Rroxscaffold_4G00328660

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Forward (+)
61760822 .. 61766087
5266 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00328660.1

Sequence Viewer

Length: 2544 bp
ATGGATACTAGAACCAGAAGCGTCTGTGCTTTAAATGGCTCCATGTTCTTCTTCCTTTTGATTTTCTTATTCAGCTTGCTTCCATCCCATTATCATTGCGCTGACGTTGACGAGATAACTCCTTCGCAACCATTAGCGCAAGGACAAGCTCTAGTTTCCCCTGGCCACATTTTTGAGTTAGGCTTCTTCACTCCTAATAACTCTGCTAACAAGTATGTGGGGATATGGCACAAAGATATATCTCCGCGAAAAGTTGTATGGGTGGCCAACAGAGAAAATCCTCTTGCAGCTACAGACACCTCGGCGAGCTTGACTGTTAGCAGCAATGGGAATCTGAAGCTTGTTGATGGGAAACAGAAGTCTATTTGGTCTACCAATGTTACTTCTTTGGTGTCCTCATTGGATAATAGTTCAGTGGCTGCAGTTCTTTTAGACAATGGAAACTTTGTTGTCAATGATCATCTGGGAGCTGAGTTATGGCAGAGCTTTGATCATCCTTGTGACACAGTCCTGCCAAACATGGTGTTGCGTTACGATAAGTCTGGAAAGGGGAACTTCTTGAGTTCTTGGAAAGCAGAGAATGATCCATCACCAGGGAGATTCTTGCTTGGATTGGCGCCACAGACGCCGTCACAAGTGTTTATTTGGATCAATAATGGATCAAATGATTCACATTCAGTTCCTTACTGGAGAAGTGGGCCATGGGATAAGTCAAGCTTCATTGGTGTACCAGAAATGGATCATCGATATATAAATGGATTTAGTGTAGATGATAACTTAAAGCAGGGCACGCAGGATTTTTCTTATAGTTTATATGACAAACCTGTGGCATACATATACATATCTCCAGAAGGTATAGTGAGGCTTACATTTTCCAAGAATGATGGGAAGTGGTATGTTTACTGGCAGACACCTAAGAATGCATGTGACATTTATGGAGCTTGTGGACCTTTTGGAGTTTGCAAAGCTTCTGCATCTCCAACCTGTAAGTGTTTGAAAGGTTTTGTACCGAAGTCAAGCGCGCAATGGAGCAAAGGAAACTGGACAGGAGGGTGTGTGAGGCAGACCAAATTGTTTTGTGAGAGACAAACAAATAAGTCAGTCTCATCAAGCGGAAAACAAGTTAATGATGATGGGTTTTGGAAGATGGTGAAGTTGAAAATACCAGATTCTCATGAGTTCGTTACTGCTTTCAATGCCGAAGAAACGTCCGATGACTGCAAATTACGGTGCCTAAACAACTGTTCTTGCGTTGCTTATGCATTTGTCAATAATATAGGGTGTTTGGTGTGGTCCAAAGATCTTGTTGATATACAGCAGTTTTCGGCATCTGTCGGAGTAGATCTTTATATTCGCCTAGCACGCTCCGAACTAGGTGAAGGAAAGCCAATAAAGTTAATCGCCAGCCTTACAGCTATTGGTTTTGTGAGTATCTTGGCAGCCATAGTATTCGGATTTTACAGGAGGCAAGCTAACCAGAAGAGACAGAACTTTAAATCGACTGGTATGATTAAGAGTTCAAGAGATGGTCTCCGAGAATATATAGGAAAGCATGATCCCTCAGAGCTAAAGATATATGATTTTGATAGCATACTAATTGCTACAAACAATTTCAGTCTTGCAAACAAACTTGGACAAGGAGGATTTGGCCCAGTTTATAAGGGTATGCTACAAGATGGGAAGGAAGTAGCTGTAAAGAGACTATCTAGTAGCTCAGGACAAGGCATTGAAGAGTTCAAGAACGAGATGCTATTGATCTCCAATCTTCAACATAAAAATCTAGTTAGGATCATGGGTTGCTGCGTGAAAGAGGATGAGAAGTTACTGATTTACGAGTTCATGCCAAACAAAAGCTTGGATACTTTTTTATTCGATACGAGGAAGAGAGGCGTGCTTGATTGGGTGACACGCTTTAATATTATTCAGGGTGTTGCTAGAGGGCTTCTTTATCTTCATCATGATTCGTATGTGAAGGTAATACATAGAGATCTGAAAGTCAGCAACATTCTCTTGGATGAGAAAATGAATCCAAAAATTTCAGATTTTGGATTGGCACGCATAGTTGAAGGAACACAAAATCTAGAAAATACTCAAAAAGTTGTGGGAACACGTGGCTACATGTCTCCCGAGTATGCCATGGGGGGAATTTTTTCTGAAAAATCTGATGTCTACAGCTTCGGGGTTTTGATGTTGGAGATTATTAGCAGCAAGAAGAATACCAGTTTCTCTTTATATGACCAACAGCTAGGCTTTCTAGCCTATATTAAAAACTGGGTCAATTACCCGTCAATGGCAGCTTGCTGGGTCTCCGGTAGGCGTCGTATGCTCTCTAAAAGCATACAACTCGTCAAAAAGTCAAAGCATTTTGCTCTCACTTCCCTTGACTCCTTTCAGGAACTCAGTGGGGATTTTAGGATTTTGAACAATAATGGAATGATACCAATGGTAATGGCTAGTGAAAAGTATGAGAAATCCAACTACCTCACACACAGAGAGATATACAATCACCGGGATCCCAAAACCGAAGATAAACCAAACTCCTAA

Protein Analysis

847

Amino Acids

94.98

Weight (kDa)

8.83

Isoelectric Point (pI)

35.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 85 - 191 5.2e-29 D-mannose binding lectin
S_locus_glycop PF00954 230 - 339 6.4e-30 S-locus glycoprotein domain
PAN_2 PF08276 376 - 438 5.4e-16 PAN-like domain
PK_Tyr_Ser-Thr PF07714 540 - 744 7.9e-48 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 540 - 738 9.3e-45 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1659
AccB1I GGYRCC 2 cut(s) 616, 1230
AccI GTMKAC 2 cut(s) 371, 2169
AccII CGCG 2 cut(s) 247, 1022
AciI CCGC 2 cut(s) 245, 1113
AclWI GGATC 8 cut(s) 578, 656, 667, 747, 1550, 1796, 2507, 2520
AcoI YGGCCR 2 cut(s) 163, 264
AcsI RAATTY 2 cut(s) 2034, 2145
AcuI CTGAAG 1 cut(s) 356
AcvI CACGTG 1 cut(s) 2111
AcyI GRCGYC 3 cut(s) 617, 626, 2317
AfaI GTAC 2 cut(s) 729, 1008
AfiI CCNNNNNNNGG 2 cut(s) 593, 2290
AflIII ACRYGT 2 cut(s) 2108, 2118
AgsI TTSAA 9 cut(s) 997, 1159, 1195, 1521, 1730, 1738, 1769, 2066, 2422
AjnI CCWGG 2 cut(s) 160, 592
Alw26I GTCTC 7 cut(s) 1078, 1108, 1477, 1535, 1693, 2127, 2311
AlwI GGATC 8 cut(s) 578, 656, 667, 747, 1550, 1796, 2507, 2520
AlwNI CAGNNNCTG 1 cut(s) 419
Ama87I CYCGRG 1 cut(s) 2126
AoxI GGCC 4 cut(s) 163, 264, 698, 1648
ApeKI GCWGC 7 cut(s) 287, 321, 419, 1439, 1800, 2205, 2294
ApoI RAATTY 2 cut(s) 2034, 2145
Asp700I GAANNNNTTC 1 cut(s) 2149
AspLEI GCGC 5 cut(s) 101, 139, 619, 1022, 1024
AspS9I GGNCC 4 cut(s) 698, 947, 1293, 1649
AsuC2I CCSGG 1 cut(s) 2510
AsuHPI GGTGA 5 cut(s) 582, 1162, 1388, 1915, 2498
AvaI CYCGRG 1 cut(s) 2126
AvaII GGWCC 2 cut(s) 947, 1293
BaeGI GKGCMC 1 cut(s) 791
BalI TGGCCA 2 cut(s) 165, 266
BamHI GGATCC 1 cut(s) 2512
BanI GGYRCC 2 cut(s) 616, 1230
BbrPI CACGTG 1 cut(s) 2111
BbvI GCAGC 7 cut(s) 299, 333, 406, 1451, 1787, 2217, 2306
BccI CCATC 8 cut(s) 91, 341, 595, 878, 1127, 1141, 1520, 1670
BceAI ACGGC 1 cut(s) 613
BcgI CGANNNNNNTGC 2 cut(s) 2326, 2360
BciT130I CCWGG 2 cut(s) 162, 594
BciVI GTATCC 1 cut(s) 1852
BclI TGATCA 2 cut(s) 457, 490
BcnI CCSGG 1 cut(s) 2510
BcoDI GTCTC 7 cut(s) 1078, 1108, 1477, 1535, 1693, 2127, 2311
BfmI CTRYAG 3 cut(s) 291, 420, 2170
BfoI RGCGCY 1 cut(s) 620
BfuI GTATCC 1 cut(s) 1852
BglII AGATCT 3 cut(s) 1300, 1342, 1987
BisI GCNGC 7 cut(s) 288, 322, 420, 1440, 1801, 2206, 2295
BlsI GCNGC 7 cut(s) 289, 323, 421, 1441, 1802, 2207, 2296
Bme1390I CCNGG 3 cut(s) 162, 594, 2510
Bme18I GGWCC 2 cut(s) 947, 1293
BmeT110I CYCGRG 1 cut(s) 2126
BmgT120I GGNCC 4 cut(s) 698, 947, 1293, 1649
BmiI GGNNCC 4 cut(s) 40, 618, 1232, 2514
BmrFI CCNGG 3 cut(s) 162, 594, 2510
BmrI ACTGGG 2 cut(s) 1646, 2281
BmsI GCATC 3 cut(s) 983, 1337, 1737
BmuI ACTGGG 2 cut(s) 1646, 2281
BplI GAGNNNNNCTC 2 cut(s) 1515, 1547
BpmI CTGGAG 2 cut(s) 709, 831
Bpu10I CCTNAGC 1 cut(s) 1714
BpuEI CTTGAG 1 cut(s) 580
BpuMI CCSGG 1 cut(s) 2510
Bsa29I ATCGAT 1 cut(s) 745
BsaAI YACGTR 1 cut(s) 2111
BsaHI GRCGYC 3 cut(s) 617, 626, 2317
BsaI GGTCTC 2 cut(s) 1535, 2311
BsaJI CCNNGG 5 cut(s) 160, 300, 593, 701, 2136
BsaWI WCCGGW 1 cut(s) 2309
BsaXI ACNNNNNCTCC 2 cut(s) 1041, 1071
Bsc4I CCNNNNNNNGG 2 cut(s) 593, 2290
Bse1I ACTGG 7 cut(s) 692, 908, 1046, 1507, 1652, 2220, 2276
Bse3DI GCAATG 3 cut(s) 94, 331, 1031
BseBI CCWGG 2 cut(s) 162, 594
BseCI ATCGAT 1 cut(s) 745
BseDI CCNNGG 5 cut(s) 160, 300, 593, 701, 2136
BseGI GGATG 4 cut(s) 83, 493, 1819, 2020
BseLI CCNNNNNNNGG 2 cut(s) 593, 2290
BseMI GCAATG 3 cut(s) 94, 331, 1031
BseMII CTCAG 4 cut(s) 462, 1575, 1728, 2413
BseNI ACTGG 7 cut(s) 692, 908, 1046, 1507, 1652, 2220, 2276
BsePI GCGCGC 1 cut(s) 1020
BseSI GKGCMC 1 cut(s) 791
BseXI GCAGC 7 cut(s) 299, 333, 406, 1451, 1787, 2217, 2306
BseYI CCCAGC 1 cut(s) 2301
Bsh1236I CGCG 2 cut(s) 247, 1022
BshFI GGCC 4 cut(s) 165, 266, 700, 1650
BshNI GGYRCC 2 cut(s) 616, 1230
BshVI ATCGAT 1 cut(s) 745
BsiHKCI CYCGRG 1 cut(s) 2126
BsiSI CCGG 2 cut(s) 2310, 2509
BslI CCNNNNNNNGG 2 cut(s) 593, 2290
BsmAI GTCTC 7 cut(s) 1078, 1108, 1477, 1535, 1693, 2127, 2311
BsmI GAATGC 1 cut(s) 925
BsnI GGCC 4 cut(s) 165, 266, 700, 1650
Bso31I GGTCTC 2 cut(s) 1535, 2311
BsoBI CYCGRG 1 cut(s) 2126
Bsp1286I GDGCHC 1 cut(s) 791
Bsp19I CCATGG 2 cut(s) 701, 2136
BspACI CCGC 2 cut(s) 245, 1113
BspANI GGCC 4 cut(s) 165, 266, 700, 1650
BspCNI CTCAG 4 cut(s) 463, 1574, 1727, 2412
BspDI ATCGAT 1 cut(s) 745
BspFNI CGCG 2 cut(s) 247, 1022
BspHI TCATGA 2 cut(s) 1174, 1957
BspLI GGNNCC 4 cut(s) 40, 618, 1232, 2514
BspMAI CTGCAG 1 cut(s) 424
BspPI GGATC 8 cut(s) 578, 656, 667, 747, 1550, 1796, 2507, 2520
BspT107I GGYRCC 2 cut(s) 616, 1230
BspTNI GGTCTC 2 cut(s) 1535, 2311
BsrDI GCAATG 3 cut(s) 94, 331, 1031
BsrI ACTGG 7 cut(s) 692, 908, 1046, 1507, 1652, 2220, 2276
BssECI CCNNGG 5 cut(s) 160, 300, 593, 701, 2136
BssHII GCGCGC 1 cut(s) 1020
BssNI GRCGYC 3 cut(s) 617, 626, 2317
BssT1I CCWWGG 2 cut(s) 701, 2136
Bst2UI CCWGG 2 cut(s) 162, 594
Bst4CI ACNGT 4 cut(s) 316, 508, 1230, 1244
Bst6I CTCTTC 3 cut(s) 1475, 1725, 1877
BstACI GRCGYC 3 cut(s) 617, 626, 2317
BstBAI YACGTR 1 cut(s) 2111
BstDEI CTNAG 5 cut(s) 471, 915, 1561, 1714, 2399
BstDSI CCRYGG 2 cut(s) 701, 2136
BstF5I GGATG 4 cut(s) 83, 493, 1819, 2020
BstFNI CGCG 2 cut(s) 247, 1022
BstH2I RGCGCY 1 cut(s) 620
BstHHI GCGC 5 cut(s) 101, 139, 619, 1022, 1024
BstMAI GTCTC 7 cut(s) 1078, 1108, 1477, 1535, 1693, 2127, 2311
BstMWI GCNNNNNNNGC 5 cut(s) 625, 790, 1196, 1362, 2323
BstNI CCWGG 2 cut(s) 162, 594
BstNSI RCATGY 2 cut(s) 927, 2122
BstSCI CCNGG 3 cut(s) 160, 592, 2508
BstSFI CTRYAG 3 cut(s) 291, 420, 2170
BstSLI GKGCMC 1 cut(s) 791
BstUI CGCG 2 cut(s) 247, 1022
BstV1I GCAGC 7 cut(s) 299, 333, 406, 1451, 1787, 2217, 2306
BstX2I RGATCY 4 cut(s) 1300, 1342, 1987, 2512
BstYI RGATCY 4 cut(s) 1300, 1342, 1987, 2512
Bsu15I ATCGAT 1 cut(s) 745
BsuI GTATCC 1 cut(s) 1852
BsuRI GGCC 4 cut(s) 165, 266, 700, 1650
BsuTUI ATCGAT 1 cut(s) 745
BtgI CCRYGG 2 cut(s) 701, 2136
BtsCI GGATG 4 cut(s) 83, 493, 1819, 2020
BtsIMutI CAGTG 2 cut(s) 420, 2407
CaiI CAGNNNCTG 1 cut(s) 419
CciI TCATGA 2 cut(s) 1174, 1957
CfoI GCGC 5 cut(s) 101, 139, 619, 1022, 1024
Cfr13I GGNCC 4 cut(s) 698, 947, 1293, 1649
ClaI ATCGAT 1 cut(s) 745
CseI GACGC 3 cut(s) 10, 634, 2306
Csp6I GTAC 2 cut(s) 728, 1007
CviQI GTAC 2 cut(s) 728, 1007
DdeI CTNAG 5 cut(s) 471, 915, 1561, 1714, 2399
DinI GGCGCC 1 cut(s) 618
DraI TTTAAA 2 cut(s) 33, 1495
EaeI YGGCCR 2 cut(s) 163, 264
Eam1104I CTCTTC 3 cut(s) 1475, 1725, 1877
EarI CTCTTC 3 cut(s) 1475, 1725, 1877
Eco130I CCWWGG 2 cut(s) 701, 2136
Eco31I GGTCTC 2 cut(s) 1535, 2311
Eco47I GGWCC 2 cut(s) 947, 1293
Eco57I CTGAAG 1 cut(s) 356
Eco72I CACGTG 1 cut(s) 2111
Eco88I CYCGRG 1 cut(s) 2126
EcoRII CCWGG 2 cut(s) 160, 592
EcoT14I CCWWGG 2 cut(s) 701, 2136
EcoT22I ATGCAT 2 cut(s) 925, 1264
EgeI GGCGCC 1 cut(s) 618
EheI GGCGCC 1 cut(s) 618
ErhI CCWWGG 2 cut(s) 701, 2136
FalI AAGNNNNNCTT 4 cut(s) 539, 571, 701, 733
FbaI TGATCA 2 cut(s) 457, 490
FblI GTMKAC 2 cut(s) 371, 2169
Fnu4HI GCNGC 7 cut(s) 288, 322, 420, 1440, 1801, 2206, 2295
FokI GGATG 4 cut(s) 70, 480, 1826, 2027
Fsp4HI GCNGC 7 cut(s) 288, 322, 420, 1440, 1801, 2206, 2295
GlaI GCGC 5 cut(s) 100, 138, 618, 1021, 1023
GluI GCNGC 7 cut(s) 288, 322, 420, 1440, 1801, 2206, 2295
GsaI CCCAGC 1 cut(s) 2305
GsuI CTGGAG 2 cut(s) 709, 831
HaeII RGCGCY 1 cut(s) 620
HaeIII GGCC 4 cut(s) 165, 266, 700, 1650
HapII CCGG 2 cut(s) 2310, 2509
HgaI GACGC 3 cut(s) 10, 634, 2306
HhaI GCGC 5 cut(s) 101, 139, 619, 1022, 1024
Hin1I GRCGYC 3 cut(s) 617, 626, 2317
Hin6I GCGC 5 cut(s) 99, 137, 617, 1020, 1022
HinP1I GCGC 5 cut(s) 99, 137, 617, 1020, 1022
HincII GTYRAC 1 cut(s) 109
HindII GTYRAC 1 cut(s) 109
HindIII AAGCTT 4 cut(s) 338, 715, 966, 1852
HinfI GANTC 7 cut(s) 331, 600, 668, 1169, 1961, 2026, 2384
HpaII CCGG 2 cut(s) 2310, 2509
HphI GGTGA 5 cut(s) 582, 1162, 1388, 1915, 2498
Hpy166II GTNNAC 6 cut(s) 109, 372, 728, 901, 947, 2170
Hpy8I GTNNAC 6 cut(s) 109, 372, 728, 901, 947, 2170
Hpy99I CGWCG 1 cut(s) 2322
HpyAV CCTTC 6 cut(s) 132, 845, 1373, 1675, 1966, 2060
HpyCH4III ACNGT 4 cut(s) 316, 508, 1230, 1244
HpyCH4IV ACGT 3 cut(s) 105, 1208, 2110
HpyCH4V TGCA 8 cut(s) 287, 422, 923, 963, 974, 1221, 1262, 1622
HpyF10VI GCNNNNNNNGC 5 cut(s) 625, 790, 1196, 1362, 2323
HpyF3I CTNAG 5 cut(s) 471, 915, 1561, 1714, 2399
HpySE526I ACGT 3 cut(s) 105, 1208, 2110
Hsp92I GRCGYC 3 cut(s) 617, 626, 2317
HspAI GCGC 5 cut(s) 99, 137, 617, 1020, 1022
KasI GGCGCC 1 cut(s) 616
Ksp22I TGATCA 2 cut(s) 457, 490
LmnI GCTCC 5 cut(s) 44, 467, 938, 1029, 1370
Lsp1109I GCAGC 7 cut(s) 299, 333, 406, 1451, 1787, 2217, 2306
LweI GCATC 3 cut(s) 983, 1337, 1737
MaeII ACGT 3 cut(s) 105, 1208, 2110
MaeIII GTNAC 8 cut(s) 379, 500, 530, 630, 926, 1183, 1821, 1903
MflI RGATCY 4 cut(s) 1300, 1342, 1987, 2512
MhlI GDGCHC 1 cut(s) 791
MlsI TGGCCA 2 cut(s) 165, 266
MluCI AATT 7 cut(s) 1070, 1223, 1596, 1609, 2034, 2145, 2278
MluNI TGGCCA 2 cut(s) 165, 266
Mly113I GGCGCC 1 cut(s) 617
MlyI GAGTC 1 cut(s) 2378
MmeI TCCRAC 4 cut(s) 1004, 1315, 2172, 2499
Mox20I TGGCCA 2 cut(s) 165, 266
Mph1103I ATGCAT 2 cut(s) 925, 1264
MroXI GAANNNNTTC 1 cut(s) 2149
MscI TGGCCA 2 cut(s) 165, 266
MseI TTAA 8 cut(s) 32, 779, 1125, 1397, 1494, 1512, 1914, 2265
MslI CAYNNNNRTG 1 cut(s) 498
Msp20I TGGCCA 2 cut(s) 165, 266
MspI CCGG 2 cut(s) 2310, 2509
MspR9I CCNGG 3 cut(s) 162, 594, 2510
Mva1269I GAATGC 1 cut(s) 925
MvaI CCWGG 2 cut(s) 162, 594
MvnI CGCG 2 cut(s) 247, 1022
MwoI GCNNNNNNNGC 5 cut(s) 625, 790, 1196, 1362, 2323
NarI GGCGCC 1 cut(s) 617
NciI CCSGG 1 cut(s) 2510
NcoI CCATGG 2 cut(s) 701, 2136
NlaIV GGNNCC 4 cut(s) 40, 618, 1232, 2514
NmeAIII GCCGAG 1 cut(s) 281
NmuCI GTSAC 4 cut(s) 500, 630, 926, 1903
NsiI ATGCAT 2 cut(s) 925, 1264
NspI RCATGY 2 cut(s) 927, 2122
PagI TCATGA 2 cut(s) 1174, 1957
PauI GCGCGC 1 cut(s) 1020
PciI ACATGT 1 cut(s) 2118
PctI GAATGC 1 cut(s) 925
PdmI GAANNNNTTC 1 cut(s) 2149
PfeI GAWTC 6 cut(s) 331, 600, 668, 1169, 1961, 2026
PflFI GACNNNGTC 2 cut(s) 506, 628
PkrI GCNGC 7 cut(s) 289, 323, 421, 1441, 1802, 2207, 2296
PleI GAGTC 1 cut(s) 2378
PluTI GGCGCC 1 cut(s) 620
PmaCI CACGTG 1 cut(s) 2111
PmlI CACGTG 1 cut(s) 2111
PpsI GAGTC 1 cut(s) 2378
Ppu21I YACGTR 1 cut(s) 2111
PscI ACATGT 1 cut(s) 2118
PsiI TTATAA 1 cut(s) 1659
Psp6I CCWGG 2 cut(s) 160, 592
PspCI CACGTG 1 cut(s) 2111
PspFI CCCAGC 1 cut(s) 2301
PspGI CCWGG 2 cut(s) 160, 592
PspN4I GGNNCC 4 cut(s) 40, 618, 1232, 2514
PspPI GGNCC 4 cut(s) 698, 947, 1293, 1649
PstI CTGCAG 1 cut(s) 424
PstNI CAGNNNCTG 1 cut(s) 419
PsuI RGATCY 4 cut(s) 1300, 1342, 1987, 2512
PsyI GACNNNGTC 2 cut(s) 506, 628
PteI GCGCGC 1 cut(s) 1020
RsaI GTAC 2 cut(s) 729, 1008
RsaNI GTAC 2 cut(s) 728, 1007
RseI CAYNNNNRTG 1 cut(s) 498
SaqAI TTAA 8 cut(s) 32, 779, 1125, 1397, 1494, 1512, 1914, 2265
SatI GCNGC 7 cut(s) 288, 322, 420, 1440, 1801, 2206, 2295
Sau96I GGNCC 4 cut(s) 698, 947, 1293, 1649
SchI GAGTC 1 cut(s) 2378
ScrFI CCNGG 3 cut(s) 162, 594, 2510
SduI GDGCHC 1 cut(s) 791
SfaNI GCATC 3 cut(s) 983, 1337, 1737
SfcI CTRYAG 3 cut(s) 291, 420, 2170
SfoI GGCGCC 1 cut(s) 618
SinI GGWCC 2 cut(s) 947, 1293
SmiMI CAYNNNNRTG 1 cut(s) 498
SmlI CTYRAG 1 cut(s) 559
SmoI CTYRAG 1 cut(s) 559
Sse9I AATT 7 cut(s) 1070, 1223, 1596, 1609, 2034, 2145, 2278
SsiI CCGC 2 cut(s) 245, 1113
SspDI GGCGCC 1 cut(s) 616
SspI AATATT 1 cut(s) 1918
StyD4I CCNGG 3 cut(s) 160, 592, 2508
StyI CCWWGG 2 cut(s) 701, 2136
TaaI ACNGT 4 cut(s) 316, 508, 1230, 1244
TaiI ACGT 3 cut(s) 108, 1211, 2113
TaqI TCGA 3 cut(s) 745, 1499, 1872
TasI AATT 7 cut(s) 1070, 1223, 1596, 1609, 2034, 2145, 2278
TfiI GAWTC 6 cut(s) 331, 600, 668, 1169, 1961, 2026
Tru1I TTAA 8 cut(s) 32, 779, 1125, 1397, 1494, 1512, 1914, 2265
Tru9I TTAA 8 cut(s) 32, 779, 1125, 1397, 1494, 1512, 1914, 2265
TscAI CASTG 2 cut(s) 420, 2407
TseFI GTSAC 4 cut(s) 500, 630, 926, 1903
TseI GCWGC 7 cut(s) 287, 321, 419, 1439, 1800, 2205, 2294
Tsp45I GTSAC 4 cut(s) 500, 630, 926, 1903
TspDTI ATGAA 4 cut(s) 709, 1828, 1943, 2039
TspRI CASTG 2 cut(s) 420, 2407
Tth111I GACNNNGTC 2 cut(s) 506, 628
VpaK11BI GGWCC 2 cut(s) 947, 1293
XapI RAATTY 2 cut(s) 2034, 2145
XbaI TCTAGA 1 cut(s) 2080
XceI RCATGY 2 cut(s) 927, 2122
XmiI GTMKAC 2 cut(s) 371, 2169
XmnI GAANNNNTTC 1 cut(s) 2149
Zsp2I ATGCAT 2 cut(s) 925, 1264
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.