Rroxscaffold_7G00208730

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000033
Physical Location & Seq
Reverse (-)
58840060 .. 58844606
4547 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00208730.1

Sequence Viewer

Length: 1971 bp
ATGGGCGGTTGTGAGGGCAATGTTAGAATTTCACTTTCTTCCATAATCCTCCAAGAGTTTGAATTAGGCTTCTTCATTCCTAATAATTCTGGGAATCAATATGTGGGTATCTGGTATAAGGAAATTTCTCCTAGAAAGCCTGTATGGGTGGCCAACAGAGAGAATCCGGTTACAGTTTTAGATCCTCCAGCTAGTCTAATTATCAGCAGCGATGGAAATCTGGAGCTTGTAGATGGAAAGCAACGGTCTATCTGGTCAACCAATATAAGTGGAGTAACATCAGCATCAGCATCAAATAGTAATATTACCACCGTTGTTGTCCTCTCCGACAATGGAAACTTGATTCTCAAATATGGCCTGTCAGGGGAACCTTTATGGCAGAGTTTTCATTATCCTGGTGATACTTTCCTACCACCCAATACAGCACTCGGGTTCAATGCTAAAACCGGAGAGAGACATGTCTTGACTTGCTGGGCAAATAACAGTGATCCATCCCCAGGAAAATTTGTTGCTGAAATTGCGCCACAGAGGCCACCAGAAGCAGTCACTTGGAAATTAGATTCAAGTTCAACTCCATACTGGAGAAGTGGACCATGGGATGGATTAAAGTTCATTGGGATACCTGACATGGATTCAGACTTTCAGCATATGTTCAGGCTTGAAGAAGATATAGAGAAAGGAACTGCATATTTCTCTTTTAATACATACAACAGCTCCACTGCAAATCTGGTGATTTCACCTGAAGGCGTTCTACAGCTAATCTTTAAGGAAGAAGGCGAAGATTGGTATGTAGGTTGGGAGGCTCCGAATAGTACCTGTGATAATTATGGGGTGTGTGGTCCTTTTGCGGTTTGCAAAAATGATGGAAACTTAATTTTTGGTGATAACAAGACGCGGAAAATCATCTACGGTGTTGTAGTTGTTTCTGTCGTTACCATTTGTGGAGCCATCTTAGTTTTCATTTTCCATAAGCGCACAGCTAATGAAAGGGGAAACATGAAAGATGCAAAGGAGCACTTAGATTCGATGGGGACAGTTAATACTTCAAGAGACACTCTTCACTGTGTAGACGAAAACGATCCATCTGATCTACCTCTGTTGGACTTCGATAGCATATCAATTGCCACAAACTTCTTCAACCCAGCAAACAAACTTGGGCAAGGAGGATTTGGTCCTGTGTATAAGGGAAAGCTACAAGATGGAAGGGACATAGCAGTCAAAAGACTATCTAGTAGCTCAGGGCAAGGGATTGAAGAGTTTAAGAATGAGATTATTTTGATCTCTAAACTCCGACACAGAAATCTTGTTAGGCTCATCGGTTATTGCATTGACAGAGAAGAGAGATTGCTAATATATGAGTTCTTGCAGAACAAAAGTTTGGACACTTTTCTATTTGATGAATTAAGAAGAGCAGAGCTTACTTGGGAGAGACGCTTCAACATTATTCAAGGCATTGCCAGAGGACTTCTATATCTCCACCGTGATTCAAATTTAAGGGTAATACACAGGGATTTGAAGGTCAGCAATATTCTCTTGGACGAGAAGATGAACCCAAAAATCTCAGATTTTGGATTGGCAAGGATGTTTCAGGGGACGCTAGAACTAGCAAGTACTCACAGACTAGTGGGAACACTCGGCTATATGTCTCCAGAGTATGCCATGGCTGGAAAATTTTCTGTAAAATCTGATGTCTTTAGCTTTGGTGTCTTGTTATTGGAGATAGTCAGCGGCAGGAAGAACACCAGCTTCCATGATTGTGATCAACCAATAAGCCTTGTTGCCTATGATCTTGCCATGGATAGGCCAACAACACCGGATTTAGTTTCCATGCTTATTAGTGAAACAGTTCGTCCACAGCCCAAACAACCTGTATTTACTTTTCAAAGCTCGTTACAATGTGATCTACAGACACAAAGAGACAATGTATGCTCCCTAAACGAAGCAAGCATCACAGTACTCCAAGGGAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

656

Amino Acids

73.21

Weight (kDa)

5.47

Isoelectric Point (pI)

42.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 48 - 158 2.8e-26 D-mannose binding lectin
S_locus_glycop PF00954 194 - 288 2.1e-21 S-locus glycoprotein domain
Pkinase PF00069 382 - 582 7.4e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 383 - 622 7.4e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1214
AccB7I CCANNNNNTGG 1 cut(s) 599
AccI GTMKAC 1 cut(s) 1068
AccII CGCG 1 cut(s) 895
AciI CCGC 4 cut(s) 6, 848, 895, 1728
AclWI GGATC 3 cut(s) 176, 482, 1073
AcoI YGGCCR 1 cut(s) 150
AcsI RAATTY 5 cut(s) 27, 123, 503, 1489, 1670
AcuI CTGAAG 1 cut(s) 762
AfaI GTAC 3 cut(s) 814, 1612, 1956
AfiI CCNNNNNNNGG 4 cut(s) 364, 497, 599, 1800
AflIII ACRYGT 1 cut(s) 457
AhlI ACTAGT 1 cut(s) 1621
AjnI CCWGG 2 cut(s) 394, 496
AjuI GAANNNNNNNTTGG 2 cut(s) 1361, 1393
Alw21I GWGCWC 1 cut(s) 1017
Alw26I GTCTC 5 cut(s) 448, 1044, 1423, 1650, 1911
AlwI GGATC 3 cut(s) 176, 482, 1073
Ama87I CYCGRG 1 cut(s) 428
AoxI GGCC 4 cut(s) 150, 355, 530, 1802
ApeKI GCWGC 1 cut(s) 207
ApoI RAATTY 5 cut(s) 27, 123, 503, 1489, 1670
Asp700I GAANNNNTTC 3 cut(s) 747, 1672, 1845
AspLEI GCGC 2 cut(s) 523, 975
AspS9I GGNCC 3 cut(s) 590, 839, 1172
AsuHPI GGTGA 4 cut(s) 410, 729, 742, 893
AvaI CYCGRG 1 cut(s) 428
AvaII GGWCC 3 cut(s) 590, 839, 1172
BalI TGGCCA 1 cut(s) 152
BarI GAAGNNNNNNTAC 2 cut(s) 735, 767
Bbv12I GWGCWC 1 cut(s) 1017
BbvI GCAGC 1 cut(s) 219
BccI CCATC 9 cut(s) 206, 227, 499, 593, 857, 956, 1021, 1090, 1193
BciT130I CCWGG 2 cut(s) 396, 498
BciVI GTATCC 1 cut(s) 612
BclI TGATCA 1 cut(s) 1759
BcoDI GTCTC 5 cut(s) 448, 1044, 1423, 1650, 1911
BcuI ACTAGT 1 cut(s) 1621
BfaI CTAG 6 cut(s) 132, 192, 1230, 1598, 1604, 1622
BfmI CTRYAG 2 cut(s) 752, 1904
BfuI GTATCC 1 cut(s) 612
BglI GCCNNNNNGGC 1 cut(s) 529
BisI GCNGC 2 cut(s) 208, 1729
BlsI GCNGC 2 cut(s) 209, 1730
BmcAI AGTACT 2 cut(s) 1612, 1956
Bme1390I CCNGG 2 cut(s) 396, 498
Bme18I GGWCC 3 cut(s) 590, 839, 1172
BmeT110I CYCGRG 1 cut(s) 428
BmgT120I GGNCC 3 cut(s) 590, 839, 1172
BmiI GGNNCC 3 cut(s) 369, 804, 946
BmrFI CCNGG 2 cut(s) 396, 498
BmsI GCATC 4 cut(s) 293, 299, 994, 1956
BpmI CTGGAG 4 cut(s) 171, 242, 601, 1632
Bpu10I CCTNAGC 1 cut(s) 1237
BsaBI GATNNNNATC 2 cut(s) 216, 1758
BsaJI CCNNGG 5 cut(s) 496, 593, 1659, 1794, 1960
BsaWI WCCGGW 3 cut(s) 166, 446, 1813
BsaXI ACNNNNNCTCC 2 cut(s) 698, 728
Bsc4I CCNNNNNNNGG 4 cut(s) 364, 497, 599, 1800
Bse1I ACTGG 1 cut(s) 584
Bse3DI GCAATG 2 cut(s) 25, 1452
Bse8I GATNNNNATC 2 cut(s) 216, 1758
BseBI CCWGG 2 cut(s) 396, 498
BseDI CCNNGG 5 cut(s) 496, 593, 1659, 1794, 1960
BseGI GGATG 3 cut(s) 491, 604, 1587
BseJI GATNNNNATC 2 cut(s) 216, 1758
BseLI CCNNNNNNNGG 4 cut(s) 364, 497, 599, 1800
BseMI GCAATG 2 cut(s) 25, 1452
BseMII CTCAG 2 cut(s) 1251, 1575
BseNI ACTGG 1 cut(s) 584
BseXI GCAGC 1 cut(s) 219
BseYI CCCAGC 2 cut(s) 471, 1141
Bsh1236I CGCG 1 cut(s) 895
BshFI GGCC 4 cut(s) 152, 357, 532, 1804
BsiHKAI GWGCWC 1 cut(s) 1017
BsiHKCI CYCGRG 1 cut(s) 428
BsiSI CCGG 3 cut(s) 167, 447, 1814
BslFI GGGAC 3 cut(s) 1045, 1220, 1606
BslI CCNNNNNNNGG 4 cut(s) 364, 497, 599, 1800
BsmAI GTCTC 5 cut(s) 448, 1044, 1423, 1650, 1911
BsmBI CGTCTC 1 cut(s) 1423
BsmFI GGGAC 3 cut(s) 1045, 1220, 1606
BsnI GGCC 4 cut(s) 152, 357, 532, 1804
BsoBI CYCGRG 1 cut(s) 428
Bsp1286I GDGCHC 1 cut(s) 1017
Bsp143I GATC 8 cut(s) 181, 487, 1078, 1087, 1278, 1759, 1786, 1900
Bsp19I CCATGG 3 cut(s) 593, 1659, 1794
BspACI CCGC 4 cut(s) 6, 848, 895, 1728
BspANI GGCC 4 cut(s) 152, 357, 532, 1804
BspCNI CTCAG 2 cut(s) 1250, 1574
BspFNI CGCG 1 cut(s) 895
BspLI GGNNCC 3 cut(s) 369, 804, 946
BspPI GGATC 3 cut(s) 176, 482, 1073
BspQI GCTCTTC 1 cut(s) 1402
BsrDI GCAATG 2 cut(s) 25, 1452
BsrI ACTGG 1 cut(s) 584
BssECI CCNNGG 5 cut(s) 496, 593, 1659, 1794, 1960
BssMI GATC 8 cut(s) 181, 487, 1078, 1087, 1278, 1759, 1786, 1900
BssT1I CCWWGG 4 cut(s) 593, 1659, 1794, 1960
Bst2UI CCWGG 2 cut(s) 396, 498
Bst6I CTCTTC 4 cut(s) 1062, 1248, 1332, 1402
BstC8I GCNNGC 1 cut(s) 1945
BstDEI CTNAG 4 cut(s) 952, 1018, 1237, 1561
BstDSI CCRYGG 3 cut(s) 593, 1659, 1794
BstF5I GGATG 3 cut(s) 491, 604, 1587
BstFNI CGCG 1 cut(s) 895
BstHHI GCGC 2 cut(s) 523, 975
BstKTI GATC 8 cut(s) 184, 490, 1081, 1090, 1281, 1762, 1789, 1903
BstMAI GTCTC 5 cut(s) 448, 1044, 1423, 1650, 1911
BstMBI GATC 8 cut(s) 181, 487, 1078, 1087, 1278, 1759, 1786, 1900
BstMWI GCNNNNNNNGC 2 cut(s) 518, 529
BstNI CCWGG 2 cut(s) 396, 498
BstNSI RCATGY 1 cut(s) 461
BstSCI CCNGG 2 cut(s) 394, 496
BstSFI CTRYAG 2 cut(s) 752, 1904
BstUI CGCG 1 cut(s) 895
BstV1I GCAGC 1 cut(s) 219
BstX2I RGATCY 1 cut(s) 181
BstYI RGATCY 1 cut(s) 181
BsuI GTATCC 1 cut(s) 612
BsuRI GGCC 4 cut(s) 152, 357, 532, 1804
BtgI CCRYGG 3 cut(s) 593, 1659, 1794
BtgZI GCGATG 1 cut(s) 225
BtsCI GGATG 3 cut(s) 491, 604, 1587
BtsI GCAGTG 1 cut(s) 717
BtsIMutI CAGTG 3 cut(s) 490, 717, 1060
Cac8I GCNNGC 1 cut(s) 1945
CfoI GCGC 2 cut(s) 523, 975
Cfr13I GGNCC 3 cut(s) 590, 839, 1172
CseI GACGC 3 cut(s) 901, 1440, 1603
Csp6I GTAC 3 cut(s) 813, 1611, 1955
CspCI CAANNNNNGTGG 4 cut(s) 250, 285, 298, 333
CviAII CATG 8 cut(s) 458, 594, 628, 997, 1660, 1751, 1795, 1828
CviQI GTAC 3 cut(s) 813, 1611, 1955
DdeI CTNAG 4 cut(s) 952, 1018, 1237, 1561
DpnI GATC 8 cut(s) 183, 489, 1080, 1089, 1280, 1761, 1788, 1902
DpnII GATC 8 cut(s) 181, 487, 1078, 1087, 1278, 1759, 1786, 1900
DrdI GACNNNNNNGTC 1 cut(s) 1214
DseDI GACNNNNNNGTC 1 cut(s) 1214
EaeI YGGCCR 1 cut(s) 150
Eam1104I CTCTTC 4 cut(s) 1062, 1248, 1332, 1402
EarI CTCTTC 4 cut(s) 1062, 1248, 1332, 1402
Eco130I CCWWGG 4 cut(s) 593, 1659, 1794, 1960
Eco47I GGWCC 3 cut(s) 590, 839, 1172
Eco57I CTGAAG 1 cut(s) 762
Eco88I CYCGRG 1 cut(s) 428
EcoRII CCWGG 2 cut(s) 394, 496
EcoT14I CCWWGG 4 cut(s) 593, 1659, 1794, 1960
ErhI CCWWGG 4 cut(s) 593, 1659, 1794, 1960
Esp3I CGTCTC 1 cut(s) 1423
FaeI CATG 8 cut(s) 461, 597, 631, 1000, 1663, 1754, 1798, 1831
FalI AAGNNNNNCTT 2 cut(s) 1001, 1033
FaqI GGGAC 3 cut(s) 1045, 1220, 1606
FatI CATG 8 cut(s) 457, 593, 627, 996, 1659, 1750, 1794, 1827
FauNDI CATATG 1 cut(s) 648
FbaI TGATCA 1 cut(s) 1759
FblI GTMKAC 1 cut(s) 1068
Fnu4HI GCNGC 2 cut(s) 208, 1729
FokI GGATG 3 cut(s) 478, 611, 1594
Fsp4HI GCNGC 2 cut(s) 208, 1729
FspBI CTAG 6 cut(s) 132, 192, 1230, 1598, 1604, 1622
GlaI GCGC 2 cut(s) 522, 974
GluI GCNGC 2 cut(s) 208, 1729
GsaI CCCAGC 2 cut(s) 475, 1145
GsuI CTGGAG 4 cut(s) 171, 242, 601, 1632
HaeIII GGCC 4 cut(s) 152, 357, 532, 1804
HapII CCGG 3 cut(s) 167, 447, 1814
HgaI GACGC 3 cut(s) 901, 1440, 1603
HhaI GCGC 2 cut(s) 523, 975
Hin1II CATG 8 cut(s) 461, 597, 631, 1000, 1663, 1754, 1798, 1831
Hin6I GCGC 2 cut(s) 521, 973
HinP1I GCGC 2 cut(s) 521, 973
HincII GTYRAC 1 cut(s) 258
HindII GTYRAC 1 cut(s) 258
HinfI GANTC 7 cut(s) 94, 163, 343, 560, 632, 1022, 1484
HpaII CCGG 3 cut(s) 167, 447, 1814
HphI GGTGA 4 cut(s) 410, 729, 742, 893
Hpy166II GTNNAC 4 cut(s) 258, 590, 1069, 1853
Hpy188I TCNGA 7 cut(s) 328, 637, 807, 1087, 1292, 1564, 1687
Hpy188III TCNNGA 4 cut(s) 221, 463, 1047, 1649
Hpy8I GTNNAC 4 cut(s) 258, 590, 1069, 1853
HpyAV CCTTC 4 cut(s) 737, 767, 1197, 1510
HpyCH4V TGCA 6 cut(s) 686, 722, 855, 1007, 1326, 1366
HpyF10VI GCNNNNNNNGC 2 cut(s) 518, 529
HpyF3I CTNAG 4 cut(s) 952, 1018, 1237, 1561
Hsp92II CATG 8 cut(s) 461, 597, 631, 1000, 1663, 1754, 1798, 1831
HspAI GCGC 2 cut(s) 521, 973
Ksp22I TGATCA 1 cut(s) 1759
Kzo9I GATC 8 cut(s) 181, 487, 1078, 1087, 1278, 1759, 1786, 1900
LguI GCTCTTC 1 cut(s) 1402
LmnI GCTCC 6 cut(s) 223, 719, 808, 944, 1012, 1934
Lsp1109I GCAGC 1 cut(s) 219
LweI GCATC 4 cut(s) 293, 299, 994, 1956
MaeI CTAG 6 cut(s) 132, 192, 1230, 1598, 1604, 1622
MaeIII GTNAC 5 cut(s) 169, 274, 544, 931, 1890
MalI GATC 8 cut(s) 183, 489, 1080, 1089, 1280, 1761, 1788, 1902
MboI GATC 8 cut(s) 181, 487, 1078, 1087, 1278, 1759, 1786, 1900
MfeI CAATTG 1 cut(s) 1119
MflI RGATCY 1 cut(s) 181
MhlI GDGCHC 1 cut(s) 1017
MlsI TGGCCA 1 cut(s) 152
MluNI TGGCCA 1 cut(s) 152
MmeI TCCRAC 3 cut(s) 351, 1080, 1315
MnlI CCTC 9 cut(s) 7, 59, 195, 332, 522, 793, 1104, 1157, 1454
Mox20I TGGCCA 1 cut(s) 152
MroXI GAANNNNTTC 3 cut(s) 747, 1672, 1845
MscI TGGCCA 1 cut(s) 152
MseI TTAA 8 cut(s) 605, 699, 765, 872, 1038, 1260, 1403, 1493
MslI CAYNNNNRTG 1 cut(s) 1755
Msp20I TGGCCA 1 cut(s) 152
MspA1I CMGCKG 1 cut(s) 1728
MspI CCGG 3 cut(s) 167, 447, 1814
MspR9I CCNGG 2 cut(s) 396, 498
MunI CAATTG 1 cut(s) 1119
MvaI CCWGG 2 cut(s) 396, 498
MvnI CGCG 1 cut(s) 895
MwoI GCNNNNNNNGC 2 cut(s) 518, 529
NcoI CCATGG 3 cut(s) 593, 1659, 1794
NdeI CATATG 1 cut(s) 648
NdeII GATC 8 cut(s) 181, 487, 1078, 1087, 1278, 1759, 1786, 1900
NlaIII CATG 8 cut(s) 461, 597, 631, 1000, 1663, 1754, 1798, 1831
NlaIV GGNNCC 3 cut(s) 369, 804, 946
NmeAIII GCCGAG 1 cut(s) 1614
NmuCI GTSAC 1 cut(s) 544
NspI RCATGY 1 cut(s) 461
PciI ACATGT 1 cut(s) 457
PciSI GCTCTTC 1 cut(s) 1402
PdmI GAANNNNTTC 3 cut(s) 747, 1672, 1845
PfeI GAWTC 7 cut(s) 94, 163, 343, 560, 632, 1022, 1484
PflMI CCANNNNNTGG 1 cut(s) 599
PkrI GCNGC 2 cut(s) 209, 1730
PscI ACATGT 1 cut(s) 457
Psp6I CCWGG 2 cut(s) 394, 496
PspFI CCCAGC 2 cut(s) 471, 1141
PspGI CCWGG 2 cut(s) 394, 496
PspN4I GGNNCC 3 cut(s) 369, 804, 946
PspPI GGNCC 3 cut(s) 590, 839, 1172
PsuI RGATCY 1 cut(s) 181
RsaI GTAC 3 cut(s) 814, 1612, 1956
RsaNI GTAC 3 cut(s) 813, 1611, 1955
RseI CAYNNNNRTG 1 cut(s) 1755
SapI GCTCTTC 1 cut(s) 1402
SaqAI TTAA 8 cut(s) 605, 699, 765, 872, 1038, 1260, 1403, 1493
SatI GCNGC 2 cut(s) 208, 1729
Sau3AI GATC 8 cut(s) 181, 487, 1078, 1087, 1278, 1759, 1786, 1900
Sau96I GGNCC 3 cut(s) 590, 839, 1172
ScaI AGTACT 2 cut(s) 1612, 1956
ScrFI CCNGG 2 cut(s) 396, 498
SduI GDGCHC 1 cut(s) 1017
SfaNI GCATC 4 cut(s) 293, 299, 994, 1956
SfcI CTRYAG 2 cut(s) 752, 1904
SinI GGWCC 3 cut(s) 590, 839, 1172
SmiMI CAYNNNNRTG 1 cut(s) 1755
SpeI ACTAGT 1 cut(s) 1621
SsiI CCGC 4 cut(s) 6, 848, 895, 1728
SspI AATATT 2 cut(s) 304, 1528
SspMI CTAG 6 cut(s) 132, 192, 1230, 1598, 1604, 1622
StyD4I CCNGG 2 cut(s) 394, 496
StyI CCWWGG 4 cut(s) 593, 1659, 1794, 1960
TaqI TCGA 2 cut(s) 1025, 1107
TatI WGTACW 2 cut(s) 1610, 1954
TauI GCSGC 1 cut(s) 1731
TfiI GAWTC 7 cut(s) 94, 163, 343, 560, 632, 1022, 1484
Tru1I TTAA 8 cut(s) 605, 699, 765, 872, 1038, 1260, 1403, 1493
Tru9I TTAA 8 cut(s) 605, 699, 765, 872, 1038, 1260, 1403, 1493
TscAI CASTG 3 cut(s) 490, 724, 1067
TseFI GTSAC 1 cut(s) 544
TseI GCWGC 1 cut(s) 207
Tsp45I GTSAC 1 cut(s) 544
TspDTI ATGAA 8 cut(s) 64, 377, 601, 949, 999, 1013, 1413, 1562
TspRI CASTG 3 cut(s) 490, 724, 1067
Van91I CCANNNNNTGG 1 cut(s) 599
VpaK11BI GGWCC 3 cut(s) 590, 839, 1172
XapI RAATTY 5 cut(s) 27, 123, 503, 1489, 1670
XceI RCATGY 1 cut(s) 461
XcmI CCANNNNNNNNNTGG 1 cut(s) 724
XmiI GTMKAC 1 cut(s) 1068
XmnI GAANNNNTTC 3 cut(s) 747, 1672, 1845
XspI CTAG 6 cut(s) 132, 192, 1230, 1598, 1604, 1622
ZrmI AGTACT 2 cut(s) 1612, 1956
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.