MD17G1249800.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0000033
Physical Location & Seq
Reverse (-)
29858691 .. 29864775
6085 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1249800.v1.1.491

Sequence Viewer

Length: 2046 bp
ATGTCACATACTGAGGATTCAGAGGTAGAGGTGCGATTTCCAGACGAATCAAGAAGAAATTTGGGCGGAGCAGTCATCGTGCCGTCAATAATTCCGGTGAGACTATCGGCGGAAGATCGAAGCAAACAGCGCACTTCAGGTGCACATGCAGCAAAAATCACTTTCACAAACCACTGCTCCTACACTGTCTGGCCAGGAACCCTAACCACTAACCAAAAACCTCAATTATCACTCACCGGGTTCGAACTAGCATCCAAAGCTAGCCGGTCAATAGACACTCCATCCTCATGGTCTGGTCGCTTCTGGGCCCGAACCAGATGCTCCACAGACGCCGTTGGAAATTTCACTTGTGAAACTGCAGACTGTGGCTCTGGCCAGGTCGCATGCAACGGTGCAGGCGGAGCTCCACCAGCAACTTTAGTAGAAATCACAATCGCAGGAATCGAGGGTCTAGATTTTTACGATGTTAGCCTTGTTGACGGCTTCAACTTGCCCATGTCCGTCGCCCCACAAGGCGGCACCGGCAAGTGCCAGGCCTCGACTTGCGATGCGAATGTTAACGCGGCATGCCCGGCTGAGTTACAAGTGAAATCGGCTGATGGGAGTGTCATCAGTTGCAAAAGCGCTTGCTTGGAGTTCACCGATCCGAAGTTGTGTCAACCCACAGAGTACTCTAAGATGTTTAAGCAGCAATGCCCTCAAGCTTATAGCTACGCTTTGGATGATGCAAACAGCACATTCACCTGCAATGGCGGACCTGACTACGCCATTACATTCTGCTCATATGGTCGATGGGCCGAGGGCCCCATTCCACCAGCACCGTCCCCACTTCACCAACTGCCCAATCCGTCAGGTAAAGGAAAGCCAATAAAGTTAATTGTGAGCCTTACAGTTGTTTGTTTTATCGGTGTATTGGGTGCCATAGTGTTTGGTTTGTGCAGGATGAGAGCTAAGCAAAAAGGACACATCAAATTAACAAGGGAACACATCAAAATAACAAGGGACGCCCTTCAAGAATATATAGGTGGAAAACATGATCTGTCTGAGTTACTGATCTATGATTTTGATAGCATATTAGTTGCTACGGACAATTTCAGCATAGAAAACAAACTCGGGCAAGGAGGCTTTGGTCCAGTTTATTGGGGTAAGCTAGCAGAAGGGAAGGAAATAGCAGTAAAAAGACTATCCAGTACCTCAGGGCAAGGTGTAGTGGAGTTCAAGAATGAAATGTTATTGATCTCCAATCTCCAACACAAAAATCTGGTCAGAATCATGGGTTGCTGCGTTAAAGAGGATGAGAAGTTACTGATTTATGAGTTCATGCCAAACAAAAGCTTGGATACTTTTCTTTTCGATTCGACGAGAAGAGCAGTGCTTGATTGGGGTACACGTTTTAATATTATTCAAGTTGTTGCCAGAGGGCTTGTTTATCTCCATCATGATTCCTATTTGAAGGTAATACATAGAGATCTAAAAGTAAGCAACATTCTTTTGGATGAGAAAATGAACCCAAAAATTTCAGATTTTGGATTGGCACGTGTGGTTGAAGGGACACAGAATTTAGAAAATACTCAGAGAGTTGTGGGAACGCTTGGATATATATCTCCAGAGTATGCCATGGGTGGAATATTTTTTCAAAAATCTGATGTCTACAGCTTTGGGGTCTTGGTATTGGAGATTATTAGCAGCAAGAAGAATACGGCCTTCTATATCTATGATCGACAGCTAGGCTTACTAGCCTATGCATGGCAGTTATGGAAGGAAGGCAGGGAATTGGAGTTGGTAGATGAAATGTTGGCGGCTGATTCATATTCGGCTCCAGAAGTAATGAAATGTGTGCATATAGGGCTGCTTTGTGTACAGGACAATCCGACGGATAGGCCGAGCATGCCGGATGTAATTTTTATGCTAAATGGTTCCACAAATGTTATTGGTGGTCCACAACCTAAACAGCCTCTATTCACTATCCAAAACTCAGTCTCTCATCCTCAACCACAGCCTTCGAATAATGAAGCTACAATGACAATGATTAATGAAGGACGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase_Tyr Thaumatin

Protein Analysis

682

Amino Acids

74.62

Weight (kDa)

6.16

Isoelectric Point (pI)

40.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Thaumatin PF00314 57 - 261 1e-69 Thaumatin family
PK_Tyr_Ser-Thr PF07714 366 - 634 9.6e-46 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 366 - 566 4.5e-41 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 752
Acc36I ACCTGC 1 cut(s) 752
AccB1I GGYRCC 2 cut(s) 518, 917
AccI GTMKAC 1 cut(s) 1650
AccII CGCG 1 cut(s) 563
AciI CCGC 7 cut(s) 66, 110, 399, 516, 563, 753, 1799
AclWI GGATC 1 cut(s) 638
AcoI YGGCCR 2 cut(s) 191, 373
AcsI RAATTY 4 cut(s) 58, 340, 1515, 1558
AcuI CTGAAG 1 cut(s) 120
AcvI CACGTG 1 cut(s) 1538
AcyI GRCGYC 2 cut(s) 330, 1005
AfaI GTAC 4 cut(s) 671, 1192, 1387, 1860
AfeI AGCGCT 1 cut(s) 625
AfiI CCNNNNNNNGG 2 cut(s) 515, 1746
AflIII ACRYGT 2 cut(s) 1388, 1537
AgsI TTSAA 7 cut(s) 487, 1013, 1219, 1406, 1453, 1547, 1637
AjnI CCWGG 3 cut(s) 193, 375, 531
Alw21I GWGCWC 2 cut(s) 145, 406
Alw26I GTCTC 2 cut(s) 94, 1984
Alw44I GTGCAC 1 cut(s) 141
AlwI GGATC 1 cut(s) 638
Ama87I CYCGRG 1 cut(s) 1112
Aor51HI AGCGCT 1 cut(s) 625
AoxI GGCC 8 cut(s) 191, 306, 373, 534, 795, 802, 1701, 1880
ApaI GGGCCC 2 cut(s) 310, 806
ApaLI GTGCAC 1 cut(s) 141
ApeKI GCWGC 5 cut(s) 149, 688, 1281, 1686, 1849
ApoI RAATTY 4 cut(s) 58, 340, 1515, 1558
ArsI GACNNNNNNTTYG 2 cut(s) 1248, 1280
AseI ATTAAT 1 cut(s) 2031
AspLEI GCGC 2 cut(s) 132, 626
AspS9I GGNCC 8 cut(s) 306, 307, 755, 795, 802, 803, 1130, 1937
AsuC2I CCSGG 2 cut(s) 238, 572
AsuHPI GGTGA 5 cut(s) 109, 226, 631, 733, 824
AsuII TTCGAA 2 cut(s) 243, 2003
AsuNHI GCTAGC 2 cut(s) 260, 1150
AvaI CYCGRG 1 cut(s) 1112
AvaII GGWCC 3 cut(s) 755, 1130, 1937
AxyI CCTNAGG 1 cut(s) 1195
BaeGI GKGCMC 3 cut(s) 145, 310, 806
BalI TGGCCA 2 cut(s) 193, 375
BanI GGYRCC 2 cut(s) 518, 917
BanII GRGCYC 3 cut(s) 310, 406, 806
BbrPI CACGTG 1 cut(s) 1538
Bbv12I GWGCWC 2 cut(s) 145, 406
BbvI GCAGC 5 cut(s) 161, 700, 1268, 1698, 1836
BccI CCATC 4 cut(s) 289, 593, 786, 1443
BceAI ACGGC 4 cut(s) 67, 317, 496, 1716
BcgI CGANNNNNNTGC 2 cut(s) 300, 334
BciT130I CCWGG 3 cut(s) 195, 377, 533
BciVI GTATCC 1 cut(s) 1333
BcnI CCSGG 2 cut(s) 238, 572
BcoDI GTCTC 2 cut(s) 94, 1984
BfaI CTAG 6 cut(s) 248, 261, 452, 1151, 1727, 1736
BfmI CTRYAG 2 cut(s) 357, 1651
BfoI RGCGCY 1 cut(s) 627
BfuAI ACCTGC 1 cut(s) 752
BfuI GTATCC 1 cut(s) 1333
BglII AGATCT 1 cut(s) 1468
BisI GCNGC 8 cut(s) 150, 517, 564, 689, 1282, 1687, 1800, 1850
BlpI GCTNAGC 1 cut(s) 951
BlsI GCNGC 8 cut(s) 151, 518, 565, 690, 1283, 1688, 1801, 1851
BmcAI AGTACT 1 cut(s) 671
Bme1390I CCNGG 5 cut(s) 195, 238, 377, 533, 572
Bme18I GGWCC 3 cut(s) 755, 1130, 1937
BmeT110I CYCGRG 1 cut(s) 1112
BmgT120I GGNCC 8 cut(s) 306, 307, 755, 795, 802, 803, 1130, 1937
BmiI GGNNCC 8 cut(s) 199, 308, 520, 804, 805, 919, 1818, 1918
BmrFI CCNGG 5 cut(s) 195, 238, 377, 533, 572
BmsI GCATC 4 cut(s) 260, 308, 538, 715
BmtI GCTAGC 2 cut(s) 264, 1154
BpmI CTGGAG 2 cut(s) 1590, 1803
Bpu1102I GCTNAGC 1 cut(s) 951
Bpu14I TTCGAA 2 cut(s) 243, 2003
BpuEI CTTGAG 1 cut(s) 684
BpuMI CCSGG 2 cut(s) 238, 572
BsaAI YACGTR 1 cut(s) 1538
BsaBI GATNNNNATC 1 cut(s) 1600
BsaHI GRCGYC 2 cut(s) 330, 1005
BsaJI CCNNGG 2 cut(s) 798, 1617
BsaWI WCCGGW 1 cut(s) 94
BsaXI ACNNNNNCTCC 2 cut(s) 161, 191
Bsc4I CCNNNNNNNGG 2 cut(s) 515, 1746
Bse118I RCCGGY 2 cut(s) 264, 521
Bse1I ACTGG 2 cut(s) 1133, 1188
Bse21I CCTNAGG 1 cut(s) 1195
Bse3DI GCAATG 2 cut(s) 698, 754
Bse8I GATNNNNATC 1 cut(s) 1600
BseBI CCWGG 3 cut(s) 195, 377, 533
BseDI CCNNGG 2 cut(s) 798, 1617
BseGI GGATG 8 cut(s) 251, 281, 727, 948, 1300, 1501, 1900, 1984
BseJI GATNNNNATC 1 cut(s) 1600
BseLI CCNNNNNNNGG 2 cut(s) 515, 1746
BseMI GCAATG 2 cut(s) 698, 754
BseMII CTCAG 5 cut(s) 567, 1035, 1209, 1586, 1989
BseNI ACTGG 2 cut(s) 1133, 1188
BseSI GKGCMC 3 cut(s) 145, 310, 806
BseXI GCAGC 5 cut(s) 161, 700, 1268, 1698, 1836
BsgI GTGCAG 2 cut(s) 414, 958
Bsh1236I CGCG 1 cut(s) 563
BshFI GGCC 8 cut(s) 193, 308, 375, 536, 797, 804, 1703, 1882
BshNI GGYRCC 2 cut(s) 518, 917
BsiHKAI GWGCWC 2 cut(s) 145, 406
BsiHKCI CYCGRG 1 cut(s) 1112
BsiSI CCGG 6 cut(s) 95, 237, 265, 522, 572, 1892
BslFI GGGAC 3 cut(s) 808, 1016, 1564
BslI CCNNNNNNNGG 2 cut(s) 515, 1746
BsmAI GTCTC 2 cut(s) 94, 1984
BsmFI GGGAC 3 cut(s) 808, 1016, 1564
BsnI GGCC 8 cut(s) 193, 308, 375, 536, 797, 804, 1703, 1882
BsoBI CYCGRG 1 cut(s) 1112
Bsp119I TTCGAA 2 cut(s) 243, 2003
Bsp120I GGGCCC 2 cut(s) 306, 802
Bsp1286I GDGCHC 4 cut(s) 145, 310, 406, 806
Bsp1407I TGTACA 1 cut(s) 1858
Bsp143I GATC 7 cut(s) 115, 643, 1036, 1053, 1236, 1468, 1717
Bsp1720I GCTNAGC 1 cut(s) 951
Bsp19I CCATGG 1 cut(s) 1617
BspACI CCGC 7 cut(s) 66, 110, 399, 516, 563, 753, 1799
BspANI GGCC 8 cut(s) 193, 308, 375, 536, 797, 804, 1703, 1882
BspCNI CTCAG 6 cut(s) 4, 568, 1036, 1208, 1585, 1988
BspFNI CGCG 1 cut(s) 563
BspHI TCATGA 1 cut(s) 1438
BspLI GGNNCC 8 cut(s) 199, 308, 520, 804, 805, 919, 1818, 1918
BspMAI CTGCAG 1 cut(s) 361
BspMI ACCTGC 1 cut(s) 752
BspOI GCTAGC 2 cut(s) 264, 1154
BspPI GGATC 1 cut(s) 638
BspQI GCTCTTC 1 cut(s) 1360
BspT104I TTCGAA 2 cut(s) 243, 2003
BspT107I GGYRCC 2 cut(s) 518, 917
BsrDI GCAATG 2 cut(s) 698, 754
BsrFI RCCGGY 2 cut(s) 264, 521
BsrGI TGTACA 1 cut(s) 1858
BsrI ACTGG 2 cut(s) 1133, 1188
BssAI RCCGGY 2 cut(s) 264, 521
BssECI CCNNGG 2 cut(s) 798, 1617
BssMI GATC 7 cut(s) 115, 643, 1036, 1053, 1236, 1468, 1717
BssNI GRCGYC 2 cut(s) 330, 1005
BssT1I CCWWGG 1 cut(s) 1617
Bst2UI CCWGG 3 cut(s) 195, 377, 533
Bst4CI ACNGT 5 cut(s) 187, 365, 392, 822, 892
Bst6I CTCTTC 1 cut(s) 1360
BstACI GRCGYC 2 cut(s) 330, 1005
BstAUI TGTACA 1 cut(s) 1858
BstBAI YACGTR 1 cut(s) 1538
BstBI TTCGAA 2 cut(s) 243, 2003
BstC8I GCNNGC 7 cut(s) 262, 385, 397, 568, 628, 1152, 1889
BstDEI CTNAG 8 cut(s) 12, 576, 675, 951, 1044, 1195, 1572, 1975
BstDSI CCRYGG 1 cut(s) 1617
BstF5I GGATG 8 cut(s) 251, 281, 727, 948, 1300, 1501, 1900, 1984
BstFNI CGCG 1 cut(s) 563
BstH2I RGCGCY 1 cut(s) 627
BstHHI GCGC 2 cut(s) 132, 626
BstKTI GATC 7 cut(s) 118, 646, 1039, 1056, 1239, 1471, 1720
BstMAI GTCTC 2 cut(s) 94, 1984
BstMBI GATC 7 cut(s) 115, 643, 1036, 1053, 1236, 1468, 1717
BstMWI GCNNNNNNNGC 9 cut(s) 129, 149, 257, 401, 410, 522, 572, 1846, 1888
BstNI CCWGG 3 cut(s) 195, 377, 533
BstNSI RCATGY 4 cut(s) 149, 387, 570, 1891
BstSCI CCNGG 5 cut(s) 193, 236, 375, 531, 570
BstSFI CTRYAG 2 cut(s) 357, 1651
BstSLI GKGCMC 3 cut(s) 145, 310, 806
BstUI CGCG 1 cut(s) 563
BstV1I GCAGC 5 cut(s) 161, 700, 1268, 1698, 1836
BstX2I RGATCY 1 cut(s) 1468
BstXI CCANNNNNNTGG 2 cut(s) 288, 1140
BstYI RGATCY 1 cut(s) 1468
Bsu36I CCTNAGG 1 cut(s) 1195
BsuI GTATCC 1 cut(s) 1333
BsuRI GGCC 8 cut(s) 193, 308, 375, 536, 797, 804, 1703, 1882
BtgI CCRYGG 1 cut(s) 1617
BtgZI GCGATG 1 cut(s) 561
BtsCI GGATG 8 cut(s) 251, 281, 727, 948, 1300, 1501, 1900, 1984
BtsI GCAGTG 2 cut(s) 172, 1377
BtsIMutI CAGTG 3 cut(s) 172, 183, 1377
BveI ACCTGC 1 cut(s) 752
Cac8I GCNNGC 7 cut(s) 262, 385, 397, 568, 628, 1152, 1889
CciI TCATGA 1 cut(s) 1438
CfoI GCGC 2 cut(s) 132, 626
Cfr10I RCCGGY 2 cut(s) 264, 521
Cfr13I GGNCC 8 cut(s) 306, 307, 755, 795, 802, 803, 1130, 1937
CseI GACGC 2 cut(s) 338, 1013
Csp6I GTAC 4 cut(s) 670, 1191, 1386, 1859
CviQI GTAC 4 cut(s) 670, 1191, 1386, 1859
DdeI CTNAG 8 cut(s) 12, 576, 675, 951, 1044, 1195, 1572, 1975
DpnI GATC 7 cut(s) 117, 645, 1038, 1055, 1238, 1470, 1719
DpnII GATC 7 cut(s) 115, 643, 1036, 1053, 1236, 1468, 1717
EaeI YGGCCR 2 cut(s) 191, 373
Eam1104I CTCTTC 1 cut(s) 1360
EarI CTCTTC 1 cut(s) 1360
EciI GGCGGA 4 cut(s) 81, 125, 414, 768
Ecl136II GAGCTC 1 cut(s) 404
Eco130I CCWWGG 1 cut(s) 1617
Eco147I AGGCCT 1 cut(s) 536
Eco24I GRGCYC 3 cut(s) 310, 406, 806
Eco47I GGWCC 3 cut(s) 755, 1130, 1937
Eco47III AGCGCT 1 cut(s) 625
Eco53kI GAGCTC 1 cut(s) 404
Eco57I CTGAAG 1 cut(s) 120
Eco72I CACGTG 1 cut(s) 1538
Eco81I CCTNAGG 1 cut(s) 1195
Eco88I CYCGRG 1 cut(s) 1112
EcoICRI GAGCTC 1 cut(s) 404
EcoO109I RGGNCCY 2 cut(s) 802, 803
EcoRII CCWGG 3 cut(s) 193, 375, 531
EcoT14I CCWWGG 1 cut(s) 1617
EcoT22I ATGCAT 1 cut(s) 1747
EcoT38I GRGCYC 3 cut(s) 310, 406, 806
ErhI CCWWGG 1 cut(s) 1617
FaqI GGGAC 3 cut(s) 808, 1016, 1564
FauNDI CATATG 1 cut(s) 784
FblI GTMKAC 1 cut(s) 1650
Fnu4HI GCNGC 8 cut(s) 150, 517, 564, 689, 1282, 1687, 1800, 1850
FokI GGATG 8 cut(s) 238, 268, 734, 955, 1307, 1508, 1907, 1971
FriOI GRGCYC 3 cut(s) 310, 406, 806
Fsp4HI GCNGC 8 cut(s) 150, 517, 564, 689, 1282, 1687, 1800, 1850
FspBI CTAG 6 cut(s) 248, 261, 452, 1151, 1727, 1736
GlaI GCGC 2 cut(s) 131, 625
GluI GCNGC 8 cut(s) 150, 517, 564, 689, 1282, 1687, 1800, 1850
GsuI CTGGAG 2 cut(s) 1590, 1803
HaeII RGCGCY 1 cut(s) 627
HaeIII GGCC 8 cut(s) 193, 308, 375, 536, 797, 804, 1703, 1882
HapII CCGG 6 cut(s) 95, 237, 265, 522, 572, 1892
HgaI GACGC 2 cut(s) 338, 1013
HhaI GCGC 2 cut(s) 132, 626
Hin1I GRCGYC 2 cut(s) 330, 1005
Hin6I GCGC 2 cut(s) 130, 624
HinP1I GCGC 2 cut(s) 130, 624
HincII GTYRAC 3 cut(s) 478, 559, 659
HindII GTYRAC 3 cut(s) 478, 559, 659
HindIII AAGCTT 2 cut(s) 702, 1333
HinfI GANTC 7 cut(s) 17, 47, 441, 1269, 1355, 1442, 1805
HpaI GTTAAC 1 cut(s) 559
HpaII CCGG 6 cut(s) 95, 237, 265, 522, 572, 1892
HphI GGTGA 5 cut(s) 109, 226, 631, 733, 824
Hpy166II GTNNAC 9 cut(s) 143, 478, 559, 639, 659, 1388, 1651, 1859, 1940
Hpy188I TCNGA 8 cut(s) 22, 648, 1045, 1268, 1522, 1575, 1645, 1872
Hpy188III TCNNGA 8 cut(s) 41, 51, 452, 1013, 1219, 1439, 1607, 1820
Hpy8I GTNNAC 9 cut(s) 143, 478, 559, 639, 659, 1388, 1651, 1859, 1940
Hpy99I CGWCG 3 cut(s) 506, 1363, 1876
HpyCH4III ACNGT 5 cut(s) 187, 365, 392, 822, 892
HpyCH4IV ACGT 2 cut(s) 1390, 1537
HpyF10VI GCNNNNNNNGC 9 cut(s) 129, 149, 257, 401, 410, 522, 572, 1846, 1888
HpyF3I CTNAG 8 cut(s) 12, 576, 675, 951, 1044, 1195, 1572, 1975
HpySE526I ACGT 2 cut(s) 1390, 1537
Hsp92I GRCGYC 2 cut(s) 330, 1005
HspAI GCGC 2 cut(s) 130, 624
KspAI GTTAAC 1 cut(s) 559
Kzo9I GATC 7 cut(s) 115, 643, 1036, 1053, 1236, 1468, 1717
LguI GCTCTTC 1 cut(s) 1360
LmnI GCTCC 6 cut(s) 68, 182, 326, 401, 409, 1822
Lsp1109I GCAGC 5 cut(s) 161, 700, 1268, 1698, 1836
LweI GCATC 4 cut(s) 260, 308, 538, 715
MaeI CTAG 6 cut(s) 248, 261, 452, 1151, 1727, 1736
MaeII ACGT 2 cut(s) 1390, 1537
MaeIII GTNAC 4 cut(s) 3, 579, 1047, 1302
MalI GATC 7 cut(s) 117, 645, 1038, 1055, 1238, 1470, 1719
MboI GATC 7 cut(s) 115, 643, 1036, 1053, 1236, 1468, 1717
MboII GAAGA 4 cut(s) 66, 125, 1377, 1705
MflI RGATCY 1 cut(s) 1468
MhlI GDGCHC 4 cut(s) 145, 310, 406, 806
MlsI TGGCCA 2 cut(s) 193, 375
MluNI TGGCCA 2 cut(s) 193, 375
MmeI TCCRAC 3 cut(s) 316, 1273, 1895
Mox20I TGGCCA 2 cut(s) 193, 375
Mph1103I ATGCAT 1 cut(s) 1747
MscI TGGCCA 2 cut(s) 193, 375
MseI TTAA 7 cut(s) 558, 684, 875, 974, 1287, 1395, 2031
MslI CAYNNNNRTG 1 cut(s) 286
Msp20I TGGCCA 2 cut(s) 193, 375
MspI CCGG 6 cut(s) 95, 237, 265, 522, 572, 1892
MspR9I CCNGG 5 cut(s) 195, 238, 377, 533, 572
MvaI CCWGG 3 cut(s) 195, 377, 533
MvnI CGCG 1 cut(s) 563
MwoI GCNNNNNNNGC 9 cut(s) 129, 149, 257, 401, 410, 522, 572, 1846, 1888
NciI CCSGG 2 cut(s) 238, 572
NcoI CCATGG 1 cut(s) 1617
NdeI CATATG 1 cut(s) 784
NdeII GATC 7 cut(s) 115, 643, 1036, 1053, 1236, 1468, 1717
NheI GCTAGC 2 cut(s) 260, 1150
NlaIV GGNNCC 8 cut(s) 199, 308, 520, 804, 805, 919, 1818, 1918
NmeAIII GCCGAG 2 cut(s) 823, 1908
NmuCI GTSAC 1 cut(s) 3
NsiI ATGCAT 1 cut(s) 1747
NspI RCATGY 4 cut(s) 149, 387, 570, 1891
NspV TTCGAA 2 cut(s) 243, 2003
PaeI GCATGC 3 cut(s) 387, 570, 1891
PagI TCATGA 1 cut(s) 1438
PaqCI CACCTGC 1 cut(s) 752
PceI AGGCCT 1 cut(s) 536
PciSI GCTCTTC 1 cut(s) 1360
PcsI WCGNNNNNNNCGW 2 cut(s) 441, 1880
PfeI GAWTC 7 cut(s) 17, 47, 441, 1269, 1355, 1442, 1805
PkrI GCNGC 8 cut(s) 151, 518, 565, 690, 1283, 1688, 1801, 1851
PmaCI CACGTG 1 cut(s) 1538
PmlI CACGTG 1 cut(s) 1538
Ppu21I YACGTR 1 cut(s) 1538
PshBI ATTAAT 1 cut(s) 2031
Psp124BI GAGCTC 1 cut(s) 406
Psp6I CCWGG 3 cut(s) 193, 375, 531
PspCI CACGTG 1 cut(s) 1538
PspGI CCWGG 3 cut(s) 193, 375, 531
PspN4I GGNNCC 8 cut(s) 199, 308, 520, 804, 805, 919, 1818, 1918
PspOMI GGGCCC 2 cut(s) 306, 802
PspPI GGNCC 8 cut(s) 306, 307, 755, 795, 802, 803, 1130, 1937
PstI CTGCAG 1 cut(s) 361
PsuI RGATCY 1 cut(s) 1468
RsaI GTAC 4 cut(s) 671, 1192, 1387, 1860
RsaNI GTAC 4 cut(s) 670, 1191, 1386, 1859
RseI CAYNNNNRTG 1 cut(s) 286
SacI GAGCTC 1 cut(s) 406
SapI GCTCTTC 1 cut(s) 1360
SaqAI TTAA 7 cut(s) 558, 684, 875, 974, 1287, 1395, 2031
SatI GCNGC 8 cut(s) 150, 517, 564, 689, 1282, 1687, 1800, 1850
Sau3AI GATC 7 cut(s) 115, 643, 1036, 1053, 1236, 1468, 1717
Sau96I GGNCC 8 cut(s) 306, 307, 755, 795, 802, 803, 1130, 1937
ScaI AGTACT 1 cut(s) 671
ScrFI CCNGG 5 cut(s) 195, 238, 377, 533, 572
SduI GDGCHC 4 cut(s) 145, 310, 406, 806
SfaNI GCATC 4 cut(s) 260, 308, 538, 715
SfcI CTRYAG 2 cut(s) 357, 1651
SfuI TTCGAA 2 cut(s) 243, 2003
SinI GGWCC 3 cut(s) 755, 1130, 1937
SmiMI CAYNNNNRTG 1 cut(s) 286
SmlI CTYRAG 1 cut(s) 699
SmoI CTYRAG 1 cut(s) 699
SphI GCATGC 3 cut(s) 387, 570, 1891
SseBI AGGCCT 1 cut(s) 536
SsiI CCGC 7 cut(s) 66, 110, 399, 516, 563, 753, 1799
SspI AATATT 2 cut(s) 1399, 1629
SspMI CTAG 6 cut(s) 248, 261, 452, 1151, 1727, 1736
SstI GAGCTC 1 cut(s) 406
StuI AGGCCT 1 cut(s) 536
StyD4I CCNGG 5 cut(s) 193, 236, 375, 531, 570
StyI CCWWGG 1 cut(s) 1617
TaaI ACNGT 5 cut(s) 187, 365, 392, 822, 892
TaiI ACGT 2 cut(s) 1393, 1540
TaqI TCGA 9 cut(s) 118, 243, 444, 539, 790, 1353, 1358, 1720, 2003
TatI WGTACW 2 cut(s) 669, 1858
TauI GCSGC 3 cut(s) 519, 566, 1802
TfiI GAWTC 7 cut(s) 17, 47, 441, 1269, 1355, 1442, 1805
Tru1I TTAA 7 cut(s) 558, 684, 875, 974, 1287, 1395, 2031
Tru9I TTAA 7 cut(s) 558, 684, 875, 974, 1287, 1395, 2031
TscAI CASTG 3 cut(s) 179, 190, 1377
TseFI GTSAC 1 cut(s) 3
TseI GCWGC 5 cut(s) 149, 688, 1281, 1686, 1849
Tsp45I GTSAC 1 cut(s) 3
TspDTI ATGAA 7 cut(s) 1239, 1309, 1520, 1797, 1803, 1844, 2025
TspGWI ACGGA 4 cut(s) 490, 837, 1100, 1889
TspRI CASTG 3 cut(s) 179, 190, 1377
VneI GTGCAC 1 cut(s) 141
VpaK11BI GGWCC 3 cut(s) 755, 1130, 1937
VspI ATTAAT 1 cut(s) 2031
XapI RAATTY 4 cut(s) 58, 340, 1515, 1558
XbaI TCTAGA 1 cut(s) 451
XceI RCATGY 4 cut(s) 149, 387, 570, 1891
XmiI GTMKAC 1 cut(s) 1650
XspI CTAG 6 cut(s) 248, 261, 452, 1151, 1727, 1736
ZrmI AGTACT 1 cut(s) 671
Zsp2I ATGCAT 1 cut(s) 1747
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.