AT1G59830

serine threonine-protein phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0003085
Physical Location & Seq
Reverse (-)
22020377 .. 22022503
2127 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G59830.1

Sequence Viewer

Length: 921 bp
ATGCCGTTAAACGGAGATCTCGACCGTCAGATCGAACAGCTAATGGAGTGTAAGCCGTTAGGTGAAGCAGACGTGAAGATCCTTTGCGATCAAGCTAAAGCGATTCTTGTTGAGGAATATAATGTTCAACCGGTTAAGTGTCCGGTTACGGTATGCGGCGATATCCATGGCCAGTTTTATGACCTAATTGAGCTATTTCGTATTGGTGGTAATGCTCCTGATACTAATTACCTCTTCATGGGAGATTATGTAGATCGTGGCTACTATTCTGTAGAAACAGTCTCTCTATTGGTGGCATTAAAGGTGCGTTACAGGGACAGACTTACGATCCTGCGAGGGAATCATGAGAGCCGTCAGATTACACAAGTCTATGGTTTTTATGACGAATGCTTGAGGAAATACGGAAATGCAAATGTGTGGAAGTATTTTACGGACCTTTTCGATTATCTCCCTCTTACAGCACTCATAGAGAGTCAGGTTTTCTGTTTGCATGGAGGCCTTTCACCTTCTCTGGATACTCTTGACAATATCCGAAGCTTGGATCGAATACAAGAGGTTCCACACGAAGGACCAATGTGCGATCTACTCTGGTCTGATCCCGACGATCGTTGTGGATGGGGAATATCTCCTCGTGGTGCTGGTTACACGTTTGGACAGGACATTGCTACTCAGTTTAATCATAACAATGGACTGAGTCTGATCTCAAGAGCGCATCAACTTGTAATGGAAGGCTATAATTGGTGTCAGGAAAAGAACGTAGTGACAGTGTTTAGTGCACCGAACTACTGTTACAGATGTGGAAACATGGCCGCAATTCTTGAGATTGGAGAAAAGATGGAACAGAACTTCCTTCAATTCGATCCAGCACCTAGACAAGTCGAACCCGATACCACGCGCAAGACCCCTGATTATTTTTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005777 GO:0005829 GO:0005886 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0008104 GO:0008150 GO:0008152 GO:0009657 GO:0009658 GO:0009787 GO:0009788 GO:0009893 GO:0009894 GO:0009896 GO:0009902 GO:0009903 GO:0009966 GO:0009968 GO:0009987 GO:0010565 GO:0010646 GO:0010648 GO:0010817 GO:0016020 GO:0016043 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019216 GO:0019217 GO:0019222 GO:0019538 GO:0019750 GO:0023051 GO:0023057 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031998 GO:0032000 GO:0032879 GO:0033036 GO:0034613 GO:0036211 GO:0042578 GO:0042579 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045834 GO:0045923 GO:0046320 GO:0046321 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050994 GO:0050996 GO:0051049 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051644 GO:0051649 GO:0051656 GO:0051667 GO:0062012 GO:0062013 GO:0065007 GO:0065008 GO:0070727 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1905957 GO:1905958 GO:2000012
KEGG Pathways
Metabolic & Signaling
ko03015 ko04013 ko04071 ko04111 ko04113 ko04114 ko04136 ko04138 ko04140 ko04151 ko04152 ko04261 ko04350 ko04390 ko04391 ko04530 ko04728 ko04730 ko05142 ko05160 ko05165 map03015 map04013 map04071 map04111 map04113 map04114 map04136 map04138 map04140 map04151 map04152 map04261 map04350 map04390 map04391 map04530 map04728 map04730 map05142 map05160 map05165
Pfam Domains
Protein Families
Metallophos

Protein Analysis

306

Amino Acids

34.96

Weight (kDa)

4.79

Isoelectric Point (pI)

39.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 48 - 241 2.2e-46 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 895
AciI CCGC 2 cut(s) 156, 810
AclWI GGATC 5 cut(s) 73, 322, 549, 590, 854
AcoI YGGCCR 2 cut(s) 169, 807
AfiI CCNNNNNNNGG 4 cut(s) 11, 238, 538, 566
AflIII ACRYGT 1 cut(s) 645
AgeI ACCGGT 1 cut(s) 130
AgsI TTSAA 2 cut(s) 128, 854
AjiI CACGTC 1 cut(s) 73
AloI GAACNNNNNNTCC 2 cut(s) 831, 863
AluBI AGCT 4 cut(s) 40, 95, 193, 537
AluI AGCT 4 cut(s) 40, 95, 193, 537
Alw21I GWGCWC 1 cut(s) 778
Alw26I GTCTC 1 cut(s) 286
Alw44I GTGCAC 1 cut(s) 774
AlwI GGATC 5 cut(s) 73, 322, 549, 590, 854
AoxI GGCC 3 cut(s) 169, 496, 807
ApaLI GTGCAC 1 cut(s) 774
AsiGI ACCGGT 1 cut(s) 130
AspLEI GCGC 2 cut(s) 712, 897
AspS9I GGNCC 2 cut(s) 433, 569
AsuHPI GGTGA 2 cut(s) 74, 495
AvaII GGWCC 2 cut(s) 433, 569
BaeGI GKGCMC 1 cut(s) 778
BalI TGGCCA 1 cut(s) 171
BauI CACGAG 1 cut(s) 630
Bbv12I GWGCWC 1 cut(s) 778
BccI CCATC 2 cut(s) 609, 829
BceAI ACGGC 2 cut(s) 40, 336
BciVI GTATCC 1 cut(s) 508
BcoDI GTCTC 1 cut(s) 286
BfaI CTAG 1 cut(s) 870
BfmI CTRYAG 1 cut(s) 270
BfuI GTATCC 1 cut(s) 508
BglII AGATCT 1 cut(s) 16
BisI GCNGC 2 cut(s) 157, 810
BlsI GCNGC 2 cut(s) 158, 811
Bme18I GGWCC 2 cut(s) 433, 569
BmgBI CACGTC 1 cut(s) 73
BmgT120I GGNCC 2 cut(s) 433, 569
BmiI GGNNCC 1 cut(s) 558
BmsI GCATC 1 cut(s) 721
BpuEI CTTGAG 3 cut(s) 412, 688, 839
BsaJI CCNNGG 1 cut(s) 166
BsaWI WCCGGW 2 cut(s) 130, 142
BsaXI ACNNNNNCTCC 2 cut(s) 234, 264
Bsc4I CCNNNNNNNGG 4 cut(s) 11, 238, 538, 566
Bse118I RCCGGY 1 cut(s) 130
Bse1I ACTGG 1 cut(s) 172
Bse3DI GCAATG 1 cut(s) 660
BseDI CCNNGG 1 cut(s) 166
BseGI GGATG 1 cut(s) 620
BseLI CCNNNNNNNGG 4 cut(s) 11, 238, 538, 566
BseMI GCAATG 1 cut(s) 660
BseMII CTCAG 2 cut(s) 683, 683
BseNI ACTGG 1 cut(s) 172
BseRI GAGGAG 1 cut(s) 618
BseSI GKGCMC 1 cut(s) 778
Bsh1236I CGCG 1 cut(s) 895
Bsh1285I CGRYCG 2 cut(s) 25, 607
BshFI GGCC 3 cut(s) 171, 498, 809
BshTI ACCGGT 1 cut(s) 130
BsiEI CGRYCG 2 cut(s) 25, 607
BsiHKAI GWGCWC 1 cut(s) 778
BsiSI CCGG 2 cut(s) 131, 143
BslFI GGGAC 1 cut(s) 329
BslI CCNNNNNNNGG 4 cut(s) 11, 238, 538, 566
BsmAI GTCTC 1 cut(s) 286
BsmFI GGGAC 1 cut(s) 329
BsmI GAATGC 1 cut(s) 392
BsnI GGCC 3 cut(s) 171, 498, 809
Bsp1286I GDGCHC 1 cut(s) 778
Bsp19I CCATGG 1 cut(s) 166
BspACI CCGC 2 cut(s) 156, 810
BspANI GGCC 3 cut(s) 171, 498, 809
BspCNI CTCAG 2 cut(s) 682, 684
BspFNI CGCG 1 cut(s) 895
BspHI TCATGA 1 cut(s) 343
BspLI GGNNCC 1 cut(s) 558
BspPI GGATC 5 cut(s) 73, 322, 549, 590, 854
BsrDI GCAATG 1 cut(s) 660
BsrFI RCCGGY 1 cut(s) 130
BsrI ACTGG 1 cut(s) 172
BssAI RCCGGY 1 cut(s) 130
BssECI CCNNGG 1 cut(s) 166
BssSI CACGAG 1 cut(s) 630
BssT1I CCWWGG 1 cut(s) 166
Bst2BI CACGAG 1 cut(s) 630
Bst4CI ACNGT 5 cut(s) 26, 151, 280, 766, 788
Bst6I CTCTTC 1 cut(s) 239
BstDEI CTNAG 2 cut(s) 669, 692
BstDSI CCRYGG 1 cut(s) 166
BstF5I GGATG 1 cut(s) 620
BstFNI CGCG 1 cut(s) 895
BstHHI GCGC 2 cut(s) 712, 897
BstMAI GTCTC 1 cut(s) 286
BstMCI CGRYCG 2 cut(s) 25, 607
BstSFI CTRYAG 1 cut(s) 270
BstSLI GKGCMC 1 cut(s) 778
BstUI CGCG 1 cut(s) 895
BstX2I RGATCY 2 cut(s) 16, 78
BstYI RGATCY 2 cut(s) 16, 78
BsuI GTATCC 1 cut(s) 508
BsuRI GGCC 3 cut(s) 171, 498, 809
BtgI CCRYGG 1 cut(s) 166
BtrI CACGTC 1 cut(s) 73
BtsCI GGATG 1 cut(s) 620
BtsIMutI CAGTG 1 cut(s) 771
CciI TCATGA 1 cut(s) 343
CfoI GCGC 2 cut(s) 712, 897
Cfr10I RCCGGY 1 cut(s) 130
Cfr13I GGNCC 2 cut(s) 433, 569
CspAI ACCGGT 1 cut(s) 130
CviAII CATG 5 cut(s) 167, 238, 344, 491, 805
DdeI CTNAG 2 cut(s) 669, 692
EaeI YGGCCR 2 cut(s) 169, 807
Eam1104I CTCTTC 1 cut(s) 239
EarI CTCTTC 1 cut(s) 239
Eco130I CCWWGG 1 cut(s) 166
Eco147I AGGCCT 1 cut(s) 498
Eco32I GATATC 1 cut(s) 163
Eco47I GGWCC 2 cut(s) 433, 569
EcoRV GATATC 1 cut(s) 163
EcoT14I CCWWGG 1 cut(s) 166
ErhI CCWWGG 1 cut(s) 166
FaeI CATG 5 cut(s) 170, 241, 347, 494, 808
FalI AAGNNNNNCTT 2 cut(s) 90, 122
FaqI GGGAC 1 cut(s) 329
FatI CATG 5 cut(s) 166, 237, 343, 490, 804
Fnu4HI GCNGC 2 cut(s) 157, 810
FokI GGATG 1 cut(s) 627
Fsp4HI GCNGC 2 cut(s) 157, 810
FspBI CTAG 1 cut(s) 870
GlaI GCGC 2 cut(s) 711, 896
GluI GCNGC 2 cut(s) 157, 810
HaeIII GGCC 3 cut(s) 171, 498, 809
HapII CCGG 2 cut(s) 131, 143
HhaI GCGC 2 cut(s) 712, 897
Hin1II CATG 5 cut(s) 170, 241, 347, 494, 808
Hin6I GCGC 2 cut(s) 710, 895
HinP1I GCGC 2 cut(s) 710, 895
HindIII AAGCTT 1 cut(s) 535
HinfI GANTC 4 cut(s) 103, 340, 472, 694
HpaII CCGG 2 cut(s) 131, 143
HphI GGTGA 2 cut(s) 74, 495
Hpy166II GTNNAC 1 cut(s) 776
Hpy188I TCNGA 5 cut(s) 30, 357, 533, 595, 699
Hpy188III TCNNGA 9 cut(s) 20, 218, 344, 512, 521, 599, 705, 746, 818
Hpy8I GTNNAC 1 cut(s) 776
Hpy99I CGWCG 1 cut(s) 605
HpyAV CCTTC 4 cut(s) 516, 560, 722, 860
HpyCH4III ACNGT 5 cut(s) 26, 151, 280, 766, 788
HpyCH4IV ACGT 3 cut(s) 72, 647, 756
HpyCH4V TGCA 3 cut(s) 410, 490, 776
HpyF3I CTNAG 2 cut(s) 669, 692
HpySE526I ACGT 3 cut(s) 72, 647, 756
Hsp92II CATG 5 cut(s) 170, 241, 347, 494, 808
HspAI GCGC 2 cut(s) 710, 895
LmnI GCTCC 1 cut(s) 220
LweI GCATC 1 cut(s) 721
MaeI CTAG 1 cut(s) 870
MaeII ACGT 3 cut(s) 72, 647, 756
MaeIII GTNAC 5 cut(s) 145, 308, 641, 760, 788
MboII GAAGA 2 cut(s) 88, 226
MflI RGATCY 2 cut(s) 16, 78
MhlI GDGCHC 1 cut(s) 778
MlsI TGGCCA 1 cut(s) 171
MluCI AATT 5 cut(s) 186, 226, 736, 813, 854
MluNI TGGCCA 1 cut(s) 171
MlyI GAGTC 2 cut(s) 481, 703
MnlI CCTC 8 cut(s) 106, 242, 329, 387, 462, 488, 547, 639
Mox20I TGGCCA 1 cut(s) 171
MscI TGGCCA 1 cut(s) 171
MseI TTAA 4 cut(s) 8, 135, 299, 675
MslI CAYNNNNRTG 1 cut(s) 684
Msp20I TGGCCA 1 cut(s) 171
MspI CCGG 2 cut(s) 131, 143
Mva1269I GAATGC 1 cut(s) 392
MvnI CGCG 1 cut(s) 895
NcoI CCATGG 1 cut(s) 166
NlaIII CATG 5 cut(s) 170, 241, 347, 494, 808
NlaIV GGNNCC 1 cut(s) 558
NmuCI GTSAC 1 cut(s) 760
PagI TCATGA 1 cut(s) 343
PceI AGGCCT 1 cut(s) 498
PcsI WCGNNNNNNNCGW 1 cut(s) 18
PctI GAATGC 1 cut(s) 392
PfeI GAWTC 2 cut(s) 103, 340
PflFI GACNNNGTC 1 cut(s) 693
PinAI ACCGGT 1 cut(s) 130
PkrI GCNGC 2 cut(s) 158, 811
Ple19I CGATCG 1 cut(s) 607
PleI GAGTC 2 cut(s) 480, 702
PpsI GAGTC 2 cut(s) 480, 702
PspN4I GGNNCC 1 cut(s) 558
PspPI GGNCC 2 cut(s) 433, 569
PsrI GAACNNNNNNTAC 2 cut(s) 773, 805
PsuI RGATCY 2 cut(s) 16, 78
PsyI GACNNNGTC 1 cut(s) 693
PvuI CGATCG 1 cut(s) 607
RseI CAYNNNNRTG 1 cut(s) 684
SaqAI TTAA 4 cut(s) 8, 135, 299, 675
SatI GCNGC 2 cut(s) 157, 810
Sau96I GGNCC 2 cut(s) 433, 569
SchI GAGTC 2 cut(s) 481, 703
SduI GDGCHC 1 cut(s) 778
SfaNI GCATC 1 cut(s) 721
SfcI CTRYAG 1 cut(s) 270
SinI GGWCC 2 cut(s) 433, 569
SmiMI CAYNNNNRTG 1 cut(s) 684
SmlI CTYRAG 3 cut(s) 391, 703, 818
SmoI CTYRAG 3 cut(s) 391, 703, 818
Sse9I AATT 5 cut(s) 186, 226, 736, 813, 854
SseBI AGGCCT 1 cut(s) 498
SsiI CCGC 2 cut(s) 156, 810
SspMI CTAG 1 cut(s) 870
StuI AGGCCT 1 cut(s) 498
StyI CCWWGG 1 cut(s) 166
TaaI ACNGT 5 cut(s) 26, 151, 280, 766, 788
TaiI ACGT 3 cut(s) 75, 650, 759
TaqI TCGA 6 cut(s) 21, 33, 441, 544, 858, 879
TasI AATT 5 cut(s) 186, 226, 736, 813, 854
TauI GCSGC 2 cut(s) 159, 812
TfiI GAWTC 2 cut(s) 103, 340
Tru1I TTAA 4 cut(s) 8, 135, 299, 675
Tru9I TTAA 4 cut(s) 8, 135, 299, 675
TscAI CASTG 1 cut(s) 771
TseFI GTSAC 1 cut(s) 760
Tsp45I GTSAC 1 cut(s) 760
TspDTI ATGAA 1 cut(s) 226
TspGWI ACGGA 3 cut(s) 27, 417, 446
TspRI CASTG 1 cut(s) 771
Tth111I GACNNNGTC 1 cut(s) 693
VneI GTGCAC 1 cut(s) 774
VpaK11BI GGWCC 2 cut(s) 433, 569
XspI CTAG 1 cut(s) 870
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.