Prupe.4G032900_v2.0.a1

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000033
Physical Location & Seq
Reverse (-)
1528048 .. 1532216
4169 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G032900.1

Sequence Viewer

Length: 2517 bp
ATGGGTAAGAGAACTGAAACTTTTCATGCTTTTAATCCCTCCATCTTCATCCTATTCTTTTTCAATTGGTTTCTGTCACAGCATTATTGTGCAGAAGTTTATAACATAACTTCTTCACAACCATTAGCAGAGGGACAAACTCTTGTCTCTCCAGGCCACATTTTCGAATTGGGCTTCTTCAGTCCTAATAATTCTTCTAACAAGTATGTGGGGATATGGCACAAGACTATATTTCCCCGCAAAGTTGTTTGGGTGGCCAACAGAGAAAAGGCTCTTTCAGTTACAGACACATTGGCTAGTTTGACAATTAACAGCAATGGGAACCTGGAGCTTGTAGATGGGAAACAGAGTTGTATTTGGTCAACCAGTATTTCAGTGCCATCTAATGGTTCAGCTGCACTTCTTTTAGACAGTGGAAACTTTGTTGTCCAAGATGATATAGGAGCTCAATTATGGAGGAGCTTTGATTTTCCTGGTGACACACTTCTACCAATGATGTTGCTGGGATTCGATAACAAATCTGGAAAGAGGGATGTCTTGACTGCCTGGAAAAGTGAGAGTGATGGATCAACCGGGTTGTTCTCGGTTGGATTGGCACCACAGATCCCAACACAAATGTTCATTTGGATTAATGGATCAACTCCCTACTGGAGAAGTGGGCCATGGGACAAAACAAAGTTCCTCGGCATACCAGGAATGAAGGATGAATATGTAAGTGGATTAAATCTAGATGATAATGTGCAGCAGGGAACAAAGTATTTCTCTTTTTTCTTGAACAGAATTCTGGCATATATGGAAATCTCTTATAAAGGTACACTAAAGCTTATGTATTCCGAACATGGTGAGAACTGGAATCTTGACTTTGAGGCCCCAAAGAATCCATGTGACCATTATGGAATATGTGGACCTTTTGGGGTTTGCAAAGCTTCCGAGTCTCCAATCTGCAAGTGTTTGAAAGGGTTTAAACCCAAGTCACAAGAGGAATGGAGCAAAGGAAACAAGGCAGGGGGGTGTGTGAGGAAAACCAAATTGTTTTGTGGGAGTAACACAAGTAACTCAGTTCCTCTGAGAGGAAAACAAGATGGGTTTTTGAAAATGTCAAAGGTAAACCTACCAGATTTTCATGAGTATATTTCGAATTTGGGTGCTGAAGACTGCAAGGTACAGTGCGTAGGTAATTGTTCTTGCCTGGCTTATACACATATTAACAATATAGGGTGTTTGGTCTGGTCCAAAGACCTTATTGATATTCAAGAGTTTGCCTCTGGTGGAGACGATCTTTTTATTCGCCTAGCACATGCAGAATTAGGTGAAAGAAAGCAAATAAAGATAATGGTCAGCCTCATAGCTGTTTGTTTTATCAGTATCTTGGCTGGCATAGTGTTTAGCTTGCACAGATTGCGATCTAACCAAAAGAGAAACGTCAAAGTAACACCTAAGGACTCTGAAATGGCTGATATGATTGAGACTTCAAGAGACGCTCTTCTTCATGAATATATAAGAAAACATGATCCATCAGAGCTAGTAATCTATGATTTTGATACCATATTAATTGCTACGAGCAATTTCAGCATCACAAACAAACTCGGAGAAGGAGGATTCGGGCCTGTATATAGGGGTAAGCTACAAGAAGGGAAGGAAATAGCAGTAAAAAGACTATCTAGTAGCTCAGTACAAGGCATAGAAGAGTTCAAGAATGAGATGCTGTTGATCTCCAAACTCCAACATAAGAATCTTGTAAGGCTCATGGGTTGCTGCATTAAAGATGATGAGAAGCTACTAATTTATGAGTTCATGCCAAACAAAAGCTTGGATACTCTTTTGTTCAGTCCAATGAGAAGAGCAGAGCTTGATTGGGCTAAACGCTTCAATATTATTCAAGGTGTTGCTAGAGGACTTCTTTATCTCCACTATGATTCATGTTTGAAGGTAATACATAGAGATTTGAAGGTAAGTAATATTCTGTTGGATGAGAAGATGAGCCCAAAAATTTCGGATTTTGGACTGGCACGTATCTTTGAAGGGACACAGAATCTAGCAAACACTCAGAAGGTTGTGGGAACTCTTGGCTATATGTCTCCGGAGTATGCCATGCGCGGGATATTTTCTGAAAAATCCGATATATATAGCTTTGGAGTCTTGCTGTTGGAGATTGTTGGTGGCAGGAAAAATACCAGCTTCTATTACCATGACCAACAGCTAGGCTTCATAGATTATGCATGGCACTCATGGAATGAAGGCAGGGGATTGGACTTGGTTGATGAAGTTTTGGCAGATTCATATTCGTCAACAGAAGTGATGAGATGTGTGCACATTGGGCTTCTTTGTGTACAGGACAATGCTGCAGATAGGCCAACCATGCCAGATGTAGTTTTCATGCTGAGTAGGGAGACAGATCGCCCACAACCTAAGCGGCCTATTTTTACTTCCCAAAGCTCAGTCTCTGATCCACAACCACAGTTTGACAATATTTGCTCTGCAAATGAAGATACCATAACACTTCTTCAAGGACGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

839

Amino Acids

94.16

Weight (kDa)

6.54

Isoelectric Point (pI)

43.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 102, 807
AccB1I GGYRCC 1 cut(s) 595
AccB7I CCANNNNNTGG 1 cut(s) 386
AccII CGCG 1 cut(s) 2097
AccIII TCCGGA 1 cut(s) 2080
AciI CCGC 3 cut(s) 238, 2097, 2413
AclWI GGATC 5 cut(s) 574, 598, 643, 1505, 2441
AcoI YGGCCR 1 cut(s) 255
AcsI RAATTY 3 cut(s) 780, 1138, 1989
AcuI CTGAAG 2 cut(s) 163, 1170
AfaI GTAC 4 cut(s) 814, 1164, 1674, 2331
AfiI CCNNNNNNNGG 3 cut(s) 386, 1070, 2097
AjnI CCWGG 6 cut(s) 151, 324, 472, 545, 691, 1188
Alw21I GWGCWC 2 cut(s) 448, 2313
Alw26I GTCTC 8 cut(s) 151, 939, 1266, 1460, 1470, 2082, 2384, 2446
Alw44I GTGCAC 1 cut(s) 2309
AlwI GGATC 5 cut(s) 574, 598, 643, 1505, 2441
AlwNI CAGNNNCTG 1 cut(s) 2444
Aor13HI TCCGGA 1 cut(s) 2080
AoxI GGCC 7 cut(s) 154, 255, 659, 867, 1604, 2351, 2414
ApaLI GTGCAC 1 cut(s) 2309
ApeKI GCWGC 4 cut(s) 395, 742, 1755, 2342
ApoI RAATTY 3 cut(s) 780, 1138, 1989
AseI ATTAAT 2 cut(s) 630, 1550
Asp700I GAANNNNTTC 1 cut(s) 21
AspLEI GCGC 1 cut(s) 2097
AspS9I GGNCC 5 cut(s) 659, 868, 905, 1230, 1604
AsuC2I CCSGG 1 cut(s) 574
AsuHPI GGTGA 3 cut(s) 488, 854, 1322
AsuII TTCGAA 2 cut(s) 165, 1136
AvaII GGWCC 2 cut(s) 905, 1230
AxyI CCTNAGG 1 cut(s) 1437
BaeGI GKGCMC 1 cut(s) 2313
BalI TGGCCA 1 cut(s) 257
BanI GGYRCC 1 cut(s) 595
BanII GRGCYC 2 cut(s) 448, 1985
BbsI GAAGAC 1 cut(s) 1158
Bbv12I GWGCWC 2 cut(s) 448, 2313
BbvI GCAGC 4 cut(s) 382, 754, 1742, 2329
BccI CCATC 6 cut(s) 50, 332, 388, 557, 1076, 1522
BciT130I CCWGG 6 cut(s) 153, 326, 474, 547, 693, 1190
BciVI GTATCC 1 cut(s) 1807
BcnI CCSGG 1 cut(s) 574
BcoDI GTCTC 8 cut(s) 151, 939, 1266, 1460, 1470, 2082, 2384, 2446
BfaI CTAG 8 cut(s) 297, 728, 1292, 1523, 1662, 1890, 2036, 2201
BfmI CTRYAG 1 cut(s) 2343
BfuI GTATCC 1 cut(s) 1807
BisI GCNGC 5 cut(s) 396, 743, 1756, 2343, 2414
BlsI GCNGC 5 cut(s) 397, 744, 1757, 2344, 2415
Bme1390I CCNGG 7 cut(s) 153, 326, 474, 547, 574, 693, 1190
Bme18I GGWCC 2 cut(s) 905, 1230
BmgT120I GGNCC 5 cut(s) 659, 868, 905, 1230, 1604
BmiI GGNNCC 3 cut(s) 323, 597, 870
BmrFI CCNGG 7 cut(s) 153, 326, 474, 547, 574, 693, 1190
BmsI GCATC 2 cut(s) 1581, 1692
BpiI GAAGAC 1 cut(s) 1158
BplI GAGNNNNNCTC 2 cut(s) 1247, 1279
BpmI CTGGAG 3 cut(s) 135, 347, 670
Bpu10I CCTNAGC 1 cut(s) 2409
Bpu14I TTCGAA 2 cut(s) 165, 1136
BpuMI CCSGG 1 cut(s) 574
BsaAI YACGTR 1 cut(s) 2012
BsaBI GATNNNNATC 1 cut(s) 1402
BsaJI CCNNGG 2 cut(s) 662, 682
BsaWI WCCGGW 1 cut(s) 2080
Bsc4I CCNNNNNNNGG 3 cut(s) 386, 1070, 2097
Bse1I ACTGG 4 cut(s) 366, 653, 854, 2010
Bse21I CCTNAGG 1 cut(s) 1437
Bse3DI GCAATG 1 cut(s) 322
Bse8I GATNNNNATC 1 cut(s) 1402
BseAI TCCGGA 1 cut(s) 2080
BseBI CCWGG 6 cut(s) 153, 326, 474, 547, 693, 1190
BseDI CCNNGG 2 cut(s) 662, 682
BseGI GGATG 4 cut(s) 48, 538, 709, 1975
BseJI GATNNNNATC 1 cut(s) 1402
BseLI CCNNNNNNNGG 3 cut(s) 386, 1070, 2097
BseMI GCAATG 1 cut(s) 322
BseMII CTCAG 6 cut(s) 1058, 1071, 1683, 2060, 2372, 2451
BseNI ACTGG 4 cut(s) 366, 653, 854, 2010
BseRI GAGGAG 1 cut(s) 472
BseSI GKGCMC 1 cut(s) 2313
BseXI GCAGC 4 cut(s) 382, 754, 1742, 2329
BseYI CCCAGC 1 cut(s) 502
BsgI GTGCAG 3 cut(s) 111, 381, 761
Bsh1236I CGCG 1 cut(s) 2097
BshFI GGCC 7 cut(s) 156, 257, 661, 869, 1606, 2353, 2416
BshNI GGYRCC 1 cut(s) 595
BsiHKAI GWGCWC 2 cut(s) 448, 2313
BsiSI CCGG 2 cut(s) 573, 2081
BslFI GGGAC 3 cut(s) 147, 680, 2038
BslI CCNNNNNNNGG 3 cut(s) 386, 1070, 2097
BsmAI GTCTC 8 cut(s) 151, 939, 1266, 1460, 1470, 2082, 2384, 2446
BsmBI CGTCTC 2 cut(s) 1266, 1470
BsmFI GGGAC 3 cut(s) 147, 680, 2038
BsnI GGCC 7 cut(s) 156, 257, 661, 869, 1606, 2353, 2416
Bsp119I TTCGAA 2 cut(s) 165, 1136
Bsp1286I GDGCHC 3 cut(s) 448, 1985, 2313
Bsp13I TCCGGA 1 cut(s) 2080
Bsp1407I TGTACA 1 cut(s) 2329
Bsp143I GATC 9 cut(s) 566, 603, 635, 1276, 1403, 1510, 1710, 2395, 2446
Bsp19I CCATGG 1 cut(s) 662
BspACI CCGC 3 cut(s) 238, 2097, 2413
BspANI GGCC 7 cut(s) 156, 257, 661, 869, 1606, 2353, 2416
BspCNI CTCAG 6 cut(s) 1059, 1070, 1682, 2059, 2373, 2450
BspEI TCCGGA 1 cut(s) 2080
BspFNI CGCG 1 cut(s) 2097
BspHI TCATGA 2 cut(s) 1123, 1489
BspLI GGNNCC 3 cut(s) 323, 597, 870
BspMAI CTGCAG 1 cut(s) 2347
BspPI GGATC 5 cut(s) 574, 598, 643, 1505, 2441
BspQI GCTCTTC 2 cut(s) 1488, 1834
BspT104I TTCGAA 2 cut(s) 165, 1136
BspT107I GGYRCC 1 cut(s) 595
BsrDI GCAATG 1 cut(s) 322
BsrGI TGTACA 1 cut(s) 2329
BsrI ACTGG 4 cut(s) 366, 653, 854, 2010
BssECI CCNNGG 2 cut(s) 662, 682
BssMI GATC 9 cut(s) 566, 603, 635, 1276, 1403, 1510, 1710, 2395, 2446
BssT1I CCWWGG 1 cut(s) 662
Bst2UI CCWGG 6 cut(s) 153, 326, 474, 547, 693, 1190
Bst4CI ACNGT 3 cut(s) 413, 1167, 2460
Bst6I CTCTTC 3 cut(s) 1488, 1680, 1834
BstAPI GCANNNNNTGC 1 cut(s) 1399
BstAUI TGTACA 1 cut(s) 2329
BstBAI YACGTR 1 cut(s) 2012
BstBI TTCGAA 2 cut(s) 165, 1136
BstC8I GCNNGC 2 cut(s) 1375, 1391
BstDEI CTNAG 8 cut(s) 1057, 1067, 1437, 1669, 2046, 2381, 2409, 2437
BstDSI CCRYGG 1 cut(s) 662
BstENI CCTNNNNNAGG 1 cut(s) 1068
BstF5I GGATG 4 cut(s) 48, 538, 709, 1975
BstFNI CGCG 1 cut(s) 2097
BstHHI GCGC 1 cut(s) 2097
BstKTI GATC 9 cut(s) 569, 606, 638, 1279, 1406, 1513, 1713, 2398, 2449
BstMAI GTCTC 8 cut(s) 151, 939, 1266, 1460, 1470, 2082, 2384, 2446
BstMBI GATC 9 cut(s) 566, 603, 635, 1276, 1403, 1510, 1710, 2395, 2446
BstMWI GCNNNNNNNGC 4 cut(s) 1399, 1569, 2317, 2359
BstNI CCWGG 6 cut(s) 153, 326, 474, 547, 693, 1190
BstNSI RCATGY 1 cut(s) 1301
BstSCI CCNGG 7 cut(s) 151, 324, 472, 545, 572, 691, 1188
BstSFI CTRYAG 1 cut(s) 2343
BstSLI GKGCMC 1 cut(s) 2313
BstUI CGCG 1 cut(s) 2097
BstV1I GCAGC 4 cut(s) 382, 754, 1742, 2329
BstV2I GAAGAC 1 cut(s) 1158
BstX2I RGATCY 1 cut(s) 603
BstYI RGATCY 1 cut(s) 603
Bsu36I CCTNAGG 1 cut(s) 1437
BsuI GTATCC 1 cut(s) 1807
BsuRI GGCC 7 cut(s) 156, 257, 661, 869, 1606, 2353, 2416
BtgI CCRYGG 1 cut(s) 662
BtsCI GGATG 4 cut(s) 48, 538, 709, 1975
BtsIMutI CAGTG 3 cut(s) 381, 418, 1172
Cac8I GCNNGC 2 cut(s) 1375, 1391
CaiI CAGNNNCTG 1 cut(s) 2444
CciI TCATGA 2 cut(s) 1123, 1489
CfoI GCGC 1 cut(s) 2097
Cfr13I GGNCC 5 cut(s) 659, 868, 905, 1230, 1604
CseI GACGC 1 cut(s) 1487
Csp6I GTAC 4 cut(s) 813, 1163, 1673, 2330
CviQI GTAC 4 cut(s) 813, 1163, 1673, 2330
DdeI CTNAG 8 cut(s) 1057, 1067, 1437, 1669, 2046, 2381, 2409, 2437
DpnI GATC 9 cut(s) 568, 605, 637, 1278, 1405, 1512, 1712, 2397, 2448
DpnII GATC 9 cut(s) 566, 603, 635, 1276, 1403, 1510, 1710, 2395, 2446
DraI TTTAAA 1 cut(s) 964
EaeI YGGCCR 1 cut(s) 255
Eam1104I CTCTTC 3 cut(s) 1488, 1680, 1834
EarI CTCTTC 3 cut(s) 1488, 1680, 1834
Ecl136II GAGCTC 1 cut(s) 446
Eco130I CCWWGG 1 cut(s) 662
Eco24I GRGCYC 2 cut(s) 448, 1985
Eco47I GGWCC 2 cut(s) 905, 1230
Eco53kI GAGCTC 1 cut(s) 446
Eco57I CTGAAG 2 cut(s) 163, 1170
Eco81I CCTNAGG 1 cut(s) 1437
EcoICRI GAGCTC 1 cut(s) 446
EcoNI CCTNNNNNAGG 1 cut(s) 1068
EcoO109I RGGNCCY 1 cut(s) 868
EcoRI GAATTC 1 cut(s) 780
EcoRII CCWGG 6 cut(s) 151, 324, 472, 545, 691, 1188
EcoT14I CCWWGG 1 cut(s) 662
EcoT22I ATGCAT 1 cut(s) 2221
EcoT38I GRGCYC 2 cut(s) 448, 1985
ErhI CCWWGG 1 cut(s) 662
Esp3I CGTCTC 2 cut(s) 1266, 1470
FaqI GGGAC 3 cut(s) 147, 680, 2038
FauI CCCGC 2 cut(s) 245, 2090
Fnu4HI GCNGC 5 cut(s) 396, 743, 1756, 2343, 2414
FokI GGATG 4 cut(s) 35, 545, 716, 1982
FriOI GRGCYC 2 cut(s) 448, 1985
Fsp4HI GCNGC 5 cut(s) 396, 743, 1756, 2343, 2414
FspBI CTAG 8 cut(s) 297, 728, 1292, 1523, 1662, 1890, 2036, 2201
GlaI GCGC 1 cut(s) 2096
GluI GCNGC 5 cut(s) 396, 743, 1756, 2343, 2414
GsaI CCCAGC 1 cut(s) 506
GsuI CTGGAG 3 cut(s) 135, 347, 670
HaeIII GGCC 7 cut(s) 156, 257, 661, 869, 1606, 2353, 2416
HapII CCGG 2 cut(s) 573, 2081
HgaI GACGC 1 cut(s) 1487
HhaI GCGC 1 cut(s) 2097
Hin6I GCGC 1 cut(s) 2095
HinP1I GCGC 1 cut(s) 2095
HincII GTYRAC 2 cut(s) 363, 2289
HindII GTYRAC 2 cut(s) 363, 2289
HindIII AAGCTT 3 cut(s) 821, 924, 1807
HpaII CCGG 2 cut(s) 573, 2081
HphI GGTGA 3 cut(s) 488, 854, 1322
Hpy166II GTNNAC 7 cut(s) 363, 815, 905, 1108, 2289, 2311, 2330
Hpy8I GTNNAC 7 cut(s) 363, 815, 905, 1108, 2289, 2311, 2330
HpyAV CCTTC 9 cut(s) 694, 1586, 1625, 1630, 1921, 1942, 2015, 2044, 2231
HpyCH4III ACNGT 3 cut(s) 413, 1167, 2460
HpyCH4IV ACGT 2 cut(s) 1422, 2011
HpyF10VI GCNNNNNNNGC 4 cut(s) 1399, 1569, 2317, 2359
HpyF3I CTNAG 8 cut(s) 1057, 1067, 1437, 1669, 2046, 2381, 2409, 2437
HpySE526I ACGT 2 cut(s) 1422, 2011
HspAI GCGC 1 cut(s) 2095
Kpn2I TCCGGA 1 cut(s) 2080
Kzo9I GATC 9 cut(s) 566, 603, 635, 1276, 1403, 1510, 1710, 2395, 2446
LguI GCTCTTC 2 cut(s) 1488, 1834
LmnI GCTCC 4 cut(s) 328, 443, 459, 987
Lsp1109I GCAGC 4 cut(s) 382, 754, 1742, 2329
LweI GCATC 2 cut(s) 1581, 1692
MaeI CTAG 8 cut(s) 297, 728, 1292, 1523, 1662, 1890, 2036, 2201
MaeII ACGT 2 cut(s) 1422, 2011
MaeIII GTNAC 8 cut(s) 75, 280, 476, 884, 972, 1043, 1052, 1429
MalI GATC 9 cut(s) 568, 605, 637, 1278, 1405, 1512, 1712, 2397, 2448
MboI GATC 9 cut(s) 566, 603, 635, 1276, 1403, 1510, 1710, 2395, 2446
MfeI CAATTG 1 cut(s) 64
MflI RGATCY 1 cut(s) 603
MhlI GDGCHC 3 cut(s) 448, 1985, 2313
MlsI TGGCCA 1 cut(s) 257
MluNI TGGCCA 1 cut(s) 257
MlyI GAGTC 3 cut(s) 941, 1436, 2145
MmeI TCCRAC 4 cut(s) 568, 1747, 1947, 2127
Mox20I TGGCCA 1 cut(s) 257
Mph1103I ATGCAT 1 cut(s) 2221
MroI TCCGGA 1 cut(s) 2080
MroXI GAANNNNTTC 1 cut(s) 21
MscI TGGCCA 1 cut(s) 257
MseI TTAA 8 cut(s) 33, 309, 630, 722, 963, 1206, 1550, 1761
MslI CAYNNNNRTG 1 cut(s) 87
Msp20I TGGCCA 1 cut(s) 257
MspA1I CMGCKG 1 cut(s) 395
MspI CCGG 2 cut(s) 573, 2081
MspR9I CCNGG 7 cut(s) 153, 326, 474, 547, 574, 693, 1190
MssI GTTTAAAC 1 cut(s) 964
MunI CAATTG 1 cut(s) 64
MvaI CCWGG 6 cut(s) 153, 326, 474, 547, 693, 1190
MvnI CGCG 1 cut(s) 2097
MwoI GCNNNNNNNGC 4 cut(s) 1399, 1569, 2317, 2359
NciI CCSGG 1 cut(s) 574
NcoI CCATGG 1 cut(s) 662
NdeII GATC 9 cut(s) 566, 603, 635, 1276, 1403, 1510, 1710, 2395, 2446
NlaIV GGNNCC 3 cut(s) 323, 597, 870
NmeAIII GCCGAG 1 cut(s) 663
NmuCI GTSAC 4 cut(s) 75, 476, 884, 972
NsiI ATGCAT 1 cut(s) 2221
NspI RCATGY 1 cut(s) 1301
NspV TTCGAA 2 cut(s) 165, 1136
PagI TCATGA 2 cut(s) 1123, 1489
PciSI GCTCTTC 2 cut(s) 1488, 1834
PdmI GAANNNNTTC 1 cut(s) 21
PfeI GAWTC 8 cut(s) 507, 853, 877, 1599, 1732, 1916, 2032, 2276
PflMI CCANNNNNTGG 1 cut(s) 386
PkrI GCNGC 5 cut(s) 397, 744, 1757, 2344, 2415
PleI GAGTC 3 cut(s) 940, 1436, 2144
PmeI GTTTAAAC 1 cut(s) 964
PpsI GAGTC 3 cut(s) 940, 1436, 2144
Ppu21I YACGTR 1 cut(s) 2012
PshBI ATTAAT 2 cut(s) 630, 1550
PsiI TTATAA 2 cut(s) 102, 807
Psp124BI GAGCTC 1 cut(s) 448
Psp6I CCWGG 6 cut(s) 151, 324, 472, 545, 691, 1188
PspFI CCCAGC 1 cut(s) 502
PspGI CCWGG 6 cut(s) 151, 324, 472, 545, 691, 1188
PspN4I GGNNCC 3 cut(s) 323, 597, 870
PspPI GGNCC 5 cut(s) 659, 868, 905, 1230, 1604
PstI CTGCAG 1 cut(s) 2347
PstNI CAGNNNCTG 1 cut(s) 2444
PsuI RGATCY 1 cut(s) 603
PvuII CAGCTG 1 cut(s) 395
RsaI GTAC 4 cut(s) 814, 1164, 1674, 2331
RsaNI GTAC 4 cut(s) 813, 1163, 1673, 2330
RseI CAYNNNNRTG 1 cut(s) 87
SacI GAGCTC 1 cut(s) 448
SapI GCTCTTC 2 cut(s) 1488, 1834
SaqAI TTAA 8 cut(s) 33, 309, 630, 722, 963, 1206, 1550, 1761
SatI GCNGC 5 cut(s) 396, 743, 1756, 2343, 2414
Sau3AI GATC 9 cut(s) 566, 603, 635, 1276, 1403, 1510, 1710, 2395, 2446
Sau96I GGNCC 5 cut(s) 659, 868, 905, 1230, 1604
SchI GAGTC 3 cut(s) 941, 1436, 2145
ScrFI CCNGG 7 cut(s) 153, 326, 474, 547, 574, 693, 1190
SduI GDGCHC 3 cut(s) 448, 1985, 2313
SfaNI GCATC 2 cut(s) 1581, 1692
SfcI CTRYAG 1 cut(s) 2343
SfuI TTCGAA 2 cut(s) 165, 1136
SinI GGWCC 2 cut(s) 905, 1230
SmiMI CAYNNNNRTG 1 cut(s) 87
SsiI CCGC 3 cut(s) 238, 2097, 2413
SspI AATATT 3 cut(s) 1873, 1960, 2470
SspMI CTAG 8 cut(s) 297, 728, 1292, 1523, 1662, 1890, 2036, 2201
SstI GAGCTC 1 cut(s) 448
StyD4I CCNGG 7 cut(s) 151, 324, 472, 545, 572, 691, 1188
StyI CCWWGG 1 cut(s) 662
TaaI ACNGT 3 cut(s) 413, 1167, 2460
TaiI ACGT 2 cut(s) 1425, 2014
TaqI TCGA 3 cut(s) 165, 510, 1136
TatI WGTACW 2 cut(s) 1672, 2329
TauI GCSGC 1 cut(s) 2416
TfiI GAWTC 8 cut(s) 507, 853, 877, 1599, 1732, 1916, 2032, 2276
Tru1I TTAA 8 cut(s) 33, 309, 630, 722, 963, 1206, 1550, 1761
Tru9I TTAA 8 cut(s) 33, 309, 630, 722, 963, 1206, 1550, 1761
TscAI CASTG 3 cut(s) 381, 418, 1172
TseFI GTSAC 4 cut(s) 75, 476, 884, 972
TseI GCWGC 4 cut(s) 395, 742, 1755, 2342
Tsp45I GTSAC 4 cut(s) 75, 476, 884, 972
TspRI CASTG 3 cut(s) 381, 418, 1172
Van91I CCANNNNNTGG 1 cut(s) 386
VneI GTGCAC 1 cut(s) 2309
VpaK11BI GGWCC 2 cut(s) 905, 1230
VspI ATTAAT 2 cut(s) 630, 1550
XagI CCTNNNNNAGG 1 cut(s) 1068
XapI RAATTY 3 cut(s) 780, 1138, 1989
XbaI TCTAGA 1 cut(s) 727
XceI RCATGY 1 cut(s) 1301
XmnI GAANNNNTTC 1 cut(s) 21
XspI CTAG 8 cut(s) 297, 728, 1292, 1523, 1662, 1890, 2036, 2201
Zsp2I ATGCAT 1 cut(s) 2221
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.