Rorug05G0144500

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
13384930 .. 13389456
4527 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0144500.1

Sequence Viewer

Length: 1752 bp
ATGGCCAATTCAGCTGAGCCATCATCTTCTTTGAGCTTCACTTCACCTTCCCATATATCAAATGGTTCAATCAGCCACAACTTATCTTCCTTTGAAGCCGTGCCTAGTCTTGAAGTCATCAGTTTGACCAAGCTCAGCCTTAGTTTGGACCAGCTCTTGGGTGATTCTGGCTGTGATTATAGTGATGCTGAAATCATAGTTGAGGGAGAATCTGTTGGTGTTCACCGATGTATATTAGCTTCTAGGAGTAAGTTTTTTTGCAAACTATTCAAGCAAGAAAAGGGGTCTTCTGAGAAGGAGGGCAAACCTAGCAAACCAAAGTATAGTATGAAGGATTTGCTACCTTATGGTGACGTTGGATATGAAGCATTTTCGGTTTTCTTGAGCTACGTGTATACTGGAAAGCTGAAGCCTTCTCCCGTGGAGGTGTCAACTTGCGTGCACAATGTATGCGCCCATGACTCATGTAGACCTGCAATCAATTTTGCTGTGGAATTGATGTATGCCTCTTCCATTTTCCAAATGCTGGATCTGGTTTCAATATTCGAGCGACGCCTTCTTAATTTTGTTGGGAAAGCTCTGACAGAAGATGTTATCCCAATCCTTTTGGTTGCTTTCCACTGTCAGTTGAGCGAGCTTCTCACTCATTCTATAGAGAGAGTGGCACGATCAGATCTTGATAGCATCTGTATTGACAAGGAACTTCCGTATGAGGTTGTAGAGAAAATTAATTTGCTTCGTCGTGATTCTCAACATGATGGTGGACTGAACACACCACCTGTGGACCCCTTGCGTGAAAAAAGAATCAGGCGAATACATAAGGCATTGGACTCAGATGATGTTGAACTTGTGAAACTTCTTTTATCTGAGTCGAATATAACCTTAGATGAAGCCCATGCTCTCCACTATGCTGCAGCTTACTGTGATCCTAAGATTGTTACTGAAGTTCTTGCTTTGGGTCTGGCTGATGTTAACCTTCGGAATTCTCGGGGTTATACCGTGCTTCACATTGCTGTGATGCGCAAAGAGCCATCAATTATAGTATTGCTTCTTAGTAAAGGAGCTCGTGCATCAGAGCTGACATCAGATGGTCAGAGTGCGGTTAGTATTTGCCGGCGGTTGACAAGGCCAAAGGATTATCATTCAAAAACAGGGCAGGGGCAAGAAACGAACAAGGATCGAATTTGCATTGATGTTCTAGAGAGAGAAATGCGGAGGAATCCAATGGCGGGAGATGCATCTATGTCTTCCCAAACAATGGCTGATGATCTGCACATGAAATTGCTGTACCTGGAGAACAGAGTGGCTTTTGCCCGTTTGTTCTTCCCTAGTGAAGCCAAGCTAGCCATGGTCGTTGCTCAATCCGAGACAACGTCTGAGTTGCCATCAAAAGGCTCAAGTGGGAACTTGATGGAGGTTGATTTAAACGAGACCCCCACTGTGCAGAAGAAAAGACTCCATTCTAGGTTGGAATCCCTTATGAAAACAGTCAACATGGGTAGATGCTATTTCCCCCATTGCTCGGAAGTCCTGGATAAGTTTATGGAGGATGACCTACCTGATTTGTTTTTCCTTGAGACGGGCACCCCTGACGAGCAGAAAATAAAGAGGATGCGTTTCATGGAGCTCAAGGACGAAGTCCATAAGGCATTTAGCAAGGACAAAGCCGAGCTCAACCTCTCTGGGTTGACTTCCTCATCATCCACCTCGTCTCCAAAAAAAGTTGGTGCAAATCACAAGACTAGGAAATAG

Protein Analysis

583

Amino Acids

64.92

Weight (kDa)

6.34

Isoelectric Point (pI)

44.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BTB PF00651 59 - 139 6.3e-11 BTB/POZ domain
DUF3420 PF11900 225 - 273 2.4e-11 Domain of unknown function (DUF3420)
Ank_2 PF12796 273 - 356 1.1e-09 Ankyrin repeats (3 copies)
NPR1_like_C PF12313 372 - 570 1.1e-87 NPR1/NIM1 like defence protein C terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1022
Acc36I ACCTGC 1 cut(s) 481
AccB1I GGYRCC 1 cut(s) 1583
AccB7I CCANNNNNTGG 3 cut(s) 157, 526, 1258
AccI GTMKAC 2 cut(s) 395, 469
AciI CCGC 4 cut(s) 1100, 1117, 1213, 1229
AclWI GGATC 3 cut(s) 537, 920, 1185
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 2 cut(s) 982, 1182
AcuI CTGAAG 2 cut(s) 428, 963
AcyI GRCGYC 1 cut(s) 553
AfaI GTAC 1 cut(s) 1289
AfiI CCNNNNNNNGG 8 cut(s) 145, 157, 526, 1229, 1258, 1391, 1522, 1579
AflIII ACRYGT 1 cut(s) 390
AgsI TTSAA 7 cut(s) 69, 95, 113, 271, 540, 845, 1146
AjnI CCWGG 2 cut(s) 1290, 1530
Alw21I GWGCWC 4 cut(s) 444, 1066, 1629, 1674
Alw26I GTCTC 4 cut(s) 1361, 1424, 1571, 1716
Alw44I GTGCAC 1 cut(s) 440
AlwI GGATC 3 cut(s) 537, 920, 1185
Ama87I CYCGRG 1 cut(s) 987
AoxI GGCC 2 cut(s) 3, 1127
ApaLI GTGCAC 1 cut(s) 440
ApeKI GCWGC 2 cut(s) 911, 914
ApoI RAATTY 2 cut(s) 982, 1182
AseI ATTAAT 1 cut(s) 729
AspLEI GCGC 2 cut(s) 455, 1023
AspS9I GGNCC 2 cut(s) 148, 784
AsuHPI GGTGA 4 cut(s) 36, 173, 215, 362
AsuNHI GCTAGC 1 cut(s) 1342
AvaI CYCGRG 1 cut(s) 987
AvaII GGWCC 2 cut(s) 148, 784
BaeGI GKGCMC 2 cut(s) 444, 1586
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 1 cut(s) 1583
BanII GRGCYC 3 cut(s) 1066, 1629, 1674
BarI GAAGNNNNNNTAC 2 cut(s) 223, 255
BauI CACGAG 1 cut(s) 1065
BbsI GAAGAC 2 cut(s) 279, 1239
Bbv12I GWGCWC 4 cut(s) 444, 1066, 1629, 1674
BbvI GCAGC 2 cut(s) 898, 926
BccI CCATC 6 cut(s) 28, 752, 1039, 1082, 1393, 1405
BceAI ACGGC 1 cut(s) 83
BciT130I CCWGG 2 cut(s) 1292, 1532
BcoDI GTCTC 4 cut(s) 1361, 1424, 1571, 1716
BfaI CTAG 8 cut(s) 105, 243, 309, 1199, 1329, 1343, 1464, 1743
BfmI CTRYAG 2 cut(s) 651, 912
BfuAI ACCTGC 1 cut(s) 481
BglII AGATCT 1 cut(s) 673
BisI GCNGC 2 cut(s) 912, 915
BlpI GCTNAGC 2 cut(s) 15, 134
BlsI GCNGC 2 cut(s) 913, 916
Bme1390I CCNGG 2 cut(s) 1292, 1532
Bme18I GGWCC 2 cut(s) 148, 784
BmeT110I CYCGRG 1 cut(s) 987
BmgT120I GGNCC 2 cut(s) 148, 784
BmiI GGNNCC 2 cut(s) 786, 1585
BmrFI CCNGG 2 cut(s) 1292, 1532
BmsI GCATC 8 cut(s) 175, 693, 1008, 1079, 1225, 1247, 1493, 1602
BmtI GCTAGC 1 cut(s) 1346
BpiI GAAGAC 2 cut(s) 279, 1239
BpmI CTGGAG 1 cut(s) 1313
Bpu1102I GCTNAGC 2 cut(s) 15, 134
BpuEI CTTGAG 4 cut(s) 403, 1381, 1595, 1613
BsaAI YACGTR 1 cut(s) 391
BsaHI GRCGYC 1 cut(s) 553
BsaI GGTCTC 1 cut(s) 1424
BsaJI CCNNGG 2 cut(s) 420, 1347
BsaXI ACNNNNNCTCC 4 cut(s) 198, 228, 1696, 1726
Bsc4I CCNNNNNNNGG 8 cut(s) 145, 157, 526, 1229, 1258, 1391, 1522, 1579
Bse118I RCCGGY 1 cut(s) 1113
Bse1I ACTGG 1 cut(s) 403
Bse3DI GCAATG 2 cut(s) 1008, 1516
BseBI CCWGG 2 cut(s) 1292, 1532
BseDI CCNNGG 2 cut(s) 420, 1347
BseGI GGATG 3 cut(s) 1555, 1617, 1700
BseLI CCNNNNNNNGG 8 cut(s) 145, 157, 526, 1229, 1258, 1391, 1522, 1579
BseMI GCAATG 2 cut(s) 1008, 1516
BseMII CTCAG 6 cut(s) 6, 148, 282, 846, 858, 1368
BseNI ACTGG 1 cut(s) 403
BseSI GKGCMC 2 cut(s) 444, 1586
BseXI GCAGC 2 cut(s) 898, 926
BsgI GTGCAG 2 cut(s) 1256, 1463
BshFI GGCC 2 cut(s) 5, 1129
BshNI GGYRCC 1 cut(s) 1583
BsiHKAI GWGCWC 4 cut(s) 444, 1066, 1629, 1674
BsiHKCI CYCGRG 1 cut(s) 987
BsiSI CCGG 1 cut(s) 1114
BslI CCNNNNNNNGG 8 cut(s) 145, 157, 526, 1229, 1258, 1391, 1522, 1579
BsmAI GTCTC 4 cut(s) 1361, 1424, 1571, 1716
BsmBI CGTCTC 2 cut(s) 1571, 1716
BsnI GGCC 2 cut(s) 5, 1129
Bso31I GGTCTC 1 cut(s) 1424
BsoBI CYCGRG 1 cut(s) 987
Bsp1286I GDGCHC 5 cut(s) 444, 1066, 1586, 1629, 1674
Bsp143I GATC 6 cut(s) 529, 668, 673, 925, 1177, 1267
Bsp1720I GCTNAGC 2 cut(s) 15, 134
Bsp19I CCATGG 1 cut(s) 1347
BspACI CCGC 4 cut(s) 1100, 1117, 1213, 1229
BspANI GGCC 2 cut(s) 5, 1129
BspCNI CTCAG 6 cut(s) 7, 147, 283, 845, 859, 1369
BspLI GGNNCC 2 cut(s) 786, 1585
BspMAI CTGCAG 1 cut(s) 916
BspMI ACCTGC 1 cut(s) 481
BspOI GCTAGC 1 cut(s) 1346
BspPI GGATC 3 cut(s) 537, 920, 1185
BspT107I GGYRCC 1 cut(s) 1583
BspTNI GGTCTC 1 cut(s) 1424
BsrDI GCAATG 2 cut(s) 1008, 1516
BsrFI RCCGGY 1 cut(s) 1113
BsrI ACTGG 1 cut(s) 403
BssAI RCCGGY 1 cut(s) 1113
BssECI CCNNGG 2 cut(s) 420, 1347
BssMI GATC 6 cut(s) 529, 668, 673, 925, 1177, 1267
BssNAI GTATAC 1 cut(s) 396
BssNI GRCGYC 1 cut(s) 553
BssSI CACGAG 1 cut(s) 1065
BssT1I CCWWGG 1 cut(s) 1347
Bst1107I GTATAC 1 cut(s) 396
Bst2BI CACGAG 1 cut(s) 1065
Bst2UI CCWGG 2 cut(s) 1292, 1532
Bst4CI ACNGT 5 cut(s) 623, 923, 1000, 1441, 1489
Bst6I CTCTTC 1 cut(s) 514
BstACI GRCGYC 1 cut(s) 553
BstBAI YACGTR 1 cut(s) 391
BstC8I GCNNGC 4 cut(s) 440, 635, 1115, 1344
BstDSI CCRYGG 2 cut(s) 420, 1347
BstF5I GGATG 3 cut(s) 1555, 1617, 1700
BstHHI GCGC 2 cut(s) 455, 1023
BstKTI GATC 6 cut(s) 532, 671, 676, 928, 1180, 1270
BstMAI GTCTC 4 cut(s) 1361, 1424, 1571, 1716
BstMBI GATC 6 cut(s) 529, 668, 673, 925, 1177, 1267
BstMWI GCNNNNNNNGC 5 cut(s) 11, 309, 1027, 1235, 1343
BstNI CCWGG 2 cut(s) 1292, 1532
BstSCI CCNGG 2 cut(s) 1290, 1530
BstSFI CTRYAG 2 cut(s) 651, 912
BstSLI GKGCMC 2 cut(s) 444, 1586
BstV1I GCAGC 2 cut(s) 898, 926
BstV2I GAAGAC 2 cut(s) 279, 1239
BstX2I RGATCY 2 cut(s) 529, 673
BstYI RGATCY 2 cut(s) 529, 673
BstZ17I GTATAC 1 cut(s) 396
BsuRI GGCC 2 cut(s) 5, 1129
BtgI CCRYGG 2 cut(s) 420, 1347
BtsCI GGATG 3 cut(s) 1555, 1617, 1700
BtsIMutI CAGTG 2 cut(s) 619, 1437
BveI ACCTGC 1 cut(s) 481
Cac8I GCNNGC 4 cut(s) 440, 635, 1115, 1344
CfoI GCGC 2 cut(s) 455, 1023
Cfr10I RCCGGY 1 cut(s) 1113
Cfr13I GGNCC 2 cut(s) 148, 784
CseI GACGC 1 cut(s) 561
Csp6I GTAC 1 cut(s) 1288
CviAII CATG 8 cut(s) 458, 465, 755, 896, 1276, 1348, 1495, 1621
CviQI GTAC 1 cut(s) 1288
DpnI GATC 6 cut(s) 531, 670, 675, 927, 1179, 1269
DpnII GATC 6 cut(s) 529, 668, 673, 925, 1177, 1267
DraI TTTAAA 1 cut(s) 1425
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 514
EarI CTCTTC 1 cut(s) 514
Ecl136II GAGCTC 3 cut(s) 1064, 1627, 1672
Eco130I CCWWGG 1 cut(s) 1347
Eco24I GRGCYC 3 cut(s) 1066, 1629, 1674
Eco31I GGTCTC 1 cut(s) 1424
Eco47I GGWCC 2 cut(s) 148, 784
Eco53kI GAGCTC 3 cut(s) 1064, 1627, 1672
Eco57I CTGAAG 2 cut(s) 428, 963
Eco88I CYCGRG 1 cut(s) 987
EcoICRI GAGCTC 3 cut(s) 1064, 1627, 1672
EcoRI GAATTC 1 cut(s) 982
EcoRII CCWGG 2 cut(s) 1290, 1530
EcoT14I CCWWGG 1 cut(s) 1347
EcoT22I ATGCAT 1 cut(s) 1240
EcoT38I GRGCYC 3 cut(s) 1066, 1629, 1674
ErhI CCWWGG 1 cut(s) 1347
Esp3I CGTCTC 2 cut(s) 1571, 1716
FaeI CATG 8 cut(s) 461, 468, 758, 899, 1279, 1351, 1498, 1624
FatI CATG 8 cut(s) 457, 464, 754, 895, 1275, 1347, 1494, 1620
FauI CCCGC 1 cut(s) 1222
FblI GTMKAC 2 cut(s) 395, 469
Fnu4HI GCNGC 2 cut(s) 912, 915
FokI GGATG 3 cut(s) 1562, 1624, 1687
FriOI GRGCYC 3 cut(s) 1066, 1629, 1674
Fsp4HI GCNGC 2 cut(s) 912, 915
FspBI CTAG 8 cut(s) 105, 243, 309, 1199, 1329, 1343, 1464, 1743
FspI TGCGCA 1 cut(s) 1022
GlaI GCGC 2 cut(s) 454, 1022
GluI GCNGC 2 cut(s) 912, 915
GsuI CTGGAG 1 cut(s) 1313
HaeIII GGCC 2 cut(s) 5, 1129
HapII CCGG 1 cut(s) 1114
HgaI GACGC 1 cut(s) 561
HhaI GCGC 2 cut(s) 455, 1023
Hin1I GRCGYC 1 cut(s) 553
Hin1II CATG 8 cut(s) 461, 468, 758, 899, 1279, 1351, 1498, 1624
Hin6I GCGC 2 cut(s) 453, 1021
HinP1I GCGC 2 cut(s) 453, 1021
HincII GTYRAC 5 cut(s) 432, 973, 1122, 1492, 1689
HindII GTYRAC 5 cut(s) 432, 973, 1122, 1492, 1689
HpaI GTTAAC 1 cut(s) 973
HpaII CCGG 1 cut(s) 1114
HphI GGTGA 4 cut(s) 36, 173, 215, 362
Hpy188III TCNNGA 5 cut(s) 110, 382, 677, 743, 1199
Hpy99I CGWCG 2 cut(s) 555, 744
HpyAV CCTTC 6 cut(s) 57, 289, 325, 423, 566, 986
HpyCH4III ACNGT 5 cut(s) 623, 923, 1000, 1441, 1489
HpyCH4IV ACGT 3 cut(s) 354, 390, 1373
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 309, 1027, 1235, 1343
HpySE526I ACGT 3 cut(s) 354, 390, 1373
Hsp92I GRCGYC 1 cut(s) 553
Hsp92II CATG 8 cut(s) 461, 468, 758, 899, 1279, 1351, 1498, 1624
HspAI GCGC 2 cut(s) 453, 1021
KroI GCCGGC 1 cut(s) 1113
KroNI GCCGGC 1 cut(s) 1115
KspAI GTTAAC 1 cut(s) 973
Kzo9I GATC 6 cut(s) 529, 668, 673, 925, 1177, 1267
LmnI GCTCC 2 cut(s) 1061, 1624
Lsp1109I GCAGC 2 cut(s) 898, 926
LweI GCATC 8 cut(s) 175, 693, 1008, 1079, 1225, 1247, 1493, 1602
MaeI CTAG 8 cut(s) 105, 243, 309, 1199, 1329, 1343, 1464, 1743
MaeII ACGT 3 cut(s) 354, 390, 1373
MaeIII GTNAC 2 cut(s) 350, 937
MalI GATC 6 cut(s) 531, 670, 675, 927, 1179, 1269
MboI GATC 6 cut(s) 529, 668, 673, 925, 1177, 1267
MboII GAAGA 8 cut(s) 18, 78, 279, 501, 599, 1239, 1315, 1459
MflI RGATCY 2 cut(s) 529, 673
MhlI GDGCHC 5 cut(s) 444, 1066, 1586, 1629, 1674
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 4 cut(s) 455, 824, 878, 1449
MmeI TCCRAC 2 cut(s) 337, 1449
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 1 cut(s) 1240
MroNI GCCGGC 1 cut(s) 1113
MscI TGGCCA 1 cut(s) 5
MseI TTAA 4 cut(s) 561, 729, 972, 1424
MslI CAYNNNNRTG 2 cut(s) 759, 1013
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 14
MspI CCGG 1 cut(s) 1114
MspR9I CCNGG 2 cut(s) 1292, 1532
MvaI CCWGG 2 cut(s) 1292, 1532
MwoI GCNNNNNNNGC 5 cut(s) 11, 309, 1027, 1235, 1343
NaeI GCCGGC 1 cut(s) 1115
NcoI CCATGG 1 cut(s) 1347
NdeII GATC 6 cut(s) 529, 668, 673, 925, 1177, 1267
NgoMIV GCCGGC 1 cut(s) 1113
NheI GCTAGC 1 cut(s) 1342
NlaIII CATG 8 cut(s) 461, 468, 758, 899, 1279, 1351, 1498, 1624
NlaIV GGNNCC 2 cut(s) 786, 1585
NmeAIII GCCGAG 1 cut(s) 1693
NmuCI GTSAC 1 cut(s) 350
NsbI TGCGCA 1 cut(s) 1022
NsiI ATGCAT 1 cut(s) 1240
PdiI GCCGGC 1 cut(s) 1115
PfeI GAWTC 6 cut(s) 164, 209, 746, 804, 1219, 1472
PflFI GACNNNGTC 2 cut(s) 1372, 1637
PflMI CCANNNNNTGG 3 cut(s) 157, 526, 1258
PfoI TCCNGGA 1 cut(s) 1530
PkrI GCNGC 2 cut(s) 913, 916
PleI GAGTC 4 cut(s) 455, 824, 877, 1449
PpsI GAGTC 4 cut(s) 455, 824, 877, 1449
Ppu21I YACGTR 1 cut(s) 391
PshBI ATTAAT 1 cut(s) 729
Psp124BI GAGCTC 3 cut(s) 1066, 1629, 1674
Psp6I CCWGG 2 cut(s) 1290, 1530
PspGI CCWGG 2 cut(s) 1290, 1530
PspN4I GGNNCC 2 cut(s) 786, 1585
PspPI GGNCC 2 cut(s) 148, 784
PstI CTGCAG 1 cut(s) 916
PsuI RGATCY 2 cut(s) 529, 673
PsyI GACNNNGTC 2 cut(s) 1372, 1637
PvuII CAGCTG 1 cut(s) 14
RsaI GTAC 1 cut(s) 1289
RsaNI GTAC 1 cut(s) 1288
RseI CAYNNNNRTG 2 cut(s) 759, 1013
SacI GAGCTC 3 cut(s) 1066, 1629, 1674
SaqAI TTAA 4 cut(s) 561, 729, 972, 1424
SatI GCNGC 2 cut(s) 912, 915
Sau3AI GATC 6 cut(s) 529, 668, 673, 925, 1177, 1267
Sau96I GGNCC 2 cut(s) 148, 784
SchI GAGTC 4 cut(s) 455, 824, 878, 1449
ScrFI CCNGG 2 cut(s) 1292, 1532
SduI GDGCHC 5 cut(s) 444, 1066, 1586, 1629, 1674
SfaNI GCATC 8 cut(s) 175, 693, 1008, 1079, 1225, 1247, 1493, 1602
SfcI CTRYAG 2 cut(s) 651, 912
SinI GGWCC 2 cut(s) 148, 784
SmiMI CAYNNNNRTG 2 cut(s) 759, 1013
SmlI CTYRAG 4 cut(s) 382, 1396, 1574, 1628
SmoI CTYRAG 4 cut(s) 382, 1396, 1574, 1628
SsiI CCGC 4 cut(s) 1100, 1117, 1213, 1229
SspI AATATT 1 cut(s) 543
SspMI CTAG 8 cut(s) 105, 243, 309, 1199, 1329, 1343, 1464, 1743
SstI GAGCTC 3 cut(s) 1066, 1629, 1674
StyD4I CCNGG 2 cut(s) 1290, 1530
StyI CCWWGG 1 cut(s) 1347
TaaI ACNGT 5 cut(s) 623, 923, 1000, 1441, 1489
TaiI ACGT 3 cut(s) 357, 393, 1376
TaqI TCGA 3 cut(s) 546, 872, 1180
TfiI GAWTC 6 cut(s) 164, 209, 746, 804, 1219, 1472
Tru1I TTAA 4 cut(s) 561, 729, 972, 1424
Tru9I TTAA 4 cut(s) 561, 729, 972, 1424
TscAI CASTG 2 cut(s) 626, 1444
TseFI GTSAC 1 cut(s) 350
TseI GCWGC 2 cut(s) 911, 914
Tsp45I GTSAC 1 cut(s) 350
TspDTI ATGAA 6 cut(s) 344, 378, 903, 1292, 1496, 1609
TspGWI ACGGA 1 cut(s) 696
TspRI CASTG 2 cut(s) 626, 1444
Tth111I GACNNNGTC 2 cut(s) 1372, 1637
Van91I CCANNNNNTGG 3 cut(s) 157, 526, 1258
VneI GTGCAC 1 cut(s) 440
VpaK11BI GGWCC 2 cut(s) 148, 784
VspI ATTAAT 1 cut(s) 729
XapI RAATTY 2 cut(s) 982, 1182
XbaI TCTAGA 1 cut(s) 1198
XcmI CCANNNNNNNNNTGG 2 cut(s) 59, 1345
XmiI GTMKAC 2 cut(s) 395, 469
XspI CTAG 8 cut(s) 105, 243, 309, 1199, 1329, 1343, 1464, 1743
Zsp2I ATGCAT 1 cut(s) 1240
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.