Rw5G004420

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
4643360 .. 4648853
5494 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G004420.1

Sequence Viewer

Length: 2445 bp
ATGCAACTGGGTAGTGTTACTTTGTTTTTCTCATTCATCTTCAGTTTGCTTCTGTCACAGTATGGCGCTGAAGTATATAAAATAACTCCTTCGCTCCCATTATCCGAGGGAGAAACTCTAGTTTCTCCTGGTCTAATATTCGAATTGGGCTTCTTCAGTCCTAATAGTTCTGGTAACAAGTATGTGGGAATATGGCACAAGGACATATTTCCAAGAAAAGTAGTATGGGTAGCTAACAGAGACAAGCCTATTGCTTTTAAAGACACCCTGGCTAGTTTGAGAGTTAGCAGCTATGGGAGTCTGGAGCTTGTGGATGGGAAGCAGAATTCTGTTTGGTCAACCAATGTTACAATACAGGTTTCACCATCTAATACTAGTTTAGTTGCTGCAGTTCTTTCAGACGATGGAAACTTTGTTGTCAAAGATGTTATCGGAGCTGGTGAATCAATATGGCAGAGTTTTCATCATCCTGGTGACACTTTGCTACCAAACATGATGTTGGGATACGATATTAAAAATGGAAAAAGCAGTTTCTTAACTGCCTGGAAAAGTGAGAGTGATCCATCTAGTGGGATATATACAATTACACTCGGACGACGAACAGATAGGCCAGCACAAATGATTGTTTGGATTAATGGATCAATTCCCTTCAGGAGAACTGGGCCATGGGATAAATCAAAATTCATCGGCATCCCAGATATGGATTATCGATATCTTAAGAAAACTCTCGCATATGTAGACCTGTCTTCACAGGGAAAGATAAAGCATATGAGGTCAGAAAATGGTAGGAATTGGTCACTCAAGTACGAGTCACAACAGAATCCATGTAACATCTATGGAGCATGTGGGGCTTATGGGGTTTGCAGCGTTTCTAGATCTCCAATCTGCAAATGTTTGAAAGGGTTTGTACCAAAGTCAGACCATGAATGGAGCAAAGGAGACTGGACCGGTGGCTGTGTAAGGAAAACCGAATTGTTCTGTGAGAGACAAACAAATAAGAAGGCAGTGCCATTGCAAGGAAAAAAAGATGATAATGATGGGTTTTGGAAGATCATACGGGCGAAAGTACCAGATTATTATCAGTATATTACATCTTTGGATCCTGAACACAACTTTAATGACTGCAAGTTACAGTGCCTAAATAATTGTTCGTGCCTGGCTTATGCACTTGTTAATAATATCGGGTGTCTAGTCTGGTACAAAGACCTCATTGATATACAGCAATTTTCCAAGGGGGGAGTTGATATTTATATTCGCCTAGCACGCAGAGAACTAGGTGAAGGAAAGCCAATTAAGTTGATTGCCTGCCTTACAGCTATTGGTTTAATTATTATCTTGGTTGCCATAGTGTTCGGTTTACACAGGTTGCGAGCTAACCAAAAGGAATCGACTCCAACTTCTAGGGACACTCTTCGAGAATATATTGGAAAACATGGTCCATCTGAGCTATTGATCTATGATTTTGGTACCATATTAACTGCTACAGACAATTTCAGCATTACAAACAAACTCGGGCAAGGAGGTTTTGGTCCTGTTTATAAGGGTATACTACAATATGGGAAGGAAATAGCTGTAAAAAGACTATCTAGTAGCTCAGGACAAGGCATTGAAGAGTTCAAGAATGAAATGTTGTTGATCTCCAATCTTCAACACAAAAATCTTGTAAGGATGATGGGTTGCTGCGTTAAAGAGGATGAGAAATTACTGGTTTATGAGTTCATGCCAAACAAAAGCTTGGATACGTTTCTATTCGATCCTATGAGGAGAGGAGAGCTTGATTGGGATAGACGCTTCAATATTATTCAGGGTATTGCTAGAGGACTTCTTTATCTCCATCATGATTCCTATGTGAAGGTAATACATAGAGATCTGAAAGTCAGCAACATTCTCTTGGATGAAAAAATGAACCCAAAAATTTCAGATTTTGGATTGGCACGAATAGTTGAAGGAACACATTGTCTAGAGAATACTCAAAAGGTTGTGGGAACACGTGGCTATATGTCTCCAGAATATGCCATGGCTGGGATATTTTCCGAAAAATCTGATGTCTACAGTTTTGGAGTTTTGGTACTGGAGATTATTAGCAGCAAGAAGAATAACAACTTCTTTTTATATGAGAAACAGCTAGGCTTTCTAGCCCATGCATGGAACTTGTGGTCTGAAGGCAAGGGATTGGAATTGGTAGATGAAGTATTGAGTGATTCATATTCCTCATCAGAAGTATTGAAATGTGTGCACATTGGACTTCTTTGTGCACAGGATAATGCTGCGGATAGACCAACCATGAAGGATATAGCTTTAATGCTAAGTAGTGAGAAAGATGGTCCACAACCCAAGAGGCCTGTATTCATCTTGCAAAACTTAGTTTCTCATCCTCAACCGCAGTATGAACATATTAATTCCTCCATGAATGAAGCTACTATTACAATGATTGAAGGACGATAA

Protein Analysis

814

Amino Acids

91.48

Weight (kDa)

8.5

Isoelectric Point (pI)

36.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 74 - 183 1.3e-28 D-mannose binding lectin
S_locus_glycop PF00954 240 - 306 2.6e-17 S-locus glycoprotein domain
PAN_2 PF08276 344 - 406 4.2e-16 PAN-like domain
Pkinase PF00069 499 - 697 2.5e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 500 - 766 2.4e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1539
Acc65I GGTACC 1 cut(s) 1466
AccB1I GGYRCC 1 cut(s) 1466
AccB7I CCANNNNNTGG 1 cut(s) 569
AccI GTMKAC 3 cut(s) 738, 1546, 2049
AciI CCGC 2 cut(s) 2270, 2381
AclWI GGATC 5 cut(s) 554, 646, 1094, 1107, 1748
AcsI RAATTY 3 cut(s) 325, 680, 1914
AcuI CTGAAG 5 cut(s) 25, 90, 139, 634, 2181
AcvI CACGTG 1 cut(s) 1991
AfaI GTAC 6 cut(s) 806, 909, 1068, 1199, 1468, 2070
AfiI CCNNNNNNNGG 5 cut(s) 569, 700, 1016, 2022, 2145
AflII CTTAAG 1 cut(s) 716
AflIII ACRYGT 1 cut(s) 1988
AgeI ACCGGT 1 cut(s) 947
AgsI TTSAA 8 cut(s) 898, 1610, 1618, 1649, 1795, 1946, 2227, 2435
AhlI ACTAGT 1 cut(s) 374
AjnI CCWGG 5 cut(s) 127, 267, 469, 542, 1155
Alw21I GWGCWC 2 cut(s) 2238, 2257
Alw26I GTCTC 4 cut(s) 234, 933, 979, 2007
Alw44I GTGCAC 2 cut(s) 2234, 2253
AlwI GGATC 5 cut(s) 554, 646, 1094, 1107, 1748
Ama87I CYCGRG 1 cut(s) 1511
AoxI GGCC 3 cut(s) 608, 662, 2339
ApaLI GTGCAC 2 cut(s) 2234, 2253
ApeKI GCWGC 6 cut(s) 288, 386, 864, 1680, 2085, 2267
ApoI RAATTY 3 cut(s) 325, 680, 1914
AseI ATTAAT 2 cut(s) 633, 2397
AsiGI ACCGGT 1 cut(s) 947
Asp718I GGTACC 1 cut(s) 1466
AspLEI GCGC 1 cut(s) 68
AspS9I GGNCC 5 cut(s) 662, 945, 1436, 1529, 2324
AsuHPI GGTGA 4 cut(s) 354, 452, 485, 1289
AsuII TTCGAA 1 cut(s) 141
AvaI CYCGRG 1 cut(s) 1511
AvaII GGWCC 4 cut(s) 945, 1436, 1529, 2324
BaeGI GKGCMC 2 cut(s) 2238, 2257
BamHI GGATCC 1 cut(s) 1099
BanI GGYRCC 1 cut(s) 1466
BbrPI CACGTG 1 cut(s) 1991
BbsI GAAGAC 1 cut(s) 738
Bbv12I GWGCWC 2 cut(s) 2238, 2257
BbvI GCAGC 6 cut(s) 300, 373, 876, 1667, 2097, 2254
BccI CCATC 9 cut(s) 308, 373, 398, 571, 1031, 1447, 1666, 1842, 2315
BciT130I CCWGG 5 cut(s) 129, 269, 471, 544, 1157
BciVI GTATCC 2 cut(s) 497, 1732
BcoDI GTCTC 4 cut(s) 234, 933, 979, 2007
BcuI ACTAGT 1 cut(s) 374
BfmI CTRYAG 3 cut(s) 387, 1482, 2050
BfoI RGCGCY 1 cut(s) 69
BfrI CTTAAG 1 cut(s) 716
BfuI GTATCC 2 cut(s) 497, 1732
BglII AGATCT 2 cut(s) 875, 1867
BisI GCNGC 6 cut(s) 289, 387, 865, 1681, 2086, 2268
BlsI GCNGC 6 cut(s) 290, 388, 866, 1682, 2087, 2269
Bme1390I CCNGG 5 cut(s) 129, 269, 471, 544, 1157
Bme18I GGWCC 4 cut(s) 945, 1436, 1529, 2324
BmeT110I CYCGRG 1 cut(s) 1511
BmgT120I GGNCC 5 cut(s) 662, 945, 1436, 1529, 2324
BmiI GGNNCC 2 cut(s) 1101, 1468
BmrFI CCNGG 5 cut(s) 129, 269, 471, 544, 1157
BmrI ACTGGG 2 cut(s) 17, 669
BmsI GCATC 1 cut(s) 699
BmuI ACTGGG 2 cut(s) 17, 669
BpiI GAAGAC 1 cut(s) 738
BpmI CTGGAG 3 cut(s) 323, 1989, 2093
Bpu10I CCTNAGC 1 cut(s) 1594
Bpu14I TTCGAA 1 cut(s) 141
BpuEI CTTGAG 1 cut(s) 785
Bsa29I ATCGAT 1 cut(s) 709
BsaAI YACGTR 1 cut(s) 1991
BsaBI GATNNNNATC 1 cut(s) 1077
BsaJI CCNNGG 5 cut(s) 105, 267, 665, 1230, 2016
BsaWI WCCGGW 1 cut(s) 947
BsaXI ACNNNNNCTCC 2 cut(s) 2052, 2082
Bsc4I CCNNNNNNNGG 5 cut(s) 569, 700, 1016, 2022, 2145
Bse118I RCCGGY 1 cut(s) 947
Bse1I ACTGG 5 cut(s) 12, 664, 947, 1710, 2076
Bse3DI GCAATG 1 cut(s) 1010
Bse8I GATNNNNATC 1 cut(s) 1077
BseBI CCWGG 5 cut(s) 129, 269, 471, 544, 1157
BseCI ATCGAT 1 cut(s) 709
BseDI CCNNGG 5 cut(s) 105, 267, 665, 1230, 2016
BseGI GGATG 7 cut(s) 319, 466, 690, 1674, 1699, 1900, 2371
BseJI GATNNNNATC 1 cut(s) 1077
BseLI CCNNNNNNNGG 5 cut(s) 569, 700, 1016, 2022, 2145
BseMI GCAATG 1 cut(s) 1010
BseMII CTCAG 2 cut(s) 1434, 1608
BseNI ACTGG 5 cut(s) 12, 664, 947, 1710, 2076
BseRI GAGGAG 2 cut(s) 1777, 1782
BseSI GKGCMC 2 cut(s) 2238, 2257
BseXI GCAGC 6 cut(s) 300, 373, 876, 1667, 2097, 2254
BseYI CCCAGC 1 cut(s) 2021
BshFI GGCC 3 cut(s) 610, 664, 2341
BshNI GGYRCC 1 cut(s) 1466
BshTI ACCGGT 1 cut(s) 947
BshVI ATCGAT 1 cut(s) 709
BsiHKAI GWGCWC 2 cut(s) 2238, 2257
BsiHKCI CYCGRG 1 cut(s) 1511
BsiSI CCGG 1 cut(s) 948
BslFI GGGAC 1 cut(s) 1418
BslI CCNNNNNNNGG 5 cut(s) 569, 700, 1016, 2022, 2145
BsmAI GTCTC 4 cut(s) 234, 933, 979, 2007
BsmFI GGGAC 1 cut(s) 1418
BsnI GGCC 3 cut(s) 610, 664, 2341
BsoBI CYCGRG 1 cut(s) 1511
Bsp119I TTCGAA 1 cut(s) 141
Bsp1286I GDGCHC 2 cut(s) 2238, 2257
Bsp143I GATC 9 cut(s) 559, 638, 875, 1050, 1099, 1452, 1635, 1753, 1867
Bsp19I CCATGG 2 cut(s) 665, 2016
BspACI CCGC 2 cut(s) 2270, 2381
BspANI GGCC 3 cut(s) 610, 664, 2341
BspCNI CTCAG 2 cut(s) 1435, 1607
BspDI ATCGAT 1 cut(s) 709
BspHI TCATGA 1 cut(s) 1837
BspLI GGNNCC 2 cut(s) 1101, 1468
BspMAI CTGCAG 1 cut(s) 391
BspPI GGATC 5 cut(s) 554, 646, 1094, 1107, 1748
BspT104I TTCGAA 1 cut(s) 141
BspT107I GGYRCC 1 cut(s) 1466
BspTI CTTAAG 1 cut(s) 716
BsrDI GCAATG 1 cut(s) 1010
BsrFI RCCGGY 1 cut(s) 947
BsrI ACTGG 5 cut(s) 12, 664, 947, 1710, 2076
BssAI RCCGGY 1 cut(s) 947
BssECI CCNNGG 5 cut(s) 105, 267, 665, 1230, 2016
BssMI GATC 9 cut(s) 559, 638, 875, 1050, 1099, 1452, 1635, 1753, 1867
BssNAI GTATAC 1 cut(s) 1547
BssT1I CCWWGG 3 cut(s) 665, 1230, 2016
Bst1107I GTATAC 1 cut(s) 1547
Bst2UI CCWGG 5 cut(s) 129, 269, 471, 544, 1157
Bst4CI ACNGT 3 cut(s) 60, 1134, 2054
Bst6I CTCTTC 2 cut(s) 1416, 1605
BstAFI CTTAAG 1 cut(s) 716
BstBAI YACGTR 1 cut(s) 1991
BstBI TTCGAA 1 cut(s) 141
BstC8I GCNNGC 4 cut(s) 612, 1264, 1306, 1371
BstDEI CTNAG 4 cut(s) 1443, 1594, 2306, 2362
BstDSI CCRYGG 2 cut(s) 665, 2016
BstF5I GGATG 7 cut(s) 319, 466, 690, 1674, 1699, 1900, 2371
BstH2I RGCGCY 1 cut(s) 69
BstHHI GCGC 1 cut(s) 68
BstKTI GATC 9 cut(s) 562, 641, 878, 1053, 1102, 1455, 1638, 1756, 1870
BstMAI GTCTC 4 cut(s) 234, 933, 979, 2007
BstMBI GATC 9 cut(s) 559, 638, 875, 1050, 1099, 1452, 1635, 1753, 1867
BstMWI GCNNNNNNNGC 2 cut(s) 848, 1263
BstNI CCWGG 5 cut(s) 129, 269, 471, 544, 1157
BstNSI RCATGY 1 cut(s) 846
BstSCI CCNGG 5 cut(s) 127, 267, 469, 542, 1155
BstSFI CTRYAG 3 cut(s) 387, 1482, 2050
BstSLI GKGCMC 2 cut(s) 2238, 2257
BstV1I GCAGC 6 cut(s) 300, 373, 876, 1667, 2097, 2254
BstV2I GAAGAC 1 cut(s) 738
BstX2I RGATCY 3 cut(s) 875, 1099, 1867
BstYI RGATCY 3 cut(s) 875, 1099, 1867
BstZ17I GTATAC 1 cut(s) 1547
Bsu15I ATCGAT 1 cut(s) 709
BsuI GTATCC 2 cut(s) 497, 1732
BsuRI GGCC 3 cut(s) 610, 664, 2341
BsuTUI ATCGAT 1 cut(s) 709
BtgI CCRYGG 2 cut(s) 665, 2016
BtsCI GGATG 7 cut(s) 319, 466, 690, 1674, 1699, 1900, 2371
BtsI GCAGTG 1 cut(s) 1011
BtsIMutI CAGTG 2 cut(s) 1011, 1139
Cac8I GCNNGC 4 cut(s) 612, 1264, 1306, 1371
CciI TCATGA 1 cut(s) 1837
CfoI GCGC 1 cut(s) 68
Cfr10I RCCGGY 1 cut(s) 947
Cfr13I GGNCC 5 cut(s) 662, 945, 1436, 1529, 2324
ClaI ATCGAT 1 cut(s) 709
CseI GACGC 1 cut(s) 1797
Csp6I GTAC 6 cut(s) 805, 908, 1067, 1198, 1467, 2069
CspAI ACCGGT 1 cut(s) 947
CviQI GTAC 6 cut(s) 805, 908, 1067, 1198, 1467, 2069
DdeI CTNAG 4 cut(s) 1443, 1594, 2306, 2362
DpnI GATC 9 cut(s) 561, 640, 877, 1052, 1101, 1454, 1637, 1755, 1869
DpnII GATC 9 cut(s) 559, 638, 875, 1050, 1099, 1452, 1635, 1753, 1867
DraI TTTAAA 1 cut(s) 259
Eam1104I CTCTTC 2 cut(s) 1416, 1605
EarI CTCTTC 2 cut(s) 1416, 1605
Eco130I CCWWGG 3 cut(s) 665, 1230, 2016
Eco147I AGGCCT 1 cut(s) 2341
Eco32I GATATC 1 cut(s) 713
Eco47I GGWCC 4 cut(s) 945, 1436, 1529, 2324
Eco57I CTGAAG 5 cut(s) 25, 90, 139, 634, 2181
Eco72I CACGTG 1 cut(s) 1991
Eco88I CYCGRG 1 cut(s) 1511
EcoRI GAATTC 1 cut(s) 325
EcoRII CCWGG 5 cut(s) 127, 267, 469, 542, 1155
EcoRV GATATC 1 cut(s) 713
EcoT14I CCWWGG 3 cut(s) 665, 1230, 2016
EcoT22I ATGCAT 1 cut(s) 2146
ErhI CCWWGG 3 cut(s) 665, 1230, 2016
FaqI GGGAC 1 cut(s) 1418
FauNDI CATATG 2 cut(s) 733, 768
FblI GTMKAC 3 cut(s) 738, 1546, 2049
Fnu4HI GCNGC 6 cut(s) 289, 387, 865, 1681, 2086, 2268
FokI GGATG 7 cut(s) 326, 453, 677, 1681, 1706, 1907, 2358
Fsp4HI GCNGC 6 cut(s) 289, 387, 865, 1681, 2086, 2268
GlaI GCGC 1 cut(s) 67
GluI GCNGC 6 cut(s) 289, 387, 865, 1681, 2086, 2268
GsaI CCCAGC 1 cut(s) 2025
GsuI CTGGAG 3 cut(s) 323, 1989, 2093
HaeII RGCGCY 1 cut(s) 69
HaeIII GGCC 3 cut(s) 610, 664, 2341
HapII CCGG 1 cut(s) 948
HgaI GACGC 1 cut(s) 1797
HhaI GCGC 1 cut(s) 68
Hin6I GCGC 1 cut(s) 66
HinP1I GCGC 1 cut(s) 66
HincII GTYRAC 1 cut(s) 339
HindII GTYRAC 1 cut(s) 339
HindIII AAGCTT 1 cut(s) 1732
HinfI GANTC 8 cut(s) 298, 443, 809, 820, 1385, 1390, 1841, 2201
HpaII CCGG 1 cut(s) 948
HphI GGTGA 4 cut(s) 354, 452, 485, 1289
Hpy166II GTNNAC 8 cut(s) 339, 739, 1358, 1547, 2050, 2236, 2255, 2327
Hpy8I GTNNAC 8 cut(s) 339, 739, 1358, 1547, 2050, 2236, 2255, 2327
Hpy99I CGWCG 1 cut(s) 600
HpyCH4III ACNGT 3 cut(s) 60, 1134, 2054
HpyCH4IV ACGT 2 cut(s) 1742, 1990
HpyF10VI GCNNNNNNNGC 2 cut(s) 848, 1263
HpyF3I CTNAG 4 cut(s) 1443, 1594, 2306, 2362
HpySE526I ACGT 2 cut(s) 1742, 1990
HspAI GCGC 1 cut(s) 66
KpnI GGTACC 1 cut(s) 1470
Kzo9I GATC 9 cut(s) 559, 638, 875, 1050, 1099, 1452, 1635, 1753, 1867
LmnI GCTCC 5 cut(s) 99, 304, 434, 839, 930
Lsp1109I GCAGC 6 cut(s) 300, 373, 876, 1667, 2097, 2254
LweI GCATC 1 cut(s) 699
MaeII ACGT 2 cut(s) 1742, 1990
MaeIII GTNAC 9 cut(s) 16, 54, 173, 346, 473, 795, 810, 827, 1128
MalI GATC 9 cut(s) 561, 640, 877, 1052, 1101, 1454, 1637, 1755, 1869
MboI GATC 9 cut(s) 559, 638, 875, 1050, 1099, 1452, 1635, 1753, 1867
MboII GAAGA 8 cut(s) 31, 145, 738, 1060, 1403, 1622, 1637, 2104
MflI RGATCY 3 cut(s) 875, 1099, 1867
MhlI GDGCHC 2 cut(s) 2238, 2257
MlyI GAGTC 3 cut(s) 307, 818, 1384
MmeI TCCRAC 1 cut(s) 1418
Mph1103I ATGCAT 1 cut(s) 2146
MslI CAYNNNNRTG 1 cut(s) 471
MspCI CTTAAG 1 cut(s) 716
MspI CCGG 1 cut(s) 948
MspR9I CCNGG 5 cut(s) 129, 269, 471, 544, 1157
MvaI CCWGG 5 cut(s) 129, 269, 471, 544, 1157
MwoI GCNNNNNNNGC 2 cut(s) 848, 1263
NcoI CCATGG 2 cut(s) 665, 2016
NdeI CATATG 2 cut(s) 733, 768
NdeII GATC 9 cut(s) 559, 638, 875, 1050, 1099, 1452, 1635, 1753, 1867
NlaIV GGNNCC 2 cut(s) 1101, 1468
NmuCI GTSAC 4 cut(s) 54, 473, 795, 810
NsiI ATGCAT 1 cut(s) 2146
NspI RCATGY 1 cut(s) 846
NspV TTCGAA 1 cut(s) 141
PagI TCATGA 1 cut(s) 1837
PceI AGGCCT 1 cut(s) 2341
PfeI GAWTC 5 cut(s) 443, 820, 1385, 1841, 2201
PflMI CCANNNNNTGG 1 cut(s) 569
PinAI ACCGGT 1 cut(s) 947
PkrI GCNGC 6 cut(s) 290, 388, 866, 1682, 2087, 2269
PleI GAGTC 3 cut(s) 306, 817, 1384
PmaCI CACGTG 1 cut(s) 1991
PmlI CACGTG 1 cut(s) 1991
PpsI GAGTC 3 cut(s) 306, 817, 1384
Ppu21I YACGTR 1 cut(s) 1991
PshBI ATTAAT 2 cut(s) 633, 2397
PsiI TTATAA 1 cut(s) 1539
Psp6I CCWGG 5 cut(s) 127, 267, 469, 542, 1155
PspCI CACGTG 1 cut(s) 1991
PspFI CCCAGC 1 cut(s) 2021
PspGI CCWGG 5 cut(s) 127, 267, 469, 542, 1155
PspN4I GGNNCC 2 cut(s) 1101, 1468
PspPI GGNCC 5 cut(s) 662, 945, 1436, 1529, 2324
PstI CTGCAG 1 cut(s) 391
PsuI RGATCY 3 cut(s) 875, 1099, 1867
RsaI GTAC 6 cut(s) 806, 909, 1068, 1199, 1468, 2070
RsaNI GTAC 6 cut(s) 805, 908, 1067, 1198, 1467, 2069
RseI CAYNNNNRTG 1 cut(s) 471
SatI GCNGC 6 cut(s) 289, 387, 865, 1681, 2086, 2268
Sau3AI GATC 9 cut(s) 559, 638, 875, 1050, 1099, 1452, 1635, 1753, 1867
Sau96I GGNCC 5 cut(s) 662, 945, 1436, 1529, 2324
SchI GAGTC 3 cut(s) 307, 818, 1384
ScrFI CCNGG 5 cut(s) 129, 269, 471, 544, 1157
SduI GDGCHC 2 cut(s) 2238, 2257
SfaNI GCATC 1 cut(s) 699
SfcI CTRYAG 3 cut(s) 387, 1482, 2050
SfuI TTCGAA 1 cut(s) 141
SinI GGWCC 4 cut(s) 945, 1436, 1529, 2324
SmiMI CAYNNNNRTG 1 cut(s) 471
SmlI CTYRAG 2 cut(s) 716, 800
SmoI CTYRAG 2 cut(s) 716, 800
SpeI ACTAGT 1 cut(s) 374
SseBI AGGCCT 1 cut(s) 2341
SsiI CCGC 2 cut(s) 2270, 2381
SspI AATATT 2 cut(s) 138, 1798
StuI AGGCCT 1 cut(s) 2341
StyD4I CCNGG 5 cut(s) 127, 267, 469, 542, 1155
StyI CCWWGG 3 cut(s) 665, 1230, 2016
TaaI ACNGT 3 cut(s) 60, 1134, 2054
TaiI ACGT 2 cut(s) 1745, 1993
TaqI TCGA 5 cut(s) 141, 709, 1388, 1414, 1752
TfiI GAWTC 5 cut(s) 443, 820, 1385, 1841, 2201
TscAI CASTG 2 cut(s) 1011, 1139
TseFI GTSAC 4 cut(s) 54, 473, 795, 810
TseI GCWGC 6 cut(s) 288, 386, 864, 1680, 2085, 2267
Tsp45I GTSAC 4 cut(s) 54, 473, 795, 810
TspRI CASTG 2 cut(s) 1011, 1139
Van91I CCANNNNNTGG 1 cut(s) 569
Vha464I CTTAAG 1 cut(s) 716
VneI GTGCAC 2 cut(s) 2234, 2253
VpaK11BI GGWCC 4 cut(s) 945, 1436, 1529, 2324
VspI ATTAAT 2 cut(s) 633, 2397
XapI RAATTY 3 cut(s) 325, 680, 1914
XbaI TCTAGA 2 cut(s) 872, 1960
XceI RCATGY 1 cut(s) 846
XmiI GTMKAC 3 cut(s) 738, 1546, 2049
Zsp2I ATGCAT 1 cut(s) 2146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.