pycom05g30330

PAN-like domain

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
30467887 .. 30469991
2105 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g30330.2

Sequence Viewer

Length: 1773 bp
ATGAATTCCTCCATGTTCTTCCTATTCTTCTTCAGCTTGCTTCTTCTGTCACGGCACCATTGTGCCGAAGTTTACGCGATAAGTCCTGCACACCCATTATCAGAGGGACAAACTCTTGTCTCCCCCCGCCAGGTTTTCGAATTGGGATTCTTCAGTCCTAATAATAATTCCGGTAATAACAAGTATGTGGGGATATGGCACAAGAGTATTTTTCCTCGAAAAGTTGTATGGGTGGCCAACAGAGAAAAGCCGATTGCAGCTTCAGACACCTTGGCTAGTTTGAGAATAAGCAGCAAGGGGAATCTGGAGCTTGTAGACGGAAAACAGAATCCTCTTTGGTCAACGAATATTTCGGTGCTATCTAATGGTTCAGCTGCAGCTCTTTTAGACACCGGAAACTTTGTTGTAAAAGATGATGACGTCGGAGCTGAACAGTTGTGGCAGAGTTTTGATTATCCTAGCGACACACTTCTACCAAGTATGCTGCTGGGGTTCGATAGCAAATCTGGAGAGACGAATTTCCTGACTTCCTGGAAAAGTGAGAGTGATCGATCTACGGGGATGTTCATGGTTGGATTGACACCACAGGTGCCATCACAGATTGTAGTTTGGATTAATGGATCAACTCCCTACTGGAGAACCGGGCCATGGGATAAATCAACGTTCATCGGGCTGCCAGGTACAAATGATGCATATACAAGTGGATTCAGATTAGATGATAATGCAGAGGAAGGAACAAAGTATTATTCTTATAATTCTTATAATTACGGGGACATGTTGGCATACATGGACATCTCTTCAGACGGTACAATTAATTTTAAGTATTCTCAAAGTGGAGAGAACTGGATTCTTAACTTTGTATCACAAAATAATTCATGTGATAAGTATGCAGCATGCGGACCTTTTGGGATTTGCAAACGTTCTGAATCTCCAACAACTCCAATATGCAAGTGTTTGAAAGGGTTTGTACCAAAGTCACACGAGGAATGGAGCAAAGGAAACAGGACAGGAGGGTGTGTGAGGCAAACCAAATTGTTTTGTGAGACTAATACAAGTCAGTCAGTCGCTTCGAGAAGAAATGAAGATGGGTTTTTGAAGATGTCGCAGTTAAAAGTACCAGATTTTCATGAATATATCCAGATCCCGATTTCAGATGCACCAAAATGCAGGACACAGTGCCTAAACAATTGTTCTTGCCTGGCTTATGCATATGTTGATAACATAGGATGTTTGGTCTGGTCCAAAGACCTTCTTGATATACAGGAATTTGCCTATGGCGGAGAAGATCTTTTTATTCGCCTGGACCGCTCAGAACTTGGTGAAGGAAAGCCAATAAAGTTAATTGCCAGCCTCACAGCAATTTGTTTGATTAGTATCTTGGGTGCCCTAGGGTTCGGTTTCCACAGGTTGCAAGCTAATAATAAAAAGGGAAACGCCAAATTAACTGATACAATTGAGAACGGAAGAGACACTCTTCAAGAATATATTGGAAAGCATGATCCATCAGAGCTGTTCATCTATAATTTCGATAGCATATTAATCGCAACAAACAATTTCAGTATCACAAATAAACTCGGGGAAGGGGGATTTGGCCCTGTTTACAAGGGTAAGCTGCAAGAAGGGAAGGAAATAGCAGTAAAAAGACTATCTAGTAGCTCAGGGCAGGGCATGGAAGAGTTCAAGAATGAAGTGCTGTTGATCGATCCAAACTTCAACATAAAAATCTTGTTAGGATCTTGGGTTGCTGCGTTAAAGACGACGAGAAGTTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

591

Amino Acids

65.54

Weight (kDa)

6.14

Isoelectric Point (pI)

38.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 753, 762
AatII GACGTC 1 cut(s) 423
AccB1I GGYRCC 3 cut(s) 54, 589, 1382
AccBSI CCGCTC 1 cut(s) 1308
AccI GTMKAC 1 cut(s) 315
AccII CGCG 1 cut(s) 77
AciI CCGC 4 cut(s) 127, 897, 1278, 1306
AclI AACGTT 2 cut(s) 662, 919
AclWI GGATC 5 cut(s) 628, 1135, 1493, 1697, 1741
AcoI YGGCCR 1 cut(s) 234
AcsI RAATTY 3 cut(s) 4, 517, 1265
AcuI CTGAAG 4 cut(s) 16, 136, 246, 783
AcyI GRCGYC 1 cut(s) 420
AfaI GTAC 4 cut(s) 682, 808, 969, 1116
AfiI CCNNNNNNNGG 2 cut(s) 130, 648
AflIII ACRYGT 1 cut(s) 774
AgsI TTSAA 5 cut(s) 958, 1096, 1478, 1681, 1714
AjnI CCWGG 5 cut(s) 129, 530, 676, 1197, 1299
AjuI GAANNNNNNNTTGG 2 cut(s) 1572, 1604
AleI CACNNNNGTG 1 cut(s) 60
Alw26I GTCTC 4 cut(s) 124, 506, 1037, 1461
AlwI GGATC 5 cut(s) 628, 1135, 1493, 1697, 1741
Ama87I CYCGRG 1 cut(s) 1574
AoxI GGCC 3 cut(s) 234, 644, 1591
ApeKI GCWGC 9 cut(s) 257, 291, 374, 377, 484, 673, 890, 1612, 1745
ApoI RAATTY 3 cut(s) 4, 517, 1265
AseI ATTAAT 3 cut(s) 615, 813, 1538
AspA2I CCTAGG 1 cut(s) 1387
AspS9I GGNCC 5 cut(s) 644, 899, 1239, 1303, 1592
AsuC2I CCSGG 1 cut(s) 643
AsuHPI GGTGA 1 cut(s) 1331
AsuII TTCGAA 1 cut(s) 138
AvaI CYCGRG 1 cut(s) 1574
AvaII GGWCC 3 cut(s) 899, 1239, 1303
AvrII CCTAGG 1 cut(s) 1387
BaeGI GKGCMC 1 cut(s) 1387
BalI TGGCCA 1 cut(s) 236
BanI GGYRCC 3 cut(s) 54, 589, 1382
BauI CACGAG 1 cut(s) 980
BbvI GCAGC 9 cut(s) 269, 303, 361, 389, 471, 660, 902, 1599, 1732
BccI CCATC 3 cut(s) 601, 1079, 1510
BceAI ACGGC 1 cut(s) 68
BcgI CGANNNNNNTGC 2 cut(s) 1522, 1556
BciT130I CCWGG 5 cut(s) 131, 532, 678, 1199, 1301
BcnI CCSGG 1 cut(s) 643
BcoDI GTCTC 4 cut(s) 124, 506, 1037, 1461
BfaI CTAG 4 cut(s) 276, 459, 1388, 1650
BfmI CTRYAG 1 cut(s) 375
BglII AGATCT 1 cut(s) 1285
BisI GCNGC 9 cut(s) 258, 292, 375, 378, 485, 674, 891, 1613, 1746
BlnI CCTAGG 1 cut(s) 1387
BlsI GCNGC 9 cut(s) 259, 293, 376, 379, 486, 675, 892, 1614, 1747
Bme1390I CCNGG 6 cut(s) 131, 532, 643, 678, 1199, 1301
Bme18I GGWCC 3 cut(s) 899, 1239, 1303
BmeT110I CYCGRG 1 cut(s) 1574
BmgT120I GGNCC 5 cut(s) 644, 899, 1239, 1303, 1592
BmiI GGNNCC 3 cut(s) 56, 591, 1384
BmrFI CCNGG 6 cut(s) 131, 532, 643, 678, 1199, 1301
BmsI GCATC 2 cut(s) 679, 1144
BpmI CTGGAG 3 cut(s) 326, 528, 655
Bpu10I CCTNAGC 1 cut(s) 1657
Bpu14I TTCGAA 1 cut(s) 138
BpuMI CCSGG 1 cut(s) 643
Bsa29I ATCGAT 2 cut(s) 550, 1701
BsaBI GATNNNNATC 1 cut(s) 1373
BsaHI GRCGYC 1 cut(s) 420
BsaJI CCNNGG 3 cut(s) 270, 647, 1387
BsaWI WCCGGW 2 cut(s) 170, 392
BsaXI ACNNNNNCTCC 2 cut(s) 1002, 1032
Bsc4I CCNNNNNNNGG 2 cut(s) 130, 648
Bse1I ACTGG 2 cut(s) 638, 848
Bse8I GATNNNNATC 1 cut(s) 1373
BseBI CCWGG 5 cut(s) 131, 532, 678, 1199, 1301
BseCI ATCGAT 2 cut(s) 550, 1701
BseDI CCNNGG 3 cut(s) 270, 647, 1387
BseGI GGATG 2 cut(s) 567, 1232
BseJI GATNNNNATC 1 cut(s) 1373
BseLI CCNNNNNNNGG 2 cut(s) 130, 648
BseMII CTCAG 2 cut(s) 1323, 1671
BseNI ACTGG 2 cut(s) 638, 848
BseSI GKGCMC 1 cut(s) 1387
BseXI GCAGC 9 cut(s) 269, 303, 361, 389, 471, 660, 902, 1599, 1732
BseYI CCCAGC 1 cut(s) 487
BsgI GTGCAG 1 cut(s) 72
Bsh1236I CGCG 1 cut(s) 77
BshFI GGCC 3 cut(s) 236, 646, 1593
BshNI GGYRCC 3 cut(s) 54, 589, 1382
BshVI ATCGAT 2 cut(s) 550, 1701
BsiHKCI CYCGRG 1 cut(s) 1574
BsiSI CCGG 3 cut(s) 171, 393, 642
BslFI GGGAC 2 cut(s) 120, 785
BslI CCNNNNNNNGG 2 cut(s) 130, 648
BsmAI GTCTC 4 cut(s) 124, 506, 1037, 1461
BsmBI CGTCTC 1 cut(s) 506
BsmFI GGGAC 2 cut(s) 120, 785
BsnI GGCC 3 cut(s) 236, 646, 1593
BsoBI CYCGRG 1 cut(s) 1574
Bsp119I TTCGAA 1 cut(s) 138
Bsp1286I GDGCHC 1 cut(s) 1387
Bsp143I GATC 9 cut(s) 547, 551, 620, 1140, 1285, 1498, 1698, 1702, 1733
Bsp19I CCATGG 1 cut(s) 647
BspACI CCGC 4 cut(s) 127, 897, 1278, 1306
BspANI GGCC 3 cut(s) 236, 646, 1593
BspCNI CTCAG 2 cut(s) 1322, 1670
BspDI ATCGAT 2 cut(s) 550, 1701
BspFNI CGCG 1 cut(s) 77
BspHI TCATGA 1 cut(s) 1126
BspLI GGNNCC 3 cut(s) 56, 591, 1384
BspMAI CTGCAG 1 cut(s) 379
BspPI GGATC 5 cut(s) 628, 1135, 1493, 1697, 1741
BspT104I TTCGAA 1 cut(s) 138
BspT107I GGYRCC 3 cut(s) 54, 589, 1382
BsrBI CCGCTC 1 cut(s) 1308
BsrI ACTGG 2 cut(s) 638, 848
BssECI CCNNGG 3 cut(s) 270, 647, 1387
BssMI GATC 9 cut(s) 547, 551, 620, 1140, 1285, 1498, 1698, 1702, 1733
BssNI GRCGYC 1 cut(s) 420
BssSI CACGAG 1 cut(s) 980
BssT1I CCWWGG 3 cut(s) 270, 647, 1387
Bst2BI CACGAG 1 cut(s) 980
Bst2UI CCWGG 5 cut(s) 131, 532, 678, 1199, 1301
Bst4CI ACNGT 3 cut(s) 435, 806, 1176
Bst6I CTCTTC 4 cut(s) 802, 1459, 1479, 1668
BstACI GRCGYC 1 cut(s) 420
BstBI TTCGAA 1 cut(s) 138
BstC8I GCNNGC 4 cut(s) 38, 895, 1348, 1413
BstDEI CTNAG 2 cut(s) 1309, 1657
BstDSI CCRYGG 1 cut(s) 647
BstF5I GGATG 2 cut(s) 567, 1232
BstFNI CGCG 1 cut(s) 77
BstKTI GATC 9 cut(s) 550, 554, 623, 1143, 1288, 1501, 1701, 1705, 1736
BstMAI GTCTC 4 cut(s) 124, 506, 1037, 1461
BstMBI GATC 9 cut(s) 547, 551, 620, 1140, 1285, 1498, 1698, 1702, 1733
BstMWI GCNNNNNNNGC 1 cut(s) 1305
BstNI CCWGG 5 cut(s) 131, 532, 678, 1199, 1301
BstNSI RCATGY 2 cut(s) 778, 897
BstSCI CCNGG 6 cut(s) 129, 530, 641, 676, 1197, 1299
BstSFI CTRYAG 1 cut(s) 375
BstSLI GKGCMC 1 cut(s) 1387
BstUI CGCG 1 cut(s) 77
BstV1I GCAGC 9 cut(s) 269, 303, 361, 389, 471, 660, 902, 1599, 1732
BstX2I RGATCY 3 cut(s) 1140, 1285, 1733
BstYI RGATCY 3 cut(s) 1140, 1285, 1733
Bsu15I ATCGAT 2 cut(s) 550, 1701
BsuRI GGCC 3 cut(s) 236, 646, 1593
BsuTUI ATCGAT 2 cut(s) 550, 1701
BtgI CCRYGG 1 cut(s) 647
BtsCI GGATG 2 cut(s) 567, 1232
BtsIMutI CAGTG 1 cut(s) 1181
Cac8I GCNNGC 4 cut(s) 38, 895, 1348, 1413
CciI TCATGA 1 cut(s) 1126
Cfr13I GGNCC 5 cut(s) 644, 899, 1239, 1303, 1592
ClaI ATCGAT 2 cut(s) 550, 1701
Csp6I GTAC 4 cut(s) 681, 807, 968, 1115
CviQI GTAC 4 cut(s) 681, 807, 968, 1115
DdeI CTNAG 2 cut(s) 1309, 1657
DpnI GATC 9 cut(s) 549, 553, 622, 1142, 1287, 1500, 1700, 1704, 1735
DpnII GATC 9 cut(s) 547, 551, 620, 1140, 1285, 1498, 1698, 1702, 1733
EaeI YGGCCR 1 cut(s) 234
Eam1104I CTCTTC 4 cut(s) 802, 1459, 1479, 1668
EarI CTCTTC 4 cut(s) 802, 1459, 1479, 1668
EciI GGCGGA 1 cut(s) 1293
Eco130I CCWWGG 3 cut(s) 270, 647, 1387
Eco47I GGWCC 3 cut(s) 899, 1239, 1303
Eco57I CTGAAG 4 cut(s) 16, 136, 246, 783
Eco88I CYCGRG 1 cut(s) 1574
EcoRI GAATTC 1 cut(s) 4
EcoRII CCWGG 5 cut(s) 129, 530, 676, 1197, 1299
EcoT14I CCWWGG 3 cut(s) 270, 647, 1387
EcoT22I ATGCAT 2 cut(s) 694, 1210
ErhI CCWWGG 3 cut(s) 270, 647, 1387
Esp3I CGTCTC 1 cut(s) 506
FalI AAGNNNNNCTT 2 cut(s) 1236, 1268
FaqI GGGAC 2 cut(s) 120, 785
FauI CCCGC 1 cut(s) 134
FauNDI CATATG 1 cut(s) 1210
FblI GTMKAC 1 cut(s) 315
Fnu4HI GCNGC 9 cut(s) 258, 292, 375, 378, 485, 674, 891, 1613, 1746
FokI GGATG 2 cut(s) 574, 1239
Fsp4HI GCNGC 9 cut(s) 258, 292, 375, 378, 485, 674, 891, 1613, 1746
FspBI CTAG 4 cut(s) 276, 459, 1388, 1650
GluI GCNGC 9 cut(s) 258, 292, 375, 378, 485, 674, 891, 1613, 1746
GsaI CCCAGC 1 cut(s) 491
GsuI CTGGAG 3 cut(s) 326, 528, 655
HaeIII GGCC 3 cut(s) 236, 646, 1593
HapII CCGG 3 cut(s) 171, 393, 642
Hin1I GRCGYC 1 cut(s) 420
HincII GTYRAC 1 cut(s) 342
HindII GTYRAC 1 cut(s) 342
HinfI GANTC 6 cut(s) 147, 301, 328, 705, 847, 926
HpaII CCGG 3 cut(s) 171, 393, 642
HphI GGTGA 1 cut(s) 1331
Hpy166II GTNNAC 4 cut(s) 73, 316, 342, 1600
Hpy188I TCNGA 9 cut(s) 103, 265, 425, 710, 802, 925, 1153, 1312, 1507
Hpy8I GTNNAC 4 cut(s) 73, 316, 342, 1600
Hpy99I CGWCG 2 cut(s) 425, 1762
HpyAV CCTTC 6 cut(s) 725, 1259, 1316, 1574, 1613, 1618
HpyCH4III ACNGT 3 cut(s) 435, 806, 1176
HpyCH4IV ACGT 3 cut(s) 420, 662, 919
HpyF10VI GCNNNNNNNGC 1 cut(s) 1305
HpyF3I CTNAG 2 cut(s) 1309, 1657
HpySE526I ACGT 3 cut(s) 420, 662, 919
Hsp92I GRCGYC 1 cut(s) 420
Kzo9I GATC 9 cut(s) 547, 551, 620, 1140, 1285, 1498, 1698, 1702, 1733
LmnI GCTCC 3 cut(s) 307, 425, 990
Lsp1109I GCAGC 9 cut(s) 269, 303, 361, 389, 471, 660, 902, 1599, 1732
LweI GCATC 2 cut(s) 679, 1144
MaeI CTAG 4 cut(s) 276, 459, 1388, 1650
MaeII ACGT 3 cut(s) 420, 662, 919
MaeIII GTNAC 3 cut(s) 48, 975, 1766
MalI GATC 9 cut(s) 549, 553, 622, 1142, 1287, 1500, 1700, 1704, 1735
MbiI CCGCTC 1 cut(s) 1308
MboI GATC 9 cut(s) 547, 551, 620, 1140, 1285, 1498, 1698, 1702, 1733
MfeI CAATTG 2 cut(s) 1186, 1452
MflI RGATCY 3 cut(s) 1140, 1285, 1733
MhlI GDGCHC 1 cut(s) 1387
MlsI TGGCCA 1 cut(s) 236
MluNI TGGCCA 1 cut(s) 236
MmeI TCCRAC 3 cut(s) 403, 553, 956
MnlI CCTC 9 cut(s) 19, 97, 225, 342, 721, 976, 1004, 1014, 1361
Mox20I TGGCCA 1 cut(s) 236
Mph1103I ATGCAT 2 cut(s) 694, 1210
MscI TGGCCA 1 cut(s) 236
MseI TTAA 9 cut(s) 615, 813, 819, 852, 1109, 1340, 1442, 1538, 1751
MslI CAYNNNNRTG 2 cut(s) 60, 1162
Msp20I TGGCCA 1 cut(s) 236
MspA1I CMGCKG 1 cut(s) 374
MspI CCGG 3 cut(s) 171, 393, 642
MspR9I CCNGG 6 cut(s) 131, 532, 643, 678, 1199, 1301
MunI CAATTG 2 cut(s) 1186, 1452
MvaI CCWGG 5 cut(s) 131, 532, 678, 1199, 1301
MvnI CGCG 1 cut(s) 77
MwoI GCNNNNNNNGC 1 cut(s) 1305
NciI CCSGG 1 cut(s) 643
NcoI CCATGG 1 cut(s) 647
NdeI CATATG 1 cut(s) 1210
NdeII GATC 9 cut(s) 547, 551, 620, 1140, 1285, 1498, 1698, 1702, 1733
NlaIV GGNNCC 3 cut(s) 56, 591, 1384
NmuCI GTSAC 2 cut(s) 48, 975
NsiI ATGCAT 2 cut(s) 694, 1210
NspI RCATGY 2 cut(s) 778, 897
NspV TTCGAA 1 cut(s) 138
OliI CACNNNNGTG 1 cut(s) 60
PaeI GCATGC 1 cut(s) 897
PagI TCATGA 1 cut(s) 1126
PciI ACATGT 1 cut(s) 774
PfeI GAWTC 6 cut(s) 147, 301, 328, 705, 847, 926
PfoI TCCNGGA 1 cut(s) 530
PkrI GCNGC 9 cut(s) 259, 293, 376, 379, 486, 675, 892, 1614, 1747
PscI ACATGT 1 cut(s) 774
PshBI ATTAAT 3 cut(s) 615, 813, 1538
PsiI TTATAA 2 cut(s) 753, 762
Psp1406I AACGTT 2 cut(s) 662, 919
Psp6I CCWGG 5 cut(s) 129, 530, 676, 1197, 1299
PspFI CCCAGC 1 cut(s) 487
PspGI CCWGG 5 cut(s) 129, 530, 676, 1197, 1299
PspN4I GGNNCC 3 cut(s) 56, 591, 1384
PspPI GGNCC 5 cut(s) 644, 899, 1239, 1303, 1592
PstI CTGCAG 1 cut(s) 379
PsuI RGATCY 3 cut(s) 1140, 1285, 1733
PvuII CAGCTG 1 cut(s) 374
RsaI GTAC 4 cut(s) 682, 808, 969, 1116
RsaNI GTAC 4 cut(s) 681, 807, 968, 1115
RseI CAYNNNNRTG 2 cut(s) 60, 1162
SaqAI TTAA 9 cut(s) 615, 813, 819, 852, 1109, 1340, 1442, 1538, 1751
SatI GCNGC 9 cut(s) 258, 292, 375, 378, 485, 674, 891, 1613, 1746
Sau3AI GATC 9 cut(s) 547, 551, 620, 1140, 1285, 1498, 1698, 1702, 1733
Sau96I GGNCC 5 cut(s) 644, 899, 1239, 1303, 1592
ScrFI CCNGG 6 cut(s) 131, 532, 643, 678, 1199, 1301
SduI GDGCHC 1 cut(s) 1387
SfaNI GCATC 2 cut(s) 679, 1144
SfcI CTRYAG 1 cut(s) 375
SfuI TTCGAA 1 cut(s) 138
SinI GGWCC 3 cut(s) 899, 1239, 1303
SmiMI CAYNNNNRTG 2 cut(s) 60, 1162
SphI GCATGC 1 cut(s) 897
SsiI CCGC 4 cut(s) 127, 897, 1278, 1306
SspI AATATT 1 cut(s) 349
SspMI CTAG 4 cut(s) 276, 459, 1388, 1650
StyD4I CCNGG 6 cut(s) 129, 530, 641, 676, 1197, 1299
StyI CCWWGG 3 cut(s) 270, 647, 1387
TaaI ACNGT 3 cut(s) 435, 806, 1176
TaiI ACGT 3 cut(s) 423, 665, 922
TaqI TCGA 7 cut(s) 138, 217, 495, 550, 1070, 1527, 1701
TfiI GAWTC 6 cut(s) 147, 301, 328, 705, 847, 926
Tru1I TTAA 9 cut(s) 615, 813, 819, 852, 1109, 1340, 1442, 1538, 1751
Tru9I TTAA 9 cut(s) 615, 813, 819, 852, 1109, 1340, 1442, 1538, 1751
TscAI CASTG 1 cut(s) 1181
TseFI GTSAC 2 cut(s) 48, 975
TseI GCWGC 9 cut(s) 257, 291, 374, 377, 484, 673, 890, 1612, 1745
Tsp45I GTSAC 2 cut(s) 48, 975
TspDTI ATGAA 9 cut(s) 17, 556, 655, 864, 1095, 1115, 1143, 1504, 1701
TspGWI ACGGA 2 cut(s) 333, 1476
TspRI CASTG 1 cut(s) 1181
VpaK11BI GGWCC 3 cut(s) 899, 1239, 1303
VspI ATTAAT 3 cut(s) 615, 813, 1538
XapI RAATTY 3 cut(s) 4, 517, 1265
XceI RCATGY 2 cut(s) 778, 897
XmaJI CCTAGG 1 cut(s) 1387
XmiI GTMKAC 1 cut(s) 315
XspI CTAG 4 cut(s) 276, 459, 1388, 1650
ZraI GACGTC 1 cut(s) 421
Zsp2I ATGCAT 2 cut(s) 694, 1210
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.