Rroxscaffold_1G00070440

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000033
Physical Location & Seq
Forward (+)
91353462 .. 91362691
9230 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00070440.1

Sequence Viewer

Length: 3627 bp
ATGGTGAGGTTGAAAGTACCAGACTCTCATGAATTTGTTGTTACATCTTTGGATGATGAAAACTCGGCTGACGACTGCAAGATACGGTGCCTAAAGAATTGTTCTTGCCTGGCTTATGCATTTGTTAATAACATAGGTTGTTTGGTCTGGTCCAAAGACCTTCTTGATGTACAGGAGTTTTCCTCTGGTGGAGTTGATCTTTATATTCGCCTCGCACATTCAGAACTAGGTAAAGGAAAGCCGATAAAATTAATTGCCAGCCTTACGGCTATTTGTTCTGCCATTACTTTGGTTGCCATAGTGTTCATTTGGCGCAGGCTGCGAACTAAGCACAAGGAATTAGGACATGTCATATTTACACCACAGCACTTTGAACCGACAGATACAATTCAGACTTCAAGAAATGTTCTTCGAGAATACATGGGAAAGCATGATCTTTCAGAGCTATTGTTGTATGATTTTGATACCATTTTAATTGCTACAAACAATTTCAGCATGACAAACAAACTGGGGCAAGGAGGCTTTGGTCCAGTCTATAAGGGTATGCTACCAGAAGGGAAGGAAATTGCTGTAAAAAGACTATCTAGTAGCTCCGGACAAGGCATTGAAGAGTTCAAGAATGAGATGTTGTTGATCTCCAATCTTCAGCACAAAAATCTAGTTAGAATCATGGGTTGCTGCATTCAAGAAGAGGAGAAGTTACTGATTTTGGAGTTCATGCCAAACAAAAGCTTGGATACTTTTCTATTTGATCCAACCAGAAAAGCAATGCTTGATTGGAATAGCCGATTTAATATTATTCAAGGTGTTGCAAGAGGGCTTCTTTACCTCCATCATGATTCCTATTTGAAGATAATTCATAGAGATTTGAAAGTTAGCAACATTCTCCTGGATGAGAAAATGAACCCAAAAATTTCAGACTTTGGATTGGCACGAATAGTTCAAGGGACACAGAATCTAGAAAATACTCAGAAGGTTGTGGGAACTCGTGGATATATGTCTCCGGAGTATGCCATGGGCGGGATATTTTCTGAAAAATCTGATGTCTACAGCTTTGGGGTCTTGATATTGGAGATAATTAGCAGCAAGAAGAATACAAGCTTCTGTGTCCAAGACCAACAGCTAGGATTTCTAGCTTATGCATGGGAGTTATGGAATGAAGGCAGGGGAATGGAATTGTTAGATAAAGTATTGGATGATTCATATTCTTCATCAGAAGTAATGAGATGCGTTCATATTGGGCTTCTTTGTGTACAAGATAATGCCGTGGATAGGCCAACCATGCCTGATGTAGTTTTGATGCTAAGTAGTGACAAAGATGGTCCAGAACCTAAGCAACCTGTATTCACTATCCAAAACTCAGTGTTTCATCCTCAACCACAGTATGAAAATACTTCCTCCACAAATCAAGCTTCCATTACAGTGATTGAAGGACGTTTGCTTCTATCACAATATGGTGCTGAAGTTTATAGCATAACTTCTTCACAGCCATTAGCACCGGGACAAATTCTTGTCTCCCCTGGTCACCTTTTTGAATTGGGCTTCTTCGATGGTAATAAGTATGTGGGGATATGGCACAAGAATATATCTCCTCGTAAAGTTGTATGGGTGGCCAACAGAGAAAAGCGTCTTACAGACACCTTGTCAAGTTTGAGAATCGGTAGCAATGGGAATCTGGAGCTTGTAGATGGGAAACAAAATCCGGTCTGGTCAACTAATATTACTACTCGGGTGTCTTCATCTAGTAGTACTTCAGCAGCTGCTGTTCTGCTAGAAAGTGGAGAATTAGTTGTCAAAAACAGTATGGGAGATGTTGTGTGGCAGAGCTTTGATTATCCTAGCGACACAATCCTTCCAAGCATGTTGGTTGGATTTGATAGCAAATCTGGAAAGAGAAAGTTCTTGACTTCCTGGAAAGGTGATAATGATCCATCAGCAGGGATGTTCTTGGTTGGACTTGAATCACAGACACCAACACAAGTGTTTATTTGGATTAATAATGGATCGACTCCCTATTGGAGAAGTGGTCCATGGGATAGAACAAAGTTCATTGGCCTACCAGAAATGGATCATCAATATCAAAGTGGATTTAAACTTGACGATGATCCCATACTGGGGACAAAGTATTTCTCTTATACTTTACTTGACAGTACTATCTCATATTTTGAAATCTCTTCCAAAGGAATATTGAACTTTATGCTTTCAGAAAATGGCTCCAACTGGGATCGTAACTGGGGGGCACCTGATAGCCCATGCGACAGATATGGAGTTTGTGGACCTTTTGGGGTTTGTACAACTTCTGAATCTCCAATGTGCAAGTGTTTGGAAAAGTTTGTACCCAAGTCAGCTGAGGAATGGAGCAAACAAAACTGGACAGGAGGGTGTGTGAGGCAAACCAAATTGTTCTCTGACAGTAACACAAATAAGTCGGTCTCATCCAGAGGAAGCGATGGTTTTCAGAAGAGGGTAAGGTTGAAGGTACCAGATTTTCACGAATATATCACATCTTTGGAATCTGAAGACTGCAAGATGTATTGCCTAAATAATTCTTCTTGCCTGGCGTATGCATTTGTTAATAATATAGGGTGTTTGGTCTGGTCCAAAGACCTTATTGATATGCAGGAGTTTTCCTCTGGAGGAACAGACATTTTCATTCGCCTAGCACATGCAGACCTAGGAAAAAGGCAAGTAAAAACGAAGTACTTTGGATCGACTGGTACAACTGTGACCTCAACAGACCCTCTGCAAGAATATATAAGAGAACATGATCCGTCGGAGCTATTCATCTATGATTTTGATTGCATATTAGTTGCTACAAACACTTTCAGTAACACAAACAAACTTGGTGAAGGAGGATTTGGCCCAGTTTATAAGGATGAGAAGTTGCTAATTTATGAGTTCATGCCAAACAAAAGCTTGGATACTTTTCTATTCGATCCAATGAAAAGAGCACTGCTTGATTGGGCCAGACGCTTCAACATAATTCAGGGTGTCGCTAGAGGACTTCTTTATCTTCATCATGATTCCTGTTTGAAGGTAATACATAGAGATTTGAAGGTCAGTAATATCCTATTGGATGAGAAGATGAATCCAAAAATTTCAGACTTTGGATTAGCACGCATAGTTGAAGGGGCACAGAATCTAGTGAATACTCGCAAGGTTGTGGGAACACTTGGCTACATATCTCCAGAGTATGCCATGGGAGGGATATTTTCAGAAAAATCTGATGTGTACAGCTTTGGGGTCTTATTATTGGAGATTATTAGCGGCAAGAAGAATACCAGCTTCTATTACAACGAACAACAGCTAGGATTCCTACCTTATGCATGGCACTTATGGAGCGAAGGCAGGGGATTGGATTTGGCAGATGAAGCATTGATTAGTTCATATTCCTCTTCAGAATTGTTGAGATGCGTGCATATTGGGCTTCTTTGTGTACAAGACAATGCTGCAGATAGACCAACCATGGCAGATGTAGTTTTCATGCTAAGTAGTACTGTTACCGATGGTCCACTACCCAAGCGGCCTATATTTACTTTCCAAAGCGCAGTCTGTGATCCCCAACCACAGTATGTAAATGCTTTCTCTGTAAATGAAGCTACCATGTCAGTGATCGAAGGACGATAG

Protein Analysis

1208

Amino Acids

135.44

Weight (kDa)

5.75

Isoelectric Point (pI)

42.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAN_2 PF08276 4 - 57 1e-12 PAN-like domain
PK_Tyr_Ser-Thr PF07714 165 - 367 5e-47 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 166 - 364 5.1e-44 Protein kinase domain
B_lectin PF01453 534 - 639 5.8e-30 D-mannose binding lectin
S_locus_glycop PF00954 673 - 782 4e-27 S-locus glycoprotein domain
PAN_2 PF08276 815 - 873 9.5e-14 PAN-like domain
PK_Tyr_Ser-Thr PF07714 958 - 1100 3.6e-28 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 958 - 1093 2.2e-27 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2871
Acc65I GGTACC 1 cut(s) 2479
AccB1I GGYRCC 3 cut(s) 87, 2239, 2479
AccI GTMKAC 1 cut(s) 1047
AccIII TCCGGA 2 cut(s) 593, 1003
AciI CCGC 3 cut(s) 1020, 3267, 3523
AcoI YGGCCR 1 cut(s) 1611
AcsI RAATTY 4 cut(s) 32, 912, 1506, 3096
AcuI CTGAAG 5 cut(s) 629, 1482, 1737, 2538, 3381
AfiI CCNNNNNNNGG 6 cut(s) 1020, 1272, 1937, 2114, 2115, 3204
AflIII ACRYGT 1 cut(s) 346
AhdI GACNNNNNGTC 1 cut(s) 1642
AjnI CCWGG 5 cut(s) 108, 888, 1519, 1910, 2556
AjuI GAANNNNNNNTTGG 2 cut(s) 2841, 2873
Alw21I GWGCWC 1 cut(s) 2953
Alw26I GTCTC 3 cut(s) 1005, 1519, 2437
AlwNI CAGNNNCTG 2 cut(s) 1760, 1763
Ama87I CYCGRG 1 cut(s) 1728
Aor13HI TCCGGA 2 cut(s) 593, 1003
AoxI GGCC 6 cut(s) 1274, 1611, 2053, 2860, 2964, 3524
ApeKI GCWGC 6 cut(s) 319, 678, 1083, 1757, 1760, 3449
ApoI RAATTY 4 cut(s) 32, 912, 1506, 3096
AseI ATTAAT 2 cut(s) 251, 1995
Asp718I GGTACC 1 cut(s) 2479
AspA2I CCTAGG 1 cut(s) 2674
AspLEI GCGC 2 cut(s) 315, 3548
AspS9I GGNCC 9 cut(s) 150, 527, 1322, 2027, 2276, 2598, 2861, 2964, 3509
AsuC2I CCSGG 1 cut(s) 1500
AsuHPI GGTGA 4 cut(s) 16, 1517, 1931, 2858
AvaI CYCGRG 1 cut(s) 1728
AvaII GGWCC 7 cut(s) 150, 527, 1322, 2027, 2276, 2598, 3509
AvrII CCTAGG 1 cut(s) 2674
BaeGI GKGCMC 2 cut(s) 2242, 3136
BaeI ACNNNNGTAYC 2 cut(s) 2709, 2742
BalI TGGCCA 1 cut(s) 1613
BanI GGYRCC 3 cut(s) 87, 2239, 2479
BauI CACGAG 1 cut(s) 987
BbsI GAAGAC 2 cut(s) 1728, 2526
Bbv12I GWGCWC 1 cut(s) 2953
BbvCI CCTCAGC 1 cut(s) 2349
BbvI GCAGC 6 cut(s) 306, 665, 1095, 1747, 1769, 3436
BccI CCATC 7 cut(s) 840, 1313, 1544, 1682, 1939, 2444, 3500
BceAI ACGGC 2 cut(s) 282, 1250
BciT130I CCWGG 5 cut(s) 110, 890, 1521, 1912, 2558
BciVI GTATCC 2 cut(s) 730, 2914
BcnI CCSGG 1 cut(s) 1500
BcoDI GTCTC 3 cut(s) 1005, 1519, 2437
BfmI CTRYAG 2 cut(s) 1048, 3450
BfuI GTATCC 2 cut(s) 730, 2914
BisI GCNGC 8 cut(s) 320, 679, 1084, 1758, 1761, 3268, 3450, 3524
BlnI CCTAGG 1 cut(s) 2674
BlsI GCNGC 8 cut(s) 321, 680, 1085, 1759, 1762, 3269, 3451, 3525
BmcAI AGTACT 4 cut(s) 1750, 2152, 2702, 3496
Bme1390I CCNGG 6 cut(s) 110, 890, 1500, 1521, 1912, 2558
Bme18I GGWCC 7 cut(s) 150, 527, 1322, 2027, 2276, 2598, 3509
BmeRI GACNNNNNGTC 1 cut(s) 1642
BmeT110I CYCGRG 1 cut(s) 1728
BmgT120I GGNCC 9 cut(s) 150, 527, 1322, 2027, 2276, 2598, 2861, 2964, 3509
BmiI GGNNCC 4 cut(s) 89, 2215, 2241, 2481
BmrFI CCNGG 6 cut(s) 110, 890, 1500, 1521, 1912, 2558
BmrI ACTGGG 5 cut(s) 518, 2123, 2230, 2242, 2858
BmsI GCATC 3 cut(s) 1217, 1290, 3401
BmuI ACTGGG 5 cut(s) 518, 2123, 2230, 2242, 2858
BpiI GAAGAC 2 cut(s) 1728, 2526
BplI GAGNNNNNCTC 4 cut(s) 167, 199, 2615, 2647
BpmI CTGGAG 3 cut(s) 1697, 2655, 3171
Bpu10I CCTNAGC 2 cut(s) 1332, 2349
BpuMI CCSGG 1 cut(s) 1500
BsaBI GATNNNNATC 1 cut(s) 1926
BsaI GGTCTC 1 cut(s) 2437
BsaJI CCNNGG 7 cut(s) 1014, 1266, 1519, 2030, 2674, 3198, 3465
BsaWI WCCGGW 3 cut(s) 593, 1003, 1702
BsaXI ACNNNNNCTCC 8 cut(s) 1773, 1800, 1803, 1830, 2011, 2041, 2370, 2400
Bsc4I CCNNNNNNNGG 6 cut(s) 1020, 1272, 1937, 2114, 2115, 3204
Bse1I ACTGG 8 cut(s) 513, 530, 2118, 2225, 2237, 2375, 2719, 2864
Bse3DI GCAATG 2 cut(s) 774, 1672
Bse8I GATNNNNATC 1 cut(s) 1926
BseAI TCCGGA 2 cut(s) 593, 1003
BseBI CCWGG 5 cut(s) 110, 890, 1521, 1912, 2558
BseDI CCNNGG 7 cut(s) 1014, 1266, 1519, 2030, 2674, 3198, 3465
BseGI GGATG 8 cut(s) 58, 898, 1201, 1369, 1947, 2435, 2881, 3082
BseJI GATNNNNATC 1 cut(s) 1926
BseLI CCNNNNNNNGG 6 cut(s) 1020, 1272, 1937, 2114, 2115, 3204
BseMI GCAATG 2 cut(s) 774, 1672
BseMII CTCAG 3 cut(s) 983, 1374, 2340
BseNI ACTGG 8 cut(s) 513, 530, 2118, 2225, 2237, 2375, 2719, 2864
BseRI GAGGAG 2 cut(s) 707, 1581
BseSI GKGCMC 2 cut(s) 2242, 3136
BseXI GCAGC 6 cut(s) 306, 665, 1095, 1747, 1769, 3436
BshFI GGCC 6 cut(s) 1276, 1613, 2055, 2862, 2966, 3526
BshNI GGYRCC 3 cut(s) 87, 2239, 2479
BsiHKAI GWGCWC 1 cut(s) 2953
BsiHKCI CYCGRG 1 cut(s) 1728
BsiSI CCGG 4 cut(s) 594, 1004, 1499, 1703
BslFI GGGAC 3 cut(s) 961, 1515, 2131
BslI CCNNNNNNNGG 6 cut(s) 1020, 1272, 1937, 2114, 2115, 3204
BsmAI GTCTC 3 cut(s) 1005, 1519, 2437
BsmFI GGGAC 3 cut(s) 961, 1515, 2131
BsmI GAATGC 1 cut(s) 681
BsnI GGCC 6 cut(s) 1276, 1613, 2055, 2862, 2966, 3526
Bso31I GGTCTC 1 cut(s) 2437
BsoBI CYCGRG 1 cut(s) 1728
Bsp1286I GDGCHC 3 cut(s) 2242, 2953, 3136
Bsp13I TCCGGA 2 cut(s) 593, 1003
Bsp1407I TGTACA 5 cut(s) 169, 1252, 2291, 3231, 3436
Bsp19I CCATGG 4 cut(s) 1014, 2030, 3198, 3465
BspACI CCGC 3 cut(s) 1020, 3267, 3523
BspANI GGCC 6 cut(s) 1276, 1613, 2055, 2862, 2966, 3526
BspCNI CTCAG 3 cut(s) 982, 1373, 2341
BspEI TCCGGA 2 cut(s) 593, 1003
BspHI TCATGA 3 cut(s) 28, 835, 3019
BspLI GGNNCC 4 cut(s) 89, 2215, 2241, 2481
BspMAI CTGCAG 1 cut(s) 3454
BspT107I GGYRCC 3 cut(s) 87, 2239, 2479
BspTNI GGTCTC 1 cut(s) 2437
BsrDI GCAATG 2 cut(s) 774, 1672
BsrGI TGTACA 5 cut(s) 169, 1252, 2291, 3231, 3436
BsrI ACTGG 8 cut(s) 513, 530, 2118, 2225, 2237, 2375, 2719, 2864
BssECI CCNNGG 7 cut(s) 1014, 1266, 1519, 2030, 2674, 3198, 3465
BssSI CACGAG 1 cut(s) 987
BssT1I CCWWGG 5 cut(s) 1014, 2030, 2674, 3198, 3465
Bst2BI CACGAG 1 cut(s) 987
Bst2UI CCWGG 5 cut(s) 110, 890, 1521, 1912, 2558
Bst4CI ACNGT 9 cut(s) 87, 1383, 1423, 1802, 2150, 2414, 2725, 3499, 3570
Bst6I CTCTTC 5 cut(s) 603, 684, 2179, 2456, 3400
BstAUI TGTACA 5 cut(s) 169, 1252, 2291, 3231, 3436
BstC8I GCNNGC 4 cut(s) 259, 317, 3118, 3416
BstDEI CTNAG 7 cut(s) 327, 969, 1304, 1332, 1360, 2349, 3488
BstDSI CCRYGG 5 cut(s) 1014, 1266, 2030, 3198, 3465
BstEII GGTNACC 1 cut(s) 1523
BstF5I GGATG 8 cut(s) 58, 898, 1201, 1369, 1947, 2435, 2881, 3082
BstHHI GCGC 2 cut(s) 315, 3548
BstMAI GTCTC 3 cut(s) 1005, 1519, 2437
BstMWI GCNNNNNNNGC 5 cut(s) 319, 328, 1282, 3371, 3424
BstNI CCWGG 5 cut(s) 110, 890, 1521, 1912, 2558
BstNSI RCATGY 3 cut(s) 350, 1864, 2669
BstPI GGTNACC 1 cut(s) 1523
BstSCI CCNGG 6 cut(s) 108, 888, 1498, 1519, 1910, 2556
BstSFI CTRYAG 2 cut(s) 1048, 3450
BstSLI GKGCMC 2 cut(s) 2242, 3136
BstV1I GCAGC 6 cut(s) 306, 665, 1095, 1747, 1769, 3436
BstV2I GAAGAC 2 cut(s) 1728, 2526
BstXI CCANNNNNNTGG 1 cut(s) 289
BsuI GTATCC 2 cut(s) 730, 2914
BsuRI GGCC 6 cut(s) 1276, 1613, 2055, 2862, 2966, 3526
BtgI CCRYGG 5 cut(s) 1014, 1266, 2030, 3198, 3465
BtgZI GCGATG 1 cut(s) 2463
BtsCI GGATG 8 cut(s) 58, 898, 1201, 1369, 1947, 2435, 2881, 3082
BtsI GCAGTG 1 cut(s) 2951
BtsIMutI CAGTG 4 cut(s) 1368, 1428, 2951, 3615
Cac8I GCNNGC 4 cut(s) 259, 317, 3118, 3416
CaiI CAGNNNCTG 2 cut(s) 1760, 1763
CciI TCATGA 3 cut(s) 28, 835, 3019
CfoI GCGC 2 cut(s) 315, 3548
Cfr13I GGNCC 9 cut(s) 150, 527, 1322, 2027, 2276, 2598, 2861, 2964, 3509
CseI GACGC 2 cut(s) 1616, 2979
DdeI CTNAG 7 cut(s) 327, 969, 1304, 1332, 1360, 2349, 3488
DraI TTTAAA 1 cut(s) 2092
DriI GACNNNNNGTC 1 cut(s) 1642
EaeI YGGCCR 1 cut(s) 1611
Eam1104I CTCTTC 5 cut(s) 603, 684, 2179, 2456, 3400
Eam1105I GACNNNNNGTC 1 cut(s) 1642
EarI CTCTTC 5 cut(s) 603, 684, 2179, 2456, 3400
Eco130I CCWWGG 5 cut(s) 1014, 2030, 2674, 3198, 3465
Eco31I GGTCTC 1 cut(s) 2437
Eco47I GGWCC 7 cut(s) 150, 527, 1322, 2027, 2276, 2598, 3509
Eco57I CTGAAG 5 cut(s) 629, 1482, 1737, 2538, 3381
Eco88I CYCGRG 1 cut(s) 1728
Eco91I GGTNACC 1 cut(s) 1523
EcoO65I GGTNACC 1 cut(s) 1523
EcoRII CCWGG 5 cut(s) 108, 888, 1519, 1910, 2556
EcoT14I CCWWGG 5 cut(s) 1014, 2030, 2674, 3198, 3465
EcoT22I ATGCAT 4 cut(s) 121, 1144, 2569, 3328
ErhI CCWWGG 5 cut(s) 1014, 2030, 2674, 3198, 3465
FalI AAGNNNNNCTT 4 cut(s) 147, 179, 756, 788
FaqI GGGAC 3 cut(s) 961, 1515, 2131
FauI CCCGC 1 cut(s) 1013
FblI GTMKAC 1 cut(s) 1047
Fnu4HI GCNGC 8 cut(s) 320, 679, 1084, 1758, 1761, 3268, 3450, 3524
FokI GGATG 8 cut(s) 65, 905, 1208, 1356, 1954, 2422, 2888, 3089
Fsp4HI GCNGC 8 cut(s) 320, 679, 1084, 1758, 1761, 3268, 3450, 3524
GlaI GCGC 2 cut(s) 314, 3547
GluI GCNGC 8 cut(s) 320, 679, 1084, 1758, 1761, 3268, 3450, 3524
GsuI CTGGAG 3 cut(s) 1697, 2655, 3171
HaeIII GGCC 6 cut(s) 1276, 1613, 2055, 2862, 2966, 3526
HapII CCGG 4 cut(s) 594, 1004, 1499, 1703
HgaI GACGC 2 cut(s) 1616, 2979
HhaI GCGC 2 cut(s) 315, 3548
Hin6I GCGC 2 cut(s) 313, 3546
HinP1I GCGC 2 cut(s) 313, 3546
HincII GTYRAC 1 cut(s) 1713
HindII GTYRAC 1 cut(s) 1713
HindIII AAGCTT 4 cut(s) 730, 1099, 1410, 2914
HpaII CCGG 4 cut(s) 594, 1004, 1499, 1703
HphI GGTGA 4 cut(s) 16, 1517, 1931, 2858
Hpy166II GTNNAC 7 cut(s) 1048, 1253, 1713, 2276, 3232, 3437, 3512
Hpy8I GTNNAC 7 cut(s) 1048, 1253, 1713, 2276, 3232, 3437, 3512
Hpy99I CGWCG 1 cut(s) 2776
HpyCH4III ACNGT 9 cut(s) 87, 1383, 1423, 1802, 2150, 2414, 2725, 3499, 3570
HpyCH4IV ACGT 1 cut(s) 1435
HpyF10VI GCNNNNNNNGC 5 cut(s) 319, 328, 1282, 3371, 3424
HpyF3I CTNAG 7 cut(s) 327, 969, 1304, 1332, 1360, 2349, 3488
HpySE526I ACGT 1 cut(s) 1435
HspAI GCGC 2 cut(s) 313, 3546
Kpn2I TCCGGA 2 cut(s) 593, 1003
KpnI GGTACC 1 cut(s) 2483
LmnI GCTCC 6 cut(s) 596, 1678, 2219, 2358, 2776, 3339
Lsp1109I GCAGC 6 cut(s) 306, 665, 1095, 1747, 1769, 3436
LweI GCATC 3 cut(s) 1217, 1290, 3401
MaeII ACGT 1 cut(s) 1435
MaeIII GTNAC 9 cut(s) 40, 699, 1310, 1523, 2228, 2414, 2725, 2828, 3499
MhlI GDGCHC 3 cut(s) 2242, 2953, 3136
MlsI TGGCCA 1 cut(s) 1613
MluNI TGGCCA 1 cut(s) 1613
MlyI GAGTC 2 cut(s) 17, 2002
MmeI TCCRAC 5 cut(s) 779, 1849, 1933, 2241, 2754
Mox20I TGGCCA 1 cut(s) 1613
Mph1103I ATGCAT 4 cut(s) 121, 1144, 2569, 3328
MroI TCCGGA 2 cut(s) 593, 1003
MscI TGGCCA 1 cut(s) 1613
MseI TTAA 7 cut(s) 126, 251, 473, 792, 1995, 2091, 2574
MslI CAYNNNNRTG 2 cut(s) 1421, 3608
Msp20I TGGCCA 1 cut(s) 1613
MspA1I CMGCKG 2 cut(s) 1760, 2348
MspI CCGG 4 cut(s) 594, 1004, 1499, 1703
MspR9I CCNGG 6 cut(s) 110, 890, 1500, 1521, 1912, 2558
Mva1269I GAATGC 1 cut(s) 681
MvaI CCWGG 5 cut(s) 110, 890, 1521, 1912, 2558
MwoI GCNNNNNNNGC 5 cut(s) 319, 328, 1282, 3371, 3424
NciI CCSGG 1 cut(s) 1500
NcoI CCATGG 4 cut(s) 1014, 2030, 3198, 3465
NlaIV GGNNCC 4 cut(s) 89, 2215, 2241, 2481
NmeAIII GCCGAG 1 cut(s) 44
NmuCI GTSAC 3 cut(s) 1310, 1523, 2725
NsiI ATGCAT 4 cut(s) 121, 1144, 2569, 3328
NspI RCATGY 3 cut(s) 350, 1864, 2669
PagI TCATGA 3 cut(s) 28, 835, 3019
PciI ACATGT 1 cut(s) 346
PctI GAATGC 1 cut(s) 681
PfoI TCCNGGA 2 cut(s) 888, 1910
PkrI GCNGC 8 cut(s) 321, 680, 1085, 1759, 1762, 3269, 3451, 3525
PleI GAGTC 2 cut(s) 17, 2002
PpsI GAGTC 2 cut(s) 17, 2002
PscI ACATGT 1 cut(s) 346
PshBI ATTAAT 2 cut(s) 251, 1995
PsiI TTATAA 1 cut(s) 2871
Psp6I CCWGG 5 cut(s) 108, 888, 1519, 1910, 2556
PspEI GGTNACC 1 cut(s) 1523
PspGI CCWGG 5 cut(s) 108, 888, 1519, 1910, 2556
PspN4I GGNNCC 4 cut(s) 89, 2215, 2241, 2481
PspPI GGNCC 9 cut(s) 150, 527, 1322, 2027, 2276, 2598, 2861, 2964, 3509
PstI CTGCAG 1 cut(s) 3454
PstNI CAGNNNCTG 2 cut(s) 1760, 1763
PvuII CAGCTG 2 cut(s) 1760, 2348
RseI CAYNNNNRTG 2 cut(s) 1421, 3608
SaqAI TTAA 7 cut(s) 126, 251, 473, 792, 1995, 2091, 2574
SatI GCNGC 8 cut(s) 320, 679, 1084, 1758, 1761, 3268, 3450, 3524
Sau96I GGNCC 9 cut(s) 150, 527, 1322, 2027, 2276, 2598, 2861, 2964, 3509
ScaI AGTACT 4 cut(s) 1750, 2152, 2702, 3496
SchI GAGTC 2 cut(s) 17, 2002
ScrFI CCNGG 6 cut(s) 110, 890, 1500, 1521, 1912, 2558
SduI GDGCHC 3 cut(s) 2242, 2953, 3136
SfaNI GCATC 3 cut(s) 1217, 1290, 3401
SfcI CTRYAG 2 cut(s) 1048, 3450
SinI GGWCC 7 cut(s) 150, 527, 1322, 2027, 2276, 2598, 3509
SmiMI CAYNNNNRTG 2 cut(s) 1421, 3608
SsiI CCGC 3 cut(s) 1020, 3267, 3523
SspI AATATT 3 cut(s) 796, 1720, 2187
StyD4I CCNGG 6 cut(s) 108, 888, 1498, 1519, 1910, 2556
StyI CCWWGG 5 cut(s) 1014, 2030, 2674, 3198, 3465
TaaI ACNGT 9 cut(s) 87, 1383, 1423, 1802, 2150, 2414, 2725, 3499, 3570
TaiI ACGT 1 cut(s) 1438
TaqI TCGA 6 cut(s) 412, 1548, 2006, 2711, 2934, 3615
TaqII GACCGA 1 cut(s) 2419
TatI WGTACW 9 cut(s) 169, 1252, 1748, 2150, 2291, 2700, 3231, 3436, 3494
TauI GCSGC 2 cut(s) 3270, 3526
Tru1I TTAA 7 cut(s) 126, 251, 473, 792, 1995, 2091, 2574
Tru9I TTAA 7 cut(s) 126, 251, 473, 792, 1995, 2091, 2574
TscAI CASTG 4 cut(s) 1368, 1428, 2958, 3615
TseFI GTSAC 3 cut(s) 1310, 1523, 2725
TseI GCWGC 6 cut(s) 319, 678, 1083, 1757, 1760, 3449
Tsp45I GTSAC 3 cut(s) 1310, 1523, 2725
TspGWI ACGGA 1 cut(s) 2760
TspRI CASTG 4 cut(s) 1368, 1428, 2958, 3615
VpaK11BI GGWCC 7 cut(s) 150, 527, 1322, 2027, 2276, 2598, 3509
VspI ATTAAT 2 cut(s) 251, 1995
XapI RAATTY 4 cut(s) 32, 912, 1506, 3096
XbaI TCTAGA 1 cut(s) 958
XceI RCATGY 3 cut(s) 350, 1864, 2669
XmaJI CCTAGG 1 cut(s) 2674
XmiI GTMKAC 1 cut(s) 1047
ZrmI AGTACT 4 cut(s) 1750, 2152, 2702, 3496
Zsp2I ATGCAT 4 cut(s) 121, 1144, 2569, 3328
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.