Rmu_sc0003301.1_g000009

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003301.1
OG0000033
Physical Location & Seq
Reverse (-)
28639 .. 32608
3970 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003301.1_g000009.1.cds

Sequence Viewer

Length: 2550 bp
atgggcggttgtgagggcaatgttagaatttcactttcttccataatcctgttcttgttcaacttgtttcagtcacataattgctattcaatttataacataactgcaacccaatcactgtcacttggacaaactcttatctcccccagccaagagtttgaattaggcttcttcattcctaataattctgggaatcaatatgtgggtatctggtataaggaaatttctcctagaaagcctgtatgggtggccaacagagagaatccggttacagttttagatcctccagctagtctaataatcagcagcaatggaaatctggagcttgtagatggaaagcaacggtctatctggtcaaccaatataagtggagtaacatcagcatcagcatcagcatcaaatagtaatattaccaccgttgttgtcctctccgacgatggaaacttgattctcaaatatggcctgtcaggggaacctttatggcagagttttcgttatcctggtgatactttcctaccacccaatacaacactcgggttcaatgctaaaaccggagagagacatgtcttgacttgctgggcaaataacggtgatccatccccaggaaaatttgttgctgaaattgcgccacagaggccaccagaagcagtcacttggaaactagattcaagttcaactccatactggagaagtggaccatgggatggattaaagttcattgggatacctgacatggattcagactttcagcatatgttcaggcttgaagaagatatagagaaaggaactgcatatttctcttttaatacatacaacagctccactgccccaattctggtgatttcacctgaaggcgttctaaagctaatctttaaggacgaaggcgaagattggtatgtaggttgggaggctccgaatagtacctgtgataattatggggtgtgtggtccttttgcagtttgcaaaaatgatggaaacttaatttgtgagtgtttgaaagggtttgtgccaaagtcaaaggaggagtggagcaaaaagatctggacaggagggtgcgagaggcgaactaacttatcttcatgtggtaagtcattgagagggaacagagatggattttggaagatggatggtatcaaactcccacatctttatgaatttgtgcagcttgatcaggatgctgaaaattgccacatatggtgtttgaataactgttcttgcttggcatatgcatatgtaaataatatagggtgtttggtctggtccaaaagccttgttgacatccaacagttctcctcgggtggacaacaactttgcctccgtctcgcacattcagaactagttggtgataacaagacgcggaaaatcatctacggtgttgtagctgtttctgtcgttaccatttgtggagccatcttagttttcattttccataagcgcacagctaatgaaaggggaaacatgaaagatgcaaaggagcacttagattcgatggggacagttaatacttcaagagacactcttcactgtgtagacaaaaacgatccatctgatctacctctgttggacttcgatagcatatcaattgccacaaacttcttcaacccagcaaacaaacttgggcaaggaggatttggtcctgtgtataagggaaagctacaagatggaagggacattgcagtcaaaagactatctagtagctcagggcaagggattgaagagtttaagaatgagattattttgatctctaaactccgacacagaaatcttgttaggctcatcggttattgcattgacagagaagagagattgctaatatatgagttcttgcagaacaaaagtttggacacttttctatttgatgaattaagaagagcagagcttacttgggagagacgcttcaacattattcaaggcattgccagaggacttctatatctccaccgtgattcaaatttaagggtaatacacagggatttgaaggtcagcaatattctcttggacgagaagatgaacccaaaaatctcagattttggattggcaaggatgtttcaggggacgctaggactagcaagtactcacagactagtgggaacactcggctatatgtctccggagtatgccatggctggaaaattttctgtaaaatctgatgtctttagctttggtgtcttgttattggagatagtcagcggcaggaagaacaccagcttccatgattgtgatcaaccaataagccttgttgcctatgcatggcaattatggagcgaatgcaggggactagactttatggatgaagtgttggccgactcattttctccatcagaagttctgagatgcattcacgttggtcttctttgtgtacaggatcttgccatggataggccaacaacaccggatttagtttccatgcttattagtgaaacagttcgtccacaacccaaacaacctgtatttacttttcaaagctcgttacaatgtgatctacagacacaaagagacaatgtatgctccctaaacgaagcaagcatcacagtactccaagggagatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

849

Amino Acids

94.87

Weight (kDa)

5.92

Isoelectric Point (pI)

44.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G11280 AT1G61370 AT1G61370 AT1G61380 AT1G61390 AT1G61390 AT1G61400 AT1G61400 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61420 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61430 AT1G61440 AT1G61440 AT1G61440 AT1G61460 AT1G61475 AT1G61480 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61490 AT1G61500 AT1G61500 AT1G61500 AT1G61550
fragaria_vesca FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_1g16211 FvH4_2g05942 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03431 FvH4_3g03432 FvH4_3g03433 FvH4_3g03434 FvH4_3g03450 FvH4_3g03451 FvH4_3g03460 FvH4_3g03461 FvH4_3g03481 FvH4_3g03482 FvH4_3g03501 FvH4_3g03502 FvH4_3g03520 FvH4_3g03521 FvH4_3g03560 FvH4_3g03560 FvH4_3g03581 FvH4_3g03581 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g31930 FvH4_5g32570
malus_domestica MD05G1329700.v1.1 MD05G1329900.v1.1 MD05G1330000.v1.1 MD05G1330100.v1.1 MD05G1330200.v1.1 MD05G1330400.v1.1 MD05G1330600.v1.1 MD05G1330700.v1.1 MD05G1330800.v1.1 MD05G1331000.v1.1 MD05G1331100.v1.1 MD05G1331200.v1.1 MD05G1331300.v1.1 MD05G1331400.v1.1 MD05G1331500.v1.1 MD05G1331600.v1.1 MD05G1331700.v1.1 MD10G1306700.v1.1 MD10G1306800.v1.1 MD10G1306900.v1.1 MD10G1307300.v1.1 MD10G1307500.v1.1 MD17G1248100.v1.1 MD17G1249300.v1.1 MD17G1249500.v1.1 MD17G1249800.v1.1
prunus_persica Prupe.4G032500_v2.0.a1 Prupe.4G032600_v2.0.a1 Prupe.4G032700_v2.0.a1 Prupe.4G032900_v2.0.a1 Prupe.4G033000_v2.0.a1
pyrus_communis pycom05g30280 pycom05g30290 pycom05g30300 pycom05g30310 pycom05g30330 pycom05g30360 pycom05g30380 pycom10g25890 pycom10g25910 pycom17g24930 pycom17g24940 pycom17g25000 pycom17g25060 pycom17g25350
rosa_chinensis RchiOBHm_Chr1g0319071 RchiOBHm_Chr1g0319131 RchiOBHm_Chr1g0319141 RchiOBHm_Chr1g0319161 RchiOBHm_Chr1g0319181 RchiOBHm_Chr1g0319221 RchiOBHm_Chr1g0319231 RchiOBHm_Chr1g0319241 RchiOBHm_Chr1g0319311 RchiOBHm_Chr1g0334421 RchiOBHm_Chr1g0337491 RchiOBHm_Chr1g0337661 RchiOBHm_Chr1g0337691 RchiOBHm_Chr1g0337791 RchiOBHm_Chr1g0352251 RchiOBHm_Chr2g0122431 RchiOBHm_Chr2g0160101 RchiOBHm_Chr3g0485161 RchiOBHm_Chr3g0485171 RchiOBHm_Chr4g0389441 RchiOBHm_Chr4g0389451 RchiOBHm_Chr4g0392601 RchiOBHm_Chr4g0393961 RchiOBHm_Chr4g0393991 RchiOBHm_Chr4g0394071 RchiOBHm_Chr4g0394091 RchiOBHm_Chr4g0394151 RchiOBHm_Chr4g0408281 RchiOBHm_Chr4g0408311 RchiOBHm_Chr4g0416941 RchiOBHm_Chr5g0005231 RchiOBHm_Chr5g0005241 RchiOBHm_Chr5g0005261 RchiOBHm_Chr5g0005291 RchiOBHm_Chr5g0005301 RchiOBHm_Chr5g0005311 RchiOBHm_Chr5g0005321 RchiOBHm_Chr5g0005331 RchiOBHm_Chr5g0005341 RchiOBHm_Chr5g0005351 RchiOBHm_Chr5g0005361 RchiOBHm_Chr5g0005371 RchiOBHm_Chr5g0005381 RchiOBHm_Chr5g0005391 RchiOBHm_Chr5g0005411 RchiOBHm_Chr5g0005421 RchiOBHm_Chr5g0005441 RchiOBHm_Chr5g0005451 RchiOBHm_Chr5g0005471 RchiOBHm_Chr5g0005521 RchiOBHm_Chr5g0005531 RchiOBHm_Chr5g0005541 RchiOBHm_Chr5g0005551 RchiOBHm_Chr5g0005571 RchiOBHm_Chr5g0005581 RchiOBHm_Chr5g0005631 RchiOBHm_Chr7g0211391 RchiOBHm_Chr7g0222041 RchiOBHm_Chr7g0222051 RchiOBHm_Chr7g0222061 RchiOBHm_Chr7g0222071 RchiOBHm_Chr7g0231441
rosa_laevigata RLG00000007941 RLG00000007942 RLG00000007943 RLG00000008271 RLG00000008656 RLG00000009719 RLG00000009722 RLG00000009981 RLG00000014698 RLG00000018673 RLG00000018675 RLG00000021197 RLG00000022560 RLG00000022561 RLG00000022562 RLG00000022563 RLG00000029269 RLG00000029456 RLG00000030495 RLG00000030497 RLG00000030499 RLG00000030501 RLG00000030505 RLG00000031302 RLG00000031304 RLG00000031305 RLG00000031306 RLG00000031308 RLG00000031309 RLG00000031310 RLG00000031313 RLG00000031343 RLG00000031344 RLG00000031386
rosa_multiflora Rmu_co8145070.1_g000001 Rmu_co8220846.1_g000001 Rmu_co8338791.1_g000001 Rmu_co8346441.1_g000001 Rmu_co8405641.1_g000001 Rmu_co8485383.1_g000001 Rmu_co8515907.1_g000001 Rmu_sc0000570.1_g000001 Rmu_sc0000570.1_g000008 Rmu_sc0000570.1_g000019 Rmu_sc0000570.1_g000020 Rmu_sc0000570.1_g000021 Rmu_sc0000942.1_g000001 Rmu_sc0000942.1_g000029 Rmu_sc0001199.1_g000004 Rmu_sc0001199.1_g000005 Rmu_sc0001199.1_g000006 Rmu_sc0001199.1_g000007 Rmu_sc0001199.1_g000008 Rmu_sc0001199.1_g000009 Rmu_sc0001543.1_g000005 Rmu_sc0002023.1_g000008 Rmu_sc0002498.1_g000016 Rmu_sc0002539.1_g000034 Rmu_sc0002772.1_g000013 Rmu_sc0002786.1_g000018 Rmu_sc0003301.1_g000009 Rmu_sc0003338.1_g000007 Rmu_sc0003338.1_g000011 Rmu_sc0003428.1_g000003 Rmu_sc0003574.1_g000001 Rmu_sc0003574.1_g000008 Rmu_sc0003832.1_g000025 Rmu_sc0004149.1_g000004 Rmu_sc0004553.1_g000006 Rmu_sc0004950.1_g000008 Rmu_sc0005072.1_g000017 Rmu_sc0006085.1_g000002 Rmu_sc0006981.1_g000007 Rmu_sc0009469.1_g000003 Rmu_sc0010358.1_g000001 Rmu_sc0014528.1_g000003 Rmu_sc0014528.1_g000005 Rmu_sc0014528.1_g000006 Rmu_sc0018903.1_g000009 Rmu_sc0021494.1_g000001 Rmu_sc0022096.1_g000001 Rmu_sc0025170.1_g000001 Rmu_sc0025170.1_g000002 Rmu_sc0025170.1_g000003 Rmu_sc0025818.1_g000001 Rmu_sc0026277.1_g000001 Rmu_sc0034649.1_g000001 Rmu_sc0036724.1_g000001 Rmu_sc0039163.1_g000001
rosa_roxburghii Rroxscaffold_1G00070200 Rroxscaffold_1G00070210 Rroxscaffold_1G00070260 Rroxscaffold_1G00070270 Rroxscaffold_1G00070280 Rroxscaffold_1G00070290 Rroxscaffold_1G00070300 Rroxscaffold_1G00070320 Rroxscaffold_1G00070340 Rroxscaffold_1G00070350 Rroxscaffold_1G00070360 Rroxscaffold_1G00070370 Rroxscaffold_1G00070380 Rroxscaffold_1G00070390 Rroxscaffold_1G00070410 Rroxscaffold_1G00070420 Rroxscaffold_1G00070440 Rroxscaffold_2G00090040 Rroxscaffold_2G00121670 Rroxscaffold_2G00121720 Rroxscaffold_3G00229310 Rroxscaffold_4G00314020 Rroxscaffold_4G00314180 Rroxscaffold_4G00328590 Rroxscaffold_4G00328600 Rroxscaffold_4G00328610 Rroxscaffold_4G00328630 Rroxscaffold_4G00328660 Rroxscaffold_5G00335450 Rroxscaffold_5G00339060 Rroxscaffold_5G00339150 Rroxscaffold_5G00352800 Rroxscaffold_5G00352850 Rroxscaffold_5G00356810 Rroxscaffold_5G00360770 Rroxscaffold_5G00360790 Rroxscaffold_6G00389560 Rroxscaffold_6G00389570 Rroxscaffold_7G00208730
rosa_rugosa Rorug01G0026700 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0026800 Rorug01G0135800.1 Rorug01G0215700 Rorug01G0215800 Rorug02G0237600 Rorug03G0200000 Rorug03G0201000 Rorug03G0201000 Rorug03G0216500 Rorug03G0216600 Rorug03G0216700 Rorug03G0323200 Rorug03G0323300 Rorug03G0369600.1 Rorug04G0085100 Rorug04G0114900 Rorug04G0114900 Rorug04G0115000 Rorug04G0145500 Rorug04G0416300 Rorug04G0416400 Rorug04G0416500 Rorug04G0416500 Rorug04G0416600 Rorug04G0416700 Rorug04G0416800 Rorug04G0416900 Rorug04G0416900 Rorug05G0144400 Rorug05G0144500 Rorug05G0572000 Rorug05G0572400 Rorug07G0266600
rosa_samantha Rh1BG009800 Rh1BG026600 Rh1BG034900 Rh1BG035000 Rh1BG035100 Rh1BG035700 Rh1BG037200 Rh1BG105100 Rh1BG124400 Rh1BG211400 Rh1CG037700 Rh1CG037800 Rh2CG283600 Rh2CG284000 Rh2CG530500 Rh2DG320800 Rh3AG266400 Rh3DG296100 Rh3DG296200 Rh3DG296300 Rh3DG362500 Rh3DG362700 Rh4BG020700 Rh4BG020900 Rh4BG046500 Rh4BG046600 Rh4BG047300 Rh4BG146800 Rh4BG146900 Rh4BG173900 Rh5AG043300 Rh5AG043800 Rh5AG043900 Rh5AG044100 Rh5AG044200 Rh5CG048900 Rh5CG049100 Rh5CG049300 Rh5CG049400 Rh5CG049600 Rh5CG049800 Rh5CG049900 Rh5CG050000 Rh5CG050100 Rh5CG050200 Rh5CG050400 Rh5CG050500 Rh5CG050600 Rh5CG050700 Rh5CG050800 Rh5CG050900 Rh5CG051000 Rh5CG051100 Rh5CG051200 Rh5CG051300 Rh5CG051600 Rh5CG051800 Rh7BG395400
rosa_wichuraiana Rw0G000430 Rw0G000480 Rw1G003030 Rw1G003070 Rw1G003080 Rw1G003100 Rw1G003110 Rw1G003270 Rw1G012730 Rw1G012760 Rw2G023620 Rw2G045230 Rw3G023770 Rw3G026730 Rw3G028610 Rw4G004000 Rw4G012230 Rw4G014640 Rw4G018320 Rw5G004220 Rw5G004230 Rw5G004240 Rw5G004250 Rw5G004260 Rw5G004270 Rw5G004280 Rw5G004290 Rw5G004300 Rw5G004320 Rw5G004330 Rw5G004340 Rw5G004350 Rw5G004380 Rw5G004400 Rw5G004410 Rw5G004420 Rw5G004430 Rw5G004440 Rw5G004450 Rw5G004460 Rw6G007850 Rw7G034730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 96
AasI GACNNNNNNGTC 1 cut(s) 1676
AccB7I CCANNNNNTGG 1 cut(s) 704
AccI GTMKAC 1 cut(s) 1530
AccII CGCG 1 cut(s) 1357
AccIII TCCGGA 1 cut(s) 2110
AciI CCGC 3 cut(s) 6, 1357, 2190
AclWI GGATC 4 cut(s) 275, 587, 1535, 2373
AcoI YGGCCR 2 cut(s) 249, 2301
AcsI RAATTY 6 cut(s) 27, 222, 608, 1154, 1951, 2132
AcuI CTGAAG 1 cut(s) 870
AfaI GTAC 4 cut(s) 922, 2074, 2361, 2535
AfiI CCNNNNNNNGG 6 cut(s) 469, 602, 704, 835, 2250, 2379
AflIII ACRYGT 1 cut(s) 562
AhlI ACTAGT 2 cut(s) 1336, 2083
AjnI CCWGG 2 cut(s) 499, 601
AjuI GAANNNNNNNTTGG 2 cut(s) 1823, 1855
Alw21I GWGCWC 1 cut(s) 1479
Alw26I GTCTC 6 cut(s) 553, 1325, 1506, 1885, 2112, 2490
AlwI GGATC 4 cut(s) 275, 587, 1535, 2373
Ama87I CYCGRG 2 cut(s) 533, 1294
Aor13HI TCCGGA 1 cut(s) 2110
AoxI GGCC 5 cut(s) 249, 460, 635, 2301, 2381
ApeKI GCWGC 2 cut(s) 306, 1162
ApoI RAATTY 6 cut(s) 27, 222, 608, 1154, 1951, 2132
ArsI GACNNNNNNTTYG 2 cut(s) 1293, 1325
Asp700I GAANNNNTTC 3 cut(s) 855, 2134, 2424
AspLEI GCGC 2 cut(s) 628, 1437
AspS9I GGNCC 4 cut(s) 695, 947, 1260, 1634
AsuHPI GGTGA 5 cut(s) 515, 602, 837, 850, 1355
AvaI CYCGRG 2 cut(s) 533, 1294
AvaII GGWCC 4 cut(s) 695, 947, 1260, 1634
BalI TGGCCA 1 cut(s) 251
BbsI GAAGAC 1 cut(s) 2342
Bbv12I GWGCWC 1 cut(s) 1479
BbvI GCAGC 2 cut(s) 318, 1174
BcgI CGANNNNNNTGC 2 cut(s) 473, 507
BciT130I CCWGG 2 cut(s) 501, 603
BciVI GTATCC 1 cut(s) 717
BclI TGATCA 2 cut(s) 1168, 2221
BcoDI GTCTC 6 cut(s) 553, 1325, 1506, 1885, 2112, 2490
BcuI ACTAGT 2 cut(s) 1336, 2083
BfaI CTAG 9 cut(s) 231, 291, 662, 1337, 1692, 2060, 2066, 2084, 2279
BfmI CTRYAG 1 cut(s) 2483
BfuI GTATCC 1 cut(s) 717
BglI GCCNNNNNGGC 1 cut(s) 634
BglII AGATCT 1 cut(s) 1038
BisI GCNGC 3 cut(s) 307, 1163, 2191
BlsI GCNGC 3 cut(s) 308, 1164, 2192
BmcAI AGTACT 2 cut(s) 2074, 2535
Bme1390I CCNGG 2 cut(s) 501, 603
Bme18I GGWCC 4 cut(s) 695, 947, 1260, 1634
BmeT110I CYCGRG 2 cut(s) 533, 1294
BmgT120I GGNCC 4 cut(s) 695, 947, 1260, 1634
BmiI GGNNCC 3 cut(s) 474, 912, 1408
BmrFI CCNGG 2 cut(s) 501, 603
BmsI GCATC 7 cut(s) 392, 398, 404, 1165, 1456, 2324, 2535
BpiI GAAGAC 1 cut(s) 2342
BpmI CTGGAG 3 cut(s) 270, 341, 706
Bpu10I CCTNAGC 1 cut(s) 1699
BsaBI GATNNNNATC 1 cut(s) 2220
BsaJI CCNNGG 6 cut(s) 601, 698, 1293, 2121, 2373, 2539
BsaWI WCCGGW 4 cut(s) 265, 551, 2110, 2392
BsaXI ACNNNNNCTCC 4 cut(s) 803, 833, 1299, 1329
Bsc4I CCNNNNNNNGG 6 cut(s) 469, 602, 704, 835, 2250, 2379
Bse1I ACTGG 1 cut(s) 689
Bse3DI GCAATG 4 cut(s) 25, 316, 1671, 1914
Bse8I GATNNNNATC 1 cut(s) 2220
BseAI TCCGGA 1 cut(s) 2110
BseBI CCWGG 2 cut(s) 501, 603
BseDI CCNNGG 6 cut(s) 601, 698, 1293, 2121, 2373, 2539
BseGI GGATG 7 cut(s) 596, 709, 1132, 1180, 1278, 2049, 2296
BseJI GATNNNNATC 1 cut(s) 2220
BseLI CCNNNNNNNGG 6 cut(s) 469, 602, 704, 835, 2250, 2379
BseMI GCAATG 4 cut(s) 25, 316, 1671, 1914
BseMII CTCAG 3 cut(s) 1713, 2037, 2321
BseNI ACTGG 1 cut(s) 689
BseRI GAGGAG 2 cut(s) 1037, 1282
BseXI GCAGC 2 cut(s) 318, 1174
BseYI CCCAGC 3 cut(s) 146, 576, 1603
BsgI GTGCAG 1 cut(s) 1181
Bsh1236I CGCG 1 cut(s) 1357
BshFI GGCC 5 cut(s) 251, 462, 637, 2303, 2383
BsiHKAI GWGCWC 1 cut(s) 1479
BsiHKCI CYCGRG 2 cut(s) 533, 1294
BsiSI CCGG 4 cut(s) 266, 552, 2111, 2393
BslFI GGGAC 4 cut(s) 1507, 1682, 2068, 2289
BslI CCNNNNNNNGG 6 cut(s) 469, 602, 704, 835, 2250, 2379
BsmAI GTCTC 6 cut(s) 553, 1325, 1506, 1885, 2112, 2490
BsmBI CGTCTC 2 cut(s) 1325, 1885
BsmFI GGGAC 4 cut(s) 1507, 1682, 2068, 2289
BsmI GAATGC 2 cut(s) 2273, 2337
BsnI GGCC 5 cut(s) 251, 462, 637, 2303, 2383
BsoBI CYCGRG 2 cut(s) 533, 1294
Bsp1286I GDGCHC 1 cut(s) 1479
Bsp13I TCCGGA 1 cut(s) 2110
Bsp1407I TGTACA 1 cut(s) 2359
Bsp19I CCATGG 3 cut(s) 698, 2121, 2373
BspACI CCGC 3 cut(s) 6, 1357, 2190
BspANI GGCC 5 cut(s) 251, 462, 637, 2303, 2383
BspCNI CTCAG 3 cut(s) 1712, 2036, 2322
BspEI TCCGGA 1 cut(s) 2110
BspFNI CGCG 1 cut(s) 1357
BspLI GGNNCC 3 cut(s) 474, 912, 1408
BspPI GGATC 4 cut(s) 275, 587, 1535, 2373
BspQI GCTCTTC 1 cut(s) 1864
BsrDI GCAATG 4 cut(s) 25, 316, 1671, 1914
BsrGI TGTACA 1 cut(s) 2359
BsrI ACTGG 1 cut(s) 689
BssECI CCNNGG 6 cut(s) 601, 698, 1293, 2121, 2373, 2539
BssT1I CCWWGG 4 cut(s) 698, 2121, 2373, 2539
Bst2UI CCWGG 2 cut(s) 501, 603
Bst6I CTCTTC 4 cut(s) 1524, 1710, 1794, 1864
BstAUI TGTACA 1 cut(s) 2359
BstC8I GCNNGC 1 cut(s) 2524
BstDEI CTNAG 5 cut(s) 1414, 1480, 1699, 2023, 2330
BstDSI CCRYGG 3 cut(s) 698, 2121, 2373
BstF5I GGATG 7 cut(s) 596, 709, 1132, 1180, 1278, 2049, 2296
BstFNI CGCG 1 cut(s) 1357
BstHHI GCGC 2 cut(s) 628, 1437
BstMAI GTCTC 6 cut(s) 553, 1325, 1506, 1885, 2112, 2490
BstMWI GCNNNNNNNGC 2 cut(s) 623, 634
BstNI CCWGG 2 cut(s) 501, 603
BstNSI RCATGY 1 cut(s) 566
BstSCI CCNGG 2 cut(s) 499, 601
BstSFI CTRYAG 1 cut(s) 2483
BstUI CGCG 1 cut(s) 1357
BstV1I GCAGC 2 cut(s) 318, 1174
BstV2I GAAGAC 1 cut(s) 2342
BstX2I RGATCY 3 cut(s) 280, 1038, 2365
BstYI RGATCY 3 cut(s) 280, 1038, 2365
BsuI GTATCC 1 cut(s) 717
BsuRI GGCC 5 cut(s) 251, 462, 637, 2303, 2383
BtgI CCRYGG 3 cut(s) 698, 2121, 2373
BtsCI GGATG 7 cut(s) 596, 709, 1132, 1180, 1278, 2049, 2296
BtsI GCAGTG 1 cut(s) 822
BtsIMutI CAGTG 3 cut(s) 116, 822, 1522
Cac8I GCNNGC 1 cut(s) 2524
CfoI GCGC 2 cut(s) 628, 1437
Cfr13I GGNCC 4 cut(s) 695, 947, 1260, 1634
CseI GACGC 3 cut(s) 1363, 1902, 2065
Csp6I GTAC 4 cut(s) 921, 2073, 2360, 2534
CspCI CAANNNNNGTGG 4 cut(s) 349, 384, 403, 438
CviQI GTAC 4 cut(s) 921, 2073, 2360, 2534
DdeI CTNAG 5 cut(s) 1414, 1480, 1699, 2023, 2330
DrdI GACNNNNNNGTC 1 cut(s) 1676
DseDI GACNNNNNNGTC 1 cut(s) 1676
EaeI YGGCCR 2 cut(s) 249, 2301
Eam1104I CTCTTC 4 cut(s) 1524, 1710, 1794, 1864
EarI CTCTTC 4 cut(s) 1524, 1710, 1794, 1864
Eco130I CCWWGG 4 cut(s) 698, 2121, 2373, 2539
Eco47I GGWCC 4 cut(s) 695, 947, 1260, 1634
Eco57I CTGAAG 1 cut(s) 870
Eco88I CYCGRG 2 cut(s) 533, 1294
EcoRII CCWGG 2 cut(s) 499, 601
EcoT14I CCWWGG 4 cut(s) 698, 2121, 2373, 2539
EcoT22I ATGCAT 3 cut(s) 1231, 2251, 2339
ErhI CCWWGG 4 cut(s) 698, 2121, 2373, 2539
Esp3I CGTCTC 2 cut(s) 1325, 1885
FalI AAGNNNNNCTT 4 cut(s) 854, 886, 1463, 1495
FaqI GGGAC 4 cut(s) 1507, 1682, 2068, 2289
FauNDI CATATG 4 cut(s) 753, 1193, 1225, 1231
FbaI TGATCA 2 cut(s) 1168, 2221
FblI GTMKAC 1 cut(s) 1530
Fnu4HI GCNGC 3 cut(s) 307, 1163, 2191
FokI GGATG 7 cut(s) 583, 716, 1139, 1187, 1265, 2056, 2303
Fsp4HI GCNGC 3 cut(s) 307, 1163, 2191
FspBI CTAG 9 cut(s) 231, 291, 662, 1337, 1692, 2060, 2066, 2084, 2279
GlaI GCGC 2 cut(s) 627, 1436
GluI GCNGC 3 cut(s) 307, 1163, 2191
GsaI CCCAGC 3 cut(s) 150, 580, 1607
GsuI CTGGAG 3 cut(s) 270, 341, 706
HaeIII GGCC 5 cut(s) 251, 462, 637, 2303, 2383
HapII CCGG 4 cut(s) 266, 552, 2111, 2393
HgaI GACGC 3 cut(s) 1363, 1902, 2065
HhaI GCGC 2 cut(s) 628, 1437
Hin6I GCGC 2 cut(s) 626, 1435
HinP1I GCGC 2 cut(s) 626, 1435
HincII GTYRAC 2 cut(s) 357, 1276
HindII GTYRAC 2 cut(s) 357, 1276
HinfI GANTC 8 cut(s) 193, 262, 448, 665, 737, 1484, 1946, 2306
HpaII CCGG 4 cut(s) 266, 552, 2111, 2393
HphI GGTGA 5 cut(s) 515, 602, 837, 850, 1355
Hpy166II GTNNAC 7 cut(s) 357, 695, 1276, 1301, 1531, 2360, 2432
Hpy188III TCNNGA 6 cut(s) 320, 568, 1042, 1172, 1509, 2111
Hpy8I GTNNAC 7 cut(s) 357, 695, 1276, 1301, 1531, 2360, 2432
Hpy99I CGWCG 1 cut(s) 437
HpyAV CCTTC 4 cut(s) 845, 875, 1659, 1972
HpyCH4IV ACGT 1 cut(s) 2343
HpyF10VI GCNNNNNNNGC 2 cut(s) 623, 634
HpyF3I CTNAG 5 cut(s) 1414, 1480, 1699, 2023, 2330
HpySE526I ACGT 1 cut(s) 2343
HspAI GCGC 2 cut(s) 626, 1435
Kpn2I TCCGGA 1 cut(s) 2110
Ksp22I TGATCA 2 cut(s) 1168, 2221
LguI GCTCTTC 1 cut(s) 1864
LmnI GCTCC 8 cut(s) 322, 824, 916, 1029, 1406, 1474, 2262, 2513
Lsp1109I GCAGC 2 cut(s) 318, 1174
LweI GCATC 7 cut(s) 392, 398, 404, 1165, 1456, 2324, 2535
MaeI CTAG 9 cut(s) 231, 291, 662, 1337, 1692, 2060, 2066, 2084, 2279
MaeII ACGT 1 cut(s) 2343
MaeIII GTNAC 7 cut(s) 72, 120, 268, 373, 649, 1393, 2469
MfeI CAATTG 1 cut(s) 1581
MflI RGATCY 3 cut(s) 280, 1038, 2365
MhlI GDGCHC 1 cut(s) 1479
MlsI TGGCCA 1 cut(s) 251
MluNI TGGCCA 1 cut(s) 251
MlyI GAGTC 1 cut(s) 2300
MmeI TCCRAC 4 cut(s) 456, 1306, 1542, 1777
Mox20I TGGCCA 1 cut(s) 251
Mph1103I ATGCAT 3 cut(s) 1231, 2251, 2339
MroI TCCGGA 1 cut(s) 2110
MroXI GAANNNNTTC 3 cut(s) 855, 2134, 2424
MscI TGGCCA 1 cut(s) 251
MseI TTAA 8 cut(s) 710, 804, 873, 980, 1500, 1722, 1865, 1955
MslI CAYNNNNRTG 2 cut(s) 1149, 2217
Msp20I TGGCCA 1 cut(s) 251
MspA1I CMGCKG 1 cut(s) 2190
MspI CCGG 4 cut(s) 266, 552, 2111, 2393
MspR9I CCNGG 2 cut(s) 501, 603
MunI CAATTG 1 cut(s) 1581
Mva1269I GAATGC 2 cut(s) 2273, 2337
MvaI CCWGG 2 cut(s) 501, 603
MvnI CGCG 1 cut(s) 1357
MwoI GCNNNNNNNGC 2 cut(s) 623, 634
NcoI CCATGG 3 cut(s) 698, 2121, 2373
NdeI CATATG 4 cut(s) 753, 1193, 1225, 1231
NlaIV GGNNCC 3 cut(s) 474, 912, 1408
NmeAIII GCCGAG 1 cut(s) 2076
NmuCI GTSAC 3 cut(s) 72, 120, 649
NsiI ATGCAT 3 cut(s) 1231, 2251, 2339
NspI RCATGY 1 cut(s) 566
PciI ACATGT 1 cut(s) 562
PciSI GCTCTTC 1 cut(s) 1864
PctI GAATGC 2 cut(s) 2273, 2337
PdmI GAANNNNTTC 3 cut(s) 855, 2134, 2424
PfeI GAWTC 7 cut(s) 193, 262, 448, 665, 737, 1484, 1946
PflMI CCANNNNNTGG 1 cut(s) 704
PkrI GCNGC 3 cut(s) 308, 1164, 2192
PleI GAGTC 1 cut(s) 2300
PpsI GAGTC 1 cut(s) 2300
PscI ACATGT 1 cut(s) 562
PsiI TTATAA 1 cut(s) 96
Psp6I CCWGG 2 cut(s) 499, 601
PspFI CCCAGC 3 cut(s) 146, 576, 1603
PspGI CCWGG 2 cut(s) 499, 601
PspN4I GGNNCC 3 cut(s) 474, 912, 1408
PspPI GGNCC 4 cut(s) 695, 947, 1260, 1634
PsuI RGATCY 3 cut(s) 280, 1038, 2365
RsaI GTAC 4 cut(s) 922, 2074, 2361, 2535
RsaNI GTAC 4 cut(s) 921, 2073, 2360, 2534
RseI CAYNNNNRTG 2 cut(s) 1149, 2217
SapI GCTCTTC 1 cut(s) 1864
SaqAI TTAA 8 cut(s) 710, 804, 873, 980, 1500, 1722, 1865, 1955
SatI GCNGC 3 cut(s) 307, 1163, 2191
Sau96I GGNCC 4 cut(s) 695, 947, 1260, 1634
ScaI AGTACT 2 cut(s) 2074, 2535
SchI GAGTC 1 cut(s) 2300
ScrFI CCNGG 2 cut(s) 501, 603
SduI GDGCHC 1 cut(s) 1479
SfaNI GCATC 7 cut(s) 392, 398, 404, 1165, 1456, 2324, 2535
SfcI CTRYAG 1 cut(s) 2483
SinI GGWCC 4 cut(s) 695, 947, 1260, 1634
SmiMI CAYNNNNRTG 2 cut(s) 1149, 2217
SpeI ACTAGT 2 cut(s) 1336, 2083
SsiI CCGC 3 cut(s) 6, 1357, 2190
SspI AATATT 2 cut(s) 409, 1990
SspMI CTAG 9 cut(s) 231, 291, 662, 1337, 1692, 2060, 2066, 2084, 2279
StyD4I CCNGG 2 cut(s) 499, 601
StyI CCWWGG 4 cut(s) 698, 2121, 2373, 2539
TaiI ACGT 1 cut(s) 2346
TaqI TCGA 2 cut(s) 1487, 1569
TatI WGTACW 3 cut(s) 2072, 2359, 2533
TauI GCSGC 1 cut(s) 2193
TfiI GAWTC 7 cut(s) 193, 262, 448, 665, 737, 1484, 1946
Tru1I TTAA 8 cut(s) 710, 804, 873, 980, 1500, 1722, 1865, 1955
Tru9I TTAA 8 cut(s) 710, 804, 873, 980, 1500, 1722, 1865, 1955
TscAI CASTG 3 cut(s) 123, 829, 1529
TseFI GTSAC 3 cut(s) 72, 120, 649
TseI GCWGC 2 cut(s) 306, 1162
Tsp45I GTSAC 3 cut(s) 72, 120, 649
TspGWI ACGGA 1 cut(s) 1307
TspRI CASTG 3 cut(s) 123, 829, 1529
Van91I CCANNNNNTGG 1 cut(s) 704
VpaK11BI GGWCC 4 cut(s) 695, 947, 1260, 1634
XapI RAATTY 6 cut(s) 27, 222, 608, 1154, 1951, 2132
XceI RCATGY 1 cut(s) 566
XmiI GTMKAC 1 cut(s) 1530
XmnI GAANNNNTTC 3 cut(s) 855, 2134, 2424
XspI CTAG 9 cut(s) 231, 291, 662, 1337, 1692, 2060, 2066, 2084, 2279
ZrmI AGTACT 2 cut(s) 2074, 2535
Zsp2I ATGCAT 3 cut(s) 1231, 2251, 2339
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.