Rw5G004440

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
4682598 .. 4686216
3619 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G004440.1

Sequence Viewer

Length: 2373 bp
ATGTTCTTTTTATTCATCTTAATCTTGCTTCCACCACATTATCATTGTTCTCAAGTTTATAACATCACTCCTTTGCAACCGTTAGTACAGGGCGACTCTCTTGTCTCCCCTACAGGCATTTTCGAGTTAGGCTTCTTCAGTCCTAATGGTTCTGCTAATAAGTACGTGGGGTTGTGGCACAAGAATATATTCCCCCGTAAAGTAGTGTGGGTGGCCAACAGGGAAAAGCCCATTGCAGTTACAGGCTCATTGGCGAGTTTGAGAATCAGCAGCAATGGGAGTCTGGAGCTTGTAGATGGGAATCAGAATTCTGTGTGGTCAACCAATGTTACTATACATGTTTCATCATCTAATACTAGTTCATTTGCTGCAGTTCTTTCAGATGAAGGAAACTTTGTTGTCAAAGATGTTACTAGAGCTGGTCAATCAATATGGCAGAGCTTTGATTATCCTGGTGACACTATGCTACCAACCCAGCGGCTGGGATACAATACTAAATCTAAAAAGGGCACTATCTTGACTGCCTGGAAAAGTGAGAGTGATCCATCTAGTGGGATATATACAGCTGAAGGCGGACGGGCAACAGAGGTGCCAGCACAAGTGATCATTTGGATTAATCGATCAACTCCCTTCTGGAGAAGTGGGCCATGGGATAAATCAAAGTTCATCGGCATGCCAGATATGGATGATCGATATCTTAATGGATTTGAATATTTCTCACTTAAATTATTTGACGCTTTCGCAGCATATATAGACATCTCTTCACAGGGAAAACCAAAGCTTATGTATTCAGACAATGGTAGGAACTGGTCAATCTACTGGGAAACACTAGAGAATCGATGTGATATCTATGGAGCGTGTGGGCCTTTTGGGGTTTGTAAAGCTTCTGAATCTCCAATCTGCAAGTGTTTGAAAGGGTTTGTACCAAAGTCACACCACGAATGGAGCAAAGGAGACTGGACCGGAGGGTGCGTAAGGAAAACCGAATTGTTCTGTGATAGACAAAAAACGAAGAAGTCAGTACCATTGCAAGGAAAAAAAGATGATAATGATGATGGGTTCTGGAAGATCGTTGGGGCAAAAGTACCAGATTATTATGAGTATATCACATCTTTCAATGCTCAATATACGCCAAATGAATGCAAGACACAGTGTTTAAATAATTGTTCTTGCTTGGCTTATGCATATGTTAATAATATTGGTTGTTTGGTCTGGTCCAAAGACCTCAATGATATAAGAAGTGAAGGAAAGCCAATTAAGTTGATTGCCAGCCTTACAGCAATTGGTTTAATGATTGTCTTGGTTGCCATAGTGTTCGGTTTGCACAGGTTGCGAGCTAACCAAAAGGGATCAAGTCCAACTTCTAGGGATACTCTTCTAGAATATATTGGAAAATATGATCCATCAGAGCTATTGATCTATGATTTTGATACCATGTCAACTGCTACAGACAATTTCAGCATTACAAACAAACTCGGGCAAGGAGGCTTTGGTCCTGTTTATAAGGGTATACTACAAGATGGGAAGGAAATAGCTGTAAAAAGACTATCTAGTAGCTCAGGACAAGGCATTGAAGAGTTCAAGAATGAGATGCTGGTGATGGGTTGCTGCGTTAAAGAAGATGAGAAGTTGCTGGTTTATGAGTTCATGCCAAACAAAAGCTTGGATACGTTTCTATTCGATCCAATGAGGAGAGGAGAGCTTGATTGGGACAGACGCTTTAATATTATTCAGGGTATTGCTAGAGGGCTTCTTTATCTCCATCATGATTCCTATGTGAAGGTAATACATAGAGACTTGAAAGTCAGCAACATTCTCCTAGATGAAAAAATGAACCCAAAAATCTCAGATTTTGGATTGGCACGAATAATTGACGGAACACAGTGTGTAGAAAATACTCAAAAGGTCGTGGGAACACGTGGCTATATGTCTCCAGAGTATGCCATGGGTGGGATATTTTCTGAAAAATCTGATGTCTACAGTTTCGGGGTTTTGGTATTGGAGATTATTAGCAGCGAGAAGAATAACAACTTCTTTTTATATGACCAACAACTAGGCTTTCTAGCCCATGCATGGAACTTGTGGTCTGAAGGTAGGGGTTTGGAGTTGGTGGATGAAGTATTGGGTGATTCATATTGCTCATCAGAAGTATTGAAATGTGTGCACATTGGGCTTCTTTGTGTACAGGATAATGCTGCAGATAGGCCTACCATGAAGGATATTACTTTAATGCTAAGTAGCAAGATAGATGGTCTGCAACCTAAGAGGCCTTTATTCACTATCCAGAACTCATTTTCTCATCCTCAACTACTATATGAACGTACCAAGTCCTCCACAAGTGAAGCTACCATTACAGTGATTGAAGGACGATAA

Protein Analysis

790

Amino Acids

88.57

Weight (kDa)

6.53

Isoelectric Point (pI)

38.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 68 - 177 1.9e-29 D-mannose binding lectin
S_locus_glycop PF00954 212 - 311 1.1e-24 S-locus glycoprotein domain
PAN_2 PF08276 350 - 412 6.3e-16 PAN-like domain
Pkinase PF00069 487 - 673 7.6e-34 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 488 - 742 7.2e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 60, 1503
AasI GACNNNNNNGTC 2 cut(s) 101, 1802
AccB1I GGYRCC 1 cut(s) 589
AccB7I CCANNNNNTGG 2 cut(s) 481, 551
AccI GTMKAC 2 cut(s) 1510, 1977
AciI CCGC 2 cut(s) 478, 573
AclWI GGATC 4 cut(s) 536, 1357, 1394, 1676
AcoI YGGCCR 1 cut(s) 213
AcsI RAATTY 1 cut(s) 307
AcuI CTGAAG 3 cut(s) 121, 588, 2109
AcvI CACGTG 1 cut(s) 1919
AdeI CACNNNGTG 1 cut(s) 1886
AfaI GTAC 7 cut(s) 87, 164, 924, 1023, 1086, 2184, 2323
AfiI CCNNNNNNNGG 5 cut(s) 481, 551, 1031, 1950, 2073
AflIII ACRYGT 2 cut(s) 337, 1916
AgsI TTSAA 8 cut(s) 710, 913, 1117, 1574, 1582, 1801, 2155, 2363
AhlI ACTAGT 1 cut(s) 356
AjnI CCWGG 2 cut(s) 451, 524
Alw21I GWGCWC 1 cut(s) 2166
Alw26I GTCTC 4 cut(s) 109, 948, 1788, 1935
Alw44I GTGCAC 1 cut(s) 2162
AlwI GGATC 4 cut(s) 536, 1357, 1394, 1676
AlwNI CAGNNNCTG 1 cut(s) 481
Ama87I CYCGRG 1 cut(s) 1475
AoxI GGCC 5 cut(s) 213, 644, 863, 2204, 2267
ApaLI GTGCAC 1 cut(s) 2162
ApeKI GCWGC 6 cut(s) 270, 368, 743, 1608, 2013, 2195
ApoI RAATTY 1 cut(s) 307
AseI ATTAAT 1 cut(s) 615
Asp700I GAANNNNTTC 1 cut(s) 188
AspS9I GGNCC 5 cut(s) 644, 863, 960, 1215, 1493
AsuHPI GGTGA 3 cut(s) 467, 1609, 2138
AvaI CYCGRG 1 cut(s) 1475
AvaII GGWCC 3 cut(s) 960, 1215, 1493
BaeGI GKGCMC 2 cut(s) 512, 2166
BalI TGGCCA 1 cut(s) 215
BanI GGYRCC 1 cut(s) 589
BbrPI CACGTG 1 cut(s) 1919
Bbv12I GWGCWC 1 cut(s) 2166
BbvI GCAGC 6 cut(s) 282, 355, 755, 1595, 2025, 2182
BccI CCATC 8 cut(s) 290, 553, 1049, 1411, 1514, 1594, 1770, 2243
BciT130I CCWGG 2 cut(s) 453, 526
BciVI GTATCC 3 cut(s) 479, 1363, 1660
BclI TGATCA 1 cut(s) 603
BcoDI GTCTC 4 cut(s) 109, 948, 1788, 1935
BcuI ACTAGT 1 cut(s) 356
BfmI CTRYAG 5 cut(s) 111, 369, 1446, 1978, 2196
BfuI GTATCC 3 cut(s) 479, 1363, 1660
BisI GCNGC 7 cut(s) 271, 369, 479, 744, 1609, 2014, 2196
BlsI GCNGC 7 cut(s) 272, 370, 480, 745, 1610, 2015, 2197
Bme1390I CCNGG 2 cut(s) 453, 526
Bme18I GGWCC 3 cut(s) 960, 1215, 1493
BmeT110I CYCGRG 1 cut(s) 1475
BmgT120I GGNCC 5 cut(s) 644, 863, 960, 1215, 1493
BmiI GGNNCC 1 cut(s) 591
BmrFI CCNGG 2 cut(s) 453, 526
BmrI ACTGGG 1 cut(s) 829
BmsI GCATC 1 cut(s) 1581
BmuI ACTGGG 1 cut(s) 829
BpmI CTGGAG 3 cut(s) 305, 655, 1917
Bpu10I CCTNAGC 1 cut(s) 1558
BpuEI CTTGAG 1 cut(s) 36
Bsa29I ATCGAT 3 cut(s) 619, 691, 838
BsaAI YACGTR 2 cut(s) 166, 1919
BsaBI GATNNNNATC 2 cut(s) 300, 693
BsaJI CCNNGG 2 cut(s) 647, 1944
BsaWI WCCGGW 1 cut(s) 962
BsaXI ACNNNNNCTCC 2 cut(s) 957, 987
Bsc4I CCNNNNNNNGG 5 cut(s) 481, 551, 1031, 1950, 2073
Bse1I ACTGG 3 cut(s) 812, 824, 962
Bse3DI GCAATG 3 cut(s) 231, 280, 1025
Bse8I GATNNNNATC 2 cut(s) 300, 693
BseBI CCWGG 2 cut(s) 453, 526
BseCI ATCGAT 3 cut(s) 619, 691, 838
BseDI CCNNGG 2 cut(s) 647, 1944
BseGI GGATG 3 cut(s) 691, 2119, 2299
BseJI GATNNNNATC 2 cut(s) 300, 693
BseLI CCNNNNNNNGG 5 cut(s) 481, 551, 1031, 1950, 2073
BseMI GCAATG 3 cut(s) 231, 280, 1025
BseMII CTCAG 2 cut(s) 1572, 1860
BseNI ACTGG 3 cut(s) 812, 824, 962
BseRI GAGGAG 2 cut(s) 1705, 1710
BseSI GKGCMC 2 cut(s) 512, 2166
BseXI GCAGC 6 cut(s) 282, 355, 755, 1595, 2025, 2182
BseYI CCCAGC 2 cut(s) 474, 481
BshFI GGCC 5 cut(s) 215, 646, 865, 2206, 2269
BshNI GGYRCC 1 cut(s) 589
BshVI ATCGAT 3 cut(s) 619, 691, 838
BsiHKAI GWGCWC 1 cut(s) 2166
BsiHKCI CYCGRG 1 cut(s) 1475
BsiSI CCGG 1 cut(s) 963
BslFI GGGAC 1 cut(s) 1724
BslI CCNNNNNNNGG 5 cut(s) 481, 551, 1031, 1950, 2073
BsmAI GTCTC 4 cut(s) 109, 948, 1788, 1935
BsmFI GGGAC 1 cut(s) 1724
BsmI GAATGC 1 cut(s) 1145
BsnI GGCC 5 cut(s) 215, 646, 865, 2206, 2269
BsoBI CYCGRG 1 cut(s) 1475
Bsp1286I GDGCHC 2 cut(s) 512, 2166
Bsp1407I TGTACA 1 cut(s) 2182
Bsp143I GATC 9 cut(s) 541, 603, 620, 688, 1068, 1349, 1399, 1416, 1681
Bsp19I CCATGG 2 cut(s) 647, 1944
BspACI CCGC 2 cut(s) 478, 573
BspANI GGCC 5 cut(s) 215, 646, 865, 2206, 2269
BspCNI CTCAG 2 cut(s) 1571, 1859
BspDI ATCGAT 3 cut(s) 619, 691, 838
BspHI TCATGA 1 cut(s) 1765
BspLI GGNNCC 1 cut(s) 591
BspMAI CTGCAG 2 cut(s) 373, 2200
BspPI GGATC 4 cut(s) 536, 1357, 1394, 1676
BspT107I GGYRCC 1 cut(s) 589
BsrDI GCAATG 3 cut(s) 231, 280, 1025
BsrGI TGTACA 1 cut(s) 2182
BsrI ACTGG 3 cut(s) 812, 824, 962
BssECI CCNNGG 2 cut(s) 647, 1944
BssMI GATC 9 cut(s) 541, 603, 620, 688, 1068, 1349, 1399, 1416, 1681
BssNAI GTATAC 1 cut(s) 1511
BssT1I CCWWGG 2 cut(s) 647, 1944
Bst1107I GTATAC 1 cut(s) 1511
Bst2UI CCWGG 2 cut(s) 453, 526
Bst4CI ACNGT 5 cut(s) 81, 1152, 1884, 1982, 2356
Bst6I CTCTTC 3 cut(s) 766, 1380, 1569
BstAPI GCANNNNNTGC 1 cut(s) 1330
BstAUI TGTACA 1 cut(s) 2182
BstBAI YACGTR 2 cut(s) 166, 1919
BstC8I GCNNGC 4 cut(s) 594, 674, 1270, 1335
BstDEI CTNAG 4 cut(s) 1558, 1846, 2234, 2262
BstDSI CCRYGG 2 cut(s) 647, 1944
BstF5I GGATG 3 cut(s) 691, 2119, 2299
BstKTI GATC 9 cut(s) 544, 606, 623, 691, 1071, 1352, 1402, 1419, 1684
BstMAI GTCTC 4 cut(s) 109, 948, 1788, 1935
BstMBI GATC 9 cut(s) 541, 603, 620, 688, 1068, 1349, 1399, 1416, 1681
BstMWI GCNNNNNNNGC 3 cut(s) 743, 1330, 2170
BstNI CCWGG 2 cut(s) 453, 526
BstNSI RCATGY 2 cut(s) 341, 676
BstSCI CCNGG 2 cut(s) 451, 524
BstSFI CTRYAG 5 cut(s) 111, 369, 1446, 1978, 2196
BstSLI GKGCMC 2 cut(s) 512, 2166
BstV1I GCAGC 6 cut(s) 282, 355, 755, 1595, 2025, 2182
BstZ17I GTATAC 1 cut(s) 1511
Bsu15I ATCGAT 3 cut(s) 619, 691, 838
BsuI GTATCC 3 cut(s) 479, 1363, 1660
BsuRI GGCC 5 cut(s) 215, 646, 865, 2206, 2269
BsuTUI ATCGAT 3 cut(s) 619, 691, 838
BtgI CCRYGG 2 cut(s) 647, 1944
BtsCI GGATG 3 cut(s) 691, 2119, 2299
BtsIMutI CAGTG 3 cut(s) 1157, 1889, 2361
Cac8I GCNNGC 4 cut(s) 594, 674, 1270, 1335
CaiI CAGNNNCTG 1 cut(s) 481
CciI TCATGA 1 cut(s) 1765
Cfr13I GGNCC 5 cut(s) 644, 863, 960, 1215, 1493
ClaI ATCGAT 3 cut(s) 619, 691, 838
CseI GACGC 2 cut(s) 743, 1725
Csp6I GTAC 7 cut(s) 86, 163, 923, 1022, 1085, 2183, 2322
CviQI GTAC 7 cut(s) 86, 163, 923, 1022, 1085, 2183, 2322
DdeI CTNAG 4 cut(s) 1558, 1846, 2234, 2262
DpnI GATC 9 cut(s) 543, 605, 622, 690, 1070, 1351, 1401, 1418, 1683
DpnII GATC 9 cut(s) 541, 603, 620, 688, 1068, 1349, 1399, 1416, 1681
DraI TTTAAA 1 cut(s) 1158
DraIII CACNNNGTG 1 cut(s) 1886
DrdI GACNNNNNNGTC 2 cut(s) 101, 1802
DseDI GACNNNNNNGTC 2 cut(s) 101, 1802
EaeI YGGCCR 1 cut(s) 213
Eam1104I CTCTTC 3 cut(s) 766, 1380, 1569
EarI CTCTTC 3 cut(s) 766, 1380, 1569
EciI GGCGGA 1 cut(s) 588
Eco130I CCWWGG 2 cut(s) 647, 1944
Eco147I AGGCCT 2 cut(s) 2206, 2269
Eco32I GATATC 2 cut(s) 695, 847
Eco47I GGWCC 3 cut(s) 960, 1215, 1493
Eco57I CTGAAG 3 cut(s) 121, 588, 2109
Eco72I CACGTG 1 cut(s) 1919
Eco88I CYCGRG 1 cut(s) 1475
EcoRI GAATTC 1 cut(s) 307
EcoRII CCWGG 2 cut(s) 451, 524
EcoRV GATATC 2 cut(s) 695, 847
EcoT14I CCWWGG 2 cut(s) 647, 1944
EcoT22I ATGCAT 2 cut(s) 1186, 2074
ErhI CCWWGG 2 cut(s) 647, 1944
FalI AAGNNNNNCTT 2 cut(s) 1345, 1377
FaqI GGGAC 1 cut(s) 1724
FauNDI CATATG 1 cut(s) 1186
FbaI TGATCA 1 cut(s) 603
FblI GTMKAC 2 cut(s) 1510, 1977
Fnu4HI GCNGC 7 cut(s) 271, 369, 479, 744, 1609, 2014, 2196
FokI GGATG 3 cut(s) 698, 2126, 2286
Fsp4HI GCNGC 7 cut(s) 271, 369, 479, 744, 1609, 2014, 2196
GluI GCNGC 7 cut(s) 271, 369, 479, 744, 1609, 2014, 2196
GsaI CCCAGC 2 cut(s) 478, 485
GsuI CTGGAG 3 cut(s) 305, 655, 1917
HaeIII GGCC 5 cut(s) 215, 646, 865, 2206, 2269
HapII CCGG 1 cut(s) 963
HgaI GACGC 2 cut(s) 743, 1725
HincII GTYRAC 2 cut(s) 321, 1440
HindII GTYRAC 2 cut(s) 321, 1440
HindIII AAGCTT 3 cut(s) 779, 882, 1660
HinfI GANTC 8 cut(s) 95, 264, 280, 301, 835, 890, 1769, 2129
HpaII CCGG 1 cut(s) 963
HphI GGTGA 3 cut(s) 467, 1609, 2138
Hpy166II GTNNAC 6 cut(s) 321, 1440, 1511, 1978, 2164, 2183
Hpy8I GTNNAC 6 cut(s) 321, 1440, 1511, 1978, 2164, 2183
HpyAV CCTTC 9 cut(s) 380, 563, 640, 1238, 1519, 1774, 2084, 2209, 2357
HpyCH4III ACNGT 5 cut(s) 81, 1152, 1884, 1982, 2356
HpyCH4IV ACGT 4 cut(s) 165, 1670, 1918, 2320
HpyF10VI GCNNNNNNNGC 3 cut(s) 743, 1330, 2170
HpyF3I CTNAG 4 cut(s) 1558, 1846, 2234, 2262
HpySE526I ACGT 4 cut(s) 165, 1670, 1918, 2320
Ksp22I TGATCA 1 cut(s) 603
Kzo9I GATC 9 cut(s) 541, 603, 620, 688, 1068, 1349, 1399, 1416, 1681
LmnI GCTCC 3 cut(s) 286, 854, 945
Lsp1109I GCAGC 6 cut(s) 282, 355, 755, 1595, 2025, 2182
LweI GCATC 1 cut(s) 1581
MaeII ACGT 4 cut(s) 165, 1670, 1918, 2320
MaeIII GTNAC 5 cut(s) 238, 328, 409, 455, 930
MalI GATC 9 cut(s) 543, 605, 622, 690, 1070, 1351, 1401, 1418, 1683
MboI GATC 9 cut(s) 541, 603, 620, 688, 1068, 1349, 1399, 1416, 1681
MboII GAAGA 8 cut(s) 127, 753, 1024, 1078, 1367, 1586, 1631, 2032
MfeI CAATTG 1 cut(s) 1281
MhlI GDGCHC 2 cut(s) 512, 2166
MlsI TGGCCA 1 cut(s) 215
MluCI AATT 8 cut(s) 307, 725, 986, 1162, 1254, 1281, 1453, 1869
MluNI TGGCCA 1 cut(s) 215
MlyI GAGTC 2 cut(s) 89, 289
MmeI TCCRAC 1 cut(s) 1382
Mox20I TGGCCA 1 cut(s) 215
Mph1103I ATGCAT 2 cut(s) 1186, 2074
MroXI GAANNNNTTC 1 cut(s) 188
MscI TGGCCA 1 cut(s) 215
MslI CAYNNNNRTG 2 cut(s) 671, 2354
Msp20I TGGCCA 1 cut(s) 215
MspA1I CMGCKG 2 cut(s) 478, 566
MspI CCGG 1 cut(s) 963
MspR9I CCNGG 2 cut(s) 453, 526
MunI CAATTG 1 cut(s) 1281
Mva1269I GAATGC 1 cut(s) 1145
MvaI CCWGG 2 cut(s) 453, 526
MwoI GCNNNNNNNGC 3 cut(s) 743, 1330, 2170
NcoI CCATGG 2 cut(s) 647, 1944
NdeI CATATG 1 cut(s) 1186
NdeII GATC 9 cut(s) 541, 603, 620, 688, 1068, 1349, 1399, 1416, 1681
NlaIV GGNNCC 1 cut(s) 591
NmuCI GTSAC 2 cut(s) 455, 930
NsiI ATGCAT 2 cut(s) 1186, 2074
NspI RCATGY 2 cut(s) 341, 676
PaeI GCATGC 1 cut(s) 676
PagI TCATGA 1 cut(s) 1765
PceI AGGCCT 2 cut(s) 2206, 2269
PciI ACATGT 1 cut(s) 337
PctI GAATGC 1 cut(s) 1145
PdmI GAANNNNTTC 1 cut(s) 188
PfeI GAWTC 6 cut(s) 264, 301, 835, 890, 1769, 2129
PflMI CCANNNNNTGG 2 cut(s) 481, 551
PkrI GCNGC 7 cut(s) 272, 370, 480, 745, 1610, 2015, 2197
PleI GAGTC 2 cut(s) 89, 288
PmaCI CACGTG 1 cut(s) 1919
PmlI CACGTG 1 cut(s) 1919
PpsI GAGTC 2 cut(s) 89, 288
Ppu21I YACGTR 2 cut(s) 166, 1919
PscI ACATGT 1 cut(s) 337
PshBI ATTAAT 1 cut(s) 615
PsiI TTATAA 2 cut(s) 60, 1503
Psp6I CCWGG 2 cut(s) 451, 524
PspCI CACGTG 1 cut(s) 1919
PspFI CCCAGC 2 cut(s) 474, 481
PspGI CCWGG 2 cut(s) 451, 524
PspN4I GGNNCC 1 cut(s) 591
PspPI GGNCC 5 cut(s) 644, 863, 960, 1215, 1493
PstI CTGCAG 2 cut(s) 373, 2200
PstNI CAGNNNCTG 1 cut(s) 481
PvuII CAGCTG 1 cut(s) 566
RsaI GTAC 7 cut(s) 87, 164, 924, 1023, 1086, 2184, 2323
RsaNI GTAC 7 cut(s) 86, 163, 923, 1022, 1085, 2183, 2322
RseI CAYNNNNRTG 2 cut(s) 671, 2354
SatI GCNGC 7 cut(s) 271, 369, 479, 744, 1609, 2014, 2196
Sau3AI GATC 9 cut(s) 541, 603, 620, 688, 1068, 1349, 1399, 1416, 1681
Sau96I GGNCC 5 cut(s) 644, 863, 960, 1215, 1493
SchI GAGTC 2 cut(s) 89, 289
ScrFI CCNGG 2 cut(s) 453, 526
SduI GDGCHC 2 cut(s) 512, 2166
SfaNI GCATC 1 cut(s) 1581
SfcI CTRYAG 5 cut(s) 111, 369, 1446, 1978, 2196
SinI GGWCC 3 cut(s) 960, 1215, 1493
SmiMI CAYNNNNRTG 2 cut(s) 671, 2354
SmlI CTYRAG 1 cut(s) 51
SmoI CTYRAG 1 cut(s) 51
SpeI ACTAGT 1 cut(s) 356
SphI GCATGC 1 cut(s) 676
Sse9I AATT 8 cut(s) 307, 725, 986, 1162, 1254, 1281, 1453, 1869
SseBI AGGCCT 2 cut(s) 2206, 2269
SsiI CCGC 2 cut(s) 478, 573
SspI AATATT 3 cut(s) 713, 1198, 1726
StuI AGGCCT 2 cut(s) 2206, 2269
StyD4I CCNGG 2 cut(s) 451, 524
StyI CCWWGG 2 cut(s) 647, 1944
TaaI ACNGT 5 cut(s) 81, 1152, 1884, 1982, 2356
TaiI ACGT 4 cut(s) 168, 1673, 1921, 2323
TaqI TCGA 5 cut(s) 123, 619, 691, 838, 1680
TasI AATT 8 cut(s) 307, 725, 986, 1162, 1254, 1281, 1453, 1869
TatI WGTACW 2 cut(s) 85, 2182
TauI GCSGC 1 cut(s) 481
TfiI GAWTC 6 cut(s) 264, 301, 835, 890, 1769, 2129
TscAI CASTG 3 cut(s) 1157, 1889, 2361
TseFI GTSAC 2 cut(s) 455, 930
TseI GCWGC 6 cut(s) 270, 368, 743, 1608, 2013, 2195
Tsp45I GTSAC 2 cut(s) 455, 930
TspGWI ACGGA 1 cut(s) 1890
TspRI CASTG 3 cut(s) 1157, 1889, 2361
Van91I CCANNNNNTGG 2 cut(s) 481, 551
VneI GTGCAC 1 cut(s) 2162
VpaK11BI GGWCC 3 cut(s) 960, 1215, 1493
VspI ATTAAT 1 cut(s) 615
XapI RAATTY 1 cut(s) 307
XbaI TCTAGA 1 cut(s) 1378
XceI RCATGY 2 cut(s) 341, 676
XmiI GTMKAC 2 cut(s) 1510, 1977
XmnI GAANNNNTTC 1 cut(s) 188
Zsp2I ATGCAT 2 cut(s) 1186, 2074
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.