Rroxscaffold_4G00328630

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Forward (+)
61718283 .. 61723736
5454 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00328630.1

Sequence Viewer

Length: 2418 bp
ATGGATATTAGAACCAGAAGCATCTGTGCTTTAAATGGCTCCATGTTCTTCTTCCTTTTGATTTTCTTAATCAGCTTGCTTCCATCCCATTATCATTGCGCTGACGTTGATGAGATAACTCCTTCGCAACCATTAGCGCAAGGGCAAACTCTAGTTTCCCCTGGCCACATTTTTGAGTTAGGCTTCTTCACTCCTAATAACTCTGCTAACAAGTATGTGGGGATATGGCACAAGGATATATCTCCGCGAAAAGTTGTATGGGTGGTCAACAGAGAAAATCCTCTCGCAGCTACAGACACCACGGCGAGCTTGACTGTTAACAGCAAAGGGAATCTGAAGCTTGTTGATGGGAAACAGAAGTCTATTTGGTCTACCAATGCTACTTCTTTGGTGTCATCATTGGATAATAGTTCAGTTGCTGCAGTTCTTTTAGACAATGGAAACTTTGTTGTTAATGATCATCTGGGAGCTGAGTTATGGCAGAGCTTTGATCATCCTGGTGACACAGTCCTACCAAACATGGTTTTGCGTTACGATAAGTCTGGAAAGGGGAACTTCTTGAGTTCTTGGAAAGCAGAGAATGATCCATCACCAGGGAGATTCTTGATTGGATTGGCTCCACAGACGCCTTCGCAAGTGTTCATTTGGATCAATAATGGATCAAATGATTCACATTCAGTTCCTTACTGGAGAAGTGGACCATGGGATAAGTCAAGCTTCATTGGTGTACCAGAAATGGATCATCGATATATAAATGGATTTAGTGTAGATGATAACTTAAAGCAGGGCACGCAGGATTTTTCTTATAGTTTATATGACAAACCTGTGGCATACATATACATATCTCCAGAAGGAATAGTGAGGCTGACATTTTCCAAGAATGATGGGAAGTGGTATGTTTATTGGCAGACACCTAAGAATGCATGTGACATTTATGGAGCTTGTGGACCTTTTGGAGTTTGCAAAGCTTCTGCATCTCCAATATGTAAGTGTTTGAAAGGTTTTGTACCGAAGTCAAGCGCGCAATGGAGCAAAGGAAATTGGACAGGAGGGTGTGTGAGGCAGACCAAATTGTTTTGTGAGAGGCAAACAAATAAGTCAGCCTCATCAAGCGGAAAACAAGTTGATGATGATGGGTTTTGGAAGATGGTGAAGTTGAAAATACCAGATTCTCATGAGTTCGTTACTGCTTTCAATGCCGAAGAAACGTCCGATGACTGCAAATTACGATGCCTAAACAACTGTTCTTGCGTTGCTTATGCATTTGTCAATAATATAGGGTGTTTGGTGTGGTCCAAAGATCTTATTGATATACAGCAGTTTTCGGCATCTGTCGGAGTAGATCTTTATATTCGCCTAGCACGCTCCGAACTGGGTGAAGGAAAGCCAATAAAGTTAATCGCCAGCCTTACAGCTATTGGTTTTGTGAGTATCTTGGCAGCCATAGTATTCGGATTTTACAGGAGGCAAGCTAACCAGAAGAGACAGATCAAACAAACAATAGAGAACTTTAAATCGACTGGTATGATTAAGAGTTCAAGAGATGGTCTCCGAGAATATATAGGAAAGCATGATCCCTCAGAGCTAAAGATATATGATTTTGATAGCATACTAATTGCTACAAACAACTTCAGTCTCGCAAACAAACTTGGGCAAGGAGGATTTGGCCCAGTTTATAAGGGTATGCTACATGATGGGAAGGAAGTAGCTGTAAAGAGACTATCTAGTAGCTCAGGACAAGGCATTGAAGAGTTCAAGAACGAGATGCTGTTGATCTCCAATCTTCAACATAAAAATCTAGTTAGGATCATGGGTTGCTGCATTAAAGAGGATGAGAAGTTACTGATTTATGAGTTCATGCCAAACAAAAGCTTGGATACTTTTCTATTCGATACGAGGAAGAGAGCAGTGCTTGATTGGGTGACACGCTTTAATATTATTCAGGGTGTTGCTAGAGGGCTTCTTTATCTTCATCATGATTCGTATGTGAAGTGGCTACATGTCTCCCGAGTATGCCATGGGGGGATGTTTTCTGAAAAATCCGATGTCTACAGCTTCGGGGTTTTGATGTTGGAGATTCTTAGTAGCAAGAAGAATACCAGCTTCTCTTTATATGACCAACAGCTAGGCTTTCTAGCCTATGGTTTGGAGTTGGTAGATGAAATATTGGGTGATTCATATTCCTCATCGGAAGTACTAAAATGCATCCATATCGGGCTTCTGTGTGTACAAGACAATGCTGTGGATAGGCCAACCATGGCAGATATAGCTTTGATGTTAAGTAGTGAGAAAGATGGTCCACAACCTAAACTGCCTTTATTCACTATCCAAAACTCAGCTCATTATCCTCAACCACACTATGAGAATACAAATTCCTCCAAAAATGAAGCTAGCATTACAATGATTGAAGGACGATAA

Protein Analysis

805

Amino Acids

89.8

Weight (kDa)

7.76

Isoelectric Point (pI)

37.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 85 - 191 1.1e-27 D-mannose binding lectin
S_locus_glycop PF00954 230 - 339 1e-29 S-locus glycoprotein domain
PAN_2 PF08276 376 - 438 6.9e-16 PAN-like domain
PK_Tyr_Ser-Thr PF07714 546 - 663 1.3e-21 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 546 - 661 7.8e-17 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1677
AccI GTMKAC 2 cut(s) 371, 2049
AccII CGCG 2 cut(s) 247, 1022
AciI CCGC 2 cut(s) 245, 1113
AclWI GGATC 6 cut(s) 578, 656, 667, 747, 1568, 1814
AcoI YGGCCR 1 cut(s) 163
AcsI RAATTY 1 cut(s) 2371
AcuI CTGAAG 2 cut(s) 356, 1615
AcyI GRCGYC 1 cut(s) 626
AfaI GTAC 4 cut(s) 729, 1008, 2196, 2229
AfiI CCNNNNNNNGG 1 cut(s) 593
AflIII ACRYGT 1 cut(s) 1999
AgsI TTSAA 8 cut(s) 997, 1159, 1195, 1539, 1748, 1756, 1787, 2408
AjnI CCWGG 3 cut(s) 160, 496, 592
Alw26I GTCTC 5 cut(s) 1477, 1553, 1640, 1711, 2008
AlwI GGATC 6 cut(s) 578, 656, 667, 747, 1568, 1814
AlwNI CAGNNNCTG 1 cut(s) 419
Ama87I CYCGRG 1 cut(s) 2007
AoxI GGCC 3 cut(s) 163, 1666, 2249
ApeKI GCWGC 4 cut(s) 287, 419, 1439, 1818
ApoI RAATTY 1 cut(s) 2371
AspLEI GCGC 4 cut(s) 101, 139, 1022, 1024
AspS9I GGNCC 5 cut(s) 698, 947, 1293, 1667, 2297
AsuHPI GGTGA 6 cut(s) 512, 582, 1162, 1388, 1933, 2183
AsuNHI GCTAGC 1 cut(s) 2390
AvaI CYCGRG 1 cut(s) 2007
AvaII GGWCC 4 cut(s) 698, 947, 1293, 2297
BaeGI GKGCMC 1 cut(s) 791
BalI TGGCCA 1 cut(s) 165
BbvI GCAGC 4 cut(s) 299, 406, 1451, 1805
BccI CCATC 9 cut(s) 91, 341, 595, 878, 1127, 1141, 1538, 1688, 2288
BceAI ACGGC 1 cut(s) 318
BcgI CGANNNNNNTGC 2 cut(s) 2194, 2228
BciT130I CCWGG 3 cut(s) 162, 498, 594
BciVI GTATCC 1 cut(s) 1870
BclI TGATCA 2 cut(s) 457, 490
BcoDI GTCTC 5 cut(s) 1477, 1553, 1640, 1711, 2008
BfaI CTAG 8 cut(s) 152, 1358, 1725, 1799, 1953, 2126, 2135, 2391
BfmI CTRYAG 3 cut(s) 291, 420, 2050
BfuI GTATCC 1 cut(s) 1870
BglII AGATCT 2 cut(s) 1300, 1342
BisI GCNGC 4 cut(s) 288, 420, 1440, 1819
BlsI GCNGC 4 cut(s) 289, 421, 1441, 1820
BmcAI AGTACT 1 cut(s) 2196
Bme1390I CCNGG 3 cut(s) 162, 498, 594
Bme18I GGWCC 4 cut(s) 698, 947, 1293, 2297
BmeT110I CYCGRG 1 cut(s) 2007
BmgT120I GGNCC 5 cut(s) 698, 947, 1293, 1667, 2297
BmiI GGNNCC 2 cut(s) 40, 618
BmrFI CCNGG 3 cut(s) 162, 498, 594
BmrI ACTGGG 2 cut(s) 1382, 1664
BmsI GCATC 6 cut(s) 30, 983, 1220, 1337, 1755, 2214
BmtI GCTAGC 1 cut(s) 2394
BmuI ACTGGG 2 cut(s) 1382, 1664
BplI GAGNNNNNCTC 2 cut(s) 1533, 1565
BpmI CTGGAG 2 cut(s) 709, 831
Bpu10I CCTNAGC 1 cut(s) 1732
BpuEI CTTGAG 1 cut(s) 580
Bsa29I ATCGAT 1 cut(s) 745
BsaHI GRCGYC 1 cut(s) 626
BsaI GGTCTC 1 cut(s) 1553
BsaJI CCNNGG 6 cut(s) 160, 300, 593, 701, 2017, 2256
BsaXI ACNNNNNCTCC 2 cut(s) 1041, 1071
Bsc4I CCNNNNNNNGG 1 cut(s) 593
Bse1I ACTGG 4 cut(s) 692, 1377, 1525, 1670
Bse3DI GCAATG 2 cut(s) 94, 1031
BseBI CCWGG 3 cut(s) 162, 498, 594
BseCI ATCGAT 1 cut(s) 745
BseDI CCNNGG 6 cut(s) 160, 300, 593, 701, 2017, 2256
BseGI GGATG 5 cut(s) 83, 493, 1837, 2031, 2205
BseLI CCNNNNNNNGG 1 cut(s) 593
BseMI GCAATG 2 cut(s) 94, 1031
BseMII CTCAG 4 cut(s) 462, 1593, 1746, 2349
BseNI ACTGG 4 cut(s) 692, 1377, 1525, 1670
BsePI GCGCGC 1 cut(s) 1020
BseSI GKGCMC 1 cut(s) 791
BseXI GCAGC 4 cut(s) 299, 406, 1451, 1805
Bsh1236I CGCG 2 cut(s) 247, 1022
BshFI GGCC 3 cut(s) 165, 1668, 2251
BshVI ATCGAT 1 cut(s) 745
BsiHKCI CYCGRG 1 cut(s) 2007
BslI CCNNNNNNNGG 1 cut(s) 593
BsmAI GTCTC 5 cut(s) 1477, 1553, 1640, 1711, 2008
BsmI GAATGC 1 cut(s) 925
BsnI GGCC 3 cut(s) 165, 1668, 2251
Bso31I GGTCTC 1 cut(s) 1553
BsoBI CYCGRG 1 cut(s) 2007
Bsp1286I GDGCHC 1 cut(s) 791
Bsp1407I TGTACA 1 cut(s) 2227
Bsp19I CCATGG 3 cut(s) 701, 2017, 2256
BspACI CCGC 2 cut(s) 245, 1113
BspANI GGCC 3 cut(s) 165, 1668, 2251
BspCNI CTCAG 4 cut(s) 463, 1592, 1745, 2348
BspDI ATCGAT 1 cut(s) 745
BspFNI CGCG 2 cut(s) 247, 1022
BspHI TCATGA 2 cut(s) 1174, 1975
BspLI GGNNCC 2 cut(s) 40, 618
BspMAI CTGCAG 1 cut(s) 424
BspOI GCTAGC 1 cut(s) 2394
BspPI GGATC 6 cut(s) 578, 656, 667, 747, 1568, 1814
BspTNI GGTCTC 1 cut(s) 1553
BsrDI GCAATG 2 cut(s) 94, 1031
BsrGI TGTACA 1 cut(s) 2227
BsrI ACTGG 4 cut(s) 692, 1377, 1525, 1670
BssECI CCNNGG 6 cut(s) 160, 300, 593, 701, 2017, 2256
BssHII GCGCGC 1 cut(s) 1020
BssNI GRCGYC 1 cut(s) 626
BssT1I CCWWGG 3 cut(s) 701, 2017, 2256
Bst2UI CCWGG 3 cut(s) 162, 498, 594
Bst4CI ACNGT 3 cut(s) 316, 508, 1244
Bst6I CTCTTC 3 cut(s) 1475, 1743, 1895
BstACI GRCGYC 1 cut(s) 626
BstAUI TGTACA 1 cut(s) 2227
BstC8I GCNNGC 8 cut(s) 77, 307, 791, 1022, 1363, 1405, 1470, 2392
BstDEI CTNAG 6 cut(s) 471, 915, 1579, 1732, 2081, 2335
BstDSI CCRYGG 4 cut(s) 300, 701, 2017, 2256
BstF5I GGATG 5 cut(s) 83, 493, 1837, 2031, 2205
BstFNI CGCG 2 cut(s) 247, 1022
BstHHI GCGC 4 cut(s) 101, 139, 1022, 1024
BstMAI GTCTC 5 cut(s) 1477, 1553, 1640, 1711, 2008
BstMWI GCNNNNNNNGC 4 cut(s) 790, 1196, 1362, 2267
BstNI CCWGG 3 cut(s) 162, 498, 594
BstNSI RCATGY 2 cut(s) 927, 2003
BstSCI CCNGG 3 cut(s) 160, 496, 592
BstSFI CTRYAG 3 cut(s) 291, 420, 2050
BstSLI GKGCMC 1 cut(s) 791
BstUI CGCG 2 cut(s) 247, 1022
BstV1I GCAGC 4 cut(s) 299, 406, 1451, 1805
BstX2I RGATCY 2 cut(s) 1300, 1342
BstYI RGATCY 2 cut(s) 1300, 1342
Bsu15I ATCGAT 1 cut(s) 745
BsuI GTATCC 1 cut(s) 1870
BsuRI GGCC 3 cut(s) 165, 1668, 2251
BsuTUI ATCGAT 1 cut(s) 745
BtgI CCRYGG 4 cut(s) 300, 701, 2017, 2256
BtsCI GGATG 5 cut(s) 83, 493, 1837, 2031, 2205
BtsI GCAGTG 1 cut(s) 1914
BtsIMutI CAGTG 1 cut(s) 1914
Cac8I GCNNGC 8 cut(s) 77, 307, 791, 1022, 1363, 1405, 1470, 2392
CaiI CAGNNNCTG 1 cut(s) 419
CciI TCATGA 2 cut(s) 1174, 1975
CfoI GCGC 4 cut(s) 101, 139, 1022, 1024
Cfr13I GGNCC 5 cut(s) 698, 947, 1293, 1667, 2297
ClaI ATCGAT 1 cut(s) 745
CseI GACGC 1 cut(s) 634
Csp6I GTAC 4 cut(s) 728, 1007, 2195, 2228
CviQI GTAC 4 cut(s) 728, 1007, 2195, 2228
DdeI CTNAG 6 cut(s) 471, 915, 1579, 1732, 2081, 2335
DraI TTTAAA 2 cut(s) 33, 1513
EaeI YGGCCR 1 cut(s) 163
Eam1104I CTCTTC 3 cut(s) 1475, 1743, 1895
EarI CTCTTC 3 cut(s) 1475, 1743, 1895
Eco130I CCWWGG 3 cut(s) 701, 2017, 2256
Eco31I GGTCTC 1 cut(s) 1553
Eco47I GGWCC 4 cut(s) 698, 947, 1293, 2297
Eco57I CTGAAG 2 cut(s) 356, 1615
Eco88I CYCGRG 1 cut(s) 2007
EcoRII CCWGG 3 cut(s) 160, 496, 592
EcoT14I CCWWGG 3 cut(s) 701, 2017, 2256
EcoT22I ATGCAT 3 cut(s) 925, 1264, 2207
ErhI CCWWGG 3 cut(s) 701, 2017, 2256
FalI AAGNNNNNCTT 4 cut(s) 539, 571, 701, 733
FbaI TGATCA 2 cut(s) 457, 490
FblI GTMKAC 2 cut(s) 371, 2049
Fnu4HI GCNGC 4 cut(s) 288, 420, 1440, 1819
FokI GGATG 5 cut(s) 70, 480, 1844, 2038, 2192
Fsp4HI GCNGC 4 cut(s) 288, 420, 1440, 1819
FspBI CTAG 8 cut(s) 152, 1358, 1725, 1799, 1953, 2126, 2135, 2391
GlaI GCGC 4 cut(s) 100, 138, 1021, 1023
GluI GCNGC 4 cut(s) 288, 420, 1440, 1819
GsuI CTGGAG 2 cut(s) 709, 831
HaeIII GGCC 3 cut(s) 165, 1668, 2251
HgaI GACGC 1 cut(s) 634
HhaI GCGC 4 cut(s) 101, 139, 1022, 1024
Hin1I GRCGYC 1 cut(s) 626
Hin6I GCGC 4 cut(s) 99, 137, 1020, 1022
HinP1I GCGC 4 cut(s) 99, 137, 1020, 1022
HincII GTYRAC 2 cut(s) 268, 319
HindII GTYRAC 2 cut(s) 268, 319
HindIII AAGCTT 4 cut(s) 338, 715, 966, 1870
HinfI GANTC 7 cut(s) 331, 600, 668, 1169, 1979, 2077, 2174
HpaI GTTAAC 1 cut(s) 319
HphI GGTGA 6 cut(s) 512, 582, 1162, 1388, 1933, 2183
Hpy166II GTNNAC 9 cut(s) 268, 319, 372, 698, 728, 947, 2050, 2228, 2300
Hpy8I GTNNAC 9 cut(s) 268, 319, 372, 698, 728, 947, 2050, 2228, 2300
HpyAV CCTTC 6 cut(s) 132, 639, 845, 1373, 1693, 2402
HpyCH4III ACNGT 3 cut(s) 316, 508, 1244
HpyCH4IV ACGT 2 cut(s) 105, 1208
HpyCH4V TGCA 8 cut(s) 422, 923, 963, 974, 1221, 1262, 1821, 2205
HpyF10VI GCNNNNNNNGC 4 cut(s) 790, 1196, 1362, 2267
HpyF3I CTNAG 6 cut(s) 471, 915, 1579, 1732, 2081, 2335
HpySE526I ACGT 2 cut(s) 105, 1208
Hsp92I GRCGYC 1 cut(s) 626
HspAI GCGC 4 cut(s) 99, 137, 1020, 1022
Ksp22I TGATCA 2 cut(s) 457, 490
KspAI GTTAAC 1 cut(s) 319
LmnI GCTCC 6 cut(s) 44, 467, 622, 938, 1029, 1370
Lsp1109I GCAGC 4 cut(s) 299, 406, 1451, 1805
LweI GCATC 6 cut(s) 30, 983, 1220, 1337, 1755, 2214
MaeI CTAG 8 cut(s) 152, 1358, 1725, 1799, 1953, 2126, 2135, 2391
MaeII ACGT 2 cut(s) 105, 1208
MaeIII GTNAC 6 cut(s) 500, 530, 926, 1183, 1839, 1921
MflI RGATCY 2 cut(s) 1300, 1342
MhlI GDGCHC 1 cut(s) 791
MlsI TGGCCA 1 cut(s) 165
MluCI AATT 5 cut(s) 1039, 1070, 1223, 1614, 2371
MluNI TGGCCA 1 cut(s) 165
MmeI TCCRAC 2 cut(s) 1315, 2052
Mox20I TGGCCA 1 cut(s) 165
Mph1103I ATGCAT 3 cut(s) 925, 1264, 2207
MscI TGGCCA 1 cut(s) 165
MslI CAYNNNNRTG 2 cut(s) 498, 2399
Msp20I TGGCCA 1 cut(s) 165
MspR9I CCNGG 3 cut(s) 162, 498, 594
Mva1269I GAATGC 1 cut(s) 925
MvaI CCWGG 3 cut(s) 162, 498, 594
MvnI CGCG 2 cut(s) 247, 1022
MwoI GCNNNNNNNGC 4 cut(s) 790, 1196, 1362, 2267
NcoI CCATGG 3 cut(s) 701, 2017, 2256
NheI GCTAGC 1 cut(s) 2390
NlaIV GGNNCC 2 cut(s) 40, 618
NmuCI GTSAC 3 cut(s) 500, 926, 1921
NsiI ATGCAT 3 cut(s) 925, 1264, 2207
NspI RCATGY 2 cut(s) 927, 2003
PagI TCATGA 2 cut(s) 1174, 1975
PauI GCGCGC 1 cut(s) 1020
PciI ACATGT 1 cut(s) 1999
PctI GAATGC 1 cut(s) 925
PfeI GAWTC 7 cut(s) 331, 600, 668, 1169, 1979, 2077, 2174
PflFI GACNNNGTC 1 cut(s) 506
PkrI GCNGC 4 cut(s) 289, 421, 1441, 1820
PscI ACATGT 1 cut(s) 1999
PsiI TTATAA 1 cut(s) 1677
Psp6I CCWGG 3 cut(s) 160, 496, 592
PspGI CCWGG 3 cut(s) 160, 496, 592
PspN4I GGNNCC 2 cut(s) 40, 618
PspPI GGNCC 5 cut(s) 698, 947, 1293, 1667, 2297
PstI CTGCAG 1 cut(s) 424
PstNI CAGNNNCTG 1 cut(s) 419
PsuI RGATCY 2 cut(s) 1300, 1342
PsyI GACNNNGTC 1 cut(s) 506
PteI GCGCGC 1 cut(s) 1020
RsaI GTAC 4 cut(s) 729, 1008, 2196, 2229
RsaNI GTAC 4 cut(s) 728, 1007, 2195, 2228
RseI CAYNNNNRTG 2 cut(s) 498, 2399
SatI GCNGC 4 cut(s) 288, 420, 1440, 1819
Sau96I GGNCC 5 cut(s) 698, 947, 1293, 1667, 2297
ScaI AGTACT 1 cut(s) 2196
ScrFI CCNGG 3 cut(s) 162, 498, 594
SduI GDGCHC 1 cut(s) 791
SfaNI GCATC 6 cut(s) 30, 983, 1220, 1337, 1755, 2214
SfcI CTRYAG 3 cut(s) 291, 420, 2050
SinI GGWCC 4 cut(s) 698, 947, 1293, 2297
SmiMI CAYNNNNRTG 2 cut(s) 498, 2399
SmlI CTYRAG 1 cut(s) 559
SmoI CTYRAG 1 cut(s) 559
Sse9I AATT 5 cut(s) 1039, 1070, 1223, 1614, 2371
SsiI CCGC 2 cut(s) 245, 1113
SspI AATATT 2 cut(s) 1936, 2166
SspMI CTAG 8 cut(s) 152, 1358, 1725, 1799, 1953, 2126, 2135, 2391
StyD4I CCNGG 3 cut(s) 160, 496, 592
StyI CCWWGG 3 cut(s) 701, 2017, 2256
TaaI ACNGT 3 cut(s) 316, 508, 1244
TaiI ACGT 2 cut(s) 108, 1211
TaqI TCGA 3 cut(s) 745, 1517, 1890
TasI AATT 5 cut(s) 1039, 1070, 1223, 1614, 2371
TatI WGTACW 2 cut(s) 2194, 2227
TfiI GAWTC 7 cut(s) 331, 600, 668, 1169, 1979, 2077, 2174
TscAI CASTG 1 cut(s) 1914
TseFI GTSAC 3 cut(s) 500, 926, 1921
TseI GCWGC 4 cut(s) 287, 419, 1439, 1818
Tsp45I GTSAC 3 cut(s) 500, 926, 1921
TspDTI ATGAA 7 cut(s) 631, 709, 1846, 1961, 2166, 2175, 2400
TspRI CASTG 1 cut(s) 1914
Tth111I GACNNNGTC 1 cut(s) 506
VpaK11BI GGWCC 4 cut(s) 698, 947, 1293, 2297
XapI RAATTY 1 cut(s) 2371
XceI RCATGY 2 cut(s) 927, 2003
XmiI GTMKAC 2 cut(s) 371, 2049
XspI CTAG 8 cut(s) 152, 1358, 1725, 1799, 1953, 2126, 2135, 2391
ZrmI AGTACT 1 cut(s) 2196
Zsp2I ATGCAT 3 cut(s) 925, 1264, 2207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.