Rw1G012760

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Reverse (-)
28342795 .. 28392436
49642 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G012760.1

Sequence Viewer

Length: 5121 bp
ATGTTCTTCTTCCTTTTCATCTTCTTATTCAGCTTGCTTCCATCACATTATCATTGTGCTGAAGTTGATCAGATAACTCTTTTGCAACCGTTAGCGCAGGGACAAATTCTAGTTTCCCCTGGCCACATTTTTGAGTTGGGCTTCTTCAGTCCTAATAACTCTGCTAAGAAGTATGTGGGGATATGGCACAAAGATATATCTCCGCGTAAAGTTGTATGGGTGGCCAACAGAGAAAAGCCTCTTGCAGTTGCAGACACCTCAGCGAGTTTGACAGTTACTAGCAATGGGAATCTGAAGCTTGTAGATGGGAAACAAAAGTCTATATGGTCTACTAATATTGCTTCTTTGGTGTCATCATCGAATACTAGTTCAGTTGCTGCAGTTCTCTTAGATAATGGAAACTTTGTTGTCAATGATCATCTGGGAGCTGAGTTGTGGAAGAGCTTTGATTATCCTGGTGACACAATCCTACCGAACATGGTGTTGCGAGACAGTAAGTCTGGAAAGGGGCACTTCTTGAGCTCTTGGAAAGCAGAGAATGATCCATCACCAGGGAAATTCTTACTTGGATTGCCCCCACAGGCGCCATCACAAGTAAGTGGTCCATGGGATAAGTCGAGTTTCATTGGTGTACCAGAAATGGATCGTCGATATATAAATGGCTTTAGTGTGGATGATAACTTAAAGCAGGGCACAGTGGATTTCTCTTATAGTTTATATGACAAACCTGTGTCATATATATACATCTCTCCAGAAGGAATAGTGAGGCTTAGATTTTCGAAGAATGATGGGAAGTGGTATGATCATTGGCAGAATCCGAAGAATCCATGTGACATCTATGGAGCTTGTGGACCTTTTGGAGTTTGCAAAGCTTCTGCATCTCCTGATGTAGGACGAGAATGGACCCAGTTTAGCCGAAAAACCATAAAAGTAAAGAAGCGGTGTAGAATCAAGAAGAGTTTTGTACCGAAGTCAAGTGCAGAATGGAGCAAAGGAAACTGGACAGGAGGGTGTATGAGGCAGACGAAATTGTTTTGTGAGAGACAAACAAACAAGTCAGTCTCATCAAGAGGAAAAAAAGTTGATGATGATGGGTTTTGGAAGATGGTGAGGTTGAAAATACCAGATTCTCATGAGTTCATTACTGCTCTCAATGCTGAAGAAACGTCCAACGATTGCAAATTACGCTGCCTAAACAATTGTTCTTGCCTTGCTTATGCATTTGTTAATAATATAGGGTGTTTGGTATGGTCCAAAGATCTTATTGATATACAGCAGTTTTCGGCGTCTGTCGACGGAATAGATCTTTATATTCGCCTAGCACGCTCTGAACTAGTTGAAGGAAAGCCAATAAAGTTAATTAGCAGCCTTGCAGCTATTGTTTTTGTGAGTATCTTGGCAGCCATAGTATTCTGTTTTTACAGGAGGCGAGCTAACCAGAAGAGACAGACTCAGAACTTTGAATCGAGTGGTATGATTAAGAGTTCAAGAGATGGTCTCCTAGAATATATAGGAAAGCATGATCCCTTAGAGCTACAGATATATGATTTTGATAGCATACTAATTGCTACAAACAATTTCAGTGTCGCAAACAAACTTGGGCAAGGAGGATTTGGACCAGTTTATAAGGGTATGCTACAAGACGGGAAAGAAGTAGCAGTAAAGAGACTATCTAGTAGCTCAGGACAAGGCATTGAAGAGTTCAAGAACGAGATGTTGTTGATCTACAATCTTCAACATAAAAATCTTGTTAGGATCATGGGTTGTTGTGTTAAAGAGGACGAGAAGTTACTGATTTATGAGTTCATGCCAAACAAAAGCTTGGATACTTTTCTATTCGATACGAGGAAGAGAGTAGTTCTTGATTGGGCGACTCGCTTTAATATTATTCATGGTGTTGCTAGAGGGCTTCTCTATCTCCATTATGATTCGTATGTGAAGGTGATACATAGGGATCTGAAAGTCAGTAACATTCTTTTGGATGAAAAAATGAATCCAAAAATTTCAGATTTTGGATTAGCACGAATAGTTGAAGGAACACAAAATTTAGAAAATACTCAGAAAGTTGTTGGAACACGTGGCTATATGTCTCCAGAGTATGCCATGGGGGGGATATTTTCTGAAAAATCTGATGTCTACAGCTTCGGAGTCTTGGTATTGGAGATTATTAGCAGTAAGAAGAATACCAGATTCTGTTTATATGACCAACAACTAGGCTTTCTAACTTATGCATGGAACTTGTGGAATGAAGGTAGAGGGTTGGAGTTGGTAGATGAAATTCTGGGCGATTCATATTCCTCAACGGAAGTATTGAAATGCATGCATATCGGGCTTCTGTGTGTACAAGACAATGCTGTGGATAGGCCAACCATGGCAGATATAGCTTTGATGTTAAGTAGTGAGAAAGATGGTCCACAACCCAAGCTGCCTCTATTCACTATCCAAATTTCAGCTTTTCATCATCAACCACATTCTGAGAATACTAATTCCTCCAAAAAAGAAATTAAAAATGGATCAATTACCGATCAAAATGGTGGTTGTTGGGTTTCTAGTAGATGTAAATTCATTTGTGCTTTATTAAATGGCTCCATGTTCTTCTTCCTTTTCATCTTCTTATTCAGCTTGCTTCCATCACATTATCATTGTGCTGAAGTTGATCAGATAACTCTTTTGCAACCGTTAGCGCAGGGACAAATTCTTGTTTCCCCTGGCCACATTTTTGAGTTAGGCTTCTTCAGTCCTAATAACTCTACTAAGAAGTATGTGGGGATATGGCACAAAGATATATCTCCGCGTAAAGTTGTATGGGTGGCCAACAGAGAAAAGCCTCTTGCAGTTGCAGACACCTCAGCGAGTTTGACAGTTAATAGCAATGGGAATCTGAAGCTTGTAGATGGGAAACAAAAGTCTATATGGTCTACTAATATTGCTTCTTTGGTGTCATCATCGAATACTAGTTCAGTTGCTGCAGTTCTCTTAGATAATGGAAACTTTGTTGTCAATGATCATCTGGGAGCTGAGTTGTGGAAGAGCTTTGATTATCCTGGTGACACAATCCTACCGAACATGGTGTTGCGAGACGGTAAGTCTGGAAAGGGGCACTTCTTGAGCTCTTGGAAAGCAGAGAATGATCCATCACCAGGGAAATTCTTACTTGGATTGCCCCCACAGGCGCCATCACAAGTGTTCATTTGGATCAATAATGGATCAAATGATTCACATTCAATTCCCTACTGGAGAAGTGGTCCATGGGATAAGTCGAGTTTCATTGGTGTACCAGAAATGGATCGTCGATATATAAATGGCTTTAGTGTGGATGATAACTTAAAGCAGGGCACAGTGGATTTCTCTTATAGTTTATATGACAAACCTGTGTCATATATATACATCTCTCCAGAAGGAATAGTGAGGATTAGATTTTCGAAGAATGATGGGAAGTGGTATGATCATTGGCAGACTCCGAAGAATCCATGTGACATCTATGGAGCTTGTGGACCTTTTGGAGTTTGCAAAGCTTCAGCATCTCCAATCTGTAAGTGTTTGAAAGGTTTTGTACCGAAGTCAAATGCCGAATGGAGCAAAGGAAACTGGACAAGAGGGTGTATGAGGCAGACAAAATTGTTTTGTGAGAGACAAACAAACAAGTTAGTCTCATCAAGAGGAAAAAAAGTTGATGATGATGAGTTTTGGAAGATGGTGAGGTTGAAAATACCAGATTCTCACGAGTTCATTACTGCTCTCAATGCTAAAGAAACGTCCAACGATTGCAAATTACGCTGCCTAAACAACTGTTCTTGCCTTGCTTATGCATTTGTTAATAATATAGGGTGTTTGGTATGGTCCAAAGATCTTATTGATATACAGCAGTTTTCGGCGTCTGTCGACGGAGTAGTTCTTTATATTCGCCTAGCACGCTCTGAACTTGGTGAAGGAAAGCCGATAAAGTTAATTGGCAGCCTTACAGCTATTGTTTTTGTGAGTATCTTGGCAGCCATAGTATTCGGTTTTTACAGGGGGCGAGCTAACCAGAAGAGACAGACTCAGAACTTTGAATCAAGTCGTATGATTAAGAGTTCAAGAGATAGTCTCCTAGAATATATAGGAAAGCATGATCCCTTAGAGCTACAGATATATGATTTTGATAGCATACTAATTGCTACAAACAATTTCAGTGTCGCAAACAAACTCGGGCAAGGAGGATTTGGCCCAGTTTATAAGGGTATGCTACAAGACGGGAAAGAAGTAGCAGTAAAGAGACTATCTAGTAGCTCAGGACAAGGCATTGAAGAGTTCAAGAATGAGATGTTGTTGATCTACAATCTTCAACATAAAAATCTTGTTAGGATCATGGGTTGCTGTGTTAAAGAGGATGAGAAGTTACTGATTTACGAGTTCATGTCAAACAAAAGCTTGGATACTTTTCTATTCGATACGAGGAAGAGAGCAGTTCTTGACTGGGCGACTCGCTTTAATATTATTCATGGTGTTGCTAGAGGGCTTCTCTATCTCCATTATGATTCGTATATGAAGGTGATACATAGGGATCTGAAAGTCAGCAACATTCTCTTGGATGAAAAAATGAATCCAAAAATTTCAGATTTTGGATTAGCACGAATAGTTGAAGGAACACAAAATCTGGAAAATACTCAGAAAGTTGTTGGAACACGTGGCTATATGTCTCCAGAGTATGCCATGGGGGGGATATTTTCTGAAAAATCCGATGTCTACAGCTTTGGAGTCTTGGTCTTGGAGATTATTAGCAGTAAGAAGAATACCAGATTTTGTTTATATGACCAACAGCTAGGCTTTCTAGCTTATGCATGGAACTTGTGGAATGAAGGTAGAGGGTTGGAGTTGGTAGATGATATTTTGGGCGATTCATATTCCTCAACGGAAGTATTGAAATGCATGCATATTGGGCTTCTGTGTGTACAAGACAATGCTATGGATAGGCCAACCATGGCGGATATAGCTTTGATGTTAAGTAGTGAGAAAGATGGTCCACAACCCAAGTTGCCTCTATTCACTATCCAAATTTCAGGTTTTCATCTTCAACCACATTCTAAGAATACTAATTCCTCCAAAAAAGAAGCTAGCATTACAATGATTGAAGGACGATAA

Protein Analysis

1706

Amino Acids

191.58

Weight (kDa)

8.71

Isoelectric Point (pI)

38.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 71 - 177 1.9e-27 D-mannose binding lectin
S_locus_glycop PF00954 200 - 295 1.1e-19 S-locus glycoprotein domain
PAN_2 PF08276 362 - 424 2.1e-15 PAN-like domain
Pkinase PF00069 528 - 726 7.8e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 529 - 734 1.7e-46 Protein tyrosine and serine/threonine kinase
B_lectin PF01453 934 - 1040 4e-27 D-mannose binding lectin
S_locus_glycop PF00954 1079 - 1188 6.2e-30 S-locus glycoprotein domain
PAN_2 PF08276 1225 - 1287 4.7e-15 PAN-like domain
Pkinase PF00069 1391 - 1589 4.7e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 1392 - 1597 1.2e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1626, 4215
AccB1I GGYRCC 2 cut(s) 583, 3172
AccI GTMKAC 6 cut(s) 329, 1293, 2136, 2918, 3882, 4725
AccII CGCG 2 cut(s) 205, 2794
AciI CCGC 4 cut(s) 203, 940, 2792, 4964
AcoI YGGCCR 4 cut(s) 121, 222, 2710, 2811
AcuI CTGAAG 8 cut(s) 81, 130, 314, 1179, 2670, 2719, 2903, 3501
AcvI CACGTG 2 cut(s) 2078, 4667
AcyI GRCGYC 4 cut(s) 584, 1286, 3173, 3875
AfaI GTAC 6 cut(s) 633, 966, 2343, 3276, 3555, 4932
AfiI CCNNNNNNNGG 5 cut(s) 551, 890, 2109, 3140, 4698
AflIII ACRYGT 2 cut(s) 2075, 4664
AhdI GACNNNNNGTC 2 cut(s) 496, 3085
AhlI ACTAGT 3 cut(s) 365, 1333, 2954
AjnI CCWGG 6 cut(s) 118, 454, 550, 2707, 3043, 3139
Alw21I GWGCWC 2 cut(s) 524, 3113
AlwNI CAGNNNCTG 3 cut(s) 377, 2193, 2966
Ama87I CYCGRG 1 cut(s) 4187
AoxI GGCC 7 cut(s) 121, 222, 2363, 2710, 2811, 4204, 4952
AspLEI GCGC 4 cut(s) 97, 586, 2686, 3175
AsuHPI GGTGA 9 cut(s) 470, 540, 1120, 1954, 3059, 3129, 3709, 3938, 4543
AsuII TTCGAA 2 cut(s) 779, 3422
AsuNHI GCTAGC 1 cut(s) 5093
AvaI CYCGRG 1 cut(s) 4187
BaeGI GKGCMC 4 cut(s) 513, 695, 3102, 3338
BalI TGGCCA 4 cut(s) 123, 224, 2712, 2813
BanI GGYRCC 2 cut(s) 583, 3172
BanII GRGCYC 2 cut(s) 524, 3113
BauI CACGAG 1 cut(s) 3722
BbrPI CACGTG 2 cut(s) 2078, 4667
Bbv12I GWGCWC 2 cut(s) 524, 3113
BbvCI CCTCAGC 2 cut(s) 259, 2848
BcgI CGANNNNNNTGC 2 cut(s) 2308, 2342
BciT130I CCWGG 6 cut(s) 120, 456, 552, 2709, 3045, 3141
BciVI GTATCC 2 cut(s) 1819, 4408
BclI TGATCA 6 cut(s) 67, 415, 802, 2656, 3004, 3445
BcuI ACTAGT 3 cut(s) 365, 1333, 2954
BfmI CTRYAG 6 cut(s) 378, 1535, 2137, 2967, 4124, 4726
BfoI RGCGCY 2 cut(s) 587, 3176
BfuI GTATCC 2 cut(s) 1819, 4408
BglII AGATCT 3 cut(s) 1258, 1303, 3847
Bme1390I CCNGG 6 cut(s) 120, 456, 552, 2709, 3045, 3141
BmeRI GACNNNNNGTC 2 cut(s) 496, 3085
BmeT110I CYCGRG 1 cut(s) 4187
BmiI GGNNCC 4 cut(s) 585, 905, 2587, 3174
BmrFI CCNGG 6 cut(s) 120, 456, 552, 2709, 3045, 3141
BmrI ACTGGG 3 cut(s) 901, 4202, 4465
BmsI GCATC 2 cut(s) 887, 3530
BmtI GCTAGC 1 cut(s) 5097
BmuI ACTGGG 3 cut(s) 901, 4202, 4465
BpmI CTGGAG 5 cut(s) 735, 2076, 3256, 3378, 4665
Bpu10I CCTNAGC 4 cut(s) 259, 1681, 2848, 4270
Bpu14I TTCGAA 2 cut(s) 779, 3422
BpuEI CTTGAG 2 cut(s) 538, 3127
BsaAI YACGTR 2 cut(s) 2078, 4667
BsaHI GRCGYC 4 cut(s) 584, 1286, 3173, 3875
BsaI GGTCTC 1 cut(s) 1502
BsaXI ACNNNNNCTCC 6 cut(s) 2139, 2169, 3229, 3259, 4728, 4758
Bsc4I CCNNNNNNNGG 5 cut(s) 551, 890, 2109, 3140, 4698
Bse1I ACTGG 7 cut(s) 907, 1004, 1619, 3239, 3593, 4208, 4460
Bse3DI GCAATG 2 cut(s) 289, 2878
BseBI CCWGG 6 cut(s) 120, 456, 552, 2709, 3045, 3141
BseGI GGATG 5 cut(s) 679, 1987, 3322, 4375, 4576
BseLI CCNNNNNNNGG 5 cut(s) 551, 890, 2109, 3140, 4698
BseMI GCAATG 2 cut(s) 289, 2878
BseNI ACTGG 7 cut(s) 907, 1004, 1619, 3239, 3593, 4208, 4460
BseSI GKGCMC 4 cut(s) 513, 695, 3102, 3338
BsgI GTGCAG 1 cut(s) 999
Bsh1236I CGCG 2 cut(s) 205, 2794
BshFI GGCC 7 cut(s) 123, 224, 2365, 2712, 2813, 4206, 4954
BshNI GGYRCC 2 cut(s) 583, 3172
BsiHKAI GWGCWC 2 cut(s) 524, 3113
BsiHKCI CYCGRG 1 cut(s) 4187
BslFI GGGAC 2 cut(s) 114, 2703
BslI CCNNNNNNNGG 5 cut(s) 551, 890, 2109, 3140, 4698
BsmBI CGTCTC 1 cut(s) 3072
BsmFI GGGAC 2 cut(s) 114, 2703
BsnI GGCC 7 cut(s) 123, 224, 2365, 2712, 2813, 4206, 4954
Bso31I GGTCTC 1 cut(s) 1502
BsoBI CYCGRG 1 cut(s) 4187
Bsp119I TTCGAA 2 cut(s) 779, 3422
Bsp1286I GDGCHC 6 cut(s) 513, 524, 695, 3102, 3113, 3338
Bsp1407I TGTACA 2 cut(s) 2341, 4930
Bsp19I CCATGG 6 cut(s) 605, 2103, 2370, 3248, 4692, 4959
BspACI CCGC 4 cut(s) 203, 940, 2792, 4964
BspANI GGCC 7 cut(s) 123, 224, 2365, 2712, 2813, 4206, 4954
BspFNI CGCG 2 cut(s) 205, 2794
BspHI TCATGA 1 cut(s) 1132
BspLI GGNNCC 4 cut(s) 585, 905, 2587, 3174
BspMAI CTGCAG 2 cut(s) 382, 2971
BspOI GCTAGC 1 cut(s) 5097
BspQI GCTCTTC 2 cut(s) 434, 3023
BspT104I TTCGAA 2 cut(s) 779, 3422
BspT107I GGYRCC 2 cut(s) 583, 3172
BspTNI GGTCTC 1 cut(s) 1502
BsrDI GCAATG 2 cut(s) 289, 2878
BsrGI TGTACA 2 cut(s) 2341, 4930
BsrI ACTGG 7 cut(s) 907, 1004, 1619, 3239, 3593, 4208, 4460
BssNI GRCGYC 4 cut(s) 584, 1286, 3173, 3875
BssSI CACGAG 1 cut(s) 3722
BssT1I CCWWGG 6 cut(s) 605, 2103, 2370, 3248, 4692, 4959
Bst2BI CACGAG 1 cut(s) 3722
Bst2UI CCWGG 6 cut(s) 120, 456, 552, 2709, 3045, 3141
Bst4CI ACNGT 9 cut(s) 90, 274, 494, 697, 2679, 2863, 3083, 3340, 3791
Bst6I CTCTTC 9 cut(s) 434, 950, 1436, 1692, 1844, 3023, 4025, 4281, 4433
BstACI GRCGYC 4 cut(s) 584, 1286, 3173, 3875
BstAUI TGTACA 2 cut(s) 2341, 4930
BstBAI YACGTR 2 cut(s) 2078, 4667
BstBI TTCGAA 2 cut(s) 779, 3422
BstC8I GCNNGC 9 cut(s) 35, 1324, 1431, 2321, 2624, 3913, 4020, 4910, 5095
BstDSI CCRYGG 6 cut(s) 605, 2103, 2370, 3248, 4692, 4959
BstENI CCTNNNNNAGG 1 cut(s) 888
BstF5I GGATG 5 cut(s) 679, 1987, 3322, 4375, 4576
BstFNI CGCG 2 cut(s) 205, 2794
BstH2I RGCGCY 2 cut(s) 587, 3176
BstHHI GCGC 4 cut(s) 97, 586, 2686, 3175
BstNI CCWGG 6 cut(s) 120, 456, 552, 2709, 3045, 3141
BstNSI RCATGY 2 cut(s) 2323, 4912
BstSCI CCNGG 6 cut(s) 118, 454, 550, 2707, 3043, 3139
BstSFI CTRYAG 6 cut(s) 378, 1535, 2137, 2967, 4124, 4726
BstSLI GKGCMC 4 cut(s) 513, 695, 3102, 3338
BstUI CGCG 2 cut(s) 205, 2794
BstX2I RGATCY 5 cut(s) 1258, 1303, 1954, 3847, 4543
BstYI RGATCY 5 cut(s) 1258, 1303, 1954, 3847, 4543
BsuI GTATCC 2 cut(s) 1819, 4408
BsuRI GGCC 7 cut(s) 123, 224, 2365, 2712, 2813, 4206, 4954
BtgI CCRYGG 6 cut(s) 605, 2103, 2370, 3248, 4692, 4959
BtsCI GGATG 5 cut(s) 679, 1987, 3322, 4375, 4576
BtsIMutI CAGTG 4 cut(s) 702, 1588, 3345, 4177
Cac8I GCNNGC 9 cut(s) 35, 1324, 1431, 2321, 2624, 3913, 4020, 4910, 5095
CaiI CAGNNNCTG 3 cut(s) 377, 2193, 2966
CciI TCATGA 1 cut(s) 1132
CfoI GCGC 4 cut(s) 97, 586, 2686, 3175
CseI GACGC 2 cut(s) 1275, 3864
Csp6I GTAC 6 cut(s) 632, 965, 2342, 3275, 3554, 4931
CviQI GTAC 6 cut(s) 632, 965, 2342, 3275, 3554, 4931
DinI GGCGCC 2 cut(s) 585, 3174
DriI GACNNNNNGTC 2 cut(s) 496, 3085
EaeI YGGCCR 4 cut(s) 121, 222, 2710, 2811
Eam1104I CTCTTC 9 cut(s) 434, 950, 1436, 1692, 1844, 3023, 4025, 4281, 4433
Eam1105I GACNNNNNGTC 2 cut(s) 496, 3085
EarI CTCTTC 9 cut(s) 434, 950, 1436, 1692, 1844, 3023, 4025, 4281, 4433
EciI GGCGGA 1 cut(s) 4979
Ecl136II GAGCTC 2 cut(s) 522, 3111
Eco130I CCWWGG 6 cut(s) 605, 2103, 2370, 3248, 4692, 4959
Eco24I GRGCYC 2 cut(s) 524, 3113
Eco31I GGTCTC 1 cut(s) 1502
Eco53kI GAGCTC 2 cut(s) 522, 3111
Eco57I CTGAAG 8 cut(s) 81, 130, 314, 1179, 2670, 2719, 2903, 3501
Eco72I CACGTG 2 cut(s) 2078, 4667
Eco88I CYCGRG 1 cut(s) 4187
EcoICRI GAGCTC 2 cut(s) 522, 3111
EcoNI CCTNNNNNAGG 1 cut(s) 888
EcoRII CCWGG 6 cut(s) 118, 454, 550, 2707, 3043, 3139
EcoT14I CCWWGG 6 cut(s) 605, 2103, 2370, 3248, 4692, 4959
EcoT22I ATGCAT 8 cut(s) 1222, 2233, 2321, 2325, 3811, 4822, 4910, 4914
EcoT38I GRGCYC 2 cut(s) 524, 3113
EgeI GGCGCC 2 cut(s) 585, 3174
EheI GGCGCC 2 cut(s) 585, 3174
ErhI CCWWGG 6 cut(s) 605, 2103, 2370, 3248, 4692, 4959
Esp3I CGTCTC 1 cut(s) 3072
FalI AAGNNNNNCTT 4 cut(s) 497, 529, 3086, 3118
FaqI GGGAC 2 cut(s) 114, 2703
FbaI TGATCA 6 cut(s) 67, 415, 802, 2656, 3004, 3445
FblI GTMKAC 6 cut(s) 329, 1293, 2136, 2918, 3882, 4725
FokI GGATG 5 cut(s) 686, 1994, 3329, 4382, 4583
FriOI GRGCYC 2 cut(s) 524, 3113
GlaI GCGC 4 cut(s) 96, 585, 2685, 3174
GsuI CTGGAG 5 cut(s) 735, 2076, 3256, 3378, 4665
HaeII RGCGCY 2 cut(s) 587, 3176
HaeIII GGCC 7 cut(s) 123, 224, 2365, 2712, 2813, 4206, 4954
HgaI GACGC 2 cut(s) 1275, 3864
HhaI GCGC 4 cut(s) 97, 586, 2686, 3175
Hin1I GRCGYC 4 cut(s) 584, 1286, 3173, 3875
Hin6I GCGC 4 cut(s) 95, 584, 2684, 3173
HinP1I GCGC 4 cut(s) 95, 584, 2684, 3173
HincII GTYRAC 2 cut(s) 1294, 3883
HindII GTYRAC 2 cut(s) 1294, 3883
HindIII AAGCTT 6 cut(s) 296, 870, 1819, 2885, 3513, 4408
HphI GGTGA 9 cut(s) 470, 540, 1120, 1954, 3059, 3129, 3709, 3938, 4543
Hpy99I CGWCG 4 cut(s) 651, 1298, 3294, 3887
HpyCH4III ACNGT 9 cut(s) 90, 274, 494, 697, 2679, 2863, 3083, 3340, 3791
HpyCH4IV ACGT 4 cut(s) 1166, 2077, 3755, 4666
HpySE526I ACGT 4 cut(s) 1166, 2077, 3755, 4666
Hsp92I GRCGYC 4 cut(s) 584, 1286, 3173, 3875
HspAI GCGC 4 cut(s) 95, 584, 2684, 3173
KasI GGCGCC 2 cut(s) 583, 3172
Ksp22I TGATCA 6 cut(s) 67, 415, 802, 2656, 3004, 3445
LguI GCTCTTC 2 cut(s) 434, 3023
LmnI GCTCC 7 cut(s) 425, 842, 987, 2591, 3014, 3485, 3576
LweI GCATC 2 cut(s) 887, 3530
MaeII ACGT 4 cut(s) 1166, 2077, 3755, 4666
MaeIII GTNAC 8 cut(s) 274, 458, 830, 1788, 1967, 3047, 3473, 4377
MfeI CAATTG 1 cut(s) 1198
MflI RGATCY 5 cut(s) 1258, 1303, 1954, 3847, 4543
MhlI GDGCHC 6 cut(s) 513, 524, 695, 3102, 3113, 3338
MlsI TGGCCA 4 cut(s) 123, 224, 2712, 2813
MluNI TGGCCA 4 cut(s) 123, 224, 2712, 2813
Mly113I GGCGCC 2 cut(s) 584, 3173
MlyI GAGTC 7 cut(s) 1444, 1867, 2157, 3451, 4033, 4456, 4746
MmeI TCCRAC 6 cut(s) 1194, 2050, 2241, 3783, 4639, 4830
Mox20I TGGCCA 4 cut(s) 123, 224, 2712, 2813
Mph1103I ATGCAT 8 cut(s) 1222, 2233, 2321, 2325, 3811, 4822, 4910, 4914
MscI TGGCCA 4 cut(s) 123, 224, 2712, 2813
MslI CAYNNNNRTG 1 cut(s) 5102
Msp20I TGGCCA 4 cut(s) 123, 224, 2712, 2813
MspR9I CCNGG 6 cut(s) 120, 456, 552, 2709, 3045, 3141
MunI CAATTG 1 cut(s) 1198
MvaI CCWGG 6 cut(s) 120, 456, 552, 2709, 3045, 3141
MvnI CGCG 2 cut(s) 205, 2794
NarI GGCGCC 2 cut(s) 584, 3173
NcoI CCATGG 6 cut(s) 605, 2103, 2370, 3248, 4692, 4959
NheI GCTAGC 1 cut(s) 5093
NlaIV GGNNCC 4 cut(s) 585, 905, 2587, 3174
NmuCI GTSAC 4 cut(s) 458, 830, 3047, 3473
NsiI ATGCAT 8 cut(s) 1222, 2233, 2321, 2325, 3811, 4822, 4910, 4914
NspI RCATGY 2 cut(s) 2323, 4912
NspV TTCGAA 2 cut(s) 779, 3422
PaeI GCATGC 2 cut(s) 2323, 4912
PagI TCATGA 1 cut(s) 1132
PciSI GCTCTTC 2 cut(s) 434, 3023
PleI GAGTC 7 cut(s) 1444, 1867, 2156, 3451, 4033, 4456, 4745
PluTI GGCGCC 2 cut(s) 587, 3176
PmaCI CACGTG 2 cut(s) 2078, 4667
PmlI CACGTG 2 cut(s) 2078, 4667
PpsI GAGTC 7 cut(s) 1444, 1867, 2156, 3451, 4033, 4456, 4745
Ppu21I YACGTR 2 cut(s) 2078, 4667
PsiI TTATAA 2 cut(s) 1626, 4215
Psp124BI GAGCTC 2 cut(s) 524, 3113
Psp6I CCWGG 6 cut(s) 118, 454, 550, 2707, 3043, 3139
PspCI CACGTG 2 cut(s) 2078, 4667
PspGI CCWGG 6 cut(s) 118, 454, 550, 2707, 3043, 3139
PspN4I GGNNCC 4 cut(s) 585, 905, 2587, 3174
PstI CTGCAG 2 cut(s) 382, 2971
PstNI CAGNNNCTG 3 cut(s) 377, 2193, 2966
PsuI RGATCY 5 cut(s) 1258, 1303, 1954, 3847, 4543
RsaI GTAC 6 cut(s) 633, 966, 2343, 3276, 3555, 4932
RsaNI GTAC 6 cut(s) 632, 965, 2342, 3275, 3554, 4931
RseI CAYNNNNRTG 1 cut(s) 5102
SacI GAGCTC 2 cut(s) 524, 3113
SalI GTCGAC 2 cut(s) 1292, 3881
SapI GCTCTTC 2 cut(s) 434, 3023
SchI GAGTC 7 cut(s) 1444, 1867, 2157, 3451, 4033, 4456, 4746
ScrFI CCNGG 6 cut(s) 120, 456, 552, 2709, 3045, 3141
SduI GDGCHC 6 cut(s) 513, 524, 695, 3102, 3113, 3338
SfaNI GCATC 2 cut(s) 887, 3530
SfcI CTRYAG 6 cut(s) 378, 1535, 2137, 2967, 4124, 4726
SfoI GGCGCC 2 cut(s) 585, 3174
SfuI TTCGAA 2 cut(s) 779, 3422
SmiMI CAYNNNNRTG 1 cut(s) 5102
SmlI CTYRAG 2 cut(s) 517, 3106
SmoI CTYRAG 2 cut(s) 517, 3106
SpeI ACTAGT 3 cut(s) 365, 1333, 2954
SphI GCATGC 2 cut(s) 2323, 4912
SsiI CCGC 4 cut(s) 203, 940, 2792, 4964
SspDI GGCGCC 2 cut(s) 583, 3172
SspI AATATT 4 cut(s) 337, 1885, 2926, 4474
SstI GAGCTC 2 cut(s) 524, 3113
StyD4I CCNGG 6 cut(s) 118, 454, 550, 2707, 3043, 3139
StyI CCWWGG 6 cut(s) 605, 2103, 2370, 3248, 4692, 4959
TaaI ACNGT 9 cut(s) 90, 274, 494, 697, 2679, 2863, 3083, 3340, 3791
TaiI ACGT 4 cut(s) 1169, 2080, 3758, 4669
TatI WGTACW 2 cut(s) 2341, 4930
TscAI CASTG 4 cut(s) 702, 1588, 3345, 4177
TseFI GTSAC 4 cut(s) 458, 830, 3047, 3473
Tsp45I GTSAC 4 cut(s) 458, 830, 3047, 3473
TspGWI ACGGA 4 cut(s) 1311, 2318, 3900, 4907
TspRI CASTG 4 cut(s) 702, 1588, 3345, 4177
XagI CCTNNNNNAGG 1 cut(s) 888
XceI RCATGY 2 cut(s) 2323, 4912
XmiI GTMKAC 6 cut(s) 329, 1293, 2136, 2918, 3882, 4725
Zsp2I ATGCAT 8 cut(s) 1222, 2233, 2321, 2325, 3811, 4822, 4910, 4914
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.