PAN-like domain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 75 |
| AccI | GTMKAC | 2 cut(s) | 202, 2256 |
| AccII | CGCG | 3 cut(s) | 211, 263, 2455 |
| AclWI | GGATC | 4 cut(s) | 536, 622, 1496, 1820 |
| AcoI | YGGCCR | 3 cut(s) | 127, 228, 1884 |
| AcsI | RAATTY | 3 cut(s) | 557, 857, 1986 |
| AcuI | CTGAAG | 3 cut(s) | 136, 771, 1463 |
| AfaI | GTAC | 7 cut(s) | 428, 746, 779, 798, 1388, 1845, 2328 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 291, 551, 592, 1257 |
| AflIII | ACRYGT | 3 cut(s) | 261, 881, 2118 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2394 |
| AjiI | CACGTC | 1 cut(s) | 2119 |
| AjnI | CCWGG | 2 cut(s) | 451, 1176 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1581, 1613 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1486, 1518 |
| Alw26I | GTCTC | 5 cut(s) | 124, 231, 755, 2079, 2381 |
| AlwI | GGATC | 4 cut(s) | 536, 622, 1496, 1820 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2441 |
| Ama87I | CYCGRG | 1 cut(s) | 1666 |
| AoxI | GGCC | 6 cut(s) | 127, 228, 849, 1884, 2348, 2450 |
| ApeKI | GCWGC | 9 cut(s) | 62, 301, 371, 1367, 1662, 1749, 1752, 2339, 2410 |
| ApoI | RAATTY | 3 cut(s) | 557, 857, 1986 |
| AseI | ATTAAT | 2 cut(s) | 609, 1517 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 440, 1476, 1488, 1862 |
| AspLEI | GCGC | 1 cut(s) | 958 |
| AspS9I | GGNCC | 4 cut(s) | 638, 850, 887, 1264 |
| AsuC2I | CCSGG | 4 cut(s) | 126, 471, 553, 587 |
| AsuHPI | GGTGA | 1 cut(s) | 274 |
| AsuII | TTCGAA | 3 cut(s) | 138, 911, 1492 |
| AsuNHI | GCTAGC | 1 cut(s) | 269 |
| AvaI | CYCGRG | 1 cut(s) | 1666 |
| AvaII | GGWCC | 3 cut(s) | 638, 887, 1264 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 788, 821 |
| BalI | TGGCCA | 2 cut(s) | 230, 1886 |
| BbsI | GAAGAC | 1 cut(s) | 1469 |
| BbvI | GCAGC | 9 cut(s) | 49, 313, 358, 1354, 1649, 1736, 1739, 2326, 2422 |
| BccI | CCATC | 6 cut(s) | 553, 1067, 1424, 1513, 1738, 1914 |
| BciT130I | CCWGG | 2 cut(s) | 453, 1178 |
| BciVI | GTATCC | 2 cut(s) | 1143, 1804 |
| BclI | TGATCA | 1 cut(s) | 682 |
| BcnI | CCSGG | 4 cut(s) | 126, 471, 553, 587 |
| BcoDI | GTCTC | 5 cut(s) | 124, 231, 755, 2079, 2381 |
| BfaI | CTAG | 4 cut(s) | 270, 767, 1557, 1622 |
| BfmI | CTRYAG | 4 cut(s) | 299, 1144, 1200, 2340 |
| BfuI | GTATCC | 2 cut(s) | 1143, 1804 |
| BlpI | GCTNAGC | 1 cut(s) | 1279 |
| BmcAI | AGTACT | 2 cut(s) | 428, 1845 |
| Bme1390I | CCNGG | 6 cut(s) | 126, 453, 471, 553, 587, 1178 |
| Bme18I | GGWCC | 3 cut(s) | 638, 887, 1264 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2394 |
| BmeT110I | CYCGRG | 1 cut(s) | 1666 |
| BmgBI | CACGTC | 1 cut(s) | 2119 |
| BmgT120I | GGNCC | 4 cut(s) | 638, 850, 887, 1264 |
| BmiI | GGNNCC | 3 cut(s) | 364, 852, 1414 |
| BmrFI | CCNGG | 6 cut(s) | 126, 453, 471, 553, 587, 1178 |
| BmrI | ACTGGG | 1 cut(s) | 853 |
| BmsI | GCATC | 5 cut(s) | 1352, 1578, 1764, 2291, 2294 |
| BmtI | GCTAGC | 1 cut(s) | 273 |
| BmuI | ACTGGG | 1 cut(s) | 853 |
| BpiI | GAAGAC | 1 cut(s) | 1469 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1235, 1267 |
| BpmI | CTGGAG | 2 cut(s) | 13, 2061 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2406 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1279 |
| Bpu14I | TTCGAA | 3 cut(s) | 138, 911, 1492 |
| BpuMI | CCSGG | 4 cut(s) | 126, 471, 553, 587 |
| Bsa29I | ATCGAT | 1 cut(s) | 1346 |
| BsaAI | YACGTR | 1 cut(s) | 2009 |
| BsaBI | GATNNNNATC | 1 cut(s) | 687 |
| BsaJI | CCNNGG | 4 cut(s) | 124, 209, 641, 2453 |
| BsaWI | WCCGGW | 1 cut(s) | 670 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 622, 652 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 291, 551, 592, 1257 |
| Bse1I | ACTGG | 3 cut(s) | 836, 848, 2007 |
| Bse3DI | GCAATG | 1 cut(s) | 2301 |
| Bse8I | GATNNNNATC | 1 cut(s) | 687 |
| BseBI | CCWGG | 2 cut(s) | 453, 1178 |
| BseCI | ATCGAT | 1 cut(s) | 1346 |
| BseDI | CCNNGG | 4 cut(s) | 124, 209, 641, 2453 |
| BseGI | GGATG | 3 cut(s) | 685, 715, 1138 |
| BseJI | GATNNNNATC | 1 cut(s) | 687 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 291, 551, 592, 1257 |
| BseMI | GCAATG | 1 cut(s) | 2301 |
| BseMII | CTCAG | 2 cut(s) | 2057, 2448 |
| BseNI | ACTGG | 3 cut(s) | 836, 848, 2007 |
| BseRI | GAGGAG | 1 cut(s) | 1854 |
| BseX3I | CGGCCG | 1 cut(s) | 127 |
| BseXI | GCAGC | 9 cut(s) | 49, 313, 358, 1354, 1649, 1736, 1739, 2326, 2422 |
| BseYI | CCCAGC | 1 cut(s) | 367 |
| BsgI | GTGCAG | 1 cut(s) | 357 |
| Bsh1236I | CGCG | 3 cut(s) | 211, 263, 2455 |
| Bsh1285I | CGRYCG | 1 cut(s) | 130 |
| BshFI | GGCC | 6 cut(s) | 129, 230, 851, 1886, 2350, 2452 |
| BshVI | ATCGAT | 1 cut(s) | 1346 |
| BsiEI | CGRYCG | 1 cut(s) | 130 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1666 |
| BsiSI | CCGG | 6 cut(s) | 126, 470, 552, 587, 671, 2360 |
| BslFI | GGGAC | 2 cut(s) | 120, 2035 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 291, 551, 592, 1257 |
| BsmAI | GTCTC | 5 cut(s) | 124, 231, 755, 2079, 2381 |
| BsmBI | CGTCTC | 1 cut(s) | 124 |
| BsmFI | GGGAC | 2 cut(s) | 120, 2035 |
| BsmI | GAATGC | 1 cut(s) | 328 |
| BsnI | GGCC | 6 cut(s) | 129, 230, 851, 1886, 2350, 2452 |
| BsoBI | CYCGRG | 1 cut(s) | 1666 |
| Bsp119I | TTCGAA | 3 cut(s) | 138, 911, 1492 |
| Bsp1407I | TGTACA | 3 cut(s) | 777, 1386, 2326 |
| Bsp143I | GATC | 8 cut(s) | 541, 614, 682, 1501, 1707, 1825, 2392, 2443 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1279 |
| BspANI | GGCC | 6 cut(s) | 129, 230, 851, 1886, 2350, 2452 |
| BspCNI | CTCAG | 2 cut(s) | 2056, 2447 |
| BspDI | ATCGAT | 1 cut(s) | 1346 |
| BspFNI | CGCG | 3 cut(s) | 211, 263, 2455 |
| BspHI | TCATGA | 2 cut(s) | 1114, 1909 |
| BspLI | GGNNCC | 3 cut(s) | 364, 852, 1414 |
| BspMAI | CTGCAG | 3 cut(s) | 303, 1148, 2344 |
| BspOI | GCTAGC | 1 cut(s) | 273 |
| BspPI | GGATC | 4 cut(s) | 536, 622, 1496, 1820 |
| BspQI | GCTCTTC | 1 cut(s) | 431 |
| BspT104I | TTCGAA | 3 cut(s) | 138, 911, 1492 |
| BsrDI | GCAATG | 1 cut(s) | 2301 |
| BsrGI | TGTACA | 3 cut(s) | 777, 1386, 2326 |
| BsrI | ACTGG | 3 cut(s) | 836, 848, 2007 |
| BssECI | CCNNGG | 4 cut(s) | 124, 209, 641, 2453 |
| BssMI | GATC | 8 cut(s) | 541, 614, 682, 1501, 1707, 1825, 2392, 2443 |
| BssNAI | GTATAC | 1 cut(s) | 203 |
| Bst1107I | GTATAC | 1 cut(s) | 203 |
| Bst2UI | CCWGG | 2 cut(s) | 453, 1178 |
| Bst4CI | ACNGT | 2 cut(s) | 164, 2096 |
| Bst6I | CTCTTC | 6 cut(s) | 431, 468, 790, 1677, 1821, 1831 |
| BstAUI | TGTACA | 3 cut(s) | 777, 1386, 2326 |
| BstBAI | YACGTR | 1 cut(s) | 2009 |
| BstBI | TTCGAA | 3 cut(s) | 138, 911, 1492 |
| BstC8I | GCNNGC | 3 cut(s) | 271, 1398, 2306 |
| BstDEI | CTNAG | 8 cut(s) | 692, 960, 1279, 2032, 2043, 2378, 2406, 2434 |
| BstDSI | CCRYGG | 3 cut(s) | 209, 641, 2453 |
| BstF5I | GGATG | 3 cut(s) | 685, 715, 1138 |
| BstFNI | CGCG | 3 cut(s) | 211, 263, 2455 |
| BstHHI | GCGC | 1 cut(s) | 958 |
| BstKTI | GATC | 8 cut(s) | 544, 617, 685, 1504, 1710, 1828, 2395, 2446 |
| BstMAI | GTCTC | 5 cut(s) | 124, 231, 755, 2079, 2381 |
| BstMBI | GATC | 8 cut(s) | 541, 614, 682, 1501, 1707, 1825, 2392, 2443 |
| BstMCI | CGRYCG | 1 cut(s) | 130 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 1566, 2291, 2356, 2483 |
| BstNI | CCWGG | 2 cut(s) | 453, 1178 |
| BstNSI | RCATGY | 2 cut(s) | 885, 2312 |
| BstSCI | CCNGG | 6 cut(s) | 124, 451, 469, 551, 585, 1176 |
| BstSFI | CTRYAG | 4 cut(s) | 299, 1144, 1200, 2340 |
| BstUI | CGCG | 3 cut(s) | 211, 263, 2455 |
| BstV1I | GCAGC | 9 cut(s) | 49, 313, 358, 1354, 1649, 1736, 1739, 2326, 2422 |
| BstV2I | GAAGAC | 1 cut(s) | 1469 |
| BstZ17I | GTATAC | 1 cut(s) | 203 |
| BstZI | CGGCCG | 1 cut(s) | 127 |
| Bsu15I | ATCGAT | 1 cut(s) | 1346 |
| BsuI | GTATCC | 2 cut(s) | 1143, 1804 |
| BsuRI | GGCC | 6 cut(s) | 129, 230, 851, 1886, 2350, 2452 |
| BsuTUI | ATCGAT | 1 cut(s) | 1346 |
| BtgI | CCRYGG | 3 cut(s) | 209, 641, 2453 |
| BtgZI | GCGATG | 1 cut(s) | 668 |
| BtrI | CACGTC | 1 cut(s) | 2119 |
| BtsCI | GGATG | 3 cut(s) | 685, 715, 1138 |
| BtsIMutI | CAGTG | 1 cut(s) | 841 |
| Cac8I | GCNNGC | 3 cut(s) | 271, 1398, 2306 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2441 |
| CciI | TCATGA | 2 cut(s) | 1114, 1909 |
| CfoI | GCGC | 1 cut(s) | 958 |
| Cfr13I | GGNCC | 4 cut(s) | 638, 850, 887, 1264 |
| Cfr42I | CCGCGG | 2 cut(s) | 212, 2456 |
| ClaI | ATCGAT | 1 cut(s) | 1346 |
| CpoI | CGGWCCG | 1 cut(s) | 638 |
| CseI | GACGC | 2 cut(s) | 269, 467 |
| Csp6I | GTAC | 7 cut(s) | 427, 745, 778, 797, 1387, 1844, 2327 |
| CspI | CGGWCCG | 1 cut(s) | 638 |
| CviQI | GTAC | 7 cut(s) | 427, 745, 778, 797, 1387, 1844, 2327 |
| DdeI | CTNAG | 8 cut(s) | 692, 960, 1279, 2032, 2043, 2378, 2406, 2434 |
| DpnI | GATC | 8 cut(s) | 543, 616, 684, 1503, 1709, 1827, 2394, 2445 |
| DpnII | GATC | 8 cut(s) | 541, 614, 682, 1501, 1707, 1825, 2392, 2443 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2394 |
| EaeI | YGGCCR | 3 cut(s) | 127, 228, 1884 |
| EagI | CGGCCG | 1 cut(s) | 127 |
| Eam1104I | CTCTTC | 6 cut(s) | 431, 468, 790, 1677, 1821, 1831 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2394 |
| EarI | CTCTTC | 6 cut(s) | 431, 468, 790, 1677, 1821, 1831 |
| EciI | GGCGGA | 3 cut(s) | 1277, 2285, 2464 |
| EclXI | CGGCCG | 1 cut(s) | 127 |
| Eco47I | GGWCC | 3 cut(s) | 638, 887, 1264 |
| Eco52I | CGGCCG | 1 cut(s) | 127 |
| Eco57I | CTGAAG | 3 cut(s) | 136, 771, 1463 |
| Eco88I | CYCGRG | 1 cut(s) | 1666 |
| EcoO109I | RGGNCCY | 1 cut(s) | 850 |
| EcoRII | CCWGG | 2 cut(s) | 451, 1176 |
| Esp3I | CGTCTC | 1 cut(s) | 124 |
| FaqI | GGGAC | 2 cut(s) | 120, 2035 |
| FbaI | TGATCA | 1 cut(s) | 682 |
| FblI | GTMKAC | 2 cut(s) | 202, 2256 |
| FokI | GGATG | 3 cut(s) | 692, 722, 1145 |
| FspBI | CTAG | 4 cut(s) | 270, 767, 1557, 1622 |
| GlaI | GCGC | 1 cut(s) | 957 |
| GsaI | CCCAGC | 1 cut(s) | 371 |
| GsuI | CTGGAG | 2 cut(s) | 13, 2061 |
| HaeIII | GGCC | 6 cut(s) | 129, 230, 851, 1886, 2350, 2452 |
| HapII | CCGG | 6 cut(s) | 126, 470, 552, 587, 671, 2360 |
| HgaI | GACGC | 2 cut(s) | 269, 467 |
| HhaI | GCGC | 1 cut(s) | 958 |
| Hin6I | GCGC | 1 cut(s) | 956 |
| HinP1I | GCGC | 1 cut(s) | 956 |
| HincII | GTYRAC | 2 cut(s) | 336, 1195 |
| HindII | GTYRAC | 2 cut(s) | 336, 1195 |
| HindIII | AAGCTT | 2 cut(s) | 906, 1804 |
| HinfI | GANTC | 8 cut(s) | 147, 295, 486, 763, 835, 1460, 1913, 2273 |
| HpaI | GTTAAC | 1 cut(s) | 1195 |
| HpaII | CCGG | 6 cut(s) | 126, 470, 552, 587, 671, 2360 |
| HphI | GGTGA | 1 cut(s) | 274 |
| Hpy166II | GTNNAC | 7 cut(s) | 203, 336, 887, 1195, 2257, 2327, 2399 |
| Hpy8I | GTNNAC | 7 cut(s) | 203, 336, 887, 1195, 2257, 2327, 2399 |
| Hpy99I | CGWCG | 1 cut(s) | 665 |
| HpyCH4III | ACNGT | 2 cut(s) | 164, 2096 |
| HpyCH4IV | ACGT | 3 cut(s) | 1191, 2008, 2118 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 1566, 2291, 2356, 2483 |
| HpyF3I | CTNAG | 8 cut(s) | 692, 960, 1279, 2032, 2043, 2378, 2406, 2434 |
| HpySE526I | ACGT | 3 cut(s) | 1191, 2008, 2118 |
| HspAI | GCGC | 1 cut(s) | 956 |
| Ksp22I | TGATCA | 1 cut(s) | 682 |
| KspAI | GTTAAC | 1 cut(s) | 1195 |
| KspI | CCGCGG | 2 cut(s) | 212, 2456 |
| Kzo9I | GATC | 8 cut(s) | 541, 614, 682, 1501, 1707, 1825, 2392, 2443 |
| LguI | GCTCTTC | 1 cut(s) | 431 |
| LmnI | GCTCC | 4 cut(s) | 978, 1059, 1601, 2477 |
| Lsp1109I | GCAGC | 9 cut(s) | 49, 313, 358, 1354, 1649, 1736, 1739, 2326, 2422 |
| LweI | GCATC | 5 cut(s) | 1352, 1578, 1764, 2291, 2294 |
| MaeI | CTAG | 4 cut(s) | 270, 767, 1557, 1622 |
| MaeII | ACGT | 3 cut(s) | 1191, 2008, 2118 |
| MaeIII | GTNAC | 5 cut(s) | 45, 253, 866, 1034, 1423 |
| MalI | GATC | 8 cut(s) | 543, 616, 684, 1503, 1709, 1827, 2394, 2445 |
| MboI | GATC | 8 cut(s) | 541, 614, 682, 1501, 1707, 1825, 2392, 2443 |
| MlsI | TGGCCA | 2 cut(s) | 230, 1886 |
| MluI | ACGCGT | 1 cut(s) | 261 |
| MluNI | TGGCCA | 2 cut(s) | 230, 1886 |
| MlyI | GAGTC | 1 cut(s) | 757 |
| MmeI | TCCRAC | 4 cut(s) | 163, 1744, 2035, 2293 |
| Mox20I | TGGCCA | 2 cut(s) | 230, 1886 |
| MroXI | GAANNNNTTC | 4 cut(s) | 440, 1476, 1488, 1862 |
| MscI | TGGCCA | 2 cut(s) | 230, 1886 |
| MseI | TTAA | 8 cut(s) | 609, 714, 1194, 1328, 1517, 1547, 1775, 1875 |
| MslI | CAYNNNNRTG | 2 cut(s) | 708, 1421 |
| Msp20I | TGGCCA | 2 cut(s) | 230, 1886 |
| MspA1I | CMGCKG | 5 cut(s) | 211, 371, 390, 1662, 2455 |
| MspI | CCGG | 6 cut(s) | 126, 470, 552, 587, 671, 2360 |
| MspR9I | CCNGG | 6 cut(s) | 126, 453, 471, 553, 587, 1178 |
| Mva1269I | GAATGC | 1 cut(s) | 328 |
| MvaI | CCWGG | 2 cut(s) | 453, 1178 |
| MvnI | CGCG | 3 cut(s) | 211, 263, 2455 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 1566, 2291, 2356, 2483 |
| NciI | CCSGG | 4 cut(s) | 126, 471, 553, 587 |
| NdeII | GATC | 8 cut(s) | 541, 614, 682, 1501, 1707, 1825, 2392, 2443 |
| NheI | GCTAGC | 1 cut(s) | 269 |
| NlaIV | GGNNCC | 3 cut(s) | 364, 852, 1414 |
| NmeAIII | GCCGAG | 1 cut(s) | 1184 |
| NmuCI | GTSAC | 3 cut(s) | 45, 866, 1423 |
| NspI | RCATGY | 2 cut(s) | 885, 2312 |
| NspV | TTCGAA | 3 cut(s) | 138, 911, 1492 |
| PagI | TCATGA | 2 cut(s) | 1114, 1909 |
| PciI | ACATGT | 1 cut(s) | 881 |
| PciSI | GCTCTTC | 1 cut(s) | 431 |
| PctI | GAATGC | 1 cut(s) | 328 |
| PdmI | GAANNNNTTC | 4 cut(s) | 440, 1476, 1488, 1862 |
| PfeI | GAWTC | 7 cut(s) | 147, 295, 486, 835, 1460, 1913, 2273 |
| PleI | GAGTC | 1 cut(s) | 757 |
| PpsI | GAGTC | 1 cut(s) | 757 |
| Ppu21I | YACGTR | 1 cut(s) | 2009 |
| PscI | ACATGT | 1 cut(s) | 881 |
| PshBI | ATTAAT | 2 cut(s) | 609, 1517 |
| PsiI | TTATAA | 1 cut(s) | 75 |
| Psp6I | CCWGG | 2 cut(s) | 451, 1176 |
| PspFI | CCCAGC | 1 cut(s) | 367 |
| PspGI | CCWGG | 2 cut(s) | 451, 1176 |
| PspN4I | GGNNCC | 3 cut(s) | 364, 852, 1414 |
| PspPI | GGNCC | 4 cut(s) | 638, 850, 887, 1264 |
| PstI | CTGCAG | 3 cut(s) | 303, 1148, 2344 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2441 |
| PvuII | CAGCTG | 2 cut(s) | 371, 1662 |
| RsaI | GTAC | 7 cut(s) | 428, 746, 779, 798, 1388, 1845, 2328 |
| RsaNI | GTAC | 7 cut(s) | 427, 745, 778, 797, 1387, 1844, 2327 |
| RseI | CAYNNNNRTG | 2 cut(s) | 708, 1421 |
| Rsr2I | CGGWCCG | 1 cut(s) | 638 |
| RsrII | CGGWCCG | 1 cut(s) | 638 |
| SacII | CCGCGG | 2 cut(s) | 212, 2456 |
| SapI | GCTCTTC | 1 cut(s) | 431 |
| SaqAI | TTAA | 8 cut(s) | 609, 714, 1194, 1328, 1517, 1547, 1775, 1875 |
| Sau3AI | GATC | 8 cut(s) | 541, 614, 682, 1501, 1707, 1825, 2392, 2443 |
| Sau96I | GGNCC | 4 cut(s) | 638, 850, 887, 1264 |
| ScaI | AGTACT | 2 cut(s) | 428, 1845 |
| SchI | GAGTC | 1 cut(s) | 757 |
| ScrFI | CCNGG | 6 cut(s) | 126, 453, 471, 553, 587, 1178 |
| SfaNI | GCATC | 5 cut(s) | 1352, 1578, 1764, 2291, 2294 |
| SfcI | CTRYAG | 4 cut(s) | 299, 1144, 1200, 2340 |
| Sfr303I | CCGCGG | 2 cut(s) | 212, 2456 |
| SfuI | TTCGAA | 3 cut(s) | 138, 911, 1492 |
| SgrBI | CCGCGG | 2 cut(s) | 212, 2456 |
| SinI | GGWCC | 3 cut(s) | 638, 887, 1264 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 708, 1421 |
| SspI | AATATT | 3 cut(s) | 343, 1121, 1870 |
| SspMI | CTAG | 4 cut(s) | 270, 767, 1557, 1622 |
| StyD4I | CCNGG | 6 cut(s) | 124, 451, 469, 551, 585, 1176 |
| TaaI | ACNGT | 2 cut(s) | 164, 2096 |
| TaiI | ACGT | 3 cut(s) | 1194, 2011, 2121 |
| TaqI | TCGA | 9 cut(s) | 138, 405, 444, 518, 911, 1346, 1492, 1536, 1824 |
| TaqII | GACCGA | 1 cut(s) | 1035 |
| TatI | WGTACW | 5 cut(s) | 426, 777, 1386, 1843, 2326 |
| TauI | GCSGC | 4 cut(s) | 132, 724, 2160, 2455 |
| TfiI | GAWTC | 7 cut(s) | 147, 295, 486, 835, 1460, 1913, 2273 |
| Tru1I | TTAA | 8 cut(s) | 609, 714, 1194, 1328, 1517, 1547, 1775, 1875 |
| Tru9I | TTAA | 8 cut(s) | 609, 714, 1194, 1328, 1517, 1547, 1775, 1875 |
| TscAI | CASTG | 1 cut(s) | 848 |
| TseFI | GTSAC | 3 cut(s) | 45, 866, 1423 |
| TseI | GCWGC | 9 cut(s) | 62, 301, 371, 1367, 1662, 1749, 1752, 2339, 2410 |
| Tsp45I | GTSAC | 3 cut(s) | 45, 866, 1423 |
| TspGWI | ACGGA | 2 cut(s) | 64, 630 |
| TspRI | CASTG | 1 cut(s) | 848 |
| VpaK11BI | GGWCC | 3 cut(s) | 638, 887, 1264 |
| VspI | ATTAAT | 2 cut(s) | 609, 1517 |
| XapI | RAATTY | 3 cut(s) | 557, 857, 1986 |
| XceI | RCATGY | 2 cut(s) | 885, 2312 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2362 |
| XmiI | GTMKAC | 2 cut(s) | 202, 2256 |
| XmnI | GAANNNNTTC | 4 cut(s) | 440, 1476, 1488, 1862 |
| XspI | CTAG | 4 cut(s) | 270, 767, 1557, 1622 |
| ZrmI | AGTACT | 2 cut(s) | 428, 1845 |