MD05G1331700.v1.1

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0000033
Physical Location & Seq
Forward (+)
45556229 .. 45559729
3501 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1331700.v1.1.491

Sequence Viewer

Length: 2508 bp
ATGGGTTTTTGTAATTTAGTATTCCTCTCCAGCTTCCTCCTTCTGTCACAGATTTCTTGTGCTGCAGAAGTTTATAGCATAACTTCTCTGCAACCATTAGCACAGGGACAAACTCTCGTCTCCCCCAGCCGCATTTTCGAATTGGGATTCTTCAGTCCTAACAGTTCTGGTAATAAGTACGTCGGAATATGGCACAAGAGTATACTTCCGCGGAAAGTTGTATGGGTGGCCAACCGAGACAACCCTCTTGCAGTTACAGACGCATTGGCTAGCTTGACAATCACCAGCAACGGGAATCTGCAGCTCGTAGATGAGAAGCGGAATGAAGTTTGGTCAACGAACATTTCGGTTTCATCGAATGGTTCTCCATCTGCACTTCTTTTAGACAGCGGAAACTTTGTCATCGAACTCAAAAAAGGAGATGAGTACTTGTGGAAGAGCTTCGATTATCCTGGCGACACTCTTCTACCGGGTATGCTGCTGGGATTCAATAGTAAATCTGGAAAGCGGAGTTTCTCGACTTCTTGGAAAAGTGAGAATGATCCATCAACCGGGAAATTCTTGGTTGGATTGACACCGCAGAACCCGGCACAGGTTTTCATTTGGATTAATGGATCAACTCCTTATTGGAGAAGCGGTCCATGGGATAAAGCAATGTTCATCGGCATACCGGATATGGATGATCAATATCTAAGTGGATTTCATCTGGATGCTGATTTGCGGCAGGGAACAAAGTATTTCTGGTACAATTTATTCGGCAAGACTCTAGCATATCTGTACATCTCCTCAGAAGGGAAACATAAGTATATGTATTCAAAATATGGAGAAAACTGGAATCTTCACTGGGAGACCCCAAAATTTCCATGTGACATCTATGGAACATGTGGACCTTTTGGGGTATGCGAAGCTTCGAAATCTTCAACAACTCCAATCTGCAAGTGTTTGAAAGGGTTTGCGCCTAAGTCAGTAGATGAATGGAACAGGGGAAACAGGACAAGCGGTTGTGTGAGGCAAACCGAATTGTTTTGTGAGAGTAACACAAATCAGTCAGTCTCTTTGAGCAAAAAAGAAGATGGGTTTTGGAAGATGTCAAGTGTAAAACTACCAGATTATCATGAATATTCGTCTTTGGATGACGAAGACTGCAGGATACTTTGCCGAGATAATTGTTCGTGCCTGGCTTATGCTTACGTTAACGCTATAGGGTGTTTGGTCTGGTTCAAAGACCTTATTGATATTTCAGAGTTTTCCTCTGGTGGAGCAGATCTTTATATTCGCTTAGCAAACGCAGAACTCGGTGAAGAACAAACGCATATAAAGTTAATTGTCAGCCTCGCATTGATTTGTTTTATCATCATGGCTGCCATTGTGTTCGGTTTGTACAAGTTGCGAGCCAACCAAAAGGGAACCATCAAAGTGACGAGAAGTGAGATTACATTGACTGATACAATTGATTCATCAAGGGAAAGTCTTCAGGAATATATTCGAACGCATGATCCATCAGAGCTATTAATCTATGAATATGATTTCGATAGCATATTAACTGCTACTAGCAATTTCAGCATCACAAACAAGCTCGGAGAAGGAGGATTTGGAGCAGTTTATAGGGGTAAGCTAGAAGAAGGGAAGGAAATAGCAGTAAAAAGACTATCCAGCAGCTCGGGGCAAGGGATAGAAGAGTTCAAGAATGAGATGCTGTTGATCTCCAAACTCCAACACAAGAACCTCGTAAGGTTGATGGGCTGCTGCATCAAAGACGATGAGAAGTTAATAATTTATGAGTTCATGCAAAACAAAAGCCTGGATACTCTTCTATTCGATCCAATGAGAAGAGGAGTGCTTGATTGGGCAAAACGCTTCAATATTATTCAAGGTGTAGCCAGAGGACTTCTTTACCTCCACCATGATTCCTGCTTGAAGGTAATACATAGAGATTTGAAGGCAAGTAATATACTCTTGGATGAGAACATGAACCCAAAAATTTCGGATTTTGGACTGGCACGTATCTTTCAAGGAACACAGAACTTAGCAAACACTCAGAAGGTTGTGGGAACTCTTGGCTATATGTCTCCAGAATATGCCATGCGCGGTATATTTTCTGAAAAATCTGACGTTTATAGCTTCGGGGTCTTGGTATTGGAGATTATTGGCGGCTGTAAGAATACCAGCTTCTATGACCATGAAACAGAGCTATGCTTCCTACCTTATATATGGCACAACTGGAGTGAAGGCAAGGGATTGTACTTAGTAGACGAAGTATTGGCGGATTCATATTCCGCATCAGAAGCAACGAGATCCTTGCATGTTGGGCTTCTTTGTGTACAAGACAATGCTGCAGATAGGCCAACCATGCCGGAAGTGGTTTTCATGCTAAGTAGTGAGACACATCGTCCACAACCTAAGCGGCCTATATTCACTTTCCAAAACTCAGTTTCTGATCGTAGGCCGCGGTATGACAATACTTGCTCCGCCAATGAAGCCACCATAACGCTTCTTGAAGGACGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

836

Amino Acids

93.91

Weight (kDa)

5.93

Isoelectric Point (pI)

38.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 73 - 177 5.8e-32 D-mannose binding lectin
S_locus_glycop PF00954 210 - 322 4.5e-27 S-locus glycoprotein domain
PAN_2 PF08276 355 - 413 5.7e-16 PAN-like domain
Pkinase PF00069 521 - 787 9.2e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 522 - 738 1.8e-48 Protein tyrosine and serine/threonine kinase
DUF3403 PF11883 793 - 835 3.1e-06 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 202, 2250
AccII CGCG 3 cut(s) 211, 2088, 2449
AclWI GGATC 5 cut(s) 536, 622, 1490, 1814, 2289
AcoI YGGCCR 1 cut(s) 228
AcsI RAATTY 3 cut(s) 557, 857, 1980
AcuI CTGAAG 2 cut(s) 136, 1457
AfaI GTAC 7 cut(s) 179, 428, 746, 779, 1382, 2243, 2322
AfiI CCNNNNNNNGG 4 cut(s) 291, 551, 592, 792
AflIII ACRYGT 1 cut(s) 881
AhdI GACNNNNNGTC 1 cut(s) 2388
AjnI CCWGG 3 cut(s) 451, 1176, 1800
AjuI GAANNNNNNNTTGG 2 cut(s) 1575, 1607
AloI GAACNNNNNNTCC 2 cut(s) 1480, 1512
Alw26I GTCTC 6 cut(s) 124, 231, 842, 1057, 2073, 2375
AlwI GGATC 5 cut(s) 536, 622, 1490, 1814, 2289
AlwNI CAGNNNCTG 1 cut(s) 2435
Ama87I CYCGRG 1 cut(s) 1660
AoxI GGCC 4 cut(s) 228, 2342, 2405, 2444
ApeKI GCWGC 8 cut(s) 62, 301, 478, 1361, 1656, 1743, 1746, 2333
ApoI RAATTY 3 cut(s) 557, 857, 1980
AseI ATTAAT 2 cut(s) 609, 1511
Asp700I GAANNNNTTC 3 cut(s) 440, 1470, 1482
AspLEI GCGC 2 cut(s) 958, 2088
AspS9I GGNCC 2 cut(s) 638, 887
AsuC2I CCSGG 3 cut(s) 471, 553, 587
AsuHPI GGTGA 2 cut(s) 274, 1310
AsuII TTCGAA 3 cut(s) 138, 911, 1486
AsuNHI GCTAGC 1 cut(s) 269
AvaI CYCGRG 1 cut(s) 1660
AvaII GGWCC 2 cut(s) 638, 887
BalI TGGCCA 1 cut(s) 230
BarI GAAGNNNNNNTAC 2 cut(s) 1417, 1449
BbsI GAAGAC 2 cut(s) 1146, 1463
BbvI GCAGC 8 cut(s) 49, 313, 465, 1348, 1668, 1730, 1733, 2320
BccI CCATC 6 cut(s) 376, 553, 1067, 1418, 1507, 1732
BcgI CGANNNNNNTGC 2 cut(s) 2281, 2315
BciT130I CCWGG 3 cut(s) 453, 1178, 1802
BciVI GTATCC 2 cut(s) 1143, 1798
BclI TGATCA 1 cut(s) 682
BcnI CCSGG 3 cut(s) 471, 553, 587
BcoDI GTCTC 6 cut(s) 124, 231, 842, 1057, 2073, 2375
BfaI CTAG 4 cut(s) 270, 767, 1551, 1616
BfmI CTRYAG 5 cut(s) 63, 299, 1144, 1200, 2334
BfuI GTATCC 2 cut(s) 1143, 1798
BglII AGATCT 1 cut(s) 1264
BlpI GCTNAGC 1 cut(s) 1279
BmcAI AGTACT 1 cut(s) 428
Bme1390I CCNGG 6 cut(s) 453, 471, 553, 587, 1178, 1802
Bme18I GGWCC 2 cut(s) 638, 887
BmeRI GACNNNNNGTC 1 cut(s) 2388
BmeT110I CYCGRG 1 cut(s) 1660
BmgT120I GGNCC 2 cut(s) 638, 887
BmiI GGNNCC 1 cut(s) 1408
BmrFI CCNGG 6 cut(s) 453, 471, 553, 587, 1178, 1802
BmrI ACTGGG 1 cut(s) 853
BmsI GCATC 5 cut(s) 700, 1572, 1683, 1758, 2288
BmtI GCTAGC 1 cut(s) 273
BmuI ACTGGG 1 cut(s) 853
BpiI GAAGAC 2 cut(s) 1146, 1463
BplI GAGNNNNNCTC 2 cut(s) 1235, 1267
BpmI CTGGAG 3 cut(s) 13, 2055, 2242
Bpu10I CCTNAGC 1 cut(s) 2400
Bpu1102I GCTNAGC 1 cut(s) 1279
Bpu14I TTCGAA 3 cut(s) 138, 911, 1486
BpuMI CCSGG 3 cut(s) 471, 553, 587
BsaAI YACGTR 1 cut(s) 2003
BsaBI GATNNNNATC 1 cut(s) 687
BsaI GGTCTC 1 cut(s) 842
BsaJI CCNNGG 3 cut(s) 209, 641, 2447
BsaWI WCCGGW 1 cut(s) 670
BsaXI ACNNNNNCTCC 2 cut(s) 622, 652
Bsc4I CCNNNNNNNGG 4 cut(s) 291, 551, 592, 792
Bse1I ACTGG 4 cut(s) 836, 848, 2001, 2225
Bse3DI GCAATG 1 cut(s) 660
Bse8I GATNNNNATC 1 cut(s) 687
BseBI CCWGG 3 cut(s) 453, 1178, 1802
BseDI CCNNGG 3 cut(s) 209, 641, 2447
BseGI GGATG 4 cut(s) 685, 715, 1138, 1966
BseJI GATNNNNATC 1 cut(s) 687
BseLI CCNNNNNNNGG 4 cut(s) 291, 551, 592, 792
BseMI GCAATG 1 cut(s) 660
BseMII CTCAG 3 cut(s) 801, 2051, 2442
BseNI ACTGG 4 cut(s) 836, 848, 2001, 2225
BseRI GAGGAG 2 cut(s) 775, 1848
BseXI GCAGC 8 cut(s) 49, 313, 465, 1348, 1668, 1730, 1733, 2320
BseYI CCCAGC 2 cut(s) 125, 481
BsgI GTGCAG 1 cut(s) 357
Bsh1236I CGCG 3 cut(s) 211, 2088, 2449
BshFI GGCC 4 cut(s) 230, 2344, 2407, 2446
BsiHKCI CYCGRG 1 cut(s) 1660
BsiSI CCGG 5 cut(s) 470, 552, 587, 671, 2354
BslFI GGGAC 1 cut(s) 120
BslI CCNNNNNNNGG 4 cut(s) 291, 551, 592, 792
BsmAI GTCTC 6 cut(s) 124, 231, 842, 1057, 2073, 2375
BsmBI CGTCTC 1 cut(s) 124
BsmFI GGGAC 1 cut(s) 120
BsnI GGCC 4 cut(s) 230, 2344, 2407, 2446
Bso31I GGTCTC 1 cut(s) 842
BsoBI CYCGRG 1 cut(s) 1660
Bsp119I TTCGAA 3 cut(s) 138, 911, 1486
Bsp1407I TGTACA 3 cut(s) 777, 1380, 2320
Bsp143I GATC 9 cut(s) 541, 614, 682, 1264, 1495, 1701, 1819, 2294, 2437
Bsp1720I GCTNAGC 1 cut(s) 1279
Bsp19I CCATGG 1 cut(s) 641
BspANI GGCC 4 cut(s) 230, 2344, 2407, 2446
BspCNI CTCAG 3 cut(s) 800, 2050, 2441
BspFNI CGCG 3 cut(s) 211, 2088, 2449
BspHI TCATGA 1 cut(s) 1114
BspLI GGNNCC 1 cut(s) 1408
BspMAI CTGCAG 4 cut(s) 67, 303, 1148, 2338
BspOI GCTAGC 1 cut(s) 273
BspPI GGATC 5 cut(s) 536, 622, 1490, 1814, 2289
BspQI GCTCTTC 1 cut(s) 431
BspT104I TTCGAA 3 cut(s) 138, 911, 1486
BspTNI GGTCTC 1 cut(s) 842
BsrDI GCAATG 1 cut(s) 660
BsrGI TGTACA 3 cut(s) 777, 1380, 2320
BsrI ACTGG 4 cut(s) 836, 848, 2001, 2225
BssECI CCNNGG 3 cut(s) 209, 641, 2447
BssMI GATC 9 cut(s) 541, 614, 682, 1264, 1495, 1701, 1819, 2294, 2437
BssNAI GTATAC 1 cut(s) 203
BssT1I CCWWGG 1 cut(s) 641
Bst1107I GTATAC 1 cut(s) 203
Bst2UI CCWGG 3 cut(s) 453, 1178, 1802
Bst4CI ACNGT 1 cut(s) 164
Bst6I CTCTTC 5 cut(s) 431, 468, 1671, 1815, 1825
BstAUI TGTACA 3 cut(s) 777, 1380, 2320
BstBAI YACGTR 1 cut(s) 2003
BstBI TTCGAA 3 cut(s) 138, 911, 1486
BstC8I GCNNGC 2 cut(s) 271, 1392
BstDSI CCRYGG 3 cut(s) 209, 641, 2447
BstF5I GGATG 4 cut(s) 685, 715, 1138, 1966
BstFNI CGCG 3 cut(s) 211, 2088, 2449
BstHHI GCGC 2 cut(s) 958, 2088
BstKTI GATC 9 cut(s) 544, 617, 685, 1267, 1498, 1704, 1822, 2297, 2440
BstMAI GTCTC 6 cut(s) 124, 231, 842, 1057, 2073, 2375
BstMBI GATC 9 cut(s) 541, 614, 682, 1264, 1495, 1701, 1819, 2294, 2437
BstMWI GCNNNNNNNGC 5 cut(s) 1560, 2285, 2308, 2350, 2477
BstNI CCWGG 3 cut(s) 453, 1178, 1802
BstNSI RCATGY 2 cut(s) 885, 2306
BstSCI CCNGG 6 cut(s) 451, 469, 551, 585, 1176, 1800
BstSFI CTRYAG 5 cut(s) 63, 299, 1144, 1200, 2334
BstUI CGCG 3 cut(s) 211, 2088, 2449
BstV1I GCAGC 8 cut(s) 49, 313, 465, 1348, 1668, 1730, 1733, 2320
BstV2I GAAGAC 2 cut(s) 1146, 1463
BstX2I RGATCY 2 cut(s) 1264, 2294
BstYI RGATCY 2 cut(s) 1264, 2294
BstZ17I GTATAC 1 cut(s) 203
BsuI GTATCC 2 cut(s) 1143, 1798
BsuRI GGCC 4 cut(s) 230, 2344, 2407, 2446
BtgI CCRYGG 3 cut(s) 209, 641, 2447
BtsCI GGATG 4 cut(s) 685, 715, 1138, 1966
BtsIMutI CAGTG 1 cut(s) 841
Cac8I GCNNGC 2 cut(s) 271, 1392
CaiI CAGNNNCTG 1 cut(s) 2435
CciI TCATGA 1 cut(s) 1114
CfoI GCGC 2 cut(s) 958, 2088
Cfr13I GGNCC 2 cut(s) 638, 887
Cfr42I CCGCGG 2 cut(s) 212, 2450
CseI GACGC 1 cut(s) 269
Csp6I GTAC 7 cut(s) 178, 427, 745, 778, 1381, 2242, 2321
CviQI GTAC 7 cut(s) 178, 427, 745, 778, 1381, 2242, 2321
DpnI GATC 9 cut(s) 543, 616, 684, 1266, 1497, 1703, 1821, 2296, 2439
DpnII GATC 9 cut(s) 541, 614, 682, 1264, 1495, 1701, 1819, 2294, 2437
DriI GACNNNNNGTC 1 cut(s) 2388
EaeI YGGCCR 1 cut(s) 228
Eam1104I CTCTTC 5 cut(s) 431, 468, 1671, 1815, 1825
Eam1105I GACNNNNNGTC 1 cut(s) 2388
EarI CTCTTC 5 cut(s) 431, 468, 1671, 1815, 1825
EciI GGCGGA 2 cut(s) 2279, 2458
Eco130I CCWWGG 1 cut(s) 641
Eco31I GGTCTC 1 cut(s) 842
Eco47I GGWCC 2 cut(s) 638, 887
Eco57I CTGAAG 2 cut(s) 136, 1457
Eco88I CYCGRG 1 cut(s) 1660
EcoRII CCWGG 3 cut(s) 451, 1176, 1800
EcoT14I CCWWGG 1 cut(s) 641
ErhI CCWWGG 1 cut(s) 641
Esp3I CGTCTC 1 cut(s) 124
FaqI GGGAC 1 cut(s) 120
FbaI TGATCA 1 cut(s) 682
FblI GTMKAC 2 cut(s) 202, 2250
FokI GGATG 4 cut(s) 692, 722, 1145, 1973
FspBI CTAG 4 cut(s) 270, 767, 1551, 1616
GlaI GCGC 2 cut(s) 957, 2087
GsaI CCCAGC 2 cut(s) 129, 485
GsuI CTGGAG 3 cut(s) 13, 2055, 2242
HaeIII GGCC 4 cut(s) 230, 2344, 2407, 2446
HapII CCGG 5 cut(s) 470, 552, 587, 671, 2354
HgaI GACGC 1 cut(s) 269
HhaI GCGC 2 cut(s) 958, 2088
Hin6I GCGC 2 cut(s) 956, 2086
HinP1I GCGC 2 cut(s) 956, 2086
HincII GTYRAC 2 cut(s) 336, 1195
HindII GTYRAC 2 cut(s) 336, 1195
HindIII AAGCTT 1 cut(s) 906
HinfI GANTC 8 cut(s) 147, 295, 486, 763, 835, 1454, 1907, 2267
HpaI GTTAAC 1 cut(s) 1195
HpaII CCGG 5 cut(s) 470, 552, 587, 671, 2354
HphI GGTGA 2 cut(s) 274, 1310
Hpy166II GTNNAC 7 cut(s) 203, 336, 887, 1195, 2251, 2321, 2393
Hpy188III TCNNGA 8 cut(s) 501, 517, 707, 1115, 1475, 1684, 2072, 2495
Hpy8I GTNNAC 7 cut(s) 203, 336, 887, 1195, 2251, 2321, 2393
Hpy99I CGWCG 1 cut(s) 185
HpyCH4III ACNGT 1 cut(s) 164
HpyCH4IV ACGT 4 cut(s) 180, 1191, 2002, 2112
HpyF10VI GCNNNNNNNGC 5 cut(s) 1560, 2285, 2308, 2350, 2477
HpySE526I ACGT 4 cut(s) 180, 1191, 2002, 2112
HspAI GCGC 2 cut(s) 956, 2086
Ksp22I TGATCA 1 cut(s) 682
KspAI GTTAAC 1 cut(s) 1195
KspI CCGCGG 2 cut(s) 212, 2450
Kzo9I GATC 9 cut(s) 541, 614, 682, 1264, 1495, 1701, 1819, 2294, 2437
LguI GCTCTTC 1 cut(s) 431
LmnI GCTCC 3 cut(s) 1259, 1595, 2471
Lsp1109I GCAGC 8 cut(s) 49, 313, 465, 1348, 1668, 1730, 1733, 2320
LweI GCATC 5 cut(s) 700, 1572, 1683, 1758, 2288
MaeI CTAG 4 cut(s) 270, 767, 1551, 1616
MaeII ACGT 4 cut(s) 180, 1191, 2002, 2112
MaeIII GTNAC 5 cut(s) 45, 253, 866, 1034, 1417
MalI GATC 9 cut(s) 543, 616, 684, 1266, 1497, 1703, 1821, 2296, 2439
MboI GATC 9 cut(s) 541, 614, 682, 1264, 1495, 1701, 1819, 2294, 2437
MfeI CAATTG 1 cut(s) 1449
MflI RGATCY 2 cut(s) 1264, 2294
MlsI TGGCCA 1 cut(s) 230
MluNI TGGCCA 1 cut(s) 230
MlyI GAGTC 1 cut(s) 757
MmeI TCCRAC 3 cut(s) 163, 547, 1738
Mox20I TGGCCA 1 cut(s) 230
MroXI GAANNNNTTC 3 cut(s) 440, 1470, 1482
MscI TGGCCA 1 cut(s) 230
MseI TTAA 6 cut(s) 609, 1194, 1322, 1511, 1541, 1769
MslI CAYNNNNRTG 2 cut(s) 708, 1415
Msp20I TGGCCA 1 cut(s) 230
MspA1I CMGCKG 3 cut(s) 211, 390, 2449
MspI CCGG 5 cut(s) 470, 552, 587, 671, 2354
MspR9I CCNGG 6 cut(s) 453, 471, 553, 587, 1178, 1802
MunI CAATTG 1 cut(s) 1449
MvaI CCWGG 3 cut(s) 453, 1178, 1802
MvnI CGCG 3 cut(s) 211, 2088, 2449
MwoI GCNNNNNNNGC 5 cut(s) 1560, 2285, 2308, 2350, 2477
NciI CCSGG 3 cut(s) 471, 553, 587
NcoI CCATGG 1 cut(s) 641
NdeII GATC 9 cut(s) 541, 614, 682, 1264, 1495, 1701, 1819, 2294, 2437
NheI GCTAGC 1 cut(s) 269
NlaIV GGNNCC 1 cut(s) 1408
NmeAIII GCCGAG 1 cut(s) 1184
NmuCI GTSAC 3 cut(s) 45, 866, 1417
NspI RCATGY 2 cut(s) 885, 2306
NspV TTCGAA 3 cut(s) 138, 911, 1486
PagI TCATGA 1 cut(s) 1114
PciI ACATGT 1 cut(s) 881
PciSI GCTCTTC 1 cut(s) 431
PcsI WCGNNNNNNNCGW 1 cut(s) 353
PdmI GAANNNNTTC 3 cut(s) 440, 1470, 1482
PfeI GAWTC 7 cut(s) 147, 295, 486, 835, 1454, 1907, 2267
PleI GAGTC 1 cut(s) 757
PpsI GAGTC 1 cut(s) 757
Ppu21I YACGTR 1 cut(s) 2003
PscI ACATGT 1 cut(s) 881
PshBI ATTAAT 2 cut(s) 609, 1511
Psp6I CCWGG 3 cut(s) 451, 1176, 1800
PspFI CCCAGC 2 cut(s) 125, 481
PspGI CCWGG 3 cut(s) 451, 1176, 1800
PspN4I GGNNCC 1 cut(s) 1408
PspPI GGNCC 2 cut(s) 638, 887
PstI CTGCAG 4 cut(s) 67, 303, 1148, 2338
PstNI CAGNNNCTG 1 cut(s) 2435
PsuI RGATCY 2 cut(s) 1264, 2294
RsaI GTAC 7 cut(s) 179, 428, 746, 779, 1382, 2243, 2322
RsaNI GTAC 7 cut(s) 178, 427, 745, 778, 1381, 2242, 2321
RseI CAYNNNNRTG 2 cut(s) 708, 1415
SacII CCGCGG 2 cut(s) 212, 2450
SapI GCTCTTC 1 cut(s) 431
SaqAI TTAA 6 cut(s) 609, 1194, 1322, 1511, 1541, 1769
Sau3AI GATC 9 cut(s) 541, 614, 682, 1264, 1495, 1701, 1819, 2294, 2437
Sau96I GGNCC 2 cut(s) 638, 887
ScaI AGTACT 1 cut(s) 428
SchI GAGTC 1 cut(s) 757
ScrFI CCNGG 6 cut(s) 453, 471, 553, 587, 1178, 1802
SfaNI GCATC 5 cut(s) 700, 1572, 1683, 1758, 2288
SfcI CTRYAG 5 cut(s) 63, 299, 1144, 1200, 2334
Sfr303I CCGCGG 2 cut(s) 212, 2450
SfuI TTCGAA 3 cut(s) 138, 911, 1486
SgrBI CCGCGG 2 cut(s) 212, 2450
SinI GGWCC 2 cut(s) 638, 887
SmiMI CAYNNNNRTG 2 cut(s) 708, 1415
SspI AATATT 2 cut(s) 1121, 1864
SspMI CTAG 4 cut(s) 270, 767, 1551, 1616
StyD4I CCNGG 6 cut(s) 451, 469, 551, 585, 1176, 1800
StyI CCWWGG 1 cut(s) 641
TaaI ACNGT 1 cut(s) 164
TaiI ACGT 4 cut(s) 183, 1194, 2005, 2115
TaqI TCGA 9 cut(s) 138, 356, 405, 444, 518, 911, 1486, 1530, 1818
TatI WGTACW 5 cut(s) 426, 777, 1380, 2241, 2320
TauI GCSGC 5 cut(s) 132, 724, 2154, 2407, 2449
TfiI GAWTC 7 cut(s) 147, 295, 486, 835, 1454, 1907, 2267
Tru1I TTAA 6 cut(s) 609, 1194, 1322, 1511, 1541, 1769
Tru9I TTAA 6 cut(s) 609, 1194, 1322, 1511, 1541, 1769
TscAI CASTG 1 cut(s) 848
TseFI GTSAC 3 cut(s) 45, 866, 1417
TseI GCWGC 8 cut(s) 62, 301, 478, 1361, 1656, 1743, 1746, 2333
Tsp45I GTSAC 3 cut(s) 45, 866, 1417
TspRI CASTG 1 cut(s) 848
VpaK11BI GGWCC 2 cut(s) 638, 887
VspI ATTAAT 2 cut(s) 609, 1511
XapI RAATTY 3 cut(s) 557, 857, 1980
XceI RCATGY 2 cut(s) 885, 2306
XcmI CCANNNNNNNNNTGG 1 cut(s) 2356
XmiI GTMKAC 2 cut(s) 202, 2250
XmnI GAANNNNTTC 3 cut(s) 440, 1470, 1482
XspI CTAG 4 cut(s) 270, 767, 1551, 1616
ZrmI AGTACT 1 cut(s) 428
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.