Rorug04G0416800

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
57830358 .. 57835690
5333 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0416800.1

Sequence Viewer

Length: 3312 bp
ATGTTGATTTTACCGCGGAGAGCTCGATGGTCATTTCGAGTTCTTCGATCATTGTCTTCCTCTGTCAGCATACCCATTGTAGCTTCATCAACCTCATCTCTGGGTTTCGACTCGTATTTTGAACCCAATACCAGTGACCAAGTATACTCCAACAACCGGAGAATAGGCCACTTTATAAAATCTGGGGACTTGAACAATGCACTCAACGTGTTCGATGAAATGCCTCAGTATGATGTTGTGACATATAACTTGCTTATTTCAGGGCATGGCCGATTTGGGCATCGAGAACAGGCTTTTCGGCTCTATACTGATATGGTTTCACAAGGAATTAGAGAAAGTGCGTCGACGTTTTCTTCTGTGTTGGGGACTTGTACTGATGCAGGACTTTATAGAGAAGGGGTTCAAGTTCATTGCAGGGTGGTGTCTCTTGGGTTTAGCTTGAATATGTTTGTAGGGAGCTCGTTGGTGGACCTTTACTTGCATATGGGGCAAGACAATGTAGCTGTGAAGTTGTTTGATGAGTTGCAGGAGAGAAACTTGGCTGTATGGAATTTGTTGTTACGTGGGTTTTGTGAACTGGGTCGAGTGGATGAGCTGTTTGGGATGTATTATAGGATGAAGTTGGATGGTGTGGATCCAAATGGGCTTAGTTATTGTTATTGGATACGTGCATGTAGTAATGGGAAGCTTTTGGATGAAGGAAAGCAGCTGCATTGTGGTGTTGTGAAGGAGGGATGGTTGGAATCGAATGTGTTTGTTGCCAATGCTCTGGTGGATTTGTACTCTGCTTGTGGGAGTTTGATTGATGCAAGAGAAGCATTTGAAGCTATTCCAGTGGAGGATGTGATTTCGTGGAATTCGATTATTTGGGTCTATACCGAAAATGGTTTGCTGCTTGATGCTCTTGAGTTATTTGCTAGGATGCAGTTTTGGGGGAAGAGGCCATCCATCCGTTCATTTGTTGGGTTTTTGAATTTGGCTAGTAGGATTCGGAATATTCAACTTGGGAAGCAGATACACTCTTATGTTGTGAAATCGGGTTTTGATCATGATGCGAGTTTTCATATTCAATCTGCTCTGATAGATATGTATGGGAAATGCAGTGACATTGAGAGTTCAGTGTGCATATATGAAAATGGTCGTGATAGAAATTTGGAGTGTTGCAACTCATTAATGACATCTTTGCTGCACTGTGGCGTTATTGAGGATGTGGTGGAGATGTTTGGTTTGATGGTTGATGAGGGAATTGGTCTTGATGAAGTTACTCTTTCTACGACACTAAAAGCTTTATCAGTATCTGCTTTTGCAAGTTTAGGCAGCTGCAAATTGCTGCACTGTTGTGCAGTAAAGTCAGGTTTTGAATCTGATATTGCTGTTTCGTGTTCACTAATCGAAGCATATGCAAGATGTGGTCATGTCAAGCTTTCCTGCCAGGTTTTTGATGAATTCCCTTCACCAAATGTCATCTGTTTTACATCGATTATCCATGGATATGCCCGAAATGGAATGGGAGGTGAATGTCTTCATTTGCTACAGGAAATGGTGGCAAAGGGTTTGAAACCTGATAAAGTGACAGTGTTGTGCGTGTTAAGTGGTTGCAACCATTCAGGTCTGGTTGAAGAAGCAAAATTGTTGTTTGATTCAATGGAAATGCTATATGGGGTCTCCCCAGACCGAAAGCATTATTCATGCATGGTTGATCTTTTAGGCCGGGCAGGTTTGCTACATGAAGCTGAAGAGTTGCTGCAACACGGACCCGGAAAAGGTGACTATGTAATGTGGAGCTCATTGTTGCGAAGTTGTAGGGTGCACAAGAATGAAATAGTGGGAAGGCGAACAGTAAAAAGTTTATTGGAGCTTGAGGGAAAGGACCCTGCAATTTTGTTGCAAGCTTCAAACTTCTATTCTGAAATCGGCGAGTTTGACACTGCAATGCAAATCCGAGAATTTGCAATAGCACAGCAAGTAACAAGGGACATAGGAAACATTGTCTATGATGACATTGGCATTCTTGATGAGCTTGAAAGCTTTGACATAGAAGAAGACAATGAGGTGGACGTCTTTGAGATTCCGTCATGGACAAGTGAACGTGGTAGCAAGGTTCTTGTTAATGTGGATAGCTTTGGTGCTACTGGAGATGGAGTTTCTGATGATACTCAGGCTTTTGTAAAAGCTTGGGATATTGCATGCAATACAACAAAAGCTGTTTTCCTGGTACCCCAAGGACGCCGCTATCTAGTAAATGCAACAAGATTTGAAGGGCCATGTGCAGATAGCTTAGTCATCCAGATTGAGGGAACAATCGTAGCACCAGATGATCCTAACAACTGGGATCCAAAATTTCCACGAACATGGCTTGACTTCTATAAATTGAATGGAGTACTTTTCCAAGGGCATGGAGTTATTGATGGATCAGGCAGTAAATGGTGGGCTTCATCCTGCAAAAAGAATAAGACAAATCCTTGCAGGAGTGCTCCTACAGCATTTACTATTGATAGGAGCTCAGCTATAAAGATAAAAGGGCTCACCATCCAGAACAGCCAACAAATGCATTTTACTATCTCTCAGAGCGACTCCGTACGAGTTTATGCAGTCCAAGTCTCGGCTCCAGGAGACAGTCCTAACACTGATGGAATCCATATCACTGCATCTACTAATGTGATTCTCCAAGACTGCAAAATTGGAACAGGAGATGACTGCATCTCAATTGTCAATGCTACATCAAATATTAAGATGAAGAGAATCTTTTGCGGACCAGGACATGGAGTCAGCATCGGAAGTCTAGGGAAGGACAACTCCAGCGGCATAGTGACAAAAATTGTCTTGGATACAGCATACCTCAAGGAGACTACCAATGGCCTCCGCATTAAGACTTGGCAGGGAGGTTCTGGTTATGTTCGTGGGGTCCGTTTCCAAAACGTAAGGATGGAAGATGTAGCAAATCCCATAATCATAGATCAGTTTTACTGTGACTCCCCCAAAGCTTGTCAAAATCAGACATCAGCTGTGCAAATAAGCCAAATCATGTATCGGAACATCTCGGGAATCACAACGAGTAAGAATGCCATGAAGTTTGCCTGCAGTGACACAGTTCCATGCAGCAACCTAGTCCTCAGTAATGTCAACCTGGAGAAGAAGGACGGCACTGTGGAGACATATTGCAACTCTGCCGAAGGCTTCGGGACTGGAGTTGTGCATCCATCAGCAGATTGTCTGAATTCTCATGACAAAGACTTGACAATCATCAATCAGCCTACAGAAGTTAAAGATGCAGATCTCAGCATAGAAGATATTGTGCATACTGAACTCTGA

Protein Analysis

1103

Amino Acids

121.62

Weight (kDa)

5.29

Isoelectric Point (pI)

37.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 78 - 124 1.5e-09 PPR repeat family
PPR_2 PF13041 179 - 226 4.3e-07 PPR repeat family
PPR_2 PF13041 281 - 322 6.6e-06 PPR repeat family
PPR_2 PF13041 486 - 533 2.7e-10 PPR repeat family
PPR PF01535 490 - 519 8.6e-06 PPR repeat
Glyco_hydro_28 PF00295 732 - 1056 5.6e-90 Glycosyl hydrolases family 28
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 176
AatII GACGTC 1 cut(s) 2061
Acc36I ACCTGC 1 cut(s) 1706
Acc65I GGTACC 1 cut(s) 2215
AccB1I GGYRCC 1 cut(s) 2215
AccB7I CCANNNNNTGG 1 cut(s) 2762
AccI GTMKAC 2 cut(s) 144, 344
AccII CGCG 1 cut(s) 16
AciI CCGC 6 cut(s) 14, 16, 2230, 2751, 2802, 2863
AclWI GGATC 6 cut(s) 629, 642, 2312, 2327, 2340, 2419
AcoI YGGCCR 1 cut(s) 268
AcsI RAATTY 8 cut(s) 550, 856, 973, 1150, 1445, 1946, 2339, 3217
AcuI CTGAAG 1 cut(s) 1755
AcyI GRCGYC 2 cut(s) 2058, 2227
AfaI GTAC 5 cut(s) 373, 782, 2217, 2382, 2580
AfiI CCNNNNNNNGG 5 cut(s) 156, 1763, 2293, 2602, 2762
AflIII ACRYGT 1 cut(s) 207
AhdI GACNNNNNGTC 1 cut(s) 2765
AjnI CCWGG 5 cut(s) 1431, 2211, 2608, 2755, 3126
AleI CACNNNNGTG 1 cut(s) 1338
Alw21I GWGCWC 6 cut(s) 25, 461, 1787, 1812, 2476, 2504
Alw26I GTCTC 6 cut(s) 429, 1669, 2605, 2607, 2840, 3146
Alw44I GTGCAC 1 cut(s) 1808
AlwI GGATC 6 cut(s) 629, 642, 2312, 2327, 2340, 2419
AlwNI CAGNNNCTG 1 cut(s) 1298
Ama87I CYCGRG 1 cut(s) 3040
AoxI GGCC 6 cut(s) 166, 268, 941, 1708, 2261, 2857
ApaLI GTGCAC 1 cut(s) 1808
ApeKI GCWGC 9 cut(s) 706, 709, 892, 1186, 1317, 1320, 1330, 1744, 3099
ApoI RAATTY 8 cut(s) 550, 856, 973, 1150, 1445, 1946, 2339, 3217
ArsI GACNNNNNNTTYG 2 cut(s) 101, 133
AseI ATTAAT 1 cut(s) 1172
Asp700I GAANNNNTTC 3 cut(s) 399, 828, 1521
Asp718I GGTACC 1 cut(s) 2215
AspS9I GGNCC 6 cut(s) 469, 1754, 1870, 2261, 2753, 2905
AsuC2I CCSGG 2 cut(s) 1712, 1758
AsuHPI GGTGA 4 cut(s) 1446, 1526, 1778, 2518
AvaI CYCGRG 1 cut(s) 3040
AvaII GGWCC 5 cut(s) 469, 1754, 1870, 2753, 2905
BaeGI GKGCMC 1 cut(s) 1812
BamHI GGATCC 2 cut(s) 634, 2332
BanI GGYRCC 1 cut(s) 2215
BanII GRGCYC 5 cut(s) 25, 461, 1787, 2504, 2526
BbsI GAAGAC 3 cut(s) 48, 1514, 2049
Bbv12I GWGCWC 6 cut(s) 25, 461, 1787, 1812, 2476, 2504
BbvI GCAGC 9 cut(s) 696, 718, 879, 1173, 1307, 1317, 1329, 1731, 3111
BceAI ACGGC 1 cut(s) 3157
BcgI CGANNNNNNTGC 2 cut(s) 1382, 1416
BciT130I CCWGG 5 cut(s) 1433, 2213, 2610, 2757, 3128
BciVI GTATCC 2 cut(s) 657, 2821
BclI TGATCA 1 cut(s) 1045
BcnI CCSGG 2 cut(s) 1712, 1758
BcoDI GTCTC 6 cut(s) 429, 1669, 2605, 2607, 2840, 3146
BfaI CTAG 5 cut(s) 918, 981, 2237, 2783, 3107
BfmI CTRYAG 4 cut(s) 1532, 2478, 3079, 3255
BfuAI ACCTGC 1 cut(s) 1706
BfuI GTATCC 2 cut(s) 657, 2821
BglII AGATCT 1 cut(s) 3274
BlpI GCTNAGC 1 cut(s) 2503
BmcAI AGTACT 1 cut(s) 2382
Bme1390I CCNGG 7 cut(s) 1433, 1712, 1758, 2213, 2610, 2757, 3128
Bme18I GGWCC 5 cut(s) 469, 1754, 1870, 2753, 2905
BmeRI GACNNNNNGTC 1 cut(s) 2765
BmeT110I CYCGRG 1 cut(s) 3040
BmgT120I GGNCC 6 cut(s) 469, 1754, 1870, 2261, 2753, 2905
BmiI GGNNCC 7 cut(s) 636, 1756, 1872, 2217, 2334, 2607, 2906
BmrFI CCNGG 7 cut(s) 1433, 1712, 1758, 2213, 2610, 2757, 3128
BmrI ACTGGG 2 cut(s) 587, 2338
BmuI ACTGGG 2 cut(s) 587, 2338
BpiI GAAGAC 3 cut(s) 48, 1514, 2049
BpmI CTGGAG 5 cut(s) 2154, 2592, 2782, 3149, 3207
Bpu1102I GCTNAGC 1 cut(s) 2503
BpuEI CTTGAG 3 cut(s) 926, 1880, 2825
BpuMI CCSGG 2 cut(s) 1712, 1758
Bsa29I ATCGAT 1 cut(s) 1478
BsaAI YACGTR 2 cut(s) 563, 668
BsaBI GATNNNNATC 1 cut(s) 3273
BsaHI GRCGYC 2 cut(s) 2058, 2227
BsaI GGTCTC 1 cut(s) 1669
BsaJI CCNNGG 4 cut(s) 14, 1486, 2221, 2389
BsaWI WCCGGW 1 cut(s) 156
BsaXI ACNNNNNCTCC 6 cut(s) 722, 752, 2127, 2157, 2957, 2987
Bsc4I CCNNNNNNNGG 5 cut(s) 156, 1763, 2293, 2602, 2762
Bse1I ACTGG 6 cut(s) 132, 582, 833, 2137, 2333, 3190
Bse3DI GCAATG 2 cut(s) 409, 1938
Bse8I GATNNNNATC 1 cut(s) 3273
BseBI CCWGG 5 cut(s) 1433, 2213, 2610, 2757, 3128
BseCI ATCGAT 1 cut(s) 1478
BseDI CCNNGG 4 cut(s) 14, 1486, 2221, 2389
BseJI GATNNNNATC 1 cut(s) 3273
BseLI CCNNNNNNNGG 5 cut(s) 156, 1763, 2293, 2602, 2762
BseMI GCAATG 2 cut(s) 409, 1938
BseMII CTCAG 6 cut(s) 239, 2171, 2517, 2579, 3127, 3292
BseNI ACTGG 6 cut(s) 132, 582, 833, 2137, 2333, 3190
BseSI GKGCMC 1 cut(s) 1812
BseXI GCAGC 9 cut(s) 696, 718, 879, 1173, 1307, 1317, 1329, 1731, 3111
BsgI GTGCAG 4 cut(s) 1172, 1316, 1362, 2289
Bsh1236I CGCG 1 cut(s) 16
BshFI GGCC 6 cut(s) 168, 270, 943, 1710, 2263, 2859
BshNI GGYRCC 1 cut(s) 2215
BshVI ATCGAT 1 cut(s) 1478
BsiHKAI GWGCWC 6 cut(s) 25, 461, 1787, 1812, 2476, 2504
BsiHKCI CYCGRG 1 cut(s) 3040
BsiSI CCGG 3 cut(s) 157, 1711, 1758
BsiWI CGTACG 1 cut(s) 2578
BslFI GGGAC 4 cut(s) 200, 379, 1988, 3196
BslI CCNNNNNNNGG 5 cut(s) 156, 1763, 2293, 2602, 2762
BsmAI GTCTC 6 cut(s) 429, 1669, 2605, 2607, 2840, 3146
BsmFI GGGAC 4 cut(s) 200, 379, 1988, 3196
BsmI GAATGC 2 cut(s) 2007, 3067
BsnI GGCC 6 cut(s) 168, 270, 943, 1710, 2263, 2859
Bso31I GGTCTC 1 cut(s) 1669
BsoBI CYCGRG 1 cut(s) 3040
Bsp1286I GDGCHC 7 cut(s) 25, 461, 1787, 1812, 2476, 2504, 2526
Bsp143I GATC 9 cut(s) 47, 634, 1045, 1699, 2317, 2332, 2411, 2956, 3274
Bsp1720I GCTNAGC 1 cut(s) 2503
Bsp19I CCATGG 1 cut(s) 1486
BspACI CCGC 6 cut(s) 14, 16, 2230, 2751, 2802, 2863
BspANI GGCC 6 cut(s) 168, 270, 943, 1710, 2263, 2859
BspCNI CTCAG 6 cut(s) 238, 2170, 2516, 2578, 3126, 3291
BspDI ATCGAT 1 cut(s) 1478
BspFNI CGCG 1 cut(s) 16
BspHI TCATGA 2 cut(s) 1048, 3223
BspLI GGNNCC 7 cut(s) 636, 1756, 1872, 2217, 2334, 2607, 2906
BspMAI CTGCAG 1 cut(s) 3083
BspMI ACCTGC 1 cut(s) 1706
BspPI GGATC 6 cut(s) 629, 642, 2312, 2327, 2340, 2419
BspT107I GGYRCC 1 cut(s) 2215
BspTNI GGTCTC 1 cut(s) 1669
BsrDI GCAATG 2 cut(s) 409, 1938
BsrI ACTGG 6 cut(s) 132, 582, 833, 2137, 2333, 3190
BssECI CCNNGG 4 cut(s) 14, 1486, 2221, 2389
BssMI GATC 9 cut(s) 47, 634, 1045, 1699, 2317, 2332, 2411, 2956, 3274
BssNAI GTATAC 1 cut(s) 145
BssNI GRCGYC 2 cut(s) 2058, 2227
BssT1I CCWWGG 3 cut(s) 1486, 2221, 2389
Bst1107I GTATAC 1 cut(s) 145
Bst2UI CCWGG 5 cut(s) 1433, 2213, 2610, 2757, 3128
Bst4CI ACNGT 8 cut(s) 1193, 1337, 1576, 1840, 2618, 2969, 3091, 3148
Bst6I CTCTTC 3 cut(s) 932, 1731, 2732
BstACI GRCGYC 2 cut(s) 2058, 2227
BstBAI YACGTR 2 cut(s) 563, 668
BstC8I GCNNGC 3 cut(s) 1890, 2188, 3079
BstDEI CTNAG 8 cut(s) 225, 647, 2157, 2278, 2503, 2565, 3113, 3278
BstDSI CCRYGG 2 cut(s) 14, 1486
BstFNI CGCG 1 cut(s) 16
BstKTI GATC 9 cut(s) 50, 637, 1048, 1702, 2320, 2335, 2414, 2959, 3277
BstMAI GTCTC 6 cut(s) 429, 1669, 2605, 2607, 2840, 3146
BstMBI GATC 9 cut(s) 47, 634, 1045, 1699, 2317, 2332, 2411, 2956, 3274
BstMWI GCNNNNNNNGC 4 cut(s) 487, 815, 824, 2480
BstNI CCWGG 5 cut(s) 1433, 2213, 2610, 2757, 3128
BstNSI RCATGY 2 cut(s) 675, 2190
BstSCI CCNGG 7 cut(s) 1431, 1710, 1756, 2211, 2608, 2755, 3126
BstSFI CTRYAG 4 cut(s) 1532, 2478, 3079, 3255
BstSLI GKGCMC 1 cut(s) 1812
BstUI CGCG 1 cut(s) 16
BstV1I GCAGC 9 cut(s) 696, 718, 879, 1173, 1307, 1317, 1329, 1731, 3111
BstV2I GAAGAC 3 cut(s) 48, 1514, 2049
BstX2I RGATCY 3 cut(s) 634, 2332, 3274
BstXI CCANNNNNNTGG 3 cut(s) 769, 2352, 2396
BstYI RGATCY 3 cut(s) 634, 2332, 3274
BstZ17I GTATAC 1 cut(s) 145
Bsu15I ATCGAT 1 cut(s) 1478
BsuI GTATCC 2 cut(s) 657, 2821
BsuRI GGCC 6 cut(s) 168, 270, 943, 1710, 2263, 2859
BsuTUI ATCGAT 1 cut(s) 1478
BtgI CCRYGG 2 cut(s) 14, 1486
BtsI GCAGTG 4 cut(s) 1108, 1926, 2643, 3088
BveI ACCTGC 1 cut(s) 1706
Cac8I GCNNGC 3 cut(s) 1890, 2188, 3079
CaiI CAGNNNCTG 1 cut(s) 1298
CciI TCATGA 2 cut(s) 1048, 3223
Cfr13I GGNCC 6 cut(s) 469, 1754, 1870, 2261, 2753, 2905
Cfr42I CCGCGG 1 cut(s) 17
ClaI ATCGAT 1 cut(s) 1478
CseI GACGC 2 cut(s) 330, 2235
Csp6I GTAC 5 cut(s) 372, 781, 2216, 2381, 2579
CviQI GTAC 5 cut(s) 372, 781, 2216, 2381, 2579
DdeI CTNAG 8 cut(s) 225, 647, 2157, 2278, 2503, 2565, 3113, 3278
DpnI GATC 9 cut(s) 49, 636, 1047, 1701, 2319, 2334, 2413, 2958, 3276
DpnII GATC 9 cut(s) 47, 634, 1045, 1699, 2317, 2332, 2411, 2956, 3274
DriI GACNNNNNGTC 1 cut(s) 2765
EaeI YGGCCR 1 cut(s) 268
Eam1104I CTCTTC 3 cut(s) 932, 1731, 2732
Eam1105I GACNNNNNGTC 1 cut(s) 2765
EarI CTCTTC 3 cut(s) 932, 1731, 2732
Ecl136II GAGCTC 4 cut(s) 23, 459, 1785, 2502
Eco130I CCWWGG 3 cut(s) 1486, 2221, 2389
Eco24I GRGCYC 5 cut(s) 25, 461, 1787, 2504, 2526
Eco31I GGTCTC 1 cut(s) 1669
Eco47I GGWCC 5 cut(s) 469, 1754, 1870, 2753, 2905
Eco53kI GAGCTC 4 cut(s) 23, 459, 1785, 2502
Eco57I CTGAAG 1 cut(s) 1755
Eco88I CYCGRG 1 cut(s) 3040
EcoICRI GAGCTC 4 cut(s) 23, 459, 1785, 2502
EcoO109I RGGNCCY 1 cut(s) 1870
EcoRI GAATTC 3 cut(s) 856, 1445, 3217
EcoRII CCWGG 5 cut(s) 1431, 2211, 2608, 2755, 3126
EcoT14I CCWWGG 3 cut(s) 1486, 2221, 2389
EcoT22I ATGCAT 2 cut(s) 1694, 2553
EcoT38I GRGCYC 5 cut(s) 25, 461, 1787, 2504, 2526
ErhI CCWWGG 3 cut(s) 1486, 2221, 2389
FalI AAGNNNNNCTT 4 cut(s) 1251, 1283, 2729, 2761
FaqI GGGAC 4 cut(s) 200, 379, 1988, 3196
FauNDI CATATG 2 cut(s) 483, 1399
FbaI TGATCA 1 cut(s) 1045
FblI GTMKAC 2 cut(s) 144, 344
FriOI GRGCYC 5 cut(s) 25, 461, 1787, 2504, 2526
FspBI CTAG 5 cut(s) 918, 981, 2237, 2783, 3107
GsuI CTGGAG 5 cut(s) 2154, 2592, 2782, 3149, 3207
HaeIII GGCC 6 cut(s) 168, 270, 943, 1710, 2263, 2859
HapII CCGG 3 cut(s) 157, 1711, 1758
HgaI GACGC 2 cut(s) 330, 2235
Hin1I GRCGYC 2 cut(s) 2058, 2227
HincII GTYRAC 2 cut(s) 345, 3124
HindII GTYRAC 2 cut(s) 345, 3124
HindIII AAGCTT 7 cut(s) 686, 1284, 1421, 1890, 2026, 2172, 2982
HpaII CCGG 3 cut(s) 157, 1711, 1758
HphI GGTGA 4 cut(s) 1446, 1526, 1778, 2518
Hpy166II GTNNAC 9 cut(s) 145, 345, 469, 575, 1385, 1810, 2056, 2087, 3124
Hpy8I GTNNAC 9 cut(s) 145, 345, 469, 575, 1385, 1810, 2056, 2087, 3124
Hpy99I CGWCG 2 cut(s) 346, 349
HpyAV CCTTC 9 cut(s) 389, 692, 721, 1461, 1824, 2252, 2782, 3130, 3167
HpyCH4III ACNGT 8 cut(s) 1193, 1337, 1576, 1840, 2618, 2969, 3091, 3148
HpyCH4IV ACGT 7 cut(s) 207, 347, 562, 667, 2058, 2089, 2919
HpyF10VI GCNNNNNNNGC 4 cut(s) 487, 815, 824, 2480
HpyF3I CTNAG 8 cut(s) 225, 647, 2157, 2278, 2503, 2565, 3113, 3278
HpySE526I ACGT 7 cut(s) 207, 347, 562, 667, 2058, 2089, 2919
Hsp92I GRCGYC 2 cut(s) 2058, 2227
KpnI GGTACC 1 cut(s) 2219
Ksp22I TGATCA 1 cut(s) 1045
KspI CCGCGG 1 cut(s) 17
Kzo9I GATC 9 cut(s) 47, 634, 1045, 1699, 2317, 2332, 2411, 2956, 3274
LmnI GCTCC 6 cut(s) 456, 1782, 1855, 2479, 2499, 2611
Lsp1109I GCAGC 9 cut(s) 696, 718, 879, 1173, 1307, 1317, 1329, 1731, 3111
MaeI CTAG 5 cut(s) 918, 981, 2237, 2783, 3107
MaeII ACGT 7 cut(s) 207, 347, 562, 667, 2058, 2089, 2919
MalI GATC 9 cut(s) 49, 636, 1047, 1701, 2319, 2334, 2413, 2958, 3276
MboI GATC 9 cut(s) 47, 634, 1045, 1699, 2317, 2332, 2411, 2956, 3274
MfeI CAATTG 1 cut(s) 2706
MflI RGATCY 3 cut(s) 634, 2332, 3274
MhlI GDGCHC 7 cut(s) 25, 461, 1787, 1812, 2476, 2504, 2526
MlyI GAGTC 4 cut(s) 104, 2567, 2775, 2966
MmeI TCCRAC 3 cut(s) 174, 603, 720
Mph1103I ATGCAT 2 cut(s) 1694, 2553
MroXI GAANNNNTTC 3 cut(s) 399, 828, 1521
MseI TTAA 6 cut(s) 1172, 1589, 2109, 2730, 2868, 3264
MslI CAYNNNNRTG 7 cut(s) 717, 1023, 1338, 1491, 1815, 1931, 2350
MspA1I CMGCKG 5 cut(s) 16, 709, 1320, 2802, 3005
MspI CCGG 3 cut(s) 157, 1711, 1758
MspR9I CCNGG 7 cut(s) 1433, 1712, 1758, 2213, 2610, 2757, 3128
MunI CAATTG 1 cut(s) 2706
Mva1269I GAATGC 2 cut(s) 2007, 3067
MvaI CCWGG 5 cut(s) 1433, 2213, 2610, 2757, 3128
MvnI CGCG 1 cut(s) 16
MwoI GCNNNNNNNGC 4 cut(s) 487, 815, 824, 2480
NciI CCSGG 2 cut(s) 1712, 1758
NcoI CCATGG 1 cut(s) 1486
NdeI CATATG 2 cut(s) 483, 1399
NdeII GATC 9 cut(s) 47, 634, 1045, 1699, 2317, 2332, 2411, 2956, 3274
NlaIV GGNNCC 7 cut(s) 636, 1756, 1872, 2217, 2334, 2607, 2906
NmeAIII GCCGAG 1 cut(s) 2582
NmuCI GTSAC 8 cut(s) 134, 238, 1103, 1570, 1766, 2809, 2969, 3083
NsiI ATGCAT 2 cut(s) 1694, 2553
NspI RCATGY 2 cut(s) 675, 2190
OliI CACNNNNGTG 1 cut(s) 1338
PaeI GCATGC 1 cut(s) 2190
PagI TCATGA 2 cut(s) 1048, 3223
PcsI WCGNNNNNNNCGW 3 cut(s) 43, 857, 2905
PctI GAATGC 2 cut(s) 2007, 3067
PdmI GAANNNNTTC 3 cut(s) 399, 828, 1521
PfeI GAWTC 9 cut(s) 743, 988, 1361, 1640, 2068, 2634, 2662, 2742, 3045
Pfl23II CGTACG 1 cut(s) 2578
PflMI CCANNNNNTGG 1 cut(s) 2762
PfoI TCCNGGA 1 cut(s) 2608
PleI GAGTC 4 cut(s) 104, 2567, 2774, 2966
PpsI GAGTC 4 cut(s) 104, 2567, 2774, 2966
Ppu21I YACGTR 2 cut(s) 563, 668
PpuMI RGGWCCY 1 cut(s) 1870
PshBI ATTAAT 1 cut(s) 1172
PsiI TTATAA 1 cut(s) 176
Psp124BI GAGCTC 4 cut(s) 25, 461, 1787, 2504
Psp5II RGGWCCY 1 cut(s) 1870
Psp6I CCWGG 5 cut(s) 1431, 2211, 2608, 2755, 3126
PspGI CCWGG 5 cut(s) 1431, 2211, 2608, 2755, 3126
PspLI CGTACG 1 cut(s) 2578
PspN4I GGNNCC 7 cut(s) 636, 1756, 1872, 2217, 2334, 2607, 2906
PspPI GGNCC 6 cut(s) 469, 1754, 1870, 2261, 2753, 2905
PspPPI RGGWCCY 1 cut(s) 1870
PstI CTGCAG 1 cut(s) 3083
PstNI CAGNNNCTG 1 cut(s) 1298
PsuI RGATCY 3 cut(s) 634, 2332, 3274
PvuII CAGCTG 3 cut(s) 709, 1320, 3005
RsaI GTAC 5 cut(s) 373, 782, 2217, 2382, 2580
RsaNI GTAC 5 cut(s) 372, 781, 2216, 2381, 2579
RseI CAYNNNNRTG 7 cut(s) 717, 1023, 1338, 1491, 1815, 1931, 2350
SacI GAGCTC 4 cut(s) 25, 461, 1787, 2504
SacII CCGCGG 1 cut(s) 17
SalI GTCGAC 1 cut(s) 343
SaqAI TTAA 6 cut(s) 1172, 1589, 2109, 2730, 2868, 3264
Sau3AI GATC 9 cut(s) 47, 634, 1045, 1699, 2317, 2332, 2411, 2956, 3274
Sau96I GGNCC 6 cut(s) 469, 1754, 1870, 2261, 2753, 2905
ScaI AGTACT 1 cut(s) 2382
SchI GAGTC 4 cut(s) 104, 2567, 2775, 2966
ScrFI CCNGG 7 cut(s) 1433, 1712, 1758, 2213, 2610, 2757, 3128
SduI GDGCHC 7 cut(s) 25, 461, 1787, 1812, 2476, 2504, 2526
SfcI CTRYAG 4 cut(s) 1532, 2478, 3079, 3255
Sfr303I CCGCGG 1 cut(s) 17
SgrBI CCGCGG 1 cut(s) 17
SgrDI CGTCGACG 1 cut(s) 343
SinI GGWCC 5 cut(s) 469, 1754, 1870, 2753, 2905
SmiMI CAYNNNNRTG 7 cut(s) 717, 1023, 1338, 1491, 1815, 1931, 2350
SmlI CTYRAG 3 cut(s) 905, 1859, 2840
SmoI CTYRAG 3 cut(s) 905, 1859, 2840
SphI GCATGC 1 cut(s) 2190
SsiI CCGC 6 cut(s) 14, 16, 2230, 2751, 2802, 2863
SspI AATATT 2 cut(s) 997, 2728
SspMI CTAG 5 cut(s) 918, 981, 2237, 2783, 3107
SstI GAGCTC 4 cut(s) 25, 461, 1787, 2504
StyD4I CCNGG 7 cut(s) 1431, 1710, 1756, 2211, 2608, 2755, 3126
StyI CCWWGG 3 cut(s) 1486, 2221, 2389
TaaI ACNGT 8 cut(s) 1193, 1337, 1576, 1840, 2618, 2969, 3091, 3148
TaiI ACGT 7 cut(s) 210, 350, 565, 670, 2061, 2092, 2922
TaqII GACCGA 1 cut(s) 1689
TatI WGTACW 3 cut(s) 371, 780, 2380
TauI GCSGC 2 cut(s) 2232, 2805
TfiI GAWTC 9 cut(s) 743, 988, 1361, 1640, 2068, 2634, 2662, 2742, 3045
Tru1I TTAA 6 cut(s) 1172, 1589, 2109, 2730, 2868, 3264
Tru9I TTAA 6 cut(s) 1172, 1589, 2109, 2730, 2868, 3264
TseFI GTSAC 8 cut(s) 134, 238, 1103, 1570, 1766, 2809, 2969, 3083
TseI GCWGC 9 cut(s) 706, 709, 892, 1186, 1317, 1320, 1330, 1744, 3099
Tsp45I GTSAC 8 cut(s) 134, 238, 1103, 1570, 1766, 2809, 2969, 3083
TspGWI ACGGA 5 cut(s) 941, 1767, 2061, 2566, 2897
Van91I CCANNNNNTGG 1 cut(s) 2762
VneI GTGCAC 1 cut(s) 1808
VpaK11BI GGWCC 5 cut(s) 469, 1754, 1870, 2753, 2905
VspI ATTAAT 1 cut(s) 1172
XapI RAATTY 8 cut(s) 550, 856, 973, 1150, 1445, 1946, 2339, 3217
XceI RCATGY 2 cut(s) 675, 2190
XcmI CCANNNNNNNNNTGG 1 cut(s) 769
XmiI GTMKAC 2 cut(s) 144, 344
XmnI GAANNNNTTC 3 cut(s) 399, 828, 1521
XspI CTAG 5 cut(s) 918, 981, 2237, 2783, 3107
ZraI GACGTC 1 cut(s) 2059
ZrmI AGTACT 1 cut(s) 2382
Zsp2I ATGCAT 2 cut(s) 1694, 2553
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.