut(s) 1236, 1315, 2118
Mox20I TGGCCA 2 cut(s) 165, 266
Mph1103I ATGCAT 1 cut(s) 1264
MroI TCCGGA 1 cut(s) 1996
MroXI GAANNNNTTC 1 cut(s) 2020
MscI TGGCCA 2 cut(s) 165, 266
MseI TTAA 9 cut(s) 32, 779, 1269, 1397, 1530, 1824, 1932, 2190, 2270
MslI CAYNNNNRTG 2 cut(s) 498, 2390
Msp20I TGGCCA 2 cut(s) 165, 266
MspA1I CMGCKG 1 cut(s) 1022
MspI CCGG 2 cut(s) 1670, 1997
MspR9I CCNGG 3 cut(s) 162, 594, 1670
MvaI CCWGG 2 cut(s) 162, 594
MvnI CGCG 1 cut(s) 247
MwoI GCNNNNNNNGC 4 cut(s) 1196, 1362, 2206, 2258
NarI GGCGCC 1 cut(s) 617
NciI CCSGG 1 cut(s) 1670
NcoI CCATGG 3 cut(s) 701, 2007, 2247
NdeI CATATG 1 cut(s) 462
NheI GCTAGC 2 cut(s) 1472, 2381
NlaIII CATG 8 cut(s) 46, 523, 705, 927, 1861, 1979, 2011, 2251
NlaIV GGNNCC 2 cut(s) 40, 618
NmuCI GTSAC 4 cut(s) 500, 630, 926, 1921
NsiI ATGCAT 1 cut(s) 1264
NspV TTCGAA 1 cut(s) 875
OliI CACNNNNGTG 1 cut(s) 498
PagI TCATGA 1 cut(s) 1975
PdmI GAANNNNTTC 1 cut(s) 2020
PfeI GAWTC 6 cut(s) 331, 600, 919, 1169, 1514, 1979
PflFI GACNNNGTC 2 cut(s) 506, 628
PkrI GCNGC 8 cut(s) 289, 323, 421, 1062, 1441, 1820, 2078, 2304
PluTI GGCGCC 1 cut(s) 620
PsiI TTATAA 1 cut(s) 1677
Psp6I CCWGG 2 cut(s) 160, 592
PspGI CCWGG 2 cut(s) 160, 592
PspN4I GGNNCC 2 cut(s) 40, 618
PspPI GGNCC 5 cut(s) 698, 947, 1293, 1667, 2288
PstI CTGCAG 1 cut(s) 424
PstNI CAGNNNCTG 1 cut(s) 419
PsuI RGATCY 2 cut(s) 1300, 1342
PsyI GACNNNGTC 2 cut(s) 506, 628
RsaI GTAC 3 cut(s) 729, 1008, 2220
RsaNI GTAC 3 cut(s) 728, 1007, 2219
RseI CAYNNNNRTG 2 cut(s) 498, 2390
SaqAI TTAA 9 cut(s) 32, 779, 1269, 1397, 1530, 1824, 1932, 2190, 2270
SatI GCNGC 8 cut(s) 288, 322, 420, 1061, 1440, 1819, 2077, 2303
Sau96I GGNCC 5 cut(s) 698, 947, 1293, 1667, 2288
ScrFI CCNGG 3 cut(s) 162, 594, 1670
SduI GDGCHC 1 cut(s) 791
SfaNI GCATC 1 cut(s) 1755
SfcI CTRYAG 3 cut(s) 291, 420, 2041
SfoI GGCGCC 1 cut(s) 618
SfuI TTCGAA 1 cut(s) 875
SinI GGWCC 4 cut(s) 698, 947, 1293, 2288
SmiI ATTTAAAT 1 cut(s) 2191
SmiMI CAYNNNNRTG 2 cut(s) 498, 2390
SmlI CTYRAG 1 cut(s) 559
SmoI CTYRAG 1 cut(s) 559
SsiI CCGC 4 cut(s) 245, 1022, 1060, 2252
SspDI GGCGCC 1 cut(s) 616
SspI AATATT 2 cut(s) 1936, 2157
StyD4I CCNGG 3 cut(s) 160, 592, 1668
StyI CCWWGG 3 cut(s) 701, 2007, 2247
SwaI ATTTAAAT 1 cut(s) 2191
TaaI ACNGT 7 cut(s) 98, 132, 316, 508, 630, 1230, 1244
TaiI ACGT 1 cut(s) 1211
TaqI TCGA 4 cut(s) 713, 745, 875, 2205
TatI WGTACW 1 cut(s) 2218
TauI GCSGC 1 cut(s) 1063
TfiI GAWTC 6 cut(s) 331, 600, 919, 1169, 1514, 1979
Tru1I TTAA 9 cut(s) 32, 779, 1269, 1397, 1530, 1824, 1932, 2190, 2270
Tru9I TTAA 9 cut(s) 32, 779, 1269, 1397, 1530, 1824, 1932, 2190, 2270
TscAI CASTG 2 cut(s) 101, 1914
TseFI GTSAC 4 cut(s) 500, 630, 926, 1921
TseI GCWGC 7 cut(s) 287, 321, 419, 1439, 1818, 2076, 2302
Tsp45I GTSAC 4 cut(s) 500, 630, 926, 1921
TspDTI ATGAA 8 cut(s) 55, 631, 709, 1171, 1846, 2157, 2166, 2391
TspRI CASTG 2 cut(s) 101, 1914
Tth111I GACNNNGTC 2 cut(s) 506, 628
VpaK11BI GGWCC 4 cut(s) 698, 947, 1293, 2288
XapI RAATTY 3 cut(s) 277, 957, 2362
XcmI CCANNNNNNNNNTGG 1 cut(s) 1979
XmiI GTMKAC 2 cut(s) 371, 2040
XmnI GAANNNNTTC 1 cut(s) 2020
Zsp2I ATGCAT 1 cut(s) 1264
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.