AT1G10430

serine threonine-protein phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0003085
Physical Location & Seq
Reverse (-)
3428478 .. 3430924
2447 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G10430.1

Sequence Viewer

Length: 921 bp
ATGCCGTCGAACGGAGATCTGGACCGTCAGATCGAGCAGCTGATGGAGTGTAAACCGTTATCGGAGGCGGATGTGAGGACGCTTTGCGATCAAGCGAGAGCGATCCTTGTCGAGGAATATAATGTTCAGCCGGTGAAGTGTCCTGTTACCGTTTGCGGCGATATTCACGGCCAGTTTTATGACCTTATTGAGCTCTTTCGTATCGGTGGCAACGCTCCTGATACTAACTACCTCTTCATGGGAGACTATGTAGATCGTGGCTACTATTCAGTAGAGACAGTTTCTCTATTGGTGGCACTAAAAGTGCGATACAGGGATAGACTTACAATCTTACGAGGGAATCACGAGAGTCGGCAGATTACTCAAGTCTATGGTTTTTATGACGAATGCTTGAGGAAGTACGGAAATGCTAACGTCTGGAAGTATTTTACAGACCTTTTCGATTATCTTCCTCTTACCGCCCTCATAGAGAGTCAGGTTTTCTGTTTGCATGGAGGGCTTTCACCTTCTCTGGATACTCTTGATAATATCCGAAGCTTGGATCGGATACAGGAGGTTCCACACGAAGGACCTATGTGTGATTTATTATGGTCTGATCCTGATGATCGATGTGGATGGGGAATATCTCCACGAGGTGCTGGTTATACATTTGGACAGGATATCGCAGCTCAATTTAATCACAACAATGGACTAAGTCTCATATCAAGAGCGCATCAACTTGTCATGGAAGGTTTTAACTGGTGTCAGGATAAGAATGTGGTGACTGTGTTTAGTGCACCAAACTATTGCTACCGGTGTGGAAACATGGCTGCCATTCTAGAGATAGGAGAGAACATGGAGCAAAACTTCCTCCAGTTCGATCCAGCTCCTCGACAAGTTGAACCTGATACTACTCGGAAGACCCCTGATTATTTTTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005777 GO:0005829 GO:0005886 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0008104 GO:0008150 GO:0008152 GO:0009657 GO:0009658 GO:0009787 GO:0009788 GO:0009893 GO:0009894 GO:0009896 GO:0009902 GO:0009903 GO:0009966 GO:0009968 GO:0009987 GO:0010565 GO:0010646 GO:0010648 GO:0016020 GO:0016043 GO:0016311 GO:0019216 GO:0019217 GO:0019222 GO:0019538 GO:0019750 GO:0023051 GO:0023057 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031998 GO:0032000 GO:0033036 GO:0034613 GO:0036211 GO:0042579 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045834 GO:0045923 GO:0046320 GO:0046321 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050994 GO:0050996 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051644 GO:0051649 GO:0051656 GO:0051667 GO:0062012 GO:0062013 GO:0065007 GO:0070727 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:1901419 GO:1901420 GO:1901564 GO:1905957 GO:1905958
KEGG Pathways
Metabolic & Signaling
ko03015 ko04013 ko04071 ko04111 ko04113 ko04114 ko04136 ko04138 ko04140 ko04151 ko04152 ko04261 ko04350 ko04390 ko04391 ko04530 ko04728 ko04730 ko05142 ko05160 ko05165 map03015 map04013 map04071 map04111 map04113 map04114 map04136 map04138 map04140 map04151 map04152 map04261 map04350 map04390 map04391 map04530 map04728 map04730 map05142 map05160 map05165
Pfam Domains
Protein Families
Metallophos

Protein Analysis

306

Amino Acids

34.93

Weight (kDa)

4.72

Isoelectric Point (pI)

40.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 48 - 241 1.1e-46 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 68, 156, 459
AclWI GGATC 4 cut(s) 97, 549, 590, 854
AcoI YGGCCR 1 cut(s) 169
AdeI CACNNNGTG 1 cut(s) 635
AfaI GTAC 1 cut(s) 401
AfiI CCNNNNNNNGG 5 cut(s) 11, 112, 238, 538, 566
AgeI ACCGGT 1 cut(s) 792
AgsI TTSAA 1 cut(s) 881
AluBI AGCT 5 cut(s) 40, 193, 537, 668, 866
AluI AGCT 5 cut(s) 40, 193, 537, 668, 866
Alw21I GWGCWC 2 cut(s) 195, 778
Alw26I GTCTC 3 cut(s) 237, 269, 701
Alw44I GTGCAC 1 cut(s) 774
AlwI GGATC 4 cut(s) 97, 549, 590, 854
AoxI GGCC 1 cut(s) 169
ApaLI GTGCAC 1 cut(s) 774
ApeKI GCWGC 3 cut(s) 37, 665, 809
AsiGI ACCGGT 1 cut(s) 792
AspLEI GCGC 1 cut(s) 712
AspS9I GGNCC 2 cut(s) 22, 569
AsuHPI GGTGA 3 cut(s) 145, 495, 772
AvaII GGWCC 2 cut(s) 22, 569
BaeGI GKGCMC 1 cut(s) 778
BanII GRGCYC 1 cut(s) 195
BauI CACGAG 2 cut(s) 344, 630
BbsI GAAGAC 1 cut(s) 905
Bbv12I GWGCWC 2 cut(s) 195, 778
BbvI GCAGC 3 cut(s) 49, 677, 796
BccI CCATC 2 cut(s) 37, 609
BceAI ACGGC 1 cut(s) 184
BciVI GTATCC 2 cut(s) 508, 540
BcoDI GTCTC 3 cut(s) 237, 269, 701
BfaI CTAG 1 cut(s) 818
BfuI GTATCC 2 cut(s) 508, 540
BglII AGATCT 1 cut(s) 16
BisI GCNGC 4 cut(s) 38, 157, 666, 810
BlsI GCNGC 4 cut(s) 39, 158, 667, 811
Bme18I GGWCC 2 cut(s) 22, 569
BmgT120I GGNCC 2 cut(s) 22, 569
BmiI GGNNCC 1 cut(s) 558
BmsI GCATC 1 cut(s) 721
BpiI GAAGAC 1 cut(s) 905
BpmI CTGGAG 1 cut(s) 836
BpuEI CTTGAG 2 cut(s) 348, 412
Bsa29I ATCGAT 1 cut(s) 607
BsaWI WCCGGW 1 cut(s) 792
BsaXI ACNNNNNCTCC 2 cut(s) 234, 264
Bsc4I CCNNNNNNNGG 5 cut(s) 11, 112, 238, 538, 566
Bse118I RCCGGY 2 cut(s) 130, 792
Bse1I ACTGG 3 cut(s) 172, 743, 853
BseCI ATCGAT 1 cut(s) 607
BseGI GGATG 2 cut(s) 76, 620
BseLI CCNNNNNNNGG 5 cut(s) 11, 112, 238, 538, 566
BseNI ACTGG 3 cut(s) 172, 743, 853
BseRI GAGGAG 1 cut(s) 858
BseSI GKGCMC 1 cut(s) 778
BseXI GCAGC 3 cut(s) 49, 677, 796
BshFI GGCC 1 cut(s) 171
BshTI ACCGGT 1 cut(s) 792
BshVI ATCGAT 1 cut(s) 607
BsiHKAI GWGCWC 2 cut(s) 195, 778
BsiSI CCGG 2 cut(s) 131, 793
BslI CCNNNNNNNGG 5 cut(s) 11, 112, 238, 538, 566
BsmAI GTCTC 3 cut(s) 237, 269, 701
BsmI GAATGC 1 cut(s) 392
BsnI GGCC 1 cut(s) 171
Bsp1286I GDGCHC 2 cut(s) 195, 778
Bsp143I GATC 9 cut(s) 16, 30, 88, 102, 253, 541, 595, 604, 859
BspACI CCGC 3 cut(s) 68, 156, 459
BspANI GGCC 1 cut(s) 171
BspDI ATCGAT 1 cut(s) 607
BspLI GGNNCC 1 cut(s) 558
BspPI GGATC 4 cut(s) 97, 549, 590, 854
BsrFI RCCGGY 2 cut(s) 130, 792
BsrI ACTGG 3 cut(s) 172, 743, 853
BssAI RCCGGY 2 cut(s) 130, 792
BssMI GATC 9 cut(s) 16, 30, 88, 102, 253, 541, 595, 604, 859
BssSI CACGAG 2 cut(s) 344, 630
Bst2BI CACGAG 2 cut(s) 344, 630
Bst4CI ACNGT 5 cut(s) 26, 57, 151, 280, 766
Bst6I CTCTTC 1 cut(s) 239
BstDEI CTNAG 1 cut(s) 692
BstENI CCTNNNNNAGG 1 cut(s) 110
BstF5I GGATG 2 cut(s) 76, 620
BstHHI GCGC 1 cut(s) 712
BstKTI GATC 9 cut(s) 19, 33, 91, 105, 256, 544, 598, 607, 862
BstMAI GTCTC 3 cut(s) 237, 269, 701
BstMBI GATC 9 cut(s) 16, 30, 88, 102, 253, 541, 595, 604, 859
BstMWI GCNNNNNNNGC 1 cut(s) 496
BstSLI GKGCMC 1 cut(s) 778
BstV1I GCAGC 3 cut(s) 49, 677, 796
BstV2I GAAGAC 1 cut(s) 905
BstX2I RGATCY 1 cut(s) 16
BstYI RGATCY 1 cut(s) 16
Bsu15I ATCGAT 1 cut(s) 607
BsuI GTATCC 2 cut(s) 508, 540
BsuRI GGCC 1 cut(s) 171
BsuTUI ATCGAT 1 cut(s) 607
BtsCI GGATG 2 cut(s) 76, 620
CfoI GCGC 1 cut(s) 712
Cfr10I RCCGGY 2 cut(s) 130, 792
Cfr13I GGNCC 2 cut(s) 22, 569
ClaI ATCGAT 1 cut(s) 607
CseI GACGC 1 cut(s) 88
Csp6I GTAC 1 cut(s) 400
CspAI ACCGGT 1 cut(s) 792
CviAII CATG 5 cut(s) 238, 491, 724, 805, 835
CviQI GTAC 1 cut(s) 400
DdeI CTNAG 1 cut(s) 692
DpnI GATC 9 cut(s) 18, 32, 90, 104, 255, 543, 597, 606, 861
DpnII GATC 9 cut(s) 16, 30, 88, 102, 253, 541, 595, 604, 859
DraIII CACNNNGTG 1 cut(s) 635
EaeI YGGCCR 1 cut(s) 169
Eam1104I CTCTTC 1 cut(s) 239
EarI CTCTTC 1 cut(s) 239
EciI GGCGGA 1 cut(s) 83
Ecl136II GAGCTC 1 cut(s) 193
Eco24I GRGCYC 1 cut(s) 195
Eco32I GATATC 1 cut(s) 661
Eco47I GGWCC 2 cut(s) 22, 569
Eco53kI GAGCTC 1 cut(s) 193
EcoICRI GAGCTC 1 cut(s) 193
EcoNI CCTNNNNNAGG 1 cut(s) 110
EcoO109I RGGNCCY 1 cut(s) 569
EcoRV GATATC 1 cut(s) 661
EcoT38I GRGCYC 1 cut(s) 195
FaeI CATG 5 cut(s) 241, 494, 727, 808, 838
FatI CATG 5 cut(s) 237, 490, 723, 804, 834
Fnu4HI GCNGC 4 cut(s) 38, 157, 666, 810
FokI GGATG 2 cut(s) 83, 627
FriOI GRGCYC 1 cut(s) 195
Fsp4HI GCNGC 4 cut(s) 38, 157, 666, 810
FspBI CTAG 1 cut(s) 818
GlaI GCGC 1 cut(s) 711
GluI GCNGC 4 cut(s) 38, 157, 666, 810
GsuI CTGGAG 1 cut(s) 836
HaeIII GGCC 1 cut(s) 171
HapII CCGG 2 cut(s) 131, 793
HgaI GACGC 1 cut(s) 88
HhaI GCGC 1 cut(s) 712
Hin1II CATG 5 cut(s) 241, 494, 727, 808, 838
Hin6I GCGC 1 cut(s) 710
HinP1I GCGC 1 cut(s) 710
HindIII AAGCTT 1 cut(s) 535
HinfI GANTC 3 cut(s) 340, 349, 472
HpaII CCGG 2 cut(s) 131, 793
HphI GGTGA 3 cut(s) 145, 495, 772
Hpy166II GTNNAC 2 cut(s) 53, 776
Hpy188I TCNGA 6 cut(s) 30, 64, 533, 546, 595, 897
Hpy8I GTNNAC 2 cut(s) 53, 776
Hpy99I CGWCG 1 cut(s) 10
HpyAV CCTTC 3 cut(s) 516, 560, 722
HpyCH4III ACNGT 5 cut(s) 26, 57, 151, 280, 766
HpyCH4IV ACGT 1 cut(s) 414
HpyCH4V TGCA 2 cut(s) 490, 776
HpyF10VI GCNNNNNNNGC 1 cut(s) 496
HpyF3I CTNAG 1 cut(s) 692
HpySE526I ACGT 1 cut(s) 414
Hsp92II CATG 5 cut(s) 241, 494, 727, 808, 838
HspAI GCGC 1 cut(s) 710
Kzo9I GATC 9 cut(s) 16, 30, 88, 102, 253, 541, 595, 604, 859
LmnI GCTCC 3 cut(s) 220, 838, 871
Lsp1109I GCAGC 3 cut(s) 49, 677, 796
LweI GCATC 1 cut(s) 721
MaeI CTAG 1 cut(s) 818
MaeII ACGT 1 cut(s) 414
MaeIII GTNAC 2 cut(s) 145, 760
MalI GATC 9 cut(s) 18, 32, 90, 104, 255, 543, 597, 606, 861
MboI GATC 9 cut(s) 16, 30, 88, 102, 253, 541, 595, 604, 859
MboII GAAGA 3 cut(s) 226, 440, 910
MflI RGATCY 1 cut(s) 16
MhlI GDGCHC 2 cut(s) 195, 778
MluCI AATT 1 cut(s) 671
MlyI GAGTC 2 cut(s) 358, 481
MseI TTAA 2 cut(s) 675, 735
MslI CAYNNNNRTG 1 cut(s) 684
MspA1I CMGCKG 1 cut(s) 40
MspI CCGG 2 cut(s) 131, 793
Mva1269I GAATGC 1 cut(s) 392
MwoI GCNNNNNNNGC 1 cut(s) 496
NdeII GATC 9 cut(s) 16, 30, 88, 102, 253, 541, 595, 604, 859
NlaIII CATG 5 cut(s) 241, 494, 727, 808, 838
NlaIV GGNNCC 1 cut(s) 558
NmuCI GTSAC 1 cut(s) 760
PctI GAATGC 1 cut(s) 392
PfeI GAWTC 1 cut(s) 340
PflFI GACNNNGTC 1 cut(s) 693
PinAI ACCGGT 1 cut(s) 792
PkrI GCNGC 4 cut(s) 39, 158, 667, 811
PleI GAGTC 2 cut(s) 357, 480
PpsI GAGTC 2 cut(s) 357, 480
PpuMI RGGWCCY 1 cut(s) 569
Psp124BI GAGCTC 1 cut(s) 195
Psp5II RGGWCCY 1 cut(s) 569
PspN4I GGNNCC 1 cut(s) 558
PspPI GGNCC 2 cut(s) 22, 569
PspPPI RGGWCCY 1 cut(s) 569
PsuI RGATCY 1 cut(s) 16
PsyI GACNNNGTC 1 cut(s) 693
PvuII CAGCTG 1 cut(s) 40
RsaI GTAC 1 cut(s) 401
RsaNI GTAC 1 cut(s) 400
RseI CAYNNNNRTG 1 cut(s) 684
SacI GAGCTC 1 cut(s) 195
SaqAI TTAA 2 cut(s) 675, 735
SatI GCNGC 4 cut(s) 38, 157, 666, 810
Sau3AI GATC 9 cut(s) 16, 30, 88, 102, 253, 541, 595, 604, 859
Sau96I GGNCC 2 cut(s) 22, 569
SchI GAGTC 2 cut(s) 358, 481
SduI GDGCHC 2 cut(s) 195, 778
SfaNI GCATC 1 cut(s) 721
SinI GGWCC 2 cut(s) 22, 569
SmiMI CAYNNNNRTG 1 cut(s) 684
SmlI CTYRAG 2 cut(s) 363, 391
SmoI CTYRAG 2 cut(s) 363, 391
Sse9I AATT 1 cut(s) 671
SsiI CCGC 3 cut(s) 68, 156, 459
SspMI CTAG 1 cut(s) 818
SstI GAGCTC 1 cut(s) 195
TaaI ACNGT 5 cut(s) 26, 57, 151, 280, 766
TaiI ACGT 1 cut(s) 417
TaqI TCGA 7 cut(s) 8, 33, 111, 441, 607, 858, 871
TasI AATT 1 cut(s) 671
TauI GCSGC 1 cut(s) 159
TfiI GAWTC 1 cut(s) 340
Tru1I TTAA 2 cut(s) 675, 735
Tru9I TTAA 2 cut(s) 675, 735
TseFI GTSAC 1 cut(s) 760
TseI GCWGC 3 cut(s) 37, 665, 809
Tsp45I GTSAC 1 cut(s) 760
TspDTI ATGAA 1 cut(s) 226
TspGWI ACGGA 2 cut(s) 27, 417
Tth111I GACNNNGTC 1 cut(s) 693
VneI GTGCAC 1 cut(s) 774
VpaK11BI GGWCC 2 cut(s) 22, 569
XagI CCTNNNNNAGG 1 cut(s) 110
XbaI TCTAGA 1 cut(s) 817
XspI CTAG 1 cut(s) 818
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.