Prupe.4G032500_v2.0.a1

PAN-like domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
1509097 .. 1513481
4385 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G032500.1

Sequence Viewer

Length: 2523 bp
ATGGATATTGGAAAAGAAGGTTTTAGTGCTTTAAATTTCTCCATCTTCATCCTGTTGCTGTTCAGCTTGCTTCCATTACAGTGTTGTTCTCAAGTTCATGACATAACTCCATCGCGACCTTTAACAGAGGGACAAACTATTGTCTCCCCAGGCAACATATTCGAGTTGGGATTCTTCAGTCCTAATAATTCTGCTGCTAATAAATATGTGGGGATATGGTACCAGAATATACTTCCTCGTAAAGTTGTATGGGTAGCCAACAGAGAAAAGCCTCTTGCAGTTGCAGACACCGTGGCTAGTTTGAGAATTAGCAGCAATGGGACTCTGGAACTTGTAGATGGGAAGCAGAATTCTGTTTGGTCAAATAATGTTTCAGTGCCATCTAATAGTTCTGCAGCTGCCCTTCTTTTAGACGATGGAAACTTTGTTGTCAAAGTCAATGCAGGAGCAGCTGATCATTTGTGGGAGAGCTTTGATTATCCTAGCGACACACTTCTACCTAGTATGCTTCTGGGATTTGATAGTAAATCCGGAAAGAGGAATTTCTTGAGTGCCTGGAAAAGTGAGAGTGATCCATCAACTGGGATATTCTTCGCTGGATTGACATTAGAGGTGCCTTCACAGTTGGTGGTTTGGATCAATGGATCAACTCTCAACTGGAGAAGCGGGCCATGGGATAAATCAAAGTTCATTGGCGTACCCGAAATGGATGATCAATATCGAAGCGGATTTTATCTAGATGAAAATGCGCAACTGGGAACAAAGTATTTCTCTTTTAGTTTATTTGAAAAAACTGTGGCAGCATATATGGACATCTCTTCAGAGGGTGTACTAAAGCTTGTCTATTCGAAACATGGCGAGAACTGGAATACTTTCTGGGAAGCCCCAAAGAGTCCATGTGACAATTATGGAGCATGTGGACCTTTTGGGGCTTGCAAAGCTTCTGAATCTCCAATCTGCAAGTGTTTGAAAGGGTTTGTTCCCAAGTCACTTGAGGAATGGAGCAAAGGAAACAGGACAGGAGGTTGTGTGAGGAAAACCAAATTGTTTTGTGAGAGTAACACAAATCAGTCAGTTGCTTCGAGAGGAAATGACGATGGGTTTTGGAAGATGTCAAGTGTAAAACAACCGGATTTTCATGAGTATATTTCGTCTTTGAGTGCTGAAAGCTGCAGGAGACAGTGTCTAGATAATTGTTCTTGCTTGGCCTATACATATGTTAATAATATAGGGTGTTTGGTCTGGTCCAAAGACATTATTGATGTTGAGGAGTTTTCATCTGCTGGACAAGATCTTTTTATTCGCCTACGCACAGAATCTGGTGAAGGAAAGCGAACAAGGATAATTGTTAGCCTCACAGTAGCTATTTGTTTTATGGCTGTCTTGGTTGCCATAGTGTTCATTTTGCACAGGTTGCGAGCGAAACAAACGGGAAACATCATAGTAACAAGAAAGTTCATTGATACCATTGGGAATTCAAGTGCCACTCTTCAAGAATATATCAGACAGCATGATCGGTCAGAGTTACTCATCTATAATTTTGATAACATATTGCTTGCTACAAACAATTTCAGTATCACAAACAAACTCGGGGAAGGAGGATTTGGCCCTGTTTACAAGGGTAAACTGCAAGAAGGGAAGGAAATAGCAGTAAAAAGACTATCTAGTAGCTCAGGGCAAGGCATAGAAGAGTTCAAGAATGAGATGCTGTTGATCTCCAAACTGCAACATAAAAATCTTGTTAGGATCATGGGCTGCTCTGTCCAGGATGATGAGAAGTTACTAATTTACGAGTTCATGCCAAATGGAAGCTTGGATACTCTTCTATTCAATTCAATGACAGGAGGAGCAGTGCTTGATTGGGGTCGACGCTTCAAGATTATTCTGGGTGTTGCTAGAGGGCTTCTTTATCTCCACCATGATTCCTGTTTGAAGGTAATACATAGAGATTTGAAGGTCAGTAACATTCTCTTGGATGAGAACATGAACCCAAAAATTTCAGATTTTGGATTGGCACGTATCGTTCAAGGCACGCAGAGTCTAGCAAATACTCACAAGGTTGTGGGAACAATTGGCTATATGTCTCCGGAGTATGCCATGGGCGGGATGTTTTCTGAAAAATCTGATGTCTATAGCTTCGGGGTGTTGCTATTGGAGATTATTAGTGGCAAAAAGAATACCAGCTTCTATTGCAGTGACCAACAGCTAGGGTTCCTAGCTTATACATGGCACTCATGGAATGCAGGCAGGGGATTGGAGTTGGTTGATGAAGTATTGGCAAATTCATATTCACCGTCAGAAGTGATGAGATGTGTGCATATTGGTCTTCTTTGTGTACAGGACAATGCAGTAGATAGGCCAACCATGCCAGATGTAGTTTCCATGCTAAGTACTGAGACAGATCGTCCACAGCCTCACCGGCCTATATTTACTGTCCAAAAGTCAGTCTCTGATCCTCAACCACAGTATGACAATATCTACTCTGGAAATGAAGCTACCATAACAGTGATTCAAGGACGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

841

Amino Acids

93.23

Weight (kDa)

6.21

Isoelectric Point (pI)

42.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 750
Acc65I GGTACC 1 cut(s) 219
AccB1I GGYRCC 2 cut(s) 219, 613
AccB7I CCANNNNNTGG 1 cut(s) 581
AccI GTMKAC 1 cut(s) 1867
AccII CGCG 1 cut(s) 115
AccIII TCCGGA 2 cut(s) 530, 2086
AciI CCGC 3 cut(s) 666, 726, 2103
AclWI GGATC 5 cut(s) 566, 644, 652, 1754, 2447
AcsI RAATTY 6 cut(s) 34, 349, 541, 1474, 1995, 2281
AcuI CTGAAG 2 cut(s) 160, 804
AfaI GTAC 5 cut(s) 221, 699, 831, 2337, 2392
AfiI CCNNNNNNNGG 3 cut(s) 537, 581, 2103
AhdI GACNNNNNGTC 1 cut(s) 2403
AjnI CCWGG 3 cut(s) 148, 554, 1764
AjuI GAANNNNNNNTTGG 2 cut(s) 1587, 1619
Alw26I GTCTC 5 cut(s) 148, 1171, 2088, 2390, 2452
AlwI GGATC 5 cut(s) 566, 644, 652, 1754, 2447
AlwNI CAGNNNCTG 2 cut(s) 1319, 2450
Ama87I CYCGRG 1 cut(s) 1589
Aor13HI TCCGGA 2 cut(s) 530, 2086
AoxI GGCC 5 cut(s) 668, 1206, 1606, 2357, 2420
ApeKI GCWGC 8 cut(s) 194, 312, 395, 398, 449, 800, 1170, 1755
ApoI RAATTY 6 cut(s) 34, 349, 541, 1474, 1995, 2281
Asp700I GAANNNNTTC 1 cut(s) 872
Asp718I GGTACC 1 cut(s) 219
AspLEI GCGC 1 cut(s) 751
AspS9I GGNCC 4 cut(s) 668, 920, 1245, 1607
AsuHPI GGTGA 3 cut(s) 1334, 2283, 2408
AsuII TTCGAA 1 cut(s) 848
AvaI CYCGRG 1 cut(s) 1589
AvaII GGWCC 2 cut(s) 920, 1245
BanI GGYRCC 2 cut(s) 219, 613
BarI GAAGNNNNNNTAC 2 cut(s) 1801, 1833
BbsI GAAGAC 1 cut(s) 2318
BbvI GCAGC 8 cut(s) 181, 324, 385, 407, 461, 812, 1157, 1742
BccI CCATC 7 cut(s) 50, 118, 332, 388, 410, 583, 1091
BcgI CGANNNNNNTGC 2 cut(s) 142, 176
BciT130I CCWGG 3 cut(s) 150, 556, 1766
BciVI GTATCC 1 cut(s) 1810
BclI TGATCA 2 cut(s) 454, 712
BcoDI GTCTC 5 cut(s) 148, 1171, 2088, 2390, 2452
BfmI CTRYAG 3 cut(s) 393, 1171, 2131
BfuI GTATCC 1 cut(s) 1810
BglI GCCNNNNNGGC 1 cut(s) 2419
BglII AGATCT 1 cut(s) 1291
BisI GCNGC 8 cut(s) 195, 313, 396, 399, 450, 801, 1171, 1756
BlsI GCNGC 8 cut(s) 196, 314, 397, 400, 451, 802, 1172, 1757
BmcAI AGTACT 1 cut(s) 2392
Bme1390I CCNGG 3 cut(s) 150, 556, 1766
Bme18I GGWCC 2 cut(s) 920, 1245
BmeRI GACNNNNNGTC 1 cut(s) 2403
BmeT110I CYCGRG 1 cut(s) 1589
BmgT120I GGNCC 4 cut(s) 668, 920, 1245, 1607
BmiI GGNNCC 3 cut(s) 221, 615, 2213
BmrFI CCNGG 3 cut(s) 150, 556, 1766
BmrI ACTGGG 2 cut(s) 591, 764
BmsI GCATC 1 cut(s) 1695
BmuI ACTGGG 2 cut(s) 591, 764
BpiI GAAGAC 1 cut(s) 2318
BpmI CTGGAG 1 cut(s) 679
Bpu10I CCTNAGC 1 cut(s) 1672
Bpu14I TTCGAA 1 cut(s) 848
BpuEI CTTGAG 3 cut(s) 75, 568, 1013
BsaAI YACGTR 1 cut(s) 2018
BsaBI GATNNNNATC 1 cut(s) 717
BsaJI CCNNGG 4 cut(s) 148, 291, 671, 2097
BsaWI WCCGGW 3 cut(s) 530, 1129, 2086
BsaXI ACNNNNNCTCC 6 cut(s) 1014, 1044, 1168, 1198, 1836, 1866
Bsc4I CCNNNNNNNGG 3 cut(s) 537, 581, 2103
Bse118I RCCGGY 1 cut(s) 2418
Bse1I ACTGG 4 cut(s) 586, 662, 759, 869
Bse3DI GCAATG 1 cut(s) 322
Bse8I GATNNNNATC 1 cut(s) 717
BseAI TCCGGA 2 cut(s) 530, 2086
BseBI CCWGG 3 cut(s) 150, 556, 1766
BseDI CCNNGG 4 cut(s) 148, 291, 671, 2097
BseGI GGATG 5 cut(s) 48, 715, 1774, 1981, 2112
BseJI GATNNNNATC 1 cut(s) 717
BseLI CCNNNNNNNGG 3 cut(s) 537, 581, 2103
BseMI GCAATG 1 cut(s) 322
BseMII CTCAG 2 cut(s) 1686, 2385
BseNI ACTGG 4 cut(s) 586, 662, 759, 869
BseRI GAGGAG 2 cut(s) 1283, 1860
BseXI GCAGC 8 cut(s) 181, 324, 385, 407, 461, 812, 1157, 1742
Bsh1236I CGCG 1 cut(s) 115
BshFI GGCC 5 cut(s) 670, 1208, 1608, 2359, 2422
BshNI GGYRCC 2 cut(s) 219, 613
BsiHKCI CYCGRG 1 cut(s) 1589
BsiSI CCGG 4 cut(s) 531, 1130, 2087, 2419
BslFI GGGAC 2 cut(s) 144, 334
BslI CCNNNNNNNGG 3 cut(s) 537, 581, 2103
BsmAI GTCTC 5 cut(s) 148, 1171, 2088, 2390, 2452
BsmFI GGGAC 2 cut(s) 144, 334
BsmI GAATGC 1 cut(s) 2245
BsnI GGCC 5 cut(s) 670, 1208, 1608, 2359, 2422
BsoBI CYCGRG 1 cut(s) 1589
Bsp119I TTCGAA 1 cut(s) 848
Bsp13I TCCGGA 2 cut(s) 530, 2086
Bsp1407I TGTACA 1 cut(s) 2335
Bsp19I CCATGG 2 cut(s) 671, 2097
Bsp68I TCGCGA 1 cut(s) 115
BspACI CCGC 3 cut(s) 666, 726, 2103
BspANI GGCC 5 cut(s) 670, 1208, 1608, 2359, 2422
BspCNI CTCAG 2 cut(s) 1685, 2386
BspEI TCCGGA 2 cut(s) 530, 2086
BspFNI CGCG 1 cut(s) 115
BspHI TCATGA 2 cut(s) 97, 1138
BspLI GGNNCC 3 cut(s) 221, 615, 2213
BspMAI CTGCAG 2 cut(s) 397, 1175
BspPI GGATC 5 cut(s) 566, 644, 652, 1754, 2447
BspT104I TTCGAA 1 cut(s) 848
BspT107I GGYRCC 2 cut(s) 219, 613
BsrDI GCAATG 1 cut(s) 322
BsrFI RCCGGY 1 cut(s) 2418
BsrGI TGTACA 1 cut(s) 2335
BsrI ACTGG 4 cut(s) 586, 662, 759, 869
BssAI RCCGGY 1 cut(s) 2418
BssECI CCNNGG 4 cut(s) 148, 291, 671, 2097
BssT1I CCWWGG 2 cut(s) 671, 2097
Bst2UI CCWGG 3 cut(s) 150, 556, 1766
Bst6I CTCTTC 4 cut(s) 823, 1494, 1683, 1827
BstAPI GCANNNNNTGC 1 cut(s) 1414
BstAUI TGTACA 1 cut(s) 2335
BstBAI YACGTR 1 cut(s) 2018
BstBI TTCGAA 1 cut(s) 848
BstC8I GCNNGC 7 cut(s) 68, 668, 934, 1419, 1557, 2033, 2245
BstDEI CTNAG 3 cut(s) 1672, 2387, 2394
BstDSI CCRYGG 3 cut(s) 291, 671, 2097
BstF5I GGATG 5 cut(s) 48, 715, 1774, 1981, 2112
BstFNI CGCG 1 cut(s) 115
BstHHI GCGC 1 cut(s) 751
BstMAI GTCTC 5 cut(s) 148, 1171, 2088, 2390, 2452
BstMWI GCNNNNNNNGC 6 cut(s) 449, 938, 1414, 2190, 2365, 2419
BstNI CCWGG 3 cut(s) 150, 556, 1766
BstNSI RCATGY 1 cut(s) 918
BstSCI CCNGG 3 cut(s) 148, 554, 1764
BstSFI CTRYAG 3 cut(s) 393, 1171, 2131
BstUI CGCG 1 cut(s) 115
BstV1I GCAGC 8 cut(s) 181, 324, 385, 407, 461, 812, 1157, 1742
BstV2I GAAGAC 1 cut(s) 2318
BstX2I RGATCY 1 cut(s) 1291
BstYI RGATCY 1 cut(s) 1291
BsuI GTATCC 1 cut(s) 1810
BsuRI GGCC 5 cut(s) 670, 1208, 1608, 2359, 2422
BtgI CCRYGG 3 cut(s) 291, 671, 2097
BtgZI GCGATG 1 cut(s) 96
BtsCI GGATG 5 cut(s) 48, 715, 1774, 1981, 2112
BtsI GCAGTG 2 cut(s) 1857, 2200
BtsIMutI CAGTG 6 cut(s) 86, 381, 1187, 1857, 2200, 2511
BtuMI TCGCGA 1 cut(s) 115
Cac8I GCNNGC 7 cut(s) 68, 668, 934, 1419, 1557, 2033, 2245
CaiI CAGNNNCTG 2 cut(s) 1319, 2450
CciI TCATGA 2 cut(s) 97, 1138
CfoI GCGC 1 cut(s) 751
Cfr10I RCCGGY 1 cut(s) 2418
Cfr13I GGNCC 4 cut(s) 668, 920, 1245, 1607
CseI GACGC 1 cut(s) 1878
Csp6I GTAC 5 cut(s) 220, 698, 830, 2336, 2391
CviQI GTAC 5 cut(s) 220, 698, 830, 2336, 2391
DdeI CTNAG 3 cut(s) 1672, 2387, 2394
DraI TTTAAA 1 cut(s) 33
DriI GACNNNNNGTC 1 cut(s) 2403
Eam1104I CTCTTC 4 cut(s) 823, 1494, 1683, 1827
Eam1105I GACNNNNNGTC 1 cut(s) 2403
EarI CTCTTC 4 cut(s) 823, 1494, 1683, 1827
Eco130I CCWWGG 2 cut(s) 671, 2097
Eco47I GGWCC 2 cut(s) 920, 1245
Eco57I CTGAAG 2 cut(s) 160, 804
Eco88I CYCGRG 1 cut(s) 1589
EcoRI GAATTC 2 cut(s) 349, 1474
EcoRII CCWGG 3 cut(s) 148, 554, 1764
EcoT14I CCWWGG 2 cut(s) 671, 2097
ErhI CCWWGG 2 cut(s) 671, 2097
FaqI GGGAC 2 cut(s) 144, 334
FauI CCCGC 2 cut(s) 659, 2096
FauNDI CATATG 1 cut(s) 1216
FbaI TGATCA 2 cut(s) 454, 712
FblI GTMKAC 1 cut(s) 1867
Fnu4HI GCNGC 8 cut(s) 195, 313, 396, 399, 450, 801, 1171, 1756
FokI GGATG 5 cut(s) 35, 722, 1781, 1988, 2119
Fsp4HI GCNGC 8 cut(s) 195, 313, 396, 399, 450, 801, 1171, 1756
FspI TGCGCA 1 cut(s) 750
GlaI GCGC 1 cut(s) 750
GluI GCNGC 8 cut(s) 195, 313, 396, 399, 450, 801, 1171, 1756
GsuI CTGGAG 1 cut(s) 679
HaeIII GGCC 5 cut(s) 670, 1208, 1608, 2359, 2422
HapII CCGG 4 cut(s) 531, 1130, 2087, 2419
HgaI GACGC 1 cut(s) 1878
HhaI GCGC 1 cut(s) 751
Hin6I GCGC 1 cut(s) 749
HinP1I GCGC 1 cut(s) 749
HincII GTYRAC 1 cut(s) 1868
HindII GTYRAC 1 cut(s) 1868
HindIII AAGCTT 3 cut(s) 836, 939, 1810
HinfI GANTC 8 cut(s) 171, 322, 892, 947, 1316, 1922, 2038, 2509
HpaII CCGG 4 cut(s) 531, 1130, 2087, 2419
HphI GGTGA 3 cut(s) 1334, 2283, 2408
Hpy166II GTNNAC 7 cut(s) 830, 920, 1615, 1625, 1868, 2336, 2408
Hpy188I TCNGA 9 cut(s) 823, 946, 1505, 1522, 2002, 2116, 2125, 2299, 2452
Hpy8I GTNNAC 7 cut(s) 830, 920, 1615, 1625, 1868, 2336, 2408
Hpy99I CGWCG 1 cut(s) 1872
HpyAV CCTTC 9 cut(s) 11, 413, 627, 1319, 1589, 1628, 1633, 1927, 1948
HpyCH4IV ACGT 1 cut(s) 2017
HpyF10VI GCNNNNNNNGC 6 cut(s) 449, 938, 1414, 2190, 2365, 2419
HpyF3I CTNAG 3 cut(s) 1672, 2387, 2394
HpySE526I ACGT 1 cut(s) 2017
HspAI GCGC 1 cut(s) 749
Kpn2I TCCGGA 2 cut(s) 530, 2086
KpnI GGTACC 1 cut(s) 223
Ksp22I TGATCA 2 cut(s) 454, 712
LmnI GCTCC 4 cut(s) 446, 911, 1002, 1847
Lsp1109I GCAGC 8 cut(s) 181, 324, 385, 407, 461, 812, 1157, 1742
LweI GCATC 1 cut(s) 1695
MaeII ACGT 1 cut(s) 2017
MaeIII GTNAC 8 cut(s) 899, 987, 1058, 1444, 1524, 1779, 1961, 2195
MboII GAAGA 9 cut(s) 37, 166, 583, 810, 1120, 1481, 1700, 1814, 2318
MfeI CAATTG 1 cut(s) 2070
MflI RGATCY 1 cut(s) 1291
MlyI GAGTC 3 cut(s) 316, 901, 2047
MroI TCCGGA 2 cut(s) 530, 2086
MroXI GAANNNNTTC 1 cut(s) 872
MseI TTAA 3 cut(s) 32, 122, 1221
MslI CAYNNNNRTG 2 cut(s) 79, 2504
MspA1I CMGCKG 2 cut(s) 398, 452
MspI CCGG 4 cut(s) 531, 1130, 2087, 2419
MspR9I CCNGG 3 cut(s) 150, 556, 1766
MunI CAATTG 1 cut(s) 2070
Mva1269I GAATGC 1 cut(s) 2245
MvaI CCWGG 3 cut(s) 150, 556, 1766
MvnI CGCG 1 cut(s) 115
MwoI GCNNNNNNNGC 6 cut(s) 449, 938, 1414, 2190, 2365, 2419
NcoI CCATGG 2 cut(s) 671, 2097
NdeI CATATG 1 cut(s) 1216
NlaIV GGNNCC 3 cut(s) 221, 615, 2213
NmuCI GTSAC 3 cut(s) 899, 987, 2195
NruI TCGCGA 1 cut(s) 115
NsbI TGCGCA 1 cut(s) 750
NspI RCATGY 1 cut(s) 918
NspV TTCGAA 1 cut(s) 848
PagI TCATGA 2 cut(s) 97, 1138
PctI GAATGC 1 cut(s) 2245
PdmI GAANNNNTTC 1 cut(s) 872
PfeI GAWTC 5 cut(s) 171, 947, 1316, 1922, 2509
PflFI GACNNNGTC 1 cut(s) 1182
PflMI CCANNNNNTGG 1 cut(s) 581
PfoI TCCNGGA 1 cut(s) 1764
PkrI GCNGC 8 cut(s) 196, 314, 397, 400, 451, 802, 1172, 1757
PleI GAGTC 3 cut(s) 316, 900, 2046
PpsI GAGTC 3 cut(s) 316, 900, 2046
Ppu21I YACGTR 1 cut(s) 2018
Psp6I CCWGG 3 cut(s) 148, 554, 1764
PspGI CCWGG 3 cut(s) 148, 554, 1764
PspN4I GGNNCC 3 cut(s) 221, 615, 2213
PspPI GGNCC 4 cut(s) 668, 920, 1245, 1607
PstI CTGCAG 2 cut(s) 397, 1175
PstNI CAGNNNCTG 2 cut(s) 1319, 2450
PsuI RGATCY 1 cut(s) 1291
PsyI GACNNNGTC 1 cut(s) 1182
PvuII CAGCTG 2 cut(s) 398, 452
RruI TCGCGA 1 cut(s) 115
RsaI GTAC 5 cut(s) 221, 699, 831, 2337, 2392
RsaNI GTAC 5 cut(s) 220, 698, 830, 2336, 2391
RseI CAYNNNNRTG 2 cut(s) 79, 2504
SalI GTCGAC 1 cut(s) 1866
SaqAI TTAA 3 cut(s) 32, 122, 1221
SatI GCNGC 8 cut(s) 195, 313, 396, 399, 450, 801, 1171, 1756
Sau96I GGNCC 4 cut(s) 668, 920, 1245, 1607
ScaI AGTACT 1 cut(s) 2392
SchI GAGTC 3 cut(s) 316, 901, 2047
ScrFI CCNGG 3 cut(s) 150, 556, 1766
SfaNI GCATC 1 cut(s) 1695
SfcI CTRYAG 3 cut(s) 393, 1171, 2131
SfuI TTCGAA 1 cut(s) 848
SinI GGWCC 2 cut(s) 920, 1245
SmiMI CAYNNNNRTG 2 cut(s) 79, 2504
SmlI CTYRAG 3 cut(s) 90, 547, 992
SmoI CTYRAG 3 cut(s) 90, 547, 992
SsiI CCGC 3 cut(s) 666, 726, 2103
StyD4I CCNGG 3 cut(s) 148, 554, 1764
StyI CCWWGG 2 cut(s) 671, 2097
TaiI ACGT 1 cut(s) 2020
TaqI TCGA 5 cut(s) 162, 721, 848, 1082, 1867
TaqII GACCGA 1 cut(s) 1506
TatI WGTACW 3 cut(s) 829, 2335, 2390
TfiI GAWTC 5 cut(s) 171, 947, 1316, 1922, 2509
Tru1I TTAA 3 cut(s) 32, 122, 1221
Tru9I TTAA 3 cut(s) 32, 122, 1221
TscAI CASTG 6 cut(s) 86, 381, 1187, 1857, 2200, 2511
TseFI GTSAC 3 cut(s) 899, 987, 2195
TseI GCWGC 8 cut(s) 194, 312, 395, 398, 449, 800, 1170, 1755
Tsp45I GTSAC 3 cut(s) 899, 987, 2195
TspRI CASTG 6 cut(s) 86, 381, 1187, 1857, 2200, 2511
Tth111I GACNNNGTC 1 cut(s) 1182
Van91I CCANNNNNTGG 1 cut(s) 581
VpaK11BI GGWCC 2 cut(s) 920, 1245
XapI RAATTY 6 cut(s) 34, 349, 541, 1474, 1995, 2281
XbaI TCTAGA 2 cut(s) 736, 1186
XceI RCATGY 1 cut(s) 918
XmiI GTMKAC 1 cut(s) 1867
XmnI GAANNNNTTC 1 cut(s) 872
ZrmI AGTACT 1 cut(s) 2392
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.