Rroxscaffold_5G00356810

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Forward (+)
36222540 .. 36226558
4019 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00356810.1

Sequence Viewer

Length: 2358 bp
ATGCAACTGGGTAGTGTTACTTTGTTTTTCTTATTCATCTTCTGTTTGCTTCTGTCACAGTATGACGCTGAAGTATATAACATAACTCCTTCACACCCATTATCCGAGGGAGAAACTCTAGTCTCTCCTGGCCTAATATTCGAATTGGGCTTCTTCAGTCCTAATAGTTCTGGTAACAAGTATGTGGGGATATGGCATAAGGAAATATTTCCTCGTAAAGTAGTATGGGTGGCTAACAGAGATAAGCCTCTTGCTCTTATAGACACCCTTGCTAGTTTGAGAGTTAGCAGCAATGGGAGTCTGGAGCTTGTAGATGGGAAGCAGAATTCTGTGTGGTCAACCAATGATACTATACAGGTTTCATCATCTAATACTAGTTCAGTTGCTGCCGTTCTTTCAGACGATGGAAACTTTGTCGTTATCGGAGCTGGTGAATCAATATGGGAGAGCTTTCATCATCCTTGTGACACTCTGCTACCAAACATGATGTCAGGATACGATATTAAAACTGGAAAAAGCCTTTTCTTGACTTCCTGGAAAAGTGAGAGTGATCCATCTAGTGGGATATATACAAATGAACTCGGACGGCGAACAGATATGCCAGCACAAGATATCATTTGGATTAATCGATCAATTCCCTTCTGGAGAAGTGGGCCATGGGATAAATCAAAGTACATCGGCACAGGTATGGATGATCGATATCTTAATGGATTTAAACTAGATGAAAATGTGGAACAGGGAACAAGGTATTTCTCTTATAGCTTACCTGATAAAACTCTAGCATATGTAGACCTGTCTTCACAGGGAAAGATGAAGTTTATGAGTTCAGAAAATGGAAGGAACTGGTCACTCTACCTCGAGGAACAAAAGAACCGATGTGACATCTATGGAGCATGTGGGCCTTATGGGTTTTGCAGCGCTTCTGAATCTCCAATCTGCAAGTGTTTGAAAGGGTTTGTACCAAAGTCACACCAGGAATGGAGCAAAGGAGACTGGACCAGTGGGTGTGTAAGGAAAACCGAATTGTTCTGTGAGAGACAAACAAATAAGAAGTCAGTACCATTGCAAGGAAAACAAGATGATAATGATGATGGGTTTTGGAAGATCATACGGGCGAAAGTACCAGATTATCATCAGTATATTACATCTTTGGATCTTGAAGACAAGTTCAATGACTGCAAGATACAAGAACTGGGTGAAGCAATGCCAATTAAGTTGATTGCCTATCTTACAGCTATTGCTTTAATGATTATCTTGGTTGCCATAGTGTTCGGTTTGCACAGGTTGCGAGCTAAGCGAAAGGAATTGATTCCAATTTCTAGGGACACTCTTCGAGAATATATTGGAAAACACGATCCATCAGAGCTATTGATCTACGATTTTAATGCCATATTAACTGCTACAGACAATTTCAGCATTACAAACAAACTCGGGCAAGGAGGCTTTGGTCCTGTTTATAAGGGTATGCTACAAGATGGGAAGGAAATAGCTGTAAAAAGACTATCTAGTAGCTCCGGACAAGGCATTGAAGAGTTCAAGAATGAGATGCTGTTGATCTCCAATCTTCAACATAAAAATCTTCTTAGGATATTGGGTTGCTGCGTTAAAGAGGATGAGAAGTTACTGATTTACGATGCAAAACTCATCTTCACCTATCTTCTTATTTCAATGAAAGTATCTTTGCTGTTTGTAAATGTCGAACTTGGGGCAACCATGAAAATTACATTGAAAAGGCTTATTTATCTCCATCATGATTCGTATGTGAAGGTGATACATAGGGATTTGAAAGTCAGCAACATTCTCTTAGATGAGAAAATGAATCCAAAGATTTCAGATTTCGGATTAGCACGCATAGTTGAAGGAACACAAAATCTAGAAAATACACAGAAAGTTGTTGGAACACGTGGCTATATGTCTCCGGAGTATGCAATGAGAGGACTGTTTTCTGAAAAATCCGATGTCTATAGCTTCGGGGTATTGGTCTTGGAAATTATTAGCGGCAAGAAGAATACCAGCTTCTCTTTATATGACCAACAACTAGGCTTTCTAGCCTATGCATGGAACTTGTGGAATGAAGACAAGGGATTGGAGTTGGTAGATGAAATATTGGGCGATTCATATTCCTCATCGGAAGTATTGAAATGCATGCATATTGGGCTTCTGTGTGTACAAGACAATGCTATGGATAGGCCAACCATGGCGGATATAGCTTTGATGTTAAGCAGTGAGAAAGATGGTCCACAACCTAAGCTGCCTGTATTCACTATCCAAAACTTAGCTTATCATCCTCGACCGCACTTTGAAAATACTCATTCCTCCAAAAATGAAGCTAGCATTACAATGATTGAAGGTCGATAA

Protein Analysis

785

Amino Acids

88.51

Weight (kDa)

6.04

Isoelectric Point (pI)

37.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 74 - 180 1.7e-27 D-mannose binding lectin
S_locus_glycop PF00954 215 - 323 1.2e-26 S-locus glycoprotein domain
Pkinase PF00069 472 - 672 1.7e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 473 - 736 6e-36 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1458
AbsI CCTCGAGG 1 cut(s) 857
AccB7I CCANNNNNTGG 1 cut(s) 560
AccI GTMKAC 1 cut(s) 789
AccIII TCCGGA 2 cut(s) 1514, 1918
AciI CCGC 3 cut(s) 1998, 2201, 2294
AclWI GGATC 3 cut(s) 545, 1161, 1349
AcsI RAATTY 1 cut(s) 325
AcuI CTGAAG 2 cut(s) 90, 139
AcvI CACGTG 1 cut(s) 1904
AfaI GTAC 5 cut(s) 674, 960, 1059, 1122, 2169
AfeI AGCGCT 1 cut(s) 919
AfiI CCNNNNNNNGG 3 cut(s) 560, 1067, 2058
AflIII ACRYGT 1 cut(s) 1901
AhlI ACTAGT 1 cut(s) 374
AjnI CCWGG 3 cut(s) 127, 533, 972
Alw26I GTCTC 4 cut(s) 127, 984, 1030, 1920
AlwI GGATC 3 cut(s) 545, 1161, 1349
AlwNI CAGNNNCTG 1 cut(s) 386
Ama87I CYCGRG 2 cut(s) 857, 1430
Aor13HI TCCGGA 2 cut(s) 1514, 1918
Aor51HI AGCGCT 1 cut(s) 919
AoxI GGCC 4 cut(s) 130, 653, 899, 2189
ApeKI GCWGC 5 cut(s) 288, 386, 915, 1599, 2251
ApoI RAATTY 1 cut(s) 325
ArsI GACNNNNNNTTYG 4 cut(s) 473, 505, 1037, 1069
AseI ATTAAT 1 cut(s) 624
Asp700I GAANNNNTTC 2 cut(s) 207, 1308
AspLEI GCGC 1 cut(s) 920
AspS9I GGNCC 5 cut(s) 653, 899, 996, 1448, 2237
AsuHPI GGTGA 4 cut(s) 443, 1208, 1642, 1780
AsuII TTCGAA 1 cut(s) 141
AsuNHI GCTAGC 1 cut(s) 2330
AvaI CYCGRG 2 cut(s) 857, 1430
AvaII GGWCC 3 cut(s) 996, 1448, 2237
BbrPI CACGTG 1 cut(s) 1904
BbsI GAAGAC 3 cut(s) 789, 1167, 2082
BbvI GCAGC 5 cut(s) 300, 373, 927, 1586, 2238
BccI CCATC 8 cut(s) 308, 398, 562, 1085, 1366, 1469, 1755, 2228
BceAI ACGGC 2 cut(s) 374, 602
BcgI CGANNNNNNTGC 2 cut(s) 1367, 1401
BciT130I CCWGG 3 cut(s) 129, 535, 974
BciVI GTATCC 1 cut(s) 488
BcoDI GTCTC 4 cut(s) 127, 984, 1030, 1920
BcuI ACTAGT 1 cut(s) 374
BfmI CTRYAG 2 cut(s) 1401, 1963
BfoI RGCGCY 1 cut(s) 921
BfuI GTATCC 1 cut(s) 488
BisI GCNGC 6 cut(s) 289, 387, 916, 1600, 1999, 2252
BlpI GCTNAGC 1 cut(s) 1293
BlsI GCNGC 6 cut(s) 290, 388, 917, 1601, 2000, 2253
Bme1390I CCNGG 3 cut(s) 129, 535, 974
Bme18I GGWCC 3 cut(s) 996, 1448, 2237
BmeT110I CYCGRG 2 cut(s) 857, 1430
BmgT120I GGNCC 5 cut(s) 653, 899, 996, 1448, 2237
BmrFI CCNGG 3 cut(s) 129, 535, 974
BmrI ACTGGG 2 cut(s) 17, 1202
BmsI GCATC 2 cut(s) 1536, 1624
BmtI GCTAGC 1 cut(s) 2334
BmuI ACTGGG 2 cut(s) 17, 1202
BpiI GAAGAC 3 cut(s) 789, 1167, 2082
BpmI CTGGAG 2 cut(s) 323, 664
Bpu10I CCTNAGC 1 cut(s) 2247
Bpu1102I GCTNAGC 1 cut(s) 1293
Bpu14I TTCGAA 1 cut(s) 141
Bsa29I ATCGAT 2 cut(s) 628, 697
BsaAI YACGTR 1 cut(s) 1904
BsaBI GATNNNNATC 2 cut(s) 699, 1131
BsaJI CCNNGG 3 cut(s) 105, 656, 2196
BsaWI WCCGGW 2 cut(s) 1514, 1918
Bsc4I CCNNNNNNNGG 3 cut(s) 560, 1067, 2058
Bse1I ACTGG 6 cut(s) 12, 514, 848, 998, 999, 1197
Bse3DI GCAATG 4 cut(s) 298, 1061, 1209, 1935
Bse8I GATNNNNATC 2 cut(s) 699, 1131
BseAI TCCGGA 2 cut(s) 1514, 1918
BseBI CCWGG 3 cut(s) 129, 535, 974
BseCI ATCGAT 2 cut(s) 628, 697
BseDI CCNNGG 3 cut(s) 105, 656, 2196
BseGI GGATG 4 cut(s) 457, 697, 1618, 2284
BseJI GATNNNNATC 2 cut(s) 699, 1131
BseLI CCNNNNNNNGG 3 cut(s) 560, 1067, 2058
BseMI GCAATG 4 cut(s) 298, 1061, 1209, 1935
BseNI ACTGG 6 cut(s) 12, 514, 848, 998, 999, 1197
BseXI GCAGC 5 cut(s) 300, 373, 927, 1586, 2238
Bsh1285I CGRYCG 1 cut(s) 2294
BshFI GGCC 4 cut(s) 132, 655, 901, 2191
BshVI ATCGAT 2 cut(s) 628, 697
BsiEI CGRYCG 1 cut(s) 2294
BsiHKCI CYCGRG 2 cut(s) 857, 1430
BsiSI CCGG 2 cut(s) 1515, 1919
BslFI GGGAC 1 cut(s) 1337
BslI CCNNNNNNNGG 3 cut(s) 560, 1067, 2058
BsmAI GTCTC 4 cut(s) 127, 984, 1030, 1920
BsmFI GGGAC 1 cut(s) 1337
BsnI GGCC 4 cut(s) 132, 655, 901, 2191
BsoBI CYCGRG 2 cut(s) 857, 1430
Bsp119I TTCGAA 1 cut(s) 141
Bsp13I TCCGGA 2 cut(s) 1514, 1918
Bsp1407I TGTACA 1 cut(s) 2167
Bsp143I GATC 8 cut(s) 550, 629, 694, 1104, 1153, 1354, 1371, 1554
Bsp1720I GCTNAGC 1 cut(s) 1293
Bsp19I CCATGG 2 cut(s) 656, 2196
BspACI CCGC 3 cut(s) 1998, 2201, 2294
BspANI GGCC 4 cut(s) 132, 655, 901, 2191
BspDI ATCGAT 2 cut(s) 628, 697
BspEI TCCGGA 2 cut(s) 1514, 1918
BspHI TCATGA 1 cut(s) 1750
BspOI GCTAGC 1 cut(s) 2334
BspPI GGATC 3 cut(s) 545, 1161, 1349
BspT104I TTCGAA 1 cut(s) 141
BsrDI GCAATG 4 cut(s) 298, 1061, 1209, 1935
BsrGI TGTACA 1 cut(s) 2167
BsrI ACTGG 6 cut(s) 12, 514, 848, 998, 999, 1197
BssECI CCNNGG 3 cut(s) 105, 656, 2196
BssMI GATC 8 cut(s) 550, 629, 694, 1104, 1153, 1354, 1371, 1554
BssT1I CCWWGG 2 cut(s) 656, 2196
Bst2UI CCWGG 3 cut(s) 129, 535, 974
Bst4CI ACNGT 2 cut(s) 60, 1941
Bst6I CTCTTC 2 cut(s) 1335, 1524
BstAPI GCANNNNNTGC 1 cut(s) 1285
BstAUI TGTACA 1 cut(s) 2167
BstBAI YACGTR 1 cut(s) 1904
BstBI TTCGAA 1 cut(s) 141
BstC8I GCNNGC 5 cut(s) 603, 1290, 1849, 2147, 2332
BstDEI CTNAG 5 cut(s) 1293, 1583, 1804, 2247, 2275
BstDSI CCRYGG 2 cut(s) 656, 2196
BstF5I GGATG 4 cut(s) 457, 697, 1618, 2284
BstH2I RGCGCY 1 cut(s) 921
BstHHI GCGC 1 cut(s) 920
BstKTI GATC 8 cut(s) 553, 632, 697, 1107, 1156, 1357, 1374, 1557
BstMAI GTCTC 4 cut(s) 127, 984, 1030, 1920
BstMBI GATC 8 cut(s) 550, 629, 694, 1104, 1153, 1354, 1371, 1554
BstMCI CGRYCG 1 cut(s) 2294
BstMWI GCNNNNNNNGC 4 cut(s) 1285, 1294, 2155, 2207
BstNI CCWGG 3 cut(s) 129, 535, 974
BstNSI RCATGY 2 cut(s) 897, 2149
BstSCI CCNGG 3 cut(s) 127, 533, 972
BstSFI CTRYAG 2 cut(s) 1401, 1963
BstV1I GCAGC 5 cut(s) 300, 373, 927, 1586, 2238
BstV2I GAAGAC 3 cut(s) 789, 1167, 2082
BstX2I RGATCY 1 cut(s) 1153
BstYI RGATCY 1 cut(s) 1153
Bsu15I ATCGAT 2 cut(s) 628, 697
BsuI GTATCC 1 cut(s) 488
BsuRI GGCC 4 cut(s) 132, 655, 901, 2191
BsuTUI ATCGAT 2 cut(s) 628, 697
BtgI CCRYGG 2 cut(s) 656, 2196
BtsCI GGATG 4 cut(s) 457, 697, 1618, 2284
BtsI GCAGTG 1 cut(s) 2230
BtsIMutI CAGTG 2 cut(s) 1006, 2230
Cac8I GCNNGC 5 cut(s) 603, 1290, 1849, 2147, 2332
CaiI CAGNNNCTG 1 cut(s) 386
CciI TCATGA 1 cut(s) 1750
CfoI GCGC 1 cut(s) 920
Cfr13I GGNCC 5 cut(s) 653, 899, 996, 1448, 2237
ClaI ATCGAT 2 cut(s) 628, 697
CseI GACGC 1 cut(s) 74
Csp6I GTAC 5 cut(s) 673, 959, 1058, 1121, 2168
CviAII CATG 8 cut(s) 484, 657, 894, 1714, 1751, 2058, 2146, 2197
CviQI GTAC 5 cut(s) 673, 959, 1058, 1121, 2168
DdeI CTNAG 5 cut(s) 1293, 1583, 1804, 2247, 2275
DpnI GATC 8 cut(s) 552, 631, 696, 1106, 1155, 1356, 1373, 1556
DpnII GATC 8 cut(s) 550, 629, 694, 1104, 1153, 1354, 1371, 1554
DraI TTTAAA 1 cut(s) 715
Eam1104I CTCTTC 2 cut(s) 1335, 1524
EarI CTCTTC 2 cut(s) 1335, 1524
EciI GGCGGA 1 cut(s) 2216
Eco130I CCWWGG 2 cut(s) 656, 2196
Eco32I GATATC 2 cut(s) 613, 701
Eco47I GGWCC 3 cut(s) 996, 1448, 2237
Eco47III AGCGCT 1 cut(s) 919
Eco57I CTGAAG 2 cut(s) 90, 139
Eco72I CACGTG 1 cut(s) 1904
Eco88I CYCGRG 2 cut(s) 857, 1430
EcoRI GAATTC 1 cut(s) 325
EcoRII CCWGG 3 cut(s) 127, 533, 972
EcoRV GATATC 2 cut(s) 613, 701
EcoT14I CCWWGG 2 cut(s) 656, 2196
EcoT22I ATGCAT 3 cut(s) 2059, 2147, 2151
ErhI CCWWGG 2 cut(s) 656, 2196
FaeI CATG 8 cut(s) 487, 660, 897, 1717, 1754, 2061, 2149, 2200
FaqI GGGAC 1 cut(s) 1337
FatI CATG 8 cut(s) 483, 656, 893, 1713, 1750, 2057, 2145, 2196
FauNDI CATATG 1 cut(s) 784
FblI GTMKAC 1 cut(s) 789
Fnu4HI GCNGC 6 cut(s) 289, 387, 916, 1600, 1999, 2252
FokI GGATG 4 cut(s) 444, 704, 1625, 2271
Fsp4HI GCNGC 6 cut(s) 289, 387, 916, 1600, 1999, 2252
GlaI GCGC 1 cut(s) 919
GluI GCNGC 6 cut(s) 289, 387, 916, 1600, 1999, 2252
GsuI CTGGAG 2 cut(s) 323, 664
HaeII RGCGCY 1 cut(s) 921
HaeIII GGCC 4 cut(s) 132, 655, 901, 2191
HapII CCGG 2 cut(s) 1515, 1919
HgaI GACGC 1 cut(s) 74
HhaI GCGC 1 cut(s) 920
Hin1II CATG 8 cut(s) 487, 660, 897, 1717, 1754, 2061, 2149, 2200
Hin6I GCGC 1 cut(s) 918
HinP1I GCGC 1 cut(s) 918
HincII GTYRAC 1 cut(s) 339
HindII GTYRAC 1 cut(s) 339
HinfI GANTC 7 cut(s) 298, 434, 926, 1309, 1754, 1819, 2114
HpaII CCGG 2 cut(s) 1515, 1919
HphI GGTGA 4 cut(s) 443, 1208, 1642, 1780
Hpy166II GTNNAC 4 cut(s) 339, 790, 2168, 2240
Hpy8I GTNNAC 4 cut(s) 339, 790, 2168, 2240
HpyAV CCTTC 7 cut(s) 99, 649, 831, 1474, 1759, 1853, 2342
HpyCH4III ACNGT 2 cut(s) 60, 1941
HpyCH4IV ACGT 1 cut(s) 1903
HpyF10VI GCNNNNNNNGC 4 cut(s) 1285, 1294, 2155, 2207
HpyF3I CTNAG 5 cut(s) 1293, 1583, 1804, 2247, 2275
HpySE526I ACGT 1 cut(s) 1903
Hsp92II CATG 8 cut(s) 487, 660, 897, 1717, 1754, 2061, 2149, 2200
HspAI GCGC 1 cut(s) 918
Kpn2I TCCGGA 2 cut(s) 1514, 1918
Kzo9I GATC 8 cut(s) 550, 629, 694, 1104, 1153, 1354, 1371, 1554
LmnI GCTCC 5 cut(s) 304, 425, 890, 981, 1517
Lsp1109I GCAGC 5 cut(s) 300, 373, 927, 1586, 2238
LweI GCATC 2 cut(s) 1536, 1624
MaeII ACGT 1 cut(s) 1903
MaeIII GTNAC 8 cut(s) 16, 54, 173, 464, 846, 878, 966, 1620
MalI GATC 8 cut(s) 552, 631, 696, 1106, 1155, 1356, 1373, 1556
MboI GATC 8 cut(s) 550, 629, 694, 1104, 1153, 1354, 1371, 1554
MflI RGATCY 1 cut(s) 1153
MlyI GAGTC 1 cut(s) 307
MmeI TCCRAC 1 cut(s) 1876
Mph1103I ATGCAT 3 cut(s) 2059, 2147, 2151
MroI TCCGGA 2 cut(s) 1514, 1918
MroXI GAANNNNTTC 2 cut(s) 207, 1308
MslI CAYNNNNRTG 3 cut(s) 462, 686, 2339
MspI CCGG 2 cut(s) 1515, 1919
MspR9I CCNGG 3 cut(s) 129, 535, 974
MvaI CCWGG 3 cut(s) 129, 535, 974
MwoI GCNNNNNNNGC 4 cut(s) 1285, 1294, 2155, 2207
NcoI CCATGG 2 cut(s) 656, 2196
NdeI CATATG 1 cut(s) 784
NdeII GATC 8 cut(s) 550, 629, 694, 1104, 1153, 1354, 1371, 1554
NheI GCTAGC 1 cut(s) 2330
NlaIII CATG 8 cut(s) 487, 660, 897, 1717, 1754, 2061, 2149, 2200
NmuCI GTSAC 5 cut(s) 54, 464, 846, 878, 966
NsiI ATGCAT 3 cut(s) 2059, 2147, 2151
NspI RCATGY 2 cut(s) 897, 2149
NspV TTCGAA 1 cut(s) 141
PaeI GCATGC 1 cut(s) 2149
PaeR7I CTCGAG 1 cut(s) 857
PagI TCATGA 1 cut(s) 1750
PdmI GAANNNNTTC 2 cut(s) 207, 1308
PfeI GAWTC 6 cut(s) 434, 926, 1309, 1754, 1819, 2114
PflMI CCANNNNNTGG 1 cut(s) 560
PfoI TCCNGGA 1 cut(s) 533
PkrI GCNGC 6 cut(s) 290, 388, 917, 1601, 2000, 2253
PleI GAGTC 1 cut(s) 306
PmaCI CACGTG 1 cut(s) 1904
PmlI CACGTG 1 cut(s) 1904
PpsI GAGTC 1 cut(s) 306
Ppu21I YACGTR 1 cut(s) 1904
PshBI ATTAAT 1 cut(s) 624
PsiI TTATAA 1 cut(s) 1458
Psp6I CCWGG 3 cut(s) 127, 533, 972
PspCI CACGTG 1 cut(s) 1904
PspGI CCWGG 3 cut(s) 127, 533, 972
PspPI GGNCC 5 cut(s) 653, 899, 996, 1448, 2237
PspXI VCTCGAGB 1 cut(s) 857
PstNI CAGNNNCTG 1 cut(s) 386
PsuI RGATCY 1 cut(s) 1153
RsaI GTAC 5 cut(s) 674, 960, 1059, 1122, 2169
RsaNI GTAC 5 cut(s) 673, 959, 1058, 1121, 2168
RseI CAYNNNNRTG 3 cut(s) 462, 686, 2339
SatI GCNGC 6 cut(s) 289, 387, 916, 1600, 1999, 2252
Sau3AI GATC 8 cut(s) 550, 629, 694, 1104, 1153, 1354, 1371, 1554
Sau96I GGNCC 5 cut(s) 653, 899, 996, 1448, 2237
SchI GAGTC 1 cut(s) 307
ScrFI CCNGG 3 cut(s) 129, 535, 974
SfaNI GCATC 2 cut(s) 1536, 1624
SfcI CTRYAG 2 cut(s) 1401, 1963
Sfr274I CTCGAG 1 cut(s) 857
SfuI TTCGAA 1 cut(s) 141
SinI GGWCC 3 cut(s) 996, 1448, 2237
SlaI CTCGAG 1 cut(s) 857
SmiMI CAYNNNNRTG 3 cut(s) 462, 686, 2339
SmlI CTYRAG 1 cut(s) 857
SmoI CTYRAG 1 cut(s) 857
SpeI ACTAGT 1 cut(s) 374
SphI GCATGC 1 cut(s) 2149
SsiI CCGC 3 cut(s) 1998, 2201, 2294
SspI AATATT 3 cut(s) 138, 207, 2106
StyD4I CCNGG 3 cut(s) 127, 533, 972
StyI CCWWGG 2 cut(s) 656, 2196
TaaI ACNGT 2 cut(s) 60, 1941
TaiI ACGT 1 cut(s) 1906
TaqI TCGA 8 cut(s) 141, 628, 697, 858, 1333, 1698, 2290, 2353
TatI WGTACW 2 cut(s) 672, 2167
TauI GCSGC 1 cut(s) 2001
TfiI GAWTC 6 cut(s) 434, 926, 1309, 1754, 1819, 2114
TscAI CASTG 2 cut(s) 1006, 2230
TseFI GTSAC 5 cut(s) 54, 464, 846, 878, 966
TseI GCWGC 5 cut(s) 288, 386, 915, 1599, 2251
Tsp45I GTSAC 5 cut(s) 54, 464, 846, 878, 966
TspRI CASTG 2 cut(s) 1006, 2230
Van91I CCANNNNNTGG 1 cut(s) 560
VpaK11BI GGWCC 3 cut(s) 996, 1448, 2237
VspI ATTAAT 1 cut(s) 624
XapI RAATTY 1 cut(s) 325
XbaI TCTAGA 1 cut(s) 1873
XceI RCATGY 2 cut(s) 897, 2149
XhoI CTCGAG 1 cut(s) 857
XmiI GTMKAC 1 cut(s) 789
XmnI GAANNNNTTC 2 cut(s) 207, 1308
Zsp2I ATGCAT 3 cut(s) 2059, 2147, 2151
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.