RchiOBHm_Chr5g0005301

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
3399333 .. 3405256
5924 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ28653

Sequence Viewer

Length: 2484 bp
ATGAATATAGTTAGAGAAAGATTTAGAGAACTCCAATGTGCATTAGTTGTTTTAACAATAACTCCTTCCCAACCATTGGCACATGGACAGACTCTTGTCTCCTCTGGCCGCATTTTCGAATTGGGTTTCTTCAGTCCTAATGGTTCTGCTAAAAAGTATGTGGGGTTATGGCACAAGAATGTACTTCCGCGTAAAATAGTGTGGGTGGCCAACAGAGAAAATCCTCTTGCAGTTGCAGACAGCTTGGCTACTTTGAGAGTTGGCACGAATGGGAATCTGGAGCTTGTAGATGGGAAGAAGATATCTGTCTGGTCAACCAATACTACTTTTCAGGTACCATCATCTACTACTAGTTCAGTCATTGCATCTCTTTTAGACAATGGAAACTTCGTTGTCGAATATAGTGGCTATCAATTGTGGGAGAGTTTTGATTACCCTGCTGACACAATCCTAAAAGACCAGCTGCTGGGCTTTGATAGCAAATCTGGAAGAAAGAATGTCATGACTTCCTGGAAAAGTGAAAGTGATCCATCAACTGGGAAGTATTCGGTAGGACTGACACCTGAGACACCATCACAAGTGTTCATTTGGATCAATGGATCAATTCCCTATTGGAGGAGTGGGCCTTGGGATAGATCAAAGTTCATTGGCATACCAGATATGGATGATCGATATGGAAGTGGATTTAGTCTATATGAGAATTTAACAGCAAAGTACTTCTCTTATAGTTTTTCTGACAGTACTCTCGCATATTTAGACATCTCTTCAGAAGGAAGATCAAAGCTTATGCTGTCAGAAAGTGGCAAGAACTGGTATCCAAACTTCAGTGCACGAACTAATCCCTGCGACAATTATGGAGCATGCGGACCTTTTGGTGTTTGCAAAGCTTTTGAATCTCCAATATGTAGGTGTTTGAAAGGGTTTGTACCAAAGTCAGATGAGGAATGGAGCAAAGGAACCTGGACAGGAGGTTGTGTGAGGCGAAACAAATTGTCTTGTCAAAGTGACACAATCAAGTCAGTCTCATTGAGAGCTAAAGAAGATGATGATTGGTTTAAGAAGATGACTATGTTGAAAGTACCAGATTCTCATGAATTTGTTGTTACATCTTTAGATGTTGACAACGAGCATGGTGCCTGCGAGAAGCAGTGCCTAAGCAATTGTTCTTGCCTGGCTTATGCATTTGTAAATAAAATAGGGTGTTTGGTCTGGTCCAAAGAGCTTATTGACATACAGAAATTTTCGTTTGGCGGAGAAGATCTCTATATTCGCCTAGCAGAAGCAGAACGAGATGAAGGTAAACCAATAAAGTTAATTGCCACCCTTACAGCTATTTGTTCTATCACTATCCTGGGGGCCATAGTGTATGGTTGGCATAGGCTTGGAGCTGACCAAAAAGGAAAACATATGGAATTAACGGATACGATTCTTTCTTCAAGAGATGCTCTTCGAGAATATATAGGACAATCTGATCTATCAGAGCGTTTGATCTATGATTTTGATACCATATCGACTGCTACAAACAATTTCAACATCACAAACAAACTCGGGCAAGGAGGCTTTGGTCCAGTTTATAAGGGTATGCTACAAGAAGGGAAGGAAATTGCGGTAAAAAGACTATCTAGCGGCTCAGGTCAAGGTATTCAAGAATTCAAGAATGAGATGTCGTTCATTTCCAATCTTCAGCACAAAAATCTTGTTAGGCTCTTGGGTTGCTGCATTAAAGATGAGGAGAAGTTACTGATTTATGAATTCATGGCAAACAAAAGCCTCGATACTTTGTTGTGCGATCAAACGAGAAAAAAAGTGCTTGATTGGGCTACACGCTTTAGCATTATCCAAGGTGTTGCTAGAGGGCTTCTTTATCTTCATCATGATTCCTGTTTGAAGGTGGTACATAGAGATTTGAAAGTCAGCAACATTCTCTTGGATGACAAAATGATCCCAAAAATTTCAGATTTTGGGTTGGCACGTATAATTGAAGCTACTCAGAATCTAGAAAATACTCGGAGGGTTGTGGGAACAATTGGTTATATGTCTCCAGAGTATGCCATGAGAGGGTTATTTTCTGAAAAATCTGATGTCTACAGCTTTGGGGTCTCGGTCTTGGAAATTATTAGTGGCAAGAAGAATAGTAGTTTCTTTATCCATGACCAACAGCTAGGCTTTCTATCCTATGTATGGCAATTATGGAACGAAGGCAGGGGGTTGGAGTTAGTAGATGAAGTATTGGGTGATTTATATTCACCATCACAGGTGATGAGATGCATTCATATTGGGCTTCTTTGTATACAAGACAATGCAGCAGATAGGCCAACTATGCATGATGTTGTTTTCATACTAAGTAGTGAGATAGATGCCTCTTCAAAACCTAAGCAGCCTGCTTACACTTTCCAAAACCCAGTCTCTCAATTTCAACCACATGATGTTGATACTCGCTCTAGTAATGCTGAAACCACCATAACAGTGATCGAAGGACGATAG

Protein Analysis

827

Amino Acids

92.59

Weight (kDa)

6.32

Isoelectric Point (pI)

35.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 66 - 172 8.7e-27 D-mannose binding lectin
S_locus_glycop PF00954 205 - 312 2.8e-27 S-locus glycoprotein domain
PAN_2 PF08276 348 - 411 5.2e-14 PAN-like domain
PK_Tyr_Ser-Thr PF07714 511 - 778 8.2e-49 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 511 - 711 4.7e-43 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1575
Acc65I GGTACC 1 cut(s) 334
AccB1I GGYRCC 2 cut(s) 334, 1133
AccB7I CCANNNNNTGG 3 cut(s) 76, 466, 536
AccI GTMKAC 2 cut(s) 2085, 2290
AccII CGCG 1 cut(s) 190
AciI CCGC 6 cut(s) 109, 188, 864, 1251, 1607, 1626
AclWI GGATC 4 cut(s) 521, 599, 607, 1936
AcoI YGGCCR 2 cut(s) 106, 207
AcsI RAATTY 6 cut(s) 700, 1094, 1238, 1649, 1751, 1950
AcuI CTGAAG 4 cut(s) 115, 750, 808, 1667
AfaI GTAC 7 cut(s) 183, 336, 716, 742, 927, 1080, 1896
AfiI CCNNNNNNNGG 6 cut(s) 76, 466, 536, 615, 2058, 2181
AhlI ACTAGT 1 cut(s) 350
AjnI CCWGG 4 cut(s) 509, 959, 1170, 1350
Alw21I GWGCWC 1 cut(s) 832
Alw26I GTCTC 6 cut(s) 103, 560, 1027, 2043, 2104, 2410
Alw44I GTGCAC 1 cut(s) 828
AlwI GGATC 4 cut(s) 521, 599, 607, 1936
AlwNI CAGNNNCTG 1 cut(s) 466
Ama87I CYCGRG 1 cut(s) 1547
AoxI GGCC 5 cut(s) 106, 207, 623, 1356, 2312
ApaLI GTGCAC 1 cut(s) 828
ApeKI GCWGC 4 cut(s) 463, 1716, 2303, 2377
ApoI RAATTY 6 cut(s) 700, 1094, 1238, 1649, 1751, 1950
Asp718I GGTACC 1 cut(s) 334
AspS9I GGNCC 5 cut(s) 623, 866, 1212, 1356, 1565
AsuHPI GGTGA 3 cut(s) 2238, 2246, 2269
AsuII TTCGAA 1 cut(s) 117
AvaI CYCGRG 1 cut(s) 1547
AvaII GGWCC 3 cut(s) 866, 1212, 1565
BaeGI GKGCMC 1 cut(s) 832
BalI TGGCCA 1 cut(s) 209
BanI GGYRCC 2 cut(s) 334, 1133
BarI GAAGNNNNNNTAC 2 cut(s) 806, 838
Bbv12I GWGCWC 1 cut(s) 832
BbvI GCAGC 4 cut(s) 450, 1703, 2315, 2389
BccI CCATC 5 cut(s) 284, 346, 538, 580, 2257
BcgI CGANNNNNNTGC 2 cut(s) 1115, 1149
BciT130I CCWGG 4 cut(s) 511, 961, 1172, 1352
BciVI GTATCC 2 cut(s) 825, 1414
BcoDI GTCTC 6 cut(s) 103, 560, 1027, 2043, 2104, 2410
BcuI ACTAGT 1 cut(s) 350
BfaI CTAG 7 cut(s) 351, 1274, 1623, 1851, 1997, 2162, 2442
BfmI CTRYAG 1 cut(s) 2086
BfuI GTATCC 2 cut(s) 825, 1414
BglII AGATCT 1 cut(s) 1258
BisI GCNGC 6 cut(s) 109, 464, 1627, 1717, 2304, 2378
BlsI GCNGC 6 cut(s) 110, 465, 1628, 1718, 2305, 2379
BmcAI AGTACT 2 cut(s) 716, 742
Bme1390I CCNGG 4 cut(s) 511, 961, 1172, 1352
Bme18I GGWCC 3 cut(s) 866, 1212, 1565
BmeT110I CYCGRG 1 cut(s) 1547
BmgT120I GGNCC 5 cut(s) 623, 866, 1212, 1356, 1565
BmiI GGNNCC 4 cut(s) 336, 958, 1135, 1357
BmrFI CCNGG 4 cut(s) 511, 961, 1172, 1352
BmrI ACTGGG 2 cut(s) 546, 2396
BmsI GCATC 4 cut(s) 374, 1432, 2255, 2347
BmuI ACTGGG 2 cut(s) 546, 2396
BoxI GACNNNNGTC 1 cut(s) 95
BplI GAGNNNNNCTC 2 cut(s) 1245, 1277
BpmI CTGGAG 2 cut(s) 299, 2025
Bpu10I CCTNAGC 3 cut(s) 1154, 1630, 2373
Bpu14I TTCGAA 1 cut(s) 117
Bsa29I ATCGAT 1 cut(s) 670
BsaAI YACGTR 1 cut(s) 1973
BsaI GGTCTC 1 cut(s) 2104
BsaJI CCNNGG 3 cut(s) 626, 1351, 1840
BsaXI ACNNNNNCTCC 4 cut(s) 46, 76, 960, 990
Bsc4I CCNNNNNNNGG 6 cut(s) 76, 466, 536, 615, 2058, 2181
Bse1I ACTGG 4 cut(s) 541, 815, 1568, 2402
Bse3DI GCAATG 1 cut(s) 360
BseBI CCWGG 4 cut(s) 511, 961, 1172, 1352
BseCI ATCGAT 1 cut(s) 670
BseDI CCNNGG 3 cut(s) 626, 1351, 1840
BseGI GGATG 2 cut(s) 670, 1936
BseLI CCNNNNNNNGG 6 cut(s) 76, 466, 536, 615, 2058, 2181
BseMI GCAATG 1 cut(s) 360
BseMII CTCAG 3 cut(s) 555, 1644, 2003
BseNI ACTGG 4 cut(s) 541, 815, 1568, 2402
BseRI GAGGAG 3 cut(s) 91, 631, 1745
BseSI GKGCMC 1 cut(s) 832
BseXI GCAGC 4 cut(s) 450, 1703, 2315, 2389
BseYI CCCAGC 1 cut(s) 466
Bsh1236I CGCG 1 cut(s) 190
BshFI GGCC 5 cut(s) 108, 209, 625, 1358, 2314
BshNI GGYRCC 2 cut(s) 334, 1133
BshVI ATCGAT 1 cut(s) 670
BsiHKAI GWGCWC 1 cut(s) 832
BsiHKCI CYCGRG 1 cut(s) 1547
BslI CCNNNNNNNGG 6 cut(s) 76, 466, 536, 615, 2058, 2181
BsmAI GTCTC 6 cut(s) 103, 560, 1027, 2043, 2104, 2410
BsmI GAATGC 1 cut(s) 2268
BsnI GGCC 5 cut(s) 108, 209, 625, 1358, 2314
Bso31I GGTCTC 1 cut(s) 2104
BsoBI CYCGRG 1 cut(s) 1547
Bsp119I TTCGAA 1 cut(s) 117
Bsp1286I GDGCHC 1 cut(s) 832
BspACI CCGC 6 cut(s) 109, 188, 864, 1251, 1607, 1626
BspANI GGCC 5 cut(s) 108, 209, 625, 1358, 2314
BspCNI CTCAG 3 cut(s) 556, 1643, 2002
BspDI ATCGAT 1 cut(s) 670
BspFNI CGCG 1 cut(s) 190
BspHI TCATGA 3 cut(s) 501, 1090, 1873
BspLI GGNNCC 4 cut(s) 336, 958, 1135, 1357
BspPI GGATC 4 cut(s) 521, 599, 607, 1936
BspQI GCTCTTC 1 cut(s) 1452
BspT104I TTCGAA 1 cut(s) 117
BspT107I GGYRCC 2 cut(s) 334, 1133
BspTNI GGTCTC 1 cut(s) 2104
BsrDI GCAATG 1 cut(s) 360
BsrI ACTGG 4 cut(s) 541, 815, 1568, 2402
BssECI CCNNGG 3 cut(s) 626, 1351, 1840
BssNAI GTATAC 1 cut(s) 2291
BssT1I CCWWGG 2 cut(s) 626, 1840
Bst1107I GTATAC 1 cut(s) 2291
Bst2UI CCWGG 4 cut(s) 511, 961, 1172, 1352
Bst4CI ACNGT 2 cut(s) 740, 2467
Bst6I CTCTTC 3 cut(s) 769, 1452, 2368
BstBAI YACGTR 1 cut(s) 1973
BstBI TTCGAA 1 cut(s) 117
BstC8I GCNNGC 3 cut(s) 862, 1138, 2382
BstDEI CTNAG 6 cut(s) 564, 1154, 1630, 1989, 2342, 2373
BstENI CCTNNNNNAGG 1 cut(s) 613
BstF5I GGATG 2 cut(s) 670, 1936
BstFNI CGCG 1 cut(s) 190
BstMAI GTCTC 6 cut(s) 103, 560, 1027, 2043, 2104, 2410
BstMWI GCNNNNNNNGC 2 cut(s) 477, 2320
BstNI CCWGG 4 cut(s) 511, 961, 1172, 1352
BstNSI RCATGY 1 cut(s) 864
BstPAI GACNNNNGTC 1 cut(s) 95
BstSCI CCNGG 4 cut(s) 509, 959, 1170, 1350
BstSFI CTRYAG 1 cut(s) 2086
BstSLI GKGCMC 1 cut(s) 832
BstUI CGCG 1 cut(s) 190
BstV1I GCAGC 4 cut(s) 450, 1703, 2315, 2389
BstX2I RGATCY 1 cut(s) 1258
BstYI RGATCY 1 cut(s) 1258
BstZ17I GTATAC 1 cut(s) 2291
Bsu15I ATCGAT 1 cut(s) 670
BsuI GTATCC 2 cut(s) 825, 1414
BsuRI GGCC 5 cut(s) 108, 209, 625, 1358, 2314
BsuTUI ATCGAT 1 cut(s) 670
BtsCI GGATG 2 cut(s) 670, 1936
BtsI GCAGTG 1 cut(s) 1154
BtsIMutI CAGTG 3 cut(s) 832, 1154, 2472
Cac8I GCNNGC 3 cut(s) 862, 1138, 2382
CaiI CAGNNNCTG 1 cut(s) 466
CciI TCATGA 3 cut(s) 501, 1090, 1873
Cfr13I GGNCC 5 cut(s) 623, 866, 1212, 1356, 1565
ClaI ATCGAT 1 cut(s) 670
Csp6I GTAC 7 cut(s) 182, 335, 715, 741, 926, 1079, 1895
CviQI GTAC 7 cut(s) 182, 335, 715, 741, 926, 1079, 1895
DdeI CTNAG 6 cut(s) 564, 1154, 1630, 1989, 2342, 2373
EaeI YGGCCR 2 cut(s) 106, 207
Eam1104I CTCTTC 3 cut(s) 769, 1452, 2368
EarI CTCTTC 3 cut(s) 769, 1452, 2368
EciI GGCGGA 1 cut(s) 1266
Eco130I CCWWGG 2 cut(s) 626, 1840
Eco31I GGTCTC 1 cut(s) 2104
Eco32I GATATC 1 cut(s) 303
Eco47I GGWCC 3 cut(s) 866, 1212, 1565
Eco57I CTGAAG 4 cut(s) 115, 750, 808, 1667
Eco88I CYCGRG 1 cut(s) 1547
EcoNI CCTNNNNNAGG 1 cut(s) 613
EcoRI GAATTC 2 cut(s) 1649, 1751
EcoRII CCWGG 4 cut(s) 509, 959, 1170, 1350
EcoRV GATATC 1 cut(s) 303
EcoT14I CCWWGG 2 cut(s) 626, 1840
EcoT22I ATGCAT 3 cut(s) 1183, 2270, 2325
ErhI CCWWGG 2 cut(s) 626, 1840
FauNDI CATATG 1 cut(s) 1407
FblI GTMKAC 2 cut(s) 2085, 2290
Fnu4HI GCNGC 6 cut(s) 109, 464, 1627, 1717, 2304, 2378
FokI GGATG 2 cut(s) 677, 1943
Fsp4HI GCNGC 6 cut(s) 109, 464, 1627, 1717, 2304, 2378
FspBI CTAG 7 cut(s) 351, 1274, 1623, 1851, 1997, 2162, 2442
GluI GCNGC 6 cut(s) 109, 464, 1627, 1717, 2304, 2378
GsaI CCCAGC 1 cut(s) 470
GsuI CTGGAG 2 cut(s) 299, 2025
HaeIII GGCC 5 cut(s) 108, 209, 625, 1358, 2314
HincII GTYRAC 2 cut(s) 315, 1120
HindII GTYRAC 2 cut(s) 315, 1120
HindIII AAGCTT 2 cut(s) 782, 885
HinfI GANTC 7 cut(s) 91, 274, 893, 1085, 1426, 1877, 1993
HphI GGTGA 3 cut(s) 2238, 2246, 2269
Hpy166II GTNNAC 6 cut(s) 315, 830, 1120, 1301, 2086, 2291
Hpy8I GTNNAC 6 cut(s) 315, 830, 1120, 1301, 2086, 2291
HpyAV CCTTC 8 cut(s) 75, 764, 1289, 1586, 1591, 1882, 2192, 2468
HpyCH4III ACNGT 2 cut(s) 740, 2467
HpyCH4IV ACGT 1 cut(s) 1972
HpyF10VI GCNNNNNNNGC 2 cut(s) 477, 2320
HpyF3I CTNAG 6 cut(s) 564, 1154, 1630, 1989, 2342, 2373
HpySE526I ACGT 1 cut(s) 1972
KpnI GGTACC 1 cut(s) 338
LguI GCTCTTC 1 cut(s) 1452
LmnI GCTCC 4 cut(s) 280, 857, 948, 1385
Lsp1109I GCAGC 4 cut(s) 450, 1703, 2315, 2389
LweI GCATC 4 cut(s) 374, 1432, 2255, 2347
MaeI CTAG 7 cut(s) 351, 1274, 1623, 1851, 1997, 2162, 2442
MaeII ACGT 1 cut(s) 1972
MaeIII GTNAC 3 cut(s) 1004, 1102, 1737
MfeI CAATTG 3 cut(s) 413, 1159, 2025
MflI RGATCY 1 cut(s) 1258
MhlI GDGCHC 1 cut(s) 832
MlsI TGGCCA 1 cut(s) 209
MluNI TGGCCA 1 cut(s) 209
MlyI GAGTC 1 cut(s) 85
MmeI TCCRAC 1 cut(s) 2190
Mox20I TGGCCA 1 cut(s) 209
Mph1103I ATGCAT 3 cut(s) 1183, 2270, 2325
MscI TGGCCA 1 cut(s) 209
MseI TTAA 6 cut(s) 53, 704, 1056, 1313, 1415, 1722
MslI CAYNNNNRTG 2 cut(s) 177, 2465
Msp20I TGGCCA 1 cut(s) 209
MspA1I CMGCKG 1 cut(s) 463
MspR9I CCNGG 4 cut(s) 511, 961, 1172, 1352
MunI CAATTG 3 cut(s) 413, 1159, 2025
Mva1269I GAATGC 1 cut(s) 2268
MvaI CCWGG 4 cut(s) 511, 961, 1172, 1352
MvnI CGCG 1 cut(s) 190
MwoI GCNNNNNNNGC 2 cut(s) 477, 2320
NdeI CATATG 1 cut(s) 1407
NlaIV GGNNCC 4 cut(s) 336, 958, 1135, 1357
NmuCI GTSAC 1 cut(s) 1004
NsiI ATGCAT 3 cut(s) 1183, 2270, 2325
NspI RCATGY 1 cut(s) 864
NspV TTCGAA 1 cut(s) 117
PaeI GCATGC 1 cut(s) 864
PagI TCATGA 3 cut(s) 501, 1090, 1873
PciSI GCTCTTC 1 cut(s) 1452
PctI GAATGC 1 cut(s) 2268
PfeI GAWTC 6 cut(s) 274, 893, 1085, 1426, 1877, 1993
PflMI CCANNNNNTGG 3 cut(s) 76, 466, 536
PfoI TCCNGGA 1 cut(s) 509
PkrI GCNGC 6 cut(s) 110, 465, 1628, 1718, 2305, 2379
PleI GAGTC 1 cut(s) 85
PpsI GAGTC 1 cut(s) 85
Ppu21I YACGTR 1 cut(s) 1973
PshAI GACNNNNGTC 1 cut(s) 95
PsiI TTATAA 1 cut(s) 1575
Psp6I CCWGG 4 cut(s) 509, 959, 1170, 1350
PspFI CCCAGC 1 cut(s) 466
PspGI CCWGG 4 cut(s) 509, 959, 1170, 1350
PspN4I GGNNCC 4 cut(s) 336, 958, 1135, 1357
PspPI GGNCC 5 cut(s) 623, 866, 1212, 1356, 1565
PstNI CAGNNNCTG 1 cut(s) 466
PsuI RGATCY 1 cut(s) 1258
PvuII CAGCTG 1 cut(s) 463
RsaI GTAC 7 cut(s) 183, 336, 716, 742, 927, 1080, 1896
RsaNI GTAC 7 cut(s) 182, 335, 715, 741, 926, 1079, 1895
RseI CAYNNNNRTG 2 cut(s) 177, 2465
SapI GCTCTTC 1 cut(s) 1452
SaqAI TTAA 6 cut(s) 53, 704, 1056, 1313, 1415, 1722
SatI GCNGC 6 cut(s) 109, 464, 1627, 1717, 2304, 2378
Sau96I GGNCC 5 cut(s) 623, 866, 1212, 1356, 1565
ScaI AGTACT 2 cut(s) 716, 742
SchI GAGTC 1 cut(s) 85
ScrFI CCNGG 4 cut(s) 511, 961, 1172, 1352
SduI GDGCHC 1 cut(s) 832
SfaNI GCATC 4 cut(s) 374, 1432, 2255, 2347
SfcI CTRYAG 1 cut(s) 2086
SfuI TTCGAA 1 cut(s) 117
SinI GGWCC 3 cut(s) 866, 1212, 1565
SmiMI CAYNNNNRTG 2 cut(s) 177, 2465
SpeI ACTAGT 1 cut(s) 350
SphI GCATGC 1 cut(s) 864
SsiI CCGC 6 cut(s) 109, 188, 864, 1251, 1607, 1626
SspMI CTAG 7 cut(s) 351, 1274, 1623, 1851, 1997, 2162, 2442
StyD4I CCNGG 4 cut(s) 509, 959, 1170, 1350
StyI CCWWGG 2 cut(s) 626, 1840
TaaI ACNGT 2 cut(s) 740, 2467
TaiI ACGT 1 cut(s) 1975
TaqI TCGA 7 cut(s) 117, 396, 670, 1450, 1511, 1773, 2472
TaqII GACCGA 1 cut(s) 2092
TatI WGTACW 3 cut(s) 181, 714, 740
TauI GCSGC 2 cut(s) 111, 1629
TfiI GAWTC 6 cut(s) 274, 893, 1085, 1426, 1877, 1993
Tru1I TTAA 6 cut(s) 53, 704, 1056, 1313, 1415, 1722
Tru9I TTAA 6 cut(s) 53, 704, 1056, 1313, 1415, 1722
TscAI CASTG 3 cut(s) 832, 1154, 2472
TseFI GTSAC 1 cut(s) 1004
TseI GCWGC 4 cut(s) 463, 1716, 2303, 2377
Tsp45I GTSAC 1 cut(s) 1004
TspGWI ACGGA 1 cut(s) 1433
TspRI CASTG 3 cut(s) 832, 1154, 2472
Van91I CCANNNNNTGG 3 cut(s) 76, 466, 536
VneI GTGCAC 1 cut(s) 828
VpaK11BI GGWCC 3 cut(s) 866, 1212, 1565
XagI CCTNNNNNAGG 1 cut(s) 613
XapI RAATTY 6 cut(s) 700, 1094, 1238, 1649, 1751, 1950
XbaI TCTAGA 1 cut(s) 1996
XceI RCATGY 1 cut(s) 864
XmiI GTMKAC 2 cut(s) 2085, 2290
XspI CTAG 7 cut(s) 351, 1274, 1623, 1851, 1997, 2162, 2442
ZrmI AGTACT 2 cut(s) 716, 742
Zsp2I ATGCAT 3 cut(s) 1183, 2270, 2325
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.