AT1G61500

cellular response to molecule of fungal origin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0000033
Physical Location & Seq
Reverse (-)
22689623 .. 22693799
4177 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G61500.1

Sequence Viewer

Length: 2415 bp
ATGATGACGAGGTTTGCTTGTTTGCACCTCTTTACCATGTTCTTGTTTACCTTGCTCTCAGGTTCAAGTTCTGCAGTTATAACGACAGAAAGTCCTTTGTCAATGGGACAAACTCTCAGCTCCGCTAATGAGGTTTATGAATTGGGGTTCTTCAGTCCTAATAACACCCAAGATCAGTATGTTGGAATCTGGTTCAAGGATACCATTCCCCGGGTTGTTGTGTGGGTGGCCAATAGAGAGAAGCCTGTTACAGACTCTACGGCATATCTAGCTATAAGCAGCAGTGGAAGTCTTCTGTTACTTAATGGCAAACATGGCACTGTGTGGTCTAGTGGAGTAACTTTTTCCTCTAGCGGGTGTCGTGCAGAGCTTTCAGATAGCGGAAATCTTAAGGTCATAGATAATGTTTCGGAAAGAGCTCTGTGGCAAAGCTTTGATCATCTTGGGGATACACTGCTACATACCTCATCCCTGACGTATAACCTCGCCACCGCTGAGAAGCGGGTGTTGACTTCTTGGAAAAGTTACACCGATCCATCACCTGGCGACTTTTTGGGCCAGATTACACCTCAAGTGCCATCACAGGGGTTCGTTATGAGAGGGTCAACGCCTTACTGGAGAAGCGGTCCATGGGCTAAAACAAGGTTCACTGGGATACCGTTTATGGATGAATCATACACAGGTCCATTCACCCTTCACCAGGATGTAAACGGGTCAGGATACTTGACTTATTTTCAAAGAGACTACAAACTTTCACGTATAACTTTAACATCAGAGGGATCAATAAAGATGTTTCGGGATAATGGAATGGGCTGGGAATTGTACTATGAGGCTCCAAAAAAATTATGCGATTTTTATGGTGCGTGTGGACCATTTGGGTTGTGTGTTATGTCACCTTCTCCCATGTGTAAATGCTTCAGAGGTTTTGTACCAAAATCTGTTGAGGAGTGGAAAAGGGGAAACTGGACTGGTGGTTGTGTGAGGCATACCGAACTAGATTGTCTAGGAAACTCTACTGGCGAAGATGCAGATGACTTCCATCAAATTGCCAACATAAAGCCTCCAGACTTTTATGAATTTGCAAGTTCTGTGAATGCTGAAGAATGCCACCAACGTTGCGTCCACAATTGTTCTTGCTTGGCATTTGCTTATATTAAGGGAATAGGGTGCCTAGTGTGGAACCAGGACCTAATGGATGCCGTACAATTTTCTGCAACAGGAGAACTTCTTTCCATTCGTCTTGCACGATCTGAGCTAGATGGAAATAAGCGCAAGAAGACTATTGTTGCTAGTATAGTGAGCCTGACTCTATTCATGATCTTGGGCTTCACTGCGTTTGGTGTCTGGAGATGCAGAGTGGAACATATCGCTCATATATCAAAGGATGCATGGAAGAATGATCTGAAACCACAAGATGTCCCAGGTTTAGATTTCTTTGATATGCATACCATTCAAAACGCCACCAATAATTTTAGTCTATCAAACAAACTCGGACAAGGTGGATTTGGTTCAGTTTACAAGGGAAAGCTGCAAGATGGGAAAGAAATTGCTGTTAAACGGCTTTCTAGCAGCTCTGGACAGGGAAAAGAGGAGTTTATGAATGAAATAGTACTCATCTCAAAACTCCAACACAGAAACTTAGTCAGGGTTTTGGGATGTTGCATCGAAGAAGAAGAGAAGCTATTGATTTATGAGTTTATGGTGAACAAAAGCCTTGATACCTTTCTCTTTGATTCAAGAAAAAGGCTGGAGATTGATTGGCCAAAAAGATTTGATATCATTCAAGGTATTGCACGTGGACTTCTCTATCTCCACCATGACTCACGCCTCAGAGTTATTCACCGAGACCTGAAGGTCAGCAACATCCTTCTGGATGAGAAAATGAACCCAAAAATATCAGATTTTGGATTGGCTCGGATGTATCAGGGGACCGAATATCAGGATAACACTCGCAGGGTTGTAGGAACTCTAGGATATATGTCTCCAGAGTATGCATGGACTGGGATGTTCTCTGAGAAATCTGACATCTACAGCTTCGGAGTTCTAATGTTAGAAATCATCAGTGGAGAGAAGATCTCAAGATTCAGCTATGGCGTAGAAGGAAAAACCCTTATTGCATATGCGTGGGAATCTTGGTCTGAATACAGAGGAATTGATCTTTTGGACCAAGATCTTGCTGATTCATGTCACCCATTAGAAGTTGGGAGATGTATTCAAATCGGCTTGCTCTGTGTACAACACCAACCTGCAGACAGACCCAACACACTTGAGTTGCTGGCTATGCTCACCACAACATCAGATCTTCCATCACCAAAACAACCCACATTTGCATTTCACACGAGAGATGACGAATCACTGTCTAACGATTTGATCACCGTCAATGGGATGACGCAATCTGTGATCCTTGGGCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000165 GO:0000166 GO:0000187 GO:0000302 GO:0001568 GO:0001772 GO:0001775 GO:0001784 GO:0001817 GO:0001819 GO:0001820 GO:0001932 GO:0001934 GO:0001944 GO:0001945 GO:0001959 GO:0002090 GO:0002092 GO:0002218 GO:0002220 GO:0002223 GO:0002238 GO:0002250 GO:0002252 GO:0002253 GO:0002263 GO:0002274 GO:0002275 GO:0002281 GO:0002283 GO:0002351 GO:0002366 GO:0002376 GO:0002429 GO:0002431 GO:0002433 GO:0002442 GO:0002520 GO:0002521 GO:0002532 GO:0002554 GO:0002576 GO:0002682 GO:0002684 GO:0002694 GO:0002696 GO:0002697 GO:0002699 GO:0002703 GO:0002705 GO:0002757 GO:0002758 GO:0002764 GO:0002768 GO:0002791 GO:0002793 GO:0002886 GO:0002888 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004713 GO:0004715 GO:0005102 GO:0005178 GO:0005488 GO:0005515 GO:0005516 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006082 GO:0006355 GO:0006464 GO:0006468 GO:0006606 GO:0006690 GO:0006691 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0006836 GO:0006837 GO:0006886 GO:0006887 GO:0006897 GO:0006898 GO:0006909 GO:0006913 GO:0006928 GO:0006935 GO:0006950 GO:0006952 GO:0006954 GO:0006955 GO:0006979 GO:0007154 GO:0007155 GO:0007159 GO:0007165 GO:0007166 GO:0007167 GO:0007169 GO:0007186 GO:0007229 GO:0007254 GO:0007257 GO:0007275 GO:0007596 GO:0007599 GO:0008104 GO:0008144 GO:0008150 GO:0008152 GO:0008283 GO:0008284 GO:0009058 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009636 GO:0009653 GO:0009719 GO:0009887 GO:0009889 GO:0009891 GO:0009893 GO:0009898 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010035 GO:0010243 GO:0010468 GO:0010543 GO:0010556 GO:0010557 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0010803 GO:0015031 GO:0015696 GO:0015833 GO:0015844 GO:0015850 GO:0016020 GO:0016053 GO:0016192 GO:0016301 GO:0016310 GO:0016477 GO:0016740 GO:0016772 GO:0016773 GO:0017038 GO:0017076 GO:0017157 GO:0018105 GO:0018108 GO:0018193 GO:0018209 GO:0018212 GO:0019219 GO:0019220 GO:0019221 GO:0019222 GO:0019370 GO:0019538 GO:0019752 GO:0019814 GO:0019815 GO:0019897 GO:0019898 GO:0019899 GO:0019900 GO:0019901 GO:0019902 GO:0019904 GO:0022407 GO:0022409 GO:0022610 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0030054 GO:0030097 GO:0030098 GO:0030100 GO:0030139 GO:0030154 GO:0030155 GO:0030168 GO:0030193 GO:0030217 GO:0030554 GO:0030593 GO:0030595 GO:0031098 GO:0031234 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031347 GO:0031349 GO:0031399 GO:0031401 GO:0031410 GO:0031623 GO:0031625 GO:0031952 GO:0031954 GO:0031982 GO:0032009 GO:0032101 GO:0032147 GO:0032268 GO:0032270 GO:0032303 GO:0032368 GO:0032386 GO:0032388 GO:0032479 GO:0032481 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032645 GO:0032672 GO:0032673 GO:0032725 GO:0032752 GO:0032753 GO:0032872 GO:0032874 GO:0032879 GO:0032880 GO:0032890 GO:0032928 GO:0032940 GO:0032944 GO:0032946 GO:0032991 GO:0033003 GO:0033005 GO:0033006 GO:0033008 GO:0033036 GO:0033077 GO:0033365 GO:0033554 GO:0033628 GO:0033630 GO:0033674 GO:0034097 GO:0034103 GO:0034105 GO:0034110 GO:0034504 GO:0034599 GO:0034613 GO:0034614 GO:0035239 GO:0035295 GO:0035325 GO:0035556 GO:0035639 GO:0035690 GO:0036094 GO:0036211 GO:0036230 GO:0038063 GO:0038065 GO:0038083 GO:0038093 GO:0038094 GO:0038095 GO:0038096 GO:0038110 GO:0038156 GO:0040011 GO:0042035 GO:0042060 GO:0042101 GO:0042102 GO:0042108 GO:0042110 GO:0042113 GO:0042116 GO:0042119 GO:0042127 GO:0042129 GO:0042169 GO:0042221 GO:0042325 GO:0042327 GO:0042330 GO:0042493 GO:0042542 GO:0042742 GO:0042886 GO:0043085 GO:0043112 GO:0043167 GO:0043168 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043235 GO:0043269 GO:0043300 GO:0043302 GO:0043304 GO:0043306 GO:0043313 GO:0043366 GO:0043368 GO:0043383 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043436 GO:0043506 GO:0043507 GO:0043549 GO:0044070 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044389 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0044877 GO:0045055 GO:0045058 GO:0045059 GO:0045060 GO:0045061 GO:0045087 GO:0045088 GO:0045089 GO:0045124 GO:0045184 GO:0045309 GO:0045321 GO:0045335 GO:0045399 GO:0045401 GO:0045423 GO:0045425 GO:0045577 GO:0045579 GO:0045580 GO:0045582 GO:0045586 GO:0045588 GO:0045595 GO:0045597 GO:0045619 GO:0045621 GO:0045780 GO:0045785 GO:0045807 GO:0045859 GO:0045860 GO:0045921 GO:0045937 GO:0046328 GO:0046330 GO:0046394 GO:0046456 GO:0046631 GO:0046632 GO:0046634 GO:0046635 GO:0046637 GO:0046638 GO:0046640 GO:0046641 GO:0046643 GO:0046645 GO:0046649 GO:0046677 GO:0046777 GO:0046850 GO:0046852 GO:0046903 GO:0046907 GO:0048259 GO:0048260 GO:0048513 GO:0048514 GO:0048518 GO:0048522 GO:0048534 GO:0048583 GO:0048584 GO:0048731 GO:0048856 GO:0048869 GO:0048870 GO:0050670 GO:0050671 GO:0050707 GO:0050708 GO:0050714 GO:0050715 GO:0050730 GO:0050731 GO:0050764 GO:0050776 GO:0050778 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050817 GO:0050818 GO:0050839 GO:0050848 GO:0050850 GO:0050851 GO:0050852 GO:0050853 GO:0050863 GO:0050864 GO:0050865 GO:0050867 GO:0050870 GO:0050871 GO:0050878 GO:0050896 GO:0050900 GO:0051046 GO:0051047 GO:0051049 GO:0051050 GO:0051090 GO:0051094 GO:0051128 GO:0051130 GO:0051169 GO:0051170 GO:0051171 GO:0051173 GO:0051174 GO:0051179 GO:0051219 GO:0051222 GO:0051223 GO:0051234 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051249 GO:0051251 GO:0051252 GO:0051338 GO:0051347 GO:0051403 GO:0051641 GO:0051649 GO:0051674 GO:0051704 GO:0051707 GO:0051716 GO:0055094 GO:0060255 GO:0060326 GO:0060341 GO:0060627 GO:0060759 GO:0061041 GO:0065007 GO:0065008 GO:0065009 GO:0070201 GO:0070301 GO:0070302 GO:0070304 GO:0070372 GO:0070486 GO:0070489 GO:0070663 GO:0070665 GO:0070669 GO:0070727 GO:0070887 GO:0071216 GO:0071226 GO:0071236 GO:0071310 GO:0071345 GO:0071352 GO:0071402 GO:0071404 GO:0071593 GO:0071621 GO:0071702 GO:0071704 GO:0071705 GO:0071900 GO:0071902 GO:0071944 GO:0072358 GO:0072359 GO:0072594 GO:0072676 GO:0072678 GO:0080090 GO:0080134 GO:0080135 GO:0090087 GO:0090237 GO:0090322 GO:0090330 GO:0097159 GO:0097237 GO:0097367 GO:0097529 GO:0097530 GO:0097708 GO:0098542 GO:0098552 GO:0098562 GO:0098609 GO:0098657 GO:0098796 GO:0098797 GO:0098802 GO:0140029 GO:0140096 GO:1900046 GO:1900084 GO:1900086 GO:1901265 GO:1901363 GO:1901564 GO:1901568 GO:1901570 GO:1901576 GO:1901698 GO:1901700 GO:1901701 GO:1902105 GO:1902107 GO:1902531 GO:1902533 GO:1902563 GO:1903034 GO:1903037 GO:1903039 GO:1903305 GO:1903307 GO:1903506 GO:1903530 GO:1903532 GO:1903706 GO:1903708 GO:1904951 GO:1905952 GO:1990266 GO:2000026 GO:2000112 GO:2000191 GO:2000377 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04014 ko04064 ko04072 ko04151 ko04380 ko04611 ko04650 ko04658 ko04659 ko04660 ko04662 ko04664 ko04666 ko05152 ko05167 ko05169 ko05203 ko05340 map04014 map04064 map04072 map04151 map04380 map04611 map04650 map04658 map04659 map04660 map04662 map04664 map04666 map05152 map05167 map05169 map05203 map05340
Pfam Domains
Protein Families
Pkinase_Tyr SH2 S_locus_glycop

Protein Analysis

804

Amino Acids

90.33

Weight (kDa)

6.06

Isoelectric Point (pI)

41.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 73 - 174 5.4e-29 D-mannose binding lectin
S_locus_glycop PF00954 206 - 313 2.9e-35 S-locus glycoprotein domain
PAN_2 PF08276 341 - 399 2.5e-20 PAN-like domain
Pkinase PF00069 492 - 694 4e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 493 - 760 4.2e-50 Protein tyrosine and serine/threonine kinase
DUF3403 PF11883 763 - 804 3.5e-18 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 80
AasI GACNNNNNNGTC 1 cut(s) 1853
Acc36I ACCTGC 1 cut(s) 2254
AccB1I GGYRCC 1 cut(s) 1167
AccB7I CCANNNNNTGG 1 cut(s) 542
AciI CCGC 6 cut(s) 123, 354, 381, 492, 502, 624
AclI AACGTT 1 cut(s) 1114
AclWI GGATC 3 cut(s) 527, 787, 2395
AcoI YGGCCR 2 cut(s) 228, 1760
AcsI RAATTY 1 cut(s) 1076
AcuI CTGAAG 4 cut(s) 136, 901, 1119, 1871
AcvI CACGTG 1 cut(s) 1796
AdeI CACNNNGTG 1 cut(s) 324
AfaI GTAC 5 cut(s) 824, 930, 1203, 1611, 2235
AfiI CCNNNNNNNGG 6 cut(s) 210, 354, 542, 584, 700, 2382
AflII CTTAAG 1 cut(s) 389
AgsI TTSAA 7 cut(s) 66, 196, 737, 1454, 1737, 1784, 2216
AhdI GACNNNNNGTC 1 cut(s) 90
AjnI CCWGG 4 cut(s) 541, 699, 1182, 1420
Alw21I GWGCWC 1 cut(s) 421
Alw26I GTCTC 3 cut(s) 735, 1839, 1986
AlwI GGATC 3 cut(s) 527, 787, 2395
Ama87I CYCGRG 1 cut(s) 210
AoxI GGCC 3 cut(s) 228, 556, 1760
ApeKI GCWGC 3 cut(s) 279, 1528, 1569
ApoI RAATTY 1 cut(s) 1076
AspLEI GCGC 1 cut(s) 1272
AspS9I GGNCC 7 cut(s) 556, 626, 683, 869, 1186, 1929, 2164
AsuC2I CCSGG 2 cut(s) 211, 212
AvaI CYCGRG 1 cut(s) 210
AvaII GGWCC 6 cut(s) 626, 683, 869, 1186, 1929, 2164
BalI TGGCCA 2 cut(s) 230, 1762
BanI GGYRCC 1 cut(s) 1167
BanII GRGCYC 1 cut(s) 421
BauI CACGAG 1 cut(s) 2338
BbrPI CACGTG 1 cut(s) 1796
BbsI GAAGAC 2 cut(s) 284, 1283
Bbv12I GWGCWC 1 cut(s) 421
BbvI GCAGC 3 cut(s) 291, 1515, 1581
BccI CCATC 6 cut(s) 544, 586, 1047, 1253, 1529, 2314
BceAI ACGGC 3 cut(s) 276, 1184, 1574
BciT130I CCWGG 4 cut(s) 543, 701, 1184, 1422
BciVI GTATCC 4 cut(s) 193, 442, 648, 713
BclI TGATCA 2 cut(s) 436, 2370
BcnI CCSGG 2 cut(s) 211, 212
BcoDI GTCTC 3 cut(s) 735, 1839, 1986
BfmI CTRYAG 3 cut(s) 72, 2029, 2247
BfrI CTTAAG 1 cut(s) 389
BfuAI ACCTGC 1 cut(s) 2254
BfuI GTATCC 4 cut(s) 193, 442, 648, 713
BglII AGATCT 3 cut(s) 2073, 2170, 2299
BisI GCNGC 3 cut(s) 280, 1529, 1570
BlsI GCNGC 3 cut(s) 281, 1530, 1571
BmcAI AGTACT 1 cut(s) 1611
Bme1390I CCNGG 6 cut(s) 211, 212, 543, 701, 1184, 1422
Bme18I GGWCC 6 cut(s) 626, 683, 869, 1186, 1929, 2164
BmeRI GACNNNNNGTC 1 cut(s) 90
BmeT110I CYCGRG 1 cut(s) 210
BmgT120I GGNCC 7 cut(s) 556, 626, 683, 869, 1186, 1929, 2164
BmiI GGNNCC 4 cut(s) 834, 1169, 1181, 1930
BmrFI CCNGG 6 cut(s) 211, 212, 543, 701, 1184, 1422
BmrI ACTGGG 2 cut(s) 660, 2010
BmsI GCATC 5 cut(s) 1015, 1186, 1340, 1375, 1671
BmuI ACTGGG 2 cut(s) 660, 2010
BpiI GAAGAC 2 cut(s) 284, 1283
BplI GAGNNNNNCTC 4 cut(s) 1291, 1323, 2060, 2092
BpmI CTGGAG 5 cut(s) 637, 1047, 1366, 1769, 1968
BpuEI CTTGAG 3 cut(s) 555, 2062, 2288
BpuMI CCSGG 2 cut(s) 211, 212
BsaAI YACGTR 2 cut(s) 758, 1796
BsaI GGTCTC 1 cut(s) 1839
BsaJI CCNNGG 5 cut(s) 209, 210, 629, 1420, 2404
BsaXI ACNNNNNCTCC 2 cut(s) 610, 640
Bsc4I CCNNNNNNNGG 6 cut(s) 210, 354, 542, 584, 700, 2382
Bse1I ACTGG 6 cut(s) 620, 655, 968, 973, 1021, 2005
BseBI CCWGG 4 cut(s) 543, 701, 1184, 1422
BseDI CCNNGG 5 cut(s) 209, 210, 629, 1420, 2404
BseLI CCNNNNNNNGG 6 cut(s) 210, 354, 542, 584, 700, 2382
BseMII CTCAG 6 cut(s) 72, 130, 486, 1242, 1843, 2004
BseNI ACTGG 6 cut(s) 620, 655, 968, 973, 1021, 2005
BseRI GAGGAG 2 cut(s) 959, 1604
BseXI GCAGC 3 cut(s) 291, 1515, 1581
BseYI CCCAGC 1 cut(s) 813
BsgI GTGCAG 1 cut(s) 384
BshFI GGCC 3 cut(s) 230, 558, 1762
BshNI GGYRCC 1 cut(s) 1167
BsiHKAI GWGCWC 1 cut(s) 421
BsiHKCI CYCGRG 1 cut(s) 210
BsiSI CCGG 1 cut(s) 211
BslFI GGGAC 3 cut(s) 120, 1403, 1942
BslI CCNNNNNNNGG 6 cut(s) 210, 354, 542, 584, 700, 2382
BsmAI GTCTC 3 cut(s) 735, 1839, 1986
BsmFI GGGAC 3 cut(s) 120, 1403, 1942
BsmI GAATGC 2 cut(s) 1099, 1109
BsnI GGCC 3 cut(s) 230, 558, 1762
Bso31I GGTCTC 1 cut(s) 1839
BsoBI CYCGRG 1 cut(s) 210
Bsp1286I GDGCHC 1 cut(s) 421
Bsp1407I TGTACA 1 cut(s) 2233
Bsp19I CCATGG 1 cut(s) 629
BspACI CCGC 6 cut(s) 123, 354, 381, 492, 502, 624
BspANI GGCC 3 cut(s) 230, 558, 1762
BspCNI CTCAG 6 cut(s) 71, 129, 487, 1243, 1842, 2005
BspHI TCATGA 1 cut(s) 1314
BspLI GGNNCC 4 cut(s) 834, 1169, 1181, 1930
BspMAI CTGCAG 2 cut(s) 76, 2251
BspMI ACCTGC 1 cut(s) 2254
BspPI GGATC 3 cut(s) 527, 787, 2395
BspT107I GGYRCC 1 cut(s) 1167
BspTI CTTAAG 1 cut(s) 389
BspTNI GGTCTC 1 cut(s) 1839
BsrGI TGTACA 1 cut(s) 2233
BsrI ACTGG 6 cut(s) 620, 655, 968, 973, 1021, 2005
BssECI CCNNGG 5 cut(s) 209, 210, 629, 1420, 2404
BssSI CACGAG 1 cut(s) 2338
BssT1I CCWWGG 2 cut(s) 629, 2404
Bst2BI CACGAG 1 cut(s) 2338
Bst2UI CCWGG 4 cut(s) 543, 701, 1184, 1422
Bst4CI ACNGT 4 cut(s) 322, 660, 2358, 2377
Bst6I CTCTTC 1 cut(s) 1668
BstAFI CTTAAG 1 cut(s) 389
BstAUI TGTACA 1 cut(s) 2233
BstBAI YACGTR 2 cut(s) 758, 1796
BstC8I GCNNGC 2 cut(s) 2225, 2277
BstDEI CTNAG 7 cut(s) 58, 116, 495, 1251, 1639, 1829, 2013
BstDSI CCRYGG 1 cut(s) 629
BstENI CCTNNNNNAGG 1 cut(s) 698
BstHHI GCGC 1 cut(s) 1272
BstMAI GTCTC 3 cut(s) 735, 1839, 1986
BstMWI GCNNNNNNNGC 3 cut(s) 269, 315, 2281
BstNI CCWGG 4 cut(s) 543, 701, 1184, 1422
BstSCI CCNGG 6 cut(s) 209, 210, 541, 699, 1182, 1420
BstSFI CTRYAG 3 cut(s) 72, 2029, 2247
BstV1I GCAGC 3 cut(s) 291, 1515, 1581
BstV2I GAAGAC 2 cut(s) 284, 1283
BstX2I RGATCY 3 cut(s) 2073, 2170, 2299
BstYI RGATCY 3 cut(s) 2073, 2170, 2299
BsuI GTATCC 4 cut(s) 193, 442, 648, 713
BsuRI GGCC 3 cut(s) 230, 558, 1762
BtgI CCRYGG 1 cut(s) 629
BtsI GCAGTG 3 cut(s) 289, 452, 1329
BtsIMutI CAGTG 7 cut(s) 289, 318, 452, 648, 1329, 2068, 2354
BveI ACCTGC 1 cut(s) 2254
Cac8I GCNNGC 2 cut(s) 2225, 2277
CciI TCATGA 1 cut(s) 1314
CfoI GCGC 1 cut(s) 1272
Cfr13I GGNCC 7 cut(s) 556, 626, 683, 869, 1186, 1929, 2164
Cfr9I CCCGGG 1 cut(s) 210
CseI GACGC 2 cut(s) 1108, 2398
Csp6I GTAC 5 cut(s) 823, 929, 1202, 1610, 2234
CspCI CAANNNNNGTGG 2 cut(s) 1097, 1132
CviAII CATG 9 cut(s) 37, 314, 630, 904, 1315, 1389, 1817, 1995, 2184
CviQI GTAC 5 cut(s) 823, 929, 1202, 1610, 2234
DdeI CTNAG 7 cut(s) 58, 116, 495, 1251, 1639, 1829, 2013
DraIII CACNNNGTG 1 cut(s) 324
DrdI GACNNNNNNGTC 1 cut(s) 1853
DriI GACNNNNNGTC 1 cut(s) 90
DseDI GACNNNNNNGTC 1 cut(s) 1853
EaeI YGGCCR 2 cut(s) 228, 1760
Eam1104I CTCTTC 1 cut(s) 1668
Eam1105I GACNNNNNGTC 1 cut(s) 90
EarI CTCTTC 1 cut(s) 1668
Ecl136II GAGCTC 1 cut(s) 419
Eco130I CCWWGG 2 cut(s) 629, 2404
Eco24I GRGCYC 1 cut(s) 421
Eco31I GGTCTC 1 cut(s) 1839
Eco32I GATATC 1 cut(s) 1777
Eco47I GGWCC 6 cut(s) 626, 683, 869, 1186, 1929, 2164
Eco53kI GAGCTC 1 cut(s) 419
Eco57I CTGAAG 4 cut(s) 136, 901, 1119, 1871
Eco72I CACGTG 1 cut(s) 1796
Eco88I CYCGRG 1 cut(s) 210
EcoICRI GAGCTC 1 cut(s) 419
EcoNI CCTNNNNNAGG 1 cut(s) 698
EcoO109I RGGNCCY 1 cut(s) 1186
EcoRII CCWGG 4 cut(s) 541, 699, 1182, 1420
EcoRV GATATC 1 cut(s) 1777
EcoT14I CCWWGG 2 cut(s) 629, 2404
EcoT22I ATGCAT 3 cut(s) 1390, 1446, 1996
EcoT38I GRGCYC 1 cut(s) 421
ErhI CCWWGG 2 cut(s) 629, 2404
FaeI CATG 9 cut(s) 40, 317, 633, 907, 1318, 1392, 1820, 1998, 2187
FaqI GGGAC 3 cut(s) 120, 1403, 1942
FatI CATG 9 cut(s) 36, 313, 629, 903, 1314, 1388, 1816, 1994, 2183
FauI CCCGC 2 cut(s) 347, 495
FauNDI CATATG 1 cut(s) 2119
FbaI TGATCA 2 cut(s) 436, 2370
Fnu4HI GCNGC 3 cut(s) 280, 1529, 1570
FriOI GRGCYC 1 cut(s) 421
Fsp4HI GCNGC 3 cut(s) 280, 1529, 1570
GlaI GCGC 1 cut(s) 1271
GluI GCNGC 3 cut(s) 280, 1529, 1570
GsaI CCCAGC 1 cut(s) 817
GsuI CTGGAG 5 cut(s) 637, 1047, 1366, 1769, 1968
HaeIII GGCC 3 cut(s) 230, 558, 1762
HapII CCGG 1 cut(s) 211
HgaI GACGC 2 cut(s) 1108, 2398
HhaI GCGC 1 cut(s) 1272
Hin1II CATG 9 cut(s) 40, 317, 633, 907, 1318, 1392, 1820, 1998, 2187
Hin6I GCGC 1 cut(s) 1270
HinP1I GCGC 1 cut(s) 1270
HincII GTYRAC 2 cut(s) 510, 606
HindII GTYRAC 2 cut(s) 510, 606
HindIII AAGCTT 1 cut(s) 430
HpaII CCGG 1 cut(s) 211
HpyAV CCTTC 5 cut(s) 704, 906, 1846, 1877, 2093
HpyCH4III ACNGT 4 cut(s) 322, 660, 2358, 2377
HpyCH4IV ACGT 4 cut(s) 476, 757, 1114, 1795
HpyF10VI GCNNNNNNNGC 3 cut(s) 269, 315, 2281
HpyF3I CTNAG 7 cut(s) 58, 116, 495, 1251, 1639, 1829, 2013
HpySE526I ACGT 4 cut(s) 476, 757, 1114, 1795
Hsp92II CATG 9 cut(s) 40, 317, 633, 907, 1318, 1392, 1820, 1998, 2187
HspAI GCGC 1 cut(s) 1270
Ksp22I TGATCA 2 cut(s) 436, 2370
LmnI GCTCC 2 cut(s) 125, 838
Lsp1109I GCAGC 3 cut(s) 291, 1515, 1581
LweI GCATC 5 cut(s) 1015, 1186, 1340, 1375, 1671
MaeII ACGT 4 cut(s) 476, 757, 1114, 1795
MaeIII GTNAC 6 cut(s) 247, 297, 337, 524, 891, 2186
MfeI CAATTG 1 cut(s) 1126
MflI RGATCY 3 cut(s) 2073, 2170, 2299
MhlI GDGCHC 1 cut(s) 421
MlsI TGGCCA 2 cut(s) 230, 1762
MluNI TGGCCA 2 cut(s) 230, 1762
MlyI GAGTC 3 cut(s) 248, 1300, 1814
MmeI TCCRAC 2 cut(s) 163, 1651
Mox20I TGGCCA 2 cut(s) 230, 1762
Mph1103I ATGCAT 3 cut(s) 1390, 1446, 1996
MscI TGGCCA 2 cut(s) 230, 1762
MseI TTAA 6 cut(s) 303, 390, 767, 1155, 1554, 2413
MslI CAYNNNNRTG 2 cut(s) 702, 2122
Msp20I TGGCCA 2 cut(s) 230, 1762
MspA1I CMGCKG 1 cut(s) 494
MspCI CTTAAG 1 cut(s) 389
MspI CCGG 1 cut(s) 211
MspR9I CCNGG 6 cut(s) 211, 212, 543, 701, 1184, 1422
MunI CAATTG 1 cut(s) 1126
Mva1269I GAATGC 2 cut(s) 1099, 1109
MvaI CCWGG 4 cut(s) 543, 701, 1184, 1422
MwoI GCNNNNNNNGC 3 cut(s) 269, 315, 2281
NciI CCSGG 2 cut(s) 211, 212
NcoI CCATGG 1 cut(s) 629
NdeI CATATG 1 cut(s) 2119
NlaIII CATG 9 cut(s) 40, 317, 633, 907, 1318, 1392, 1820, 1998, 2187
NlaIV GGNNCC 4 cut(s) 834, 1169, 1181, 1930
NmuCI GTSAC 2 cut(s) 891, 2186
NsiI ATGCAT 3 cut(s) 1390, 1446, 1996
PagI TCATGA 1 cut(s) 1314
PcsI WCGNNNNNNNCGW 1 cut(s) 1243
PctI GAATGC 2 cut(s) 1099, 1109
PfeI GAWTC 7 cut(s) 186, 671, 1733, 2082, 2129, 2180, 2351
PflMI CCANNNNNTGG 1 cut(s) 542
PkrI GCNGC 3 cut(s) 281, 1530, 1571
PleI GAGTC 3 cut(s) 248, 1300, 1814
PmaCI CACGTG 1 cut(s) 1796
PmlI CACGTG 1 cut(s) 1796
PpsI GAGTC 3 cut(s) 248, 1300, 1814
Ppu21I YACGTR 2 cut(s) 758, 1796
PpuMI RGGWCCY 1 cut(s) 1186
PsiI TTATAA 1 cut(s) 80
Psp124BI GAGCTC 1 cut(s) 421
Psp1406I AACGTT 1 cut(s) 1114
Psp5II RGGWCCY 1 cut(s) 1186
Psp6I CCWGG 4 cut(s) 541, 699, 1182, 1420
PspCI CACGTG 1 cut(s) 1796
PspFI CCCAGC 1 cut(s) 813
PspGI CCWGG 4 cut(s) 541, 699, 1182, 1420
PspN4I GGNNCC 4 cut(s) 834, 1169, 1181, 1930
PspPI GGNCC 7 cut(s) 556, 626, 683, 869, 1186, 1929, 2164
PspPPI RGGWCCY 1 cut(s) 1186
PstI CTGCAG 2 cut(s) 76, 2251
PsuI RGATCY 3 cut(s) 2073, 2170, 2299
RsaI GTAC 5 cut(s) 824, 930, 1203, 1611, 2235
RsaNI GTAC 5 cut(s) 823, 929, 1202, 1610, 2234
RseI CAYNNNNRTG 2 cut(s) 702, 2122
SacI GAGCTC 1 cut(s) 421
SaqAI TTAA 6 cut(s) 303, 390, 767, 1155, 1554, 2413
SatI GCNGC 3 cut(s) 280, 1529, 1570
Sau96I GGNCC 7 cut(s) 556, 626, 683, 869, 1186, 1929, 2164
ScaI AGTACT 1 cut(s) 1611
SchI GAGTC 3 cut(s) 248, 1300, 1814
ScrFI CCNGG 6 cut(s) 211, 212, 543, 701, 1184, 1422
SduI GDGCHC 1 cut(s) 421
SfaNI GCATC 5 cut(s) 1015, 1186, 1340, 1375, 1671
SfcI CTRYAG 3 cut(s) 72, 2029, 2247
SinI GGWCC 6 cut(s) 626, 683, 869, 1186, 1929, 2164
SmaI CCCGGG 1 cut(s) 212
SmiMI CAYNNNNRTG 2 cut(s) 702, 2122
SmlI CTYRAG 4 cut(s) 389, 570, 2077, 2267
SmoI CTYRAG 4 cut(s) 389, 570, 2077, 2267
SsiI CCGC 6 cut(s) 123, 354, 381, 492, 502, 624
SstI GAGCTC 1 cut(s) 421
StyD4I CCNGG 6 cut(s) 209, 210, 541, 699, 1182, 1420
StyI CCWWGG 2 cut(s) 629, 2404
TaaI ACNGT 4 cut(s) 322, 660, 2358, 2377
TaiI ACGT 4 cut(s) 479, 760, 1117, 1798
TaqI TCGA 1 cut(s) 1665
TaqII GACCGA 1 cut(s) 1946
TatI WGTACW 3 cut(s) 822, 1609, 2233
TfiI GAWTC 7 cut(s) 186, 671, 1733, 2082, 2129, 2180, 2351
Tru1I TTAA 6 cut(s) 303, 390, 767, 1155, 1554, 2413
Tru9I TTAA 6 cut(s) 303, 390, 767, 1155, 1554, 2413
TscAI CASTG 7 cut(s) 289, 325, 459, 655, 1336, 2068, 2361
TseFI GTSAC 2 cut(s) 891, 2186
TseI GCWGC 3 cut(s) 279, 1528, 1569
Tsp45I GTSAC 2 cut(s) 891, 2186
TspDTI ATGAA 8 cut(s) 153, 684, 1089, 1303, 1613, 1617, 1898, 2172
TspMI CCCGGG 1 cut(s) 210
TspRI CASTG 7 cut(s) 289, 325, 459, 655, 1336, 2068, 2361
Van91I CCANNNNNTGG 1 cut(s) 542
Vha464I CTTAAG 1 cut(s) 389
VpaK11BI GGWCC 6 cut(s) 626, 683, 869, 1186, 1929, 2164
XagI CCTNNNNNAGG 1 cut(s) 698
XapI RAATTY 1 cut(s) 1076
XcmI CCANNNNNNNNNTGG 1 cut(s) 1992
XmaI CCCGGG 1 cut(s) 210
ZrmI AGTACT 1 cut(s) 1611
Zsp2I ATGCAT 3 cut(s) 1390, 1446, 1996
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.