Rroxscaffold_1G00070280

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
91151456 .. 91153723
2268 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00070280.1

Sequence Viewer

Length: 1737 bp
ATGCAACTGGGTAGTGCTACTTTGTTTTTCTTATTCATCTTCAGTTTGCTTCTGTCACTGTATGGCGCTGAAGTATATAACATAACTCCTTCGCACCCATTATCCGAGGGAGAAACTCTAGTCTCTCCTGGTCTAATATTCGAATTGGGCTTCTTCAGTCCTAAGAGTTCTGGTAACAAGTATGTGGGAATATGGCACAAGGACATATTTCCACGAAAAGTAGTATGGGTGGCTAACAGAGATAAGCCTCTTGCTCTTATAGACACCCTGGCTAGTTTGAGAGTTAGCAGCAATGGGAGTCTGGAGCTTGTGGATGGGAAGCAGAATTCTGTTTGGTCAACCAATATTACAATACAGGTTTCATCATCTAATATTAGTTCAGTTGCTGCAGTTCTTTCAGACGATGGAAACTTTGTTGTCACAGATGTTATCAGAGCTGGTGAATCAATATGGCAGAGCTTTCATCATCCTGGTGACACTTTGCTACCAAACATGATGTTGGGATACGATATTAAAAATGGAAAAAGCCGTTTCTTAACTGCCTGGAAAAGTGAGAGTGATCCATCTGGTGGGATATATACAATTGCACTCGGACGACGAACAGATAGGCCAGCACAAATGATTGTTTGGATTAATGGATCAATTCCCTTCAGGAGAACTGGGCCATGGGATAAATCAAAATTCATTGGCATCCCAGATATGGATTATCGATATCTTAGTGGATTTAAACTAGATGAAAATGCGGAAGAGGGAACAAAGTATTTCTCATTTAACTTACCAGAGAAAACTCTCGCATATGTAGACCTCTCTTCACAGGGAAAGATAAAGCATATGAGGTCAGAAAATGGTAGGAATTGGTCACTCAAGTACGAGTCACAACAGAATCCATGTAACATCTATGGAGCATGTGGGGCTTATGGGGTTTGCAGCGTTTCTAGATCTCCAATCTGCAAATGTTTGAAAGGGTTTGTACCAAAGTCAGACCATGAATGGAGCAAAGGAGACTGGACCGGTGGGTGTGTAAGAAAAACCGAATTGTTCTGTGAGAGACAAACAAATAAGAAGTCAGTGCCATTGCAAGGTAAAAAAGATGATAATGATGATGGGTTTTGGAAGATCATACGGGCGAAAGTACCAGATTATTATCAGTATATTACATCTTTGAATCTTGAAGACAACTTCAATGACTGCAAGTTACAGTGCCTAAATAATTGTGAAGGAAAGCCAATTAAGTTGATTGCCTGCCTTACAGCTATTGGTTTAATTATTATCTTGGTTGCCATAGTGTTCGGTTTGCACAGGTTGCGAGCTAACCAAAAGGAATCAACTCCAACTTCTAGGGACACTCTTCGAGAATATATTGGAAAACATGATCCATCAGAGCTATTGATCTATGATTTTGATACCATATTAACTGCTACAGACAATTTCAGCATTACAAACAAACTCGGGCAAGGAGGCTTTGGTCCTGTTTACAAGGGTATACTACAAGATGGGAAGGAAATAGCTGTAAAAAGACTATCTAGTAGCTCAGGACAAGGCATTGAAGAGTTCAAGAATGAGATGTTGTTGATCTCCAATCTTCAACACAAAAATCTTGTAAGGATGATGGGTTGCTGCGTTAAAGAGGATGAGAAGTTACTTGTTTATGAATTCATGCCAAACAAAAGCTTGGATACGTTTCTATTTGGTAAGTTTCACTTATTGCCACTTTATGATGGCTGCAGTTTCTCATAG

Protein Analysis

578

Amino Acids

64.76

Weight (kDa)

8.23

Isoelectric Point (pI)

33.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 74 - 183 2.3e-29 D-mannose binding lectin
S_locus_glycop PF00954 219 - 327 2.3e-27 S-locus glycoprotein domain
Pkinase PF00069 478 - 562 2.1e-13 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 479 - 563 6.7e-17 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 569
AccI GTMKAC 2 cut(s) 801, 1483
AciI CCGC 1 cut(s) 743
AclWI GGATC 3 cut(s) 554, 646, 1367
AcsI RAATTY 3 cut(s) 325, 680, 1652
AcuI CTGAAG 4 cut(s) 25, 90, 139, 634
AfaI GTAC 3 cut(s) 869, 972, 1134
AfiI CCNNNNNNNGG 3 cut(s) 569, 700, 1079
AgeI ACCGGT 1 cut(s) 1010
AgsI TTSAA 7 cut(s) 961, 1165, 1172, 1183, 1547, 1555, 1586
AjnI CCWGG 4 cut(s) 127, 267, 469, 542
AluBI AGCT 9 cut(s) 307, 437, 459, 1253, 1310, 1384, 1508, 1530, 1671
AluI AGCT 9 cut(s) 307, 437, 459, 1253, 1310, 1384, 1508, 1530, 1671
Alw26I GTCTC 3 cut(s) 127, 996, 1042
AlwI GGATC 3 cut(s) 554, 646, 1367
AlwNI CAGNNNCTG 1 cut(s) 386
Ama87I CYCGRG 1 cut(s) 1448
AoxI GGCC 2 cut(s) 608, 662
ApeKI GCWGC 5 cut(s) 288, 386, 927, 1617, 1722
ApoI RAATTY 3 cut(s) 325, 680, 1652
ArsI GACNNNNNNTTYG 2 cut(s) 1049, 1081
AseI ATTAAT 1 cut(s) 633
AsiGI ACCGGT 1 cut(s) 1010
AspLEI GCGC 1 cut(s) 68
AspS9I GGNCC 3 cut(s) 662, 1008, 1466
AsuHPI GGTGA 2 cut(s) 452, 485
AsuII TTCGAA 1 cut(s) 141
AvaI CYCGRG 1 cut(s) 1448
AvaII GGWCC 2 cut(s) 1008, 1466
BbsI GAAGAC 1 cut(s) 1179
BbvI GCAGC 5 cut(s) 300, 373, 939, 1604, 1709
BccI CCATC 8 cut(s) 308, 398, 571, 1097, 1384, 1487, 1603, 1712
BceAI ACGGC 1 cut(s) 513
BciT130I CCWGG 4 cut(s) 129, 269, 471, 544
BciVI GTATCC 2 cut(s) 497, 1669
BcoDI GTCTC 3 cut(s) 127, 996, 1042
BfaI CTAG 6 cut(s) 119, 273, 731, 936, 1338, 1524
BfmI CTRYAG 3 cut(s) 387, 1419, 1723
BfoI RGCGCY 1 cut(s) 69
BfuI GTATCC 2 cut(s) 497, 1669
BglII AGATCT 1 cut(s) 938
BisI GCNGC 5 cut(s) 289, 387, 928, 1618, 1723
BlsI GCNGC 5 cut(s) 290, 388, 929, 1619, 1724
Bme1390I CCNGG 4 cut(s) 129, 269, 471, 544
Bme18I GGWCC 2 cut(s) 1008, 1466
BmeT110I CYCGRG 1 cut(s) 1448
BmgT120I GGNCC 3 cut(s) 662, 1008, 1466
BmrFI CCNGG 4 cut(s) 129, 269, 471, 544
BmrI ACTGGG 2 cut(s) 17, 669
BmsI GCATC 1 cut(s) 699
BmuI ACTGGG 2 cut(s) 17, 669
BpiI GAAGAC 1 cut(s) 1179
BpmI CTGGAG 1 cut(s) 323
Bpu10I CCTNAGC 1 cut(s) 1531
Bpu14I TTCGAA 1 cut(s) 141
BpuEI CTTGAG 1 cut(s) 848
Bsa29I ATCGAT 1 cut(s) 709
BsaBI GATNNNNATC 1 cut(s) 1143
BsaJI CCNNGG 3 cut(s) 105, 267, 665
BsaWI WCCGGW 1 cut(s) 1010
Bsc4I CCNNNNNNNGG 3 cut(s) 569, 700, 1079
Bse118I RCCGGY 1 cut(s) 1010
Bse1I ACTGG 3 cut(s) 12, 664, 1010
Bse3DI GCAATG 2 cut(s) 298, 1073
Bse8I GATNNNNATC 1 cut(s) 1143
BseBI CCWGG 4 cut(s) 129, 269, 471, 544
BseCI ATCGAT 1 cut(s) 709
BseDI CCNNGG 3 cut(s) 105, 267, 665
BseGI GGATG 5 cut(s) 319, 466, 690, 1611, 1636
BseJI GATNNNNATC 1 cut(s) 1143
BseLI CCNNNNNNNGG 3 cut(s) 569, 700, 1079
BseMI GCAATG 2 cut(s) 298, 1073
BseMII CTCAG 1 cut(s) 1545
BseNI ACTGG 3 cut(s) 12, 664, 1010
BseXI GCAGC 5 cut(s) 300, 373, 939, 1604, 1709
BshFI GGCC 2 cut(s) 610, 664
BshTI ACCGGT 1 cut(s) 1010
BshVI ATCGAT 1 cut(s) 709
BsiHKCI CYCGRG 1 cut(s) 1448
BsiSI CCGG 1 cut(s) 1011
BslFI GGGAC 1 cut(s) 1355
BslI CCNNNNNNNGG 3 cut(s) 569, 700, 1079
BsmAI GTCTC 3 cut(s) 127, 996, 1042
BsmFI GGGAC 1 cut(s) 1355
BsnI GGCC 2 cut(s) 610, 664
BsoBI CYCGRG 1 cut(s) 1448
Bsp119I TTCGAA 1 cut(s) 141
Bsp143I GATC 7 cut(s) 559, 638, 938, 1116, 1372, 1389, 1572
Bsp19I CCATGG 1 cut(s) 665
BspACI CCGC 1 cut(s) 743
BspANI GGCC 2 cut(s) 610, 664
BspCNI CTCAG 1 cut(s) 1544
BspDI ATCGAT 1 cut(s) 709
BspMAI CTGCAG 2 cut(s) 391, 1727
BspPI GGATC 3 cut(s) 554, 646, 1367
BspT104I TTCGAA 1 cut(s) 141
BsrDI GCAATG 2 cut(s) 298, 1073
BsrFI RCCGGY 1 cut(s) 1010
BsrI ACTGG 3 cut(s) 12, 664, 1010
BssAI RCCGGY 1 cut(s) 1010
BssECI CCNNGG 3 cut(s) 105, 267, 665
BssMI GATC 7 cut(s) 559, 638, 938, 1116, 1372, 1389, 1572
BssNAI GTATAC 1 cut(s) 1484
BssT1I CCWWGG 1 cut(s) 665
Bst1107I GTATAC 1 cut(s) 1484
Bst2UI CCWGG 4 cut(s) 129, 269, 471, 544
Bst4CI ACNGT 2 cut(s) 60, 1200
Bst6I CTCTTC 4 cut(s) 741, 814, 1353, 1542
BstAPI GCANNNNNTGC 1 cut(s) 1303
BstBI TTCGAA 1 cut(s) 141
BstC8I GCNNGC 3 cut(s) 612, 1243, 1308
BstDEI CTNAG 3 cut(s) 162, 716, 1531
BstDSI CCRYGG 1 cut(s) 665
BstF5I GGATG 5 cut(s) 319, 466, 690, 1611, 1636
BstH2I RGCGCY 1 cut(s) 69
BstHHI GCGC 1 cut(s) 68
BstKTI GATC 7 cut(s) 562, 641, 941, 1119, 1375, 1392, 1575
BstMAI GTCTC 3 cut(s) 127, 996, 1042
BstMBI GATC 7 cut(s) 559, 638, 938, 1116, 1372, 1389, 1572
BstMWI GCNNNNNNNGC 2 cut(s) 911, 1303
BstNI CCWGG 4 cut(s) 129, 269, 471, 544
BstNSI RCATGY 1 cut(s) 909
BstSCI CCNGG 4 cut(s) 127, 267, 469, 542
BstSFI CTRYAG 3 cut(s) 387, 1419, 1723
BstV1I GCAGC 5 cut(s) 300, 373, 939, 1604, 1709
BstV2I GAAGAC 1 cut(s) 1179
BstX2I RGATCY 1 cut(s) 938
BstYI RGATCY 1 cut(s) 938
BstZ17I GTATAC 1 cut(s) 1484
Bsu15I ATCGAT 1 cut(s) 709
BsuI GTATCC 2 cut(s) 497, 1669
BsuRI GGCC 2 cut(s) 610, 664
BsuTUI ATCGAT 1 cut(s) 709
BtgI CCRYGG 1 cut(s) 665
BtsCI GGATG 5 cut(s) 319, 466, 690, 1611, 1636
BtsIMutI CAGTG 3 cut(s) 56, 1074, 1205
Cac8I GCNNGC 3 cut(s) 612, 1243, 1308
CaiI CAGNNNCTG 1 cut(s) 386
CfoI GCGC 1 cut(s) 68
Cfr10I RCCGGY 1 cut(s) 1010
Cfr13I GGNCC 3 cut(s) 662, 1008, 1466
ClaI ATCGAT 1 cut(s) 709
Csp6I GTAC 3 cut(s) 868, 971, 1133
CspAI ACCGGT 1 cut(s) 1010
CviAII CATG 7 cut(s) 493, 666, 888, 906, 986, 1370, 1657
CviQI GTAC 3 cut(s) 868, 971, 1133
DdeI CTNAG 3 cut(s) 162, 716, 1531
DpnI GATC 7 cut(s) 561, 640, 940, 1118, 1374, 1391, 1574
DpnII GATC 7 cut(s) 559, 638, 938, 1116, 1372, 1389, 1572
DraI TTTAAA 1 cut(s) 727
Eam1104I CTCTTC 4 cut(s) 741, 814, 1353, 1542
EarI CTCTTC 4 cut(s) 741, 814, 1353, 1542
Eco130I CCWWGG 1 cut(s) 665
Eco32I GATATC 1 cut(s) 713
Eco47I GGWCC 2 cut(s) 1008, 1466
Eco57I CTGAAG 4 cut(s) 25, 90, 139, 634
Eco88I CYCGRG 1 cut(s) 1448
EcoRI GAATTC 2 cut(s) 325, 1652
EcoRII CCWGG 4 cut(s) 127, 267, 469, 542
EcoRV GATATC 1 cut(s) 713
EcoT14I CCWWGG 1 cut(s) 665
ErhI CCWWGG 1 cut(s) 665
FaeI CATG 7 cut(s) 496, 669, 891, 909, 989, 1373, 1660
FalI AAGNNNNNCTT 2 cut(s) 1685, 1717
FaqI GGGAC 1 cut(s) 1355
FatI CATG 7 cut(s) 492, 665, 887, 905, 985, 1369, 1656
FauNDI CATATG 2 cut(s) 796, 831
FblI GTMKAC 2 cut(s) 801, 1483
Fnu4HI GCNGC 5 cut(s) 289, 387, 928, 1618, 1723
FokI GGATG 5 cut(s) 326, 453, 677, 1618, 1643
Fsp4HI GCNGC 5 cut(s) 289, 387, 928, 1618, 1723
FspBI CTAG 6 cut(s) 119, 273, 731, 936, 1338, 1524
GlaI GCGC 1 cut(s) 67
GluI GCNGC 5 cut(s) 289, 387, 928, 1618, 1723
GsuI CTGGAG 1 cut(s) 323
HaeII RGCGCY 1 cut(s) 69
HaeIII GGCC 2 cut(s) 610, 664
HapII CCGG 1 cut(s) 1011
HhaI GCGC 1 cut(s) 68
Hin1II CATG 7 cut(s) 496, 669, 891, 909, 989, 1373, 1660
Hin6I GCGC 1 cut(s) 66
HinP1I GCGC 1 cut(s) 66
HincII GTYRAC 1 cut(s) 339
HindII GTYRAC 1 cut(s) 339
HindIII AAGCTT 1 cut(s) 1669
HinfI GANTC 6 cut(s) 298, 443, 872, 883, 1165, 1322
HpaII CCGG 1 cut(s) 1011
HphI GGTGA 2 cut(s) 452, 485
Hpy166II GTNNAC 4 cut(s) 339, 802, 1474, 1484
Hpy188I TCNGA 7 cut(s) 106, 400, 434, 593, 841, 982, 1381
Hpy188III TCNNGA 7 cut(s) 302, 652, 936, 1169, 1352, 1533, 1555
Hpy8I GTNNAC 4 cut(s) 339, 802, 1474, 1484
Hpy99I CGWCG 1 cut(s) 600
HpyAV CCTTC 4 cut(s) 99, 658, 1211, 1492
HpyCH4III ACNGT 2 cut(s) 60, 1200
HpyCH4IV ACGT 1 cut(s) 1679
HpyCH4V TGCA 9 cut(s) 4, 389, 587, 927, 951, 1078, 1191, 1297, 1725
HpyF10VI GCNNNNNNNGC 2 cut(s) 911, 1303
HpyF3I CTNAG 3 cut(s) 162, 716, 1531
HpySE526I ACGT 1 cut(s) 1679
Hsp92II CATG 7 cut(s) 496, 669, 891, 909, 989, 1373, 1660
HspAI GCGC 1 cut(s) 66
Kzo9I GATC 7 cut(s) 559, 638, 938, 1116, 1372, 1389, 1572
LmnI GCTCC 3 cut(s) 304, 902, 993
Lsp1109I GCAGC 5 cut(s) 300, 373, 939, 1604, 1709
LweI GCATC 1 cut(s) 699
MaeI CTAG 6 cut(s) 119, 273, 731, 936, 1338, 1524
MaeII ACGT 1 cut(s) 1679
MaeIII GTNAC 9 cut(s) 54, 173, 418, 473, 858, 873, 890, 1194, 1638
MalI GATC 7 cut(s) 561, 640, 940, 1118, 1374, 1391, 1574
MboI GATC 7 cut(s) 559, 638, 938, 1116, 1372, 1389, 1572
MboII GAAGA 9 cut(s) 31, 145, 758, 801, 1126, 1184, 1340, 1559, 1574
MfeI CAATTG 1 cut(s) 582
MflI RGATCY 1 cut(s) 938
MlyI GAGTC 2 cut(s) 307, 881
MmeI TCCRAC 1 cut(s) 1355
MnlI CCTC 7 cut(s) 100, 258, 742, 815, 828, 1451, 1621
MseI TTAA 9 cut(s) 513, 536, 633, 726, 771, 1230, 1262, 1412, 1623
MslI CAYNNNNRTG 1 cut(s) 471
MspI CCGG 1 cut(s) 1011
MspR9I CCNGG 4 cut(s) 129, 269, 471, 544
MunI CAATTG 1 cut(s) 582
MvaI CCWGG 4 cut(s) 129, 269, 471, 544
MwoI GCNNNNNNNGC 2 cut(s) 911, 1303
NcoI CCATGG 1 cut(s) 665
NdeI CATATG 2 cut(s) 796, 831
NdeII GATC 7 cut(s) 559, 638, 938, 1116, 1372, 1389, 1572
NlaIII CATG 7 cut(s) 496, 669, 891, 909, 989, 1373, 1660
NmuCI GTSAC 5 cut(s) 54, 418, 473, 858, 873
NspI RCATGY 1 cut(s) 909
NspV TTCGAA 1 cut(s) 141
PfeI GAWTC 4 cut(s) 443, 883, 1165, 1322
PflMI CCANNNNNTGG 1 cut(s) 569
PinAI ACCGGT 1 cut(s) 1010
PkrI GCNGC 5 cut(s) 290, 388, 929, 1619, 1724
PleI GAGTC 2 cut(s) 306, 880
PpsI GAGTC 2 cut(s) 306, 880
PshBI ATTAAT 1 cut(s) 633
Psp6I CCWGG 4 cut(s) 127, 267, 469, 542
PspGI CCWGG 4 cut(s) 127, 267, 469, 542
PspPI GGNCC 3 cut(s) 662, 1008, 1466
PstI CTGCAG 2 cut(s) 391, 1727
PstNI CAGNNNCTG 1 cut(s) 386
PsuI RGATCY 1 cut(s) 938
RsaI GTAC 3 cut(s) 869, 972, 1134
RsaNI GTAC 3 cut(s) 868, 971, 1133
RseI CAYNNNNRTG 1 cut(s) 471
SaqAI TTAA 9 cut(s) 513, 536, 633, 726, 771, 1230, 1262, 1412, 1623
SatI GCNGC 5 cut(s) 289, 387, 928, 1618, 1723
Sau3AI GATC 7 cut(s) 559, 638, 938, 1116, 1372, 1389, 1572
Sau96I GGNCC 3 cut(s) 662, 1008, 1466
SchI GAGTC 2 cut(s) 307, 881
ScrFI CCNGG 4 cut(s) 129, 269, 471, 544
SfaNI GCATC 1 cut(s) 699
SfcI CTRYAG 3 cut(s) 387, 1419, 1723
SfuI TTCGAA 1 cut(s) 141
SinI GGWCC 2 cut(s) 1008, 1466
SmiMI CAYNNNNRTG 1 cut(s) 471
SmlI CTYRAG 1 cut(s) 863
SmoI CTYRAG 1 cut(s) 863
SsiI CCGC 1 cut(s) 743
SspI AATATT 3 cut(s) 138, 346, 373
SspMI CTAG 6 cut(s) 119, 273, 731, 936, 1338, 1524
StyD4I CCNGG 4 cut(s) 127, 267, 469, 542
StyI CCWWGG 1 cut(s) 665
TaaI ACNGT 2 cut(s) 60, 1200
TaiI ACGT 1 cut(s) 1682
TaqI TCGA 3 cut(s) 141, 709, 1351
TfiI GAWTC 4 cut(s) 443, 883, 1165, 1322
Tru1I TTAA 9 cut(s) 513, 536, 633, 726, 771, 1230, 1262, 1412, 1623
Tru9I TTAA 9 cut(s) 513, 536, 633, 726, 771, 1230, 1262, 1412, 1623
TscAI CASTG 3 cut(s) 63, 1074, 1205
TseFI GTSAC 5 cut(s) 54, 418, 473, 858, 873
TseI GCWGC 5 cut(s) 288, 386, 927, 1617, 1722
Tsp45I GTSAC 5 cut(s) 54, 418, 473, 858, 873
TspDTI ATGAA 8 cut(s) 25, 351, 452, 673, 750, 1002, 1645, 1665
TspRI CASTG 3 cut(s) 63, 1074, 1205
Van91I CCANNNNNTGG 1 cut(s) 569
VpaK11BI GGWCC 2 cut(s) 1008, 1466
VspI ATTAAT 1 cut(s) 633
XapI RAATTY 3 cut(s) 325, 680, 1652
XbaI TCTAGA 1 cut(s) 935
XceI RCATGY 1 cut(s) 909
XmiI GTMKAC 2 cut(s) 801, 1483
XspI CTAG 6 cut(s) 119, 273, 731, 936, 1338, 1524
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.