RchiOBHm_Chr1g0319181

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
6862494 .. 6863041
548 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54943

Sequence Viewer

Length: 417 bp
ATGTCTCCAGAGTATGCCATTGGTGGAATATTTTCTGAAAAATCTGATGTCTATAGTTTCGGGGTTTTGGAATTGGAGATTATTAGCAGCAAGAAGAATAACAACTTTTTTTTAGATAATCAACAATTAGGCTTTCTAGCCCATGCATGGAACTTGTGGTATGAAGGTAAGGGATTGGAATTGGTAGATGAAGTGTTGGGTGATTCATATTCCTCATCAGAAGTATTGAAATGTGTGCACATTGGGCTTCTTTGTGTACAAGATAATGCTGCGGATAGGCCAACCATGAAAGATATTGTTTTAATGCTAAATAGTGAGAAAGATTGTCCACAACCTAAGAGGCCTAAATTCACTATGCAAAACTCTTTTTCTCATCCTCAACCGCAGTATATTCAGACTAATTCCTCCATGAATTAA

Protein Analysis

138

Amino Acids

15.6

Weight (kDa)

4.92

Isoelectric Point (pI)

42.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 1 - 101 2e-06 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 272, 383
AcsI RAATTY 1 cut(s) 347
AfaI GTAC 1 cut(s) 258
AfiI CCNNNNNNNGG 1 cut(s) 147
AgsI TTSAA 1 cut(s) 229
Alw21I GWGCWC 1 cut(s) 240
Alw26I GTCTC 1 cut(s) 9
Alw44I GTGCAC 1 cut(s) 236
AoxI GGCC 2 cut(s) 278, 341
ApaLI GTGCAC 1 cut(s) 236
ApeKI GCWGC 2 cut(s) 87, 269
ApoI RAATTY 1 cut(s) 347
Asp700I GAANNNNTTC 1 cut(s) 31
AsuHPI GGTGA 1 cut(s) 212
BaeGI GKGCMC 1 cut(s) 240
Bbv12I GWGCWC 1 cut(s) 240
BbvI GCAGC 2 cut(s) 99, 256
BcoDI GTCTC 1 cut(s) 9
BfaI CTAG 1 cut(s) 137
BfmI CTRYAG 1 cut(s) 52
BisI GCNGC 2 cut(s) 88, 270
BlsI GCNGC 2 cut(s) 89, 271
Bsc4I CCNNNNNNNGG 1 cut(s) 147
BseGI GGATG 1 cut(s) 373
BseLI CCNNNNNNNGG 1 cut(s) 147
BseSI GKGCMC 1 cut(s) 240
BseXI GCAGC 2 cut(s) 99, 256
BshFI GGCC 2 cut(s) 280, 343
BsiHKAI GWGCWC 1 cut(s) 240
BslI CCNNNNNNNGG 1 cut(s) 147
BsmAI GTCTC 1 cut(s) 9
BsnI GGCC 2 cut(s) 280, 343
Bsp1286I GDGCHC 1 cut(s) 240
Bsp1407I TGTACA 1 cut(s) 256
BspACI CCGC 2 cut(s) 272, 383
BspANI GGCC 2 cut(s) 280, 343
BsrGI TGTACA 1 cut(s) 256
BstAUI TGTACA 1 cut(s) 256
BstDEI CTNAG 1 cut(s) 336
BstF5I GGATG 1 cut(s) 373
BstMAI GTCTC 1 cut(s) 9
BstMWI GCNNNNNNNGC 1 cut(s) 244
BstSFI CTRYAG 1 cut(s) 52
BstSLI GKGCMC 1 cut(s) 240
BstV1I GCAGC 2 cut(s) 99, 256
BsuRI GGCC 2 cut(s) 280, 343
BtsCI GGATG 1 cut(s) 373
Csp6I GTAC 1 cut(s) 257
CviAII CATG 4 cut(s) 143, 147, 286, 409
CviJI RGCY 5 cut(s) 132, 140, 247, 280, 343
CviKI_1 RGCY 5 cut(s) 132, 140, 247, 280, 343
CviQI GTAC 1 cut(s) 257
DdeI CTNAG 1 cut(s) 336
Eco147I AGGCCT 1 cut(s) 343
EcoT22I ATGCAT 1 cut(s) 148
FaeI CATG 4 cut(s) 146, 150, 289, 412
FatI CATG 4 cut(s) 142, 146, 285, 408
Fnu4HI GCNGC 2 cut(s) 88, 270
FokI GGATG 1 cut(s) 360
Fsp4HI GCNGC 2 cut(s) 88, 270
FspBI CTAG 1 cut(s) 137
GluI GCNGC 2 cut(s) 88, 270
HaeIII GGCC 2 cut(s) 280, 343
Hin1II CATG 4 cut(s) 146, 150, 289, 412
HinfI GANTC 1 cut(s) 203
HphI GGTGA 1 cut(s) 212
Hpy166II GTNNAC 3 cut(s) 238, 257, 329
Hpy188I TCNGA 4 cut(s) 37, 46, 220, 396
Hpy188III TCNNGA 1 cut(s) 8
Hpy8I GTNNAC 3 cut(s) 238, 257, 329
HpyAV CCTTC 1 cut(s) 158
HpyCH4V TGCA 3 cut(s) 146, 238, 358
HpyF10VI GCNNNNNNNGC 1 cut(s) 244
HpyF3I CTNAG 1 cut(s) 336
Hsp92II CATG 4 cut(s) 146, 150, 289, 412
LpnPI CCDG 1 cut(s) 21
Lsp1109I GCAGC 2 cut(s) 99, 256
MaeI CTAG 1 cut(s) 137
MboII GAAGA 1 cut(s) 106
MhlI GDGCHC 1 cut(s) 240
MluCI AATT 6 cut(s) 71, 125, 179, 347, 400, 412
MnlI CCTC 4 cut(s) 223, 333, 387, 415
Mph1103I ATGCAT 1 cut(s) 148
MroXI GAANNNNTTC 1 cut(s) 31
MseI TTAA 2 cut(s) 302, 415
MwoI GCNNNNNNNGC 1 cut(s) 244
NlaIII CATG 4 cut(s) 146, 150, 289, 412
NsiI ATGCAT 1 cut(s) 148
PceI AGGCCT 1 cut(s) 343
PdmI GAANNNNTTC 1 cut(s) 31
PfeI GAWTC 1 cut(s) 203
PkrI GCNGC 2 cut(s) 89, 271
RsaI GTAC 1 cut(s) 258
RsaNI GTAC 1 cut(s) 257
SaqAI TTAA 2 cut(s) 302, 415
SatI GCNGC 2 cut(s) 88, 270
SduI GDGCHC 1 cut(s) 240
SetI ASST 2 cut(s) 169, 337
SfcI CTRYAG 1 cut(s) 52
SgeI CNNG 9 cut(s) 20, 73, 103, 149, 155, 159, 166, 272, 298
Sse9I AATT 6 cut(s) 71, 125, 179, 347, 400, 412
SseBI AGGCCT 1 cut(s) 343
SsiI CCGC 2 cut(s) 272, 383
SspI AATATT 1 cut(s) 30
SspMI CTAG 1 cut(s) 137
StuI AGGCCT 1 cut(s) 343
TasI AATT 6 cut(s) 71, 125, 179, 347, 400, 412
TatI WGTACW 1 cut(s) 256
TfiI GAWTC 1 cut(s) 203
Tru1I TTAA 2 cut(s) 302, 415
Tru9I TTAA 2 cut(s) 302, 415
TseI GCWGC 2 cut(s) 87, 269
TspDTI ATGAA 4 cut(s) 177, 195, 204, 302
VneI GTGCAC 1 cut(s) 236
XapI RAATTY 1 cut(s) 347
XmnI GAANNNNTTC 1 cut(s) 31
XspI CTAG 1 cut(s) 137
Zsp2I ATGCAT 1 cut(s) 148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.