Rmu_sc0017616.1_g000002

serine threonine-protein phosphatase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0017616.1
Physical Location & Seq
Reverse (-)
9118 .. 12719
3602 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0017616.1_g000002.1.cds

Sequence Viewer

Length: 1203 bp
atgccggaaacacccttgcgccgtggatgcacgctactatcaaccagccctttcaccagatcaaatccaatagatcagatccagatcgatcagtgcaacgtcgcgccgccacgagccctccaccacccagcagcctccgaagtcgcgccgcttatcgcctccgctgacgaggccagcgatgaacaacctaaatctcgacagccacaaacctccgctccactccatttccggcgagtccagctcccaccgcaccgccaatcaagacctaaaatctccaccacgatgccgccgaaagccgatctggaccgtcagatcgaccacctgatgcagtgcaagcctctgacggaggcggaggtgaagacgctgtgcgagcaagcgaggacgatcctcgtcgaggagtggaatgtgcagccggtcaagtgtccggtcaccgtctgcggcgacatccacggccagtttcacgaccttgttgagctctttcggatcggcggcagtgctcccgataccaattatctcttcatgggtgactatgtagatcgaggatactactcagtggagactgtcacacttctagtggccctgaaagtacgttacagagatagaattacaattctcagaggaaatcatgagagtcggcaaattactcaagtgtatgggttttatgatgagtgtttgaggaaatatggaaatgctaatgtatggaagcatttcaccgacctttttgattatctgccattgacagctttaatcgagagtcagatcttctgcttgcatggtggactatccccctctttggatacattggacaatattcgggctcttgatcgcatacaggaggttcctcatgagggcccaatgtgtgatctcttgtggtctgatccggatgatcgatgtggttggggaatatctcctcgaggtgcagggtatacttttggtcaagatatagcagctcagtttaaccatactaatgggctgagtcttatttctagagctcaccagcttgttatggaaggctacaattggtgccaggaaaagaacgttgtaactgtatttagtgctccaaattactgctatcgatgtggcaatatggctgcaatcctcgagattggagagaatatggagcagaatttccttcaatttgacccagcacctcgtcaggttgaacccgatacaacacgaagaactccagactattttttgtaa

Protein Analysis

400

Amino Acids

45.36

Weight (kDa)

5.63

Isoelectric Point (pI)

43.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 912
AccB1I GGYRCC 1 cut(s) 1023
AccBSI CCGCTC 1 cut(s) 215
AccI GTMKAC 1 cut(s) 926
AccII CGCG 2 cut(s) 104, 146
AccIII TCCGGA 1 cut(s) 880
AclI AACGTT 1 cut(s) 1038
AclWI GGATC 4 cut(s) 73, 379, 491, 872
AcoI YGGCCR 1 cut(s) 451
AcsI RAATTY 1 cut(s) 1126
AfaI GTAC 1 cut(s) 588
AfiI CCNNNNNNNGG 3 cut(s) 394, 793, 848
AgsI TTSAA 2 cut(s) 1136, 1163
AjnI CCWGG 1 cut(s) 1026
AjuI GAANNNNNNNTTGG 2 cut(s) 500, 532
AluBI AGCT 6 cut(s) 241, 475, 743, 950, 992, 1000
AluI AGCT 6 cut(s) 241, 475, 743, 950, 992, 1000
Alw21I GWGCWC 4 cut(s) 477, 499, 994, 1060
Alw26I GTCTC 1 cut(s) 551
AlwI GGATC 4 cut(s) 73, 379, 491, 872
Ama87I CYCGRG 2 cut(s) 912, 1100
Aor13HI TCCGGA 1 cut(s) 880
AoxI GGCC 4 cut(s) 171, 451, 576, 850
ApaI GGGCCC 1 cut(s) 854
ApeKI GCWGC 4 cut(s) 131, 409, 947, 1091
ApoI RAATTY 1 cut(s) 1126
Asp700I GAANNNNTTC 1 cut(s) 707
AspLEI GCGC 3 cut(s) 21, 106, 148
AspS9I GGNCC 4 cut(s) 304, 577, 850, 851
AsuHPI GGTGA 6 cut(s) 46, 367, 421, 536, 703, 986
AvaI CYCGRG 2 cut(s) 912, 1100
AvaII GGWCC 1 cut(s) 304
BaeGI GKGCMC 1 cut(s) 854
BanI GGYRCC 1 cut(s) 1023
BanII GRGCYC 5 cut(s) 118, 477, 820, 854, 994
BauI CACGAG 1 cut(s) 111
BbsI GAAGAC 1 cut(s) 365
Bbv12I GWGCWC 4 cut(s) 477, 499, 994, 1060
BbvI GCAGC 4 cut(s) 143, 421, 959, 1078
BceAI ACGGC 2 cut(s) 6, 466
BciT130I CCWGG 1 cut(s) 1028
BciVI GTATCC 2 cut(s) 536, 790
BcoDI GTCTC 1 cut(s) 551
BfaI CTAG 2 cut(s) 572, 987
BfuI GTATCC 2 cut(s) 536, 790
BglII AGATCT 1 cut(s) 759
BisI GCNGC 9 cut(s) 107, 132, 149, 287, 410, 439, 490, 948, 1092
BlsI GCNGC 9 cut(s) 108, 133, 150, 288, 411, 440, 491, 949, 1093
Bme1390I CCNGG 1 cut(s) 1028
Bme18I GGWCC 1 cut(s) 304
BmeT110I CYCGRG 2 cut(s) 912, 1100
BmgT120I GGNCC 4 cut(s) 304, 577, 850, 851
BmiI GGNNCC 3 cut(s) 840, 852, 1025
BmrFI CCNGG 1 cut(s) 1028
BmsI GCATC 3 cut(s) 17, 273, 315
BpiI GAAGAC 1 cut(s) 365
BplI GAGNNNNNCTC 2 cut(s) 225, 257
BpmI CTGGAG 1 cut(s) 1170
BpuEI CTTGAG 1 cut(s) 630
Bsa29I ATCGAT 3 cut(s) 87, 889, 1075
BsaBI GATNNNNATC 1 cut(s) 83
BsaJI CCNNGG 2 cut(s) 22, 448
BsaWI WCCGGW 2 cut(s) 424, 880
BsaXI ACNNNNNCTCC 4 cut(s) 102, 132, 199, 229
Bsc4I CCNNNNNNNGG 3 cut(s) 394, 793, 848
Bse118I RCCGGY 1 cut(s) 412
Bse1I ACTGG 1 cut(s) 454
Bse8I GATNNNNATC 1 cut(s) 83
BseAI TCCGGA 1 cut(s) 880
BseBI CCWGG 1 cut(s) 1028
BseCI ATCGAT 3 cut(s) 87, 889, 1075
BseDI CCNNGG 2 cut(s) 22, 448
BseGI GGATG 3 cut(s) 32, 444, 889
BseJI GATNNNNATC 1 cut(s) 83
BseLI CCNNNNNNNGG 3 cut(s) 394, 793, 848
BseMII CTCAG 4 cut(s) 564, 628, 965, 965
BseNI ACTGG 1 cut(s) 454
BseRI GAGGAG 2 cut(s) 410, 900
BseSI GKGCMC 1 cut(s) 854
BseXI GCAGC 4 cut(s) 143, 421, 959, 1078
BseYI CCCAGC 2 cut(s) 127, 1144
BsgI GTGCAG 2 cut(s) 428, 939
Bsh1236I CGCG 2 cut(s) 104, 146
BshFI GGCC 4 cut(s) 173, 453, 578, 852
BshNI GGYRCC 1 cut(s) 1023
BshVI ATCGAT 3 cut(s) 87, 889, 1075
BsiHKAI GWGCWC 4 cut(s) 477, 499, 994, 1060
BsiHKCI CYCGRG 2 cut(s) 912, 1100
BsiSI CCGG 5 cut(s) 5, 229, 413, 425, 881
BslI CCNNNNNNNGG 3 cut(s) 394, 793, 848
BsmAI GTCTC 1 cut(s) 551
BsnI GGCC 4 cut(s) 173, 453, 578, 852
BsoBI CYCGRG 2 cut(s) 912, 1100
Bsp120I GGGCCC 1 cut(s) 850
Bsp1286I GDGCHC 7 cut(s) 118, 477, 499, 820, 854, 994, 1060
Bsp13I TCCGGA 1 cut(s) 880
BspANI GGCC 4 cut(s) 173, 453, 578, 852
BspCNI CTCAG 4 cut(s) 563, 627, 964, 966
BspDI ATCGAT 3 cut(s) 87, 889, 1075
BspEI TCCGGA 1 cut(s) 880
BspFNI CGCG 2 cut(s) 104, 146
BspHI TCATGA 2 cut(s) 625, 844
BspLI GGNNCC 3 cut(s) 840, 852, 1025
BspPI GGATC 4 cut(s) 73, 379, 491, 872
BspT107I GGYRCC 1 cut(s) 1023
BsrBI CCGCTC 1 cut(s) 215
BsrFI RCCGGY 1 cut(s) 412
BsrI ACTGG 1 cut(s) 454
BssAI RCCGGY 1 cut(s) 412
BssECI CCNNGG 2 cut(s) 22, 448
BssNAI GTATAC 1 cut(s) 927
BssSI CACGAG 1 cut(s) 111
Bst1107I GTATAC 1 cut(s) 927
Bst2BI CACGAG 1 cut(s) 111
Bst2UI CCWGG 1 cut(s) 1028
Bst4CI ACNGT 4 cut(s) 308, 433, 562, 1048
Bst6I CTCTTC 1 cut(s) 521
BstC8I GCNNGC 6 cut(s) 32, 175, 335, 371, 375, 770
BstDEI CTNAG 4 cut(s) 550, 614, 951, 974
BstDSI CCRYGG 2 cut(s) 22, 448
BstEII GGTNACC 1 cut(s) 427
BstENI CCTNNNNNAGG 1 cut(s) 392
BstF5I GGATG 3 cut(s) 32, 444, 889
BstFNI CGCG 2 cut(s) 104, 146
BstHHI GCGC 3 cut(s) 21, 106, 148
BstMAI GTCTC 1 cut(s) 551
BstMWI GCNNNNNNNGC 6 cut(s) 27, 170, 238, 247, 334, 370
BstNI CCWGG 1 cut(s) 1028
BstPI GGTNACC 1 cut(s) 427
BstSCI CCNGG 1 cut(s) 1026
BstSLI GKGCMC 1 cut(s) 854
BstUI CGCG 2 cut(s) 104, 146
BstV1I GCAGC 4 cut(s) 143, 421, 959, 1078
BstV2I GAAGAC 1 cut(s) 365
BstX2I RGATCY 2 cut(s) 78, 759
BstXI CCANNNNNNTGG 1 cut(s) 968
BstYI RGATCY 2 cut(s) 78, 759
BstZ17I GTATAC 1 cut(s) 927
Bsu15I ATCGAT 3 cut(s) 87, 889, 1075
BsuI GTATCC 2 cut(s) 536, 790
BsuRI GGCC 4 cut(s) 173, 453, 578, 852
BsuTUI ATCGAT 3 cut(s) 87, 889, 1075
BtgI CCRYGG 2 cut(s) 22, 448
BtgZI GCGATG 1 cut(s) 192
BtsCI GGATG 3 cut(s) 32, 444, 889
BtsI GCAGTG 2 cut(s) 335, 499
BtsIMutI CAGTG 4 cut(s) 98, 335, 499, 558
Cac8I GCNNGC 6 cut(s) 32, 175, 335, 371, 375, 770
CciI TCATGA 2 cut(s) 625, 844
CfoI GCGC 3 cut(s) 21, 106, 148
Cfr10I RCCGGY 1 cut(s) 412
Cfr13I GGNCC 4 cut(s) 304, 577, 850, 851
ClaI ATCGAT 3 cut(s) 87, 889, 1075
CseI GACGC 1 cut(s) 370
Csp6I GTAC 1 cut(s) 587
CviAII CATG 4 cut(s) 520, 626, 773, 845
CviQI GTAC 1 cut(s) 587
DdeI CTNAG 4 cut(s) 550, 614, 951, 974
EaeI YGGCCR 1 cut(s) 451
Eam1104I CTCTTC 1 cut(s) 521
EarI CTCTTC 1 cut(s) 521
EciI GGCGGA 1 cut(s) 365
Ecl136II GAGCTC 2 cut(s) 475, 992
Eco24I GRGCYC 5 cut(s) 118, 477, 820, 854, 994
Eco47I GGWCC 1 cut(s) 304
Eco53kI GAGCTC 2 cut(s) 475, 992
Eco88I CYCGRG 2 cut(s) 912, 1100
Eco91I GGTNACC 1 cut(s) 427
EcoICRI GAGCTC 2 cut(s) 475, 992
EcoNI CCTNNNNNAGG 1 cut(s) 392
EcoO109I RGGNCCY 1 cut(s) 850
EcoO65I GGTNACC 1 cut(s) 427
EcoRII CCWGG 1 cut(s) 1026
EcoT38I GRGCYC 5 cut(s) 118, 477, 820, 854, 994
FaeI CATG 4 cut(s) 523, 629, 776, 848
FatI CATG 4 cut(s) 519, 625, 772, 844
FblI GTMKAC 1 cut(s) 926
Fnu4HI GCNGC 9 cut(s) 107, 132, 149, 287, 410, 439, 490, 948, 1092
FokI GGATG 3 cut(s) 39, 431, 896
FriOI GRGCYC 5 cut(s) 118, 477, 820, 854, 994
Fsp4HI GCNGC 9 cut(s) 107, 132, 149, 287, 410, 439, 490, 948, 1092
FspBI CTAG 2 cut(s) 572, 987
GlaI GCGC 3 cut(s) 20, 105, 147
GluI GCNGC 9 cut(s) 107, 132, 149, 287, 410, 439, 490, 948, 1092
GsaI CCCAGC 2 cut(s) 131, 1148
GsuI CTGGAG 1 cut(s) 1170
HaeIII GGCC 4 cut(s) 173, 453, 578, 852
HapII CCGG 5 cut(s) 5, 229, 413, 425, 881
HgaI GACGC 1 cut(s) 370
HhaI GCGC 3 cut(s) 21, 106, 148
Hin1II CATG 4 cut(s) 523, 629, 776, 848
Hin6I GCGC 3 cut(s) 19, 104, 146
HinP1I GCGC 3 cut(s) 19, 104, 146
HinfI GANTC 4 cut(s) 234, 631, 754, 976
HpaII CCGG 5 cut(s) 5, 229, 413, 425, 881
HphI GGTGA 6 cut(s) 46, 367, 421, 536, 703, 986
Hpy166II GTNNAC 2 cut(s) 779, 927
Hpy188I TCNGA 8 cut(s) 78, 139, 312, 342, 483, 617, 759, 877
Hpy8I GTNNAC 2 cut(s) 779, 927
Hpy99I CGWCG 2 cut(s) 104, 395
HpyAV CCTTC 2 cut(s) 1004, 1142
HpyCH4III ACNGT 4 cut(s) 308, 433, 562, 1048
HpyCH4IV ACGT 3 cut(s) 99, 589, 1038
HpyCH4V TGCA 8 cut(s) 30, 96, 328, 333, 409, 772, 920, 1094
HpyF10VI GCNNNNNNNGC 6 cut(s) 27, 170, 238, 247, 334, 370
HpyF3I CTNAG 4 cut(s) 550, 614, 951, 974
HpySE526I ACGT 3 cut(s) 99, 589, 1038
Hsp92II CATG 4 cut(s) 523, 629, 776, 848
HspAI GCGC 3 cut(s) 19, 104, 146
Kpn2I TCCGGA 1 cut(s) 880
LmnI GCTCC 5 cut(s) 220, 246, 502, 1063, 1120
Lsp1109I GCAGC 4 cut(s) 143, 421, 959, 1078
LweI GCATC 3 cut(s) 17, 273, 315
MaeI CTAG 2 cut(s) 572, 987
MaeII ACGT 3 cut(s) 99, 589, 1038
MaeIII GTNAC 5 cut(s) 427, 524, 562, 590, 1042
MbiI CCGCTC 1 cut(s) 215
MboII GAAGA 4 cut(s) 370, 508, 754, 1191
MfeI CAATTG 1 cut(s) 1018
MflI RGATCY 2 cut(s) 78, 759
MhlI GDGCHC 7 cut(s) 118, 477, 499, 820, 854, 994, 1060
MluCI AATT 8 cut(s) 508, 603, 609, 639, 1018, 1063, 1126, 1136
MlyI GAGTC 4 cut(s) 243, 640, 763, 985
MroI TCCGGA 1 cut(s) 880
MroXI GAANNNNTTC 1 cut(s) 707
MseI TTAA 2 cut(s) 746, 957
MslI CAYNNNNRTG 2 cut(s) 281, 966
MspA1I CMGCKG 1 cut(s) 164
MspI CCGG 5 cut(s) 5, 229, 413, 425, 881
MspR9I CCNGG 1 cut(s) 1028
MunI CAATTG 1 cut(s) 1018
MvaI CCWGG 1 cut(s) 1028
MvnI CGCG 2 cut(s) 104, 146
MwoI GCNNNNNNNGC 6 cut(s) 27, 170, 238, 247, 334, 370
NlaIII CATG 4 cut(s) 523, 629, 776, 848
NlaIV GGNNCC 3 cut(s) 840, 852, 1025
NmuCI GTSAC 3 cut(s) 427, 524, 562
PaeR7I CTCGAG 2 cut(s) 912, 1100
PagI TCATGA 2 cut(s) 625, 844
PcsI WCGNNNNNNNCGW 2 cut(s) 174, 287
PdmI GAANNNNTTC 1 cut(s) 707
PkrI GCNGC 9 cut(s) 108, 133, 150, 288, 411, 440, 491, 949, 1093
PleI GAGTC 4 cut(s) 242, 639, 762, 984
PpsI GAGTC 4 cut(s) 242, 639, 762, 984
Psp124BI GAGCTC 2 cut(s) 477, 994
Psp1406I AACGTT 1 cut(s) 1038
Psp6I CCWGG 1 cut(s) 1026
PspEI GGTNACC 1 cut(s) 427
PspFI CCCAGC 2 cut(s) 127, 1144
PspGI CCWGG 1 cut(s) 1026
PspN4I GGNNCC 3 cut(s) 840, 852, 1025
PspOMI GGGCCC 1 cut(s) 850
PspPI GGNCC 4 cut(s) 304, 577, 850, 851
PspXI VCTCGAGB 1 cut(s) 912
PsuI RGATCY 2 cut(s) 78, 759
RsaI GTAC 1 cut(s) 588
RsaNI GTAC 1 cut(s) 587
RseI CAYNNNNRTG 2 cut(s) 281, 966
SacI GAGCTC 2 cut(s) 477, 994
SaqAI TTAA 2 cut(s) 746, 957
SatI GCNGC 9 cut(s) 107, 132, 149, 287, 410, 439, 490, 948, 1092
Sau96I GGNCC 4 cut(s) 304, 577, 850, 851
SchI GAGTC 4 cut(s) 243, 640, 763, 985
ScrFI CCNGG 1 cut(s) 1028
SduI GDGCHC 7 cut(s) 118, 477, 499, 820, 854, 994, 1060
SfaNI GCATC 3 cut(s) 17, 273, 315
Sfr274I CTCGAG 2 cut(s) 912, 1100
SinI GGWCC 1 cut(s) 304
SlaI CTCGAG 2 cut(s) 912, 1100
SmiMI CAYNNNNRTG 2 cut(s) 281, 966
SmlI CTYRAG 3 cut(s) 645, 912, 1100
SmoI CTYRAG 3 cut(s) 645, 912, 1100
Sse9I AATT 8 cut(s) 508, 603, 609, 639, 1018, 1063, 1126, 1136
SspI AATATT 1 cut(s) 811
SspMI CTAG 2 cut(s) 572, 987
SstI GAGCTC 2 cut(s) 477, 994
StyD4I CCNGG 1 cut(s) 1026
TaaI ACNGT 4 cut(s) 308, 433, 562, 1048
TaiI ACGT 3 cut(s) 102, 592, 1041
TasI AATT 8 cut(s) 508, 603, 609, 639, 1018, 1063, 1126, 1136
TauI GCSGC 5 cut(s) 109, 151, 289, 441, 492
Tru1I TTAA 2 cut(s) 746, 957
Tru9I TTAA 2 cut(s) 746, 957
TscAI CASTG 4 cut(s) 98, 335, 499, 558
TseFI GTSAC 3 cut(s) 427, 524, 562
TseI GCWGC 4 cut(s) 131, 409, 947, 1091
Tsp45I GTSAC 3 cut(s) 427, 524, 562
TspDTI ATGAA 2 cut(s) 195, 508
TspGWI ACGGA 1 cut(s) 359
TspRI CASTG 4 cut(s) 98, 335, 499, 558
VpaK11BI GGWCC 1 cut(s) 304
XagI CCTNNNNNAGG 1 cut(s) 392
XapI RAATTY 1 cut(s) 1126
XbaI TCTAGA 1 cut(s) 986
XhoI CTCGAG 2 cut(s) 912, 1100
XmiI GTMKAC 1 cut(s) 926
XmnI GAANNNNTTC 1 cut(s) 707
XspI CTAG 2 cut(s) 572, 987
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.