Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0003085

Physical Location & Seq

Genomic Coordinates Forward (+)

52939926 .. 52942348

Gene Structure 2423 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0357300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1872 bp

ATGGCTCCGGTGGCTTTGTTCATGTACTCTGTTCTCAGTCATCTTCTAGTTCTTCACTACGTTGAGGGGATGAAAAAGTGTCCATCCTACTACTGCAATGACATGGTTGGCTATATTCATTTCCCTTTCAAAAGTAGTTCACATCCTCCTGAATGCGGGCTGTACACAGTCGATTGCTCCAACACTTCAAGTCCAAAGATCCAACTGAGAGAGGGAGGATACTGGCATGAATTTGATAGCATTTCTCAAACAAATTCGGTTCATATCAACGACAAAGAGCTAGTGAAGCCCTTGCCAATAGATTACTGCAATGATGAAATTCTCGATGATTTGAGTCTTCCCAGCCCTTCTCCACTCTTTGATCTATTGTTCACCAACAATCTGACCCTGTTCAAATGCAACACCTCCATGAAACCTCCTTATGCAGATCTTACCTTTGGCTGCATCAATACTAAGCATATTTATTATACTTTATACAATATAAGTACACCAAGTCCACCACCACCATGTTCAATCACTCAGATTCCCATATTTCCCAATCAATCTACTCTTTTACCATTGACTACTCAGTTCTCCCTTCAAGTGCAAGTAACCGGAGAGTGTTACCAGTGTTATGAAAAAAGAAAAGGCACATGCCAGGTTGTCGACGGAAAGTTTAAATGTTCTAGAGGCAAAAACTCGGGATTGAAGCTTGGATTAGGTATTGGAATTGGAGGTGCTGCACTTCTTGTGGGAGGCTTGTTTTTTCTGCTGGGAAAAAAACAAAAGCGTGTTTCTTTAAACTTCCTTTCAAGGAACATTTCTTCTCATCCCTACTCAAACTCAGACCTAGAAGGGGACAGCGCCTACTTTGGTGTTTCGGTCTTTGCCTACAGTGAACTTGAAGAAGCTACTAATCATTTTGATAGCAAAAAGGAACTTGGAGATGGGGGTTCTGGAACTGTATACCATGGCAAACTCAAAGATGGCCGAGAAGTTGCAGTCAAGCGCTTACACGAGCACAACTACAAACGTGAGGAACAGTTTATGAATGAAATTGAAATTATCACCCGCCTGCACCACAAAAATTTAGTAACCCTTTATGGCTGCACTTCACGCCGCAGCCATGAGCTCCTCCTTGTGTATGAATACATTCCCAATGGCACTGTTTCTGATCATCTCCATGGTGACCTAGCACACTGTGGTTTACTCACTTGGCCTATTCGTATGAGCATTGCCATAGAAACTGCCAATGCATTGTCTTACCTCCATGCTTCTGATATCCTGCATCGTGATGTGAAGACTAGCAACATTCTCCTTGATAACAATTTGCGCATAAAAGTTGCAGATTTTGGGCTCTCCCGGATTTTCCCCCTTGACATCACTCATGTCTCAACTGCTCCACAAGGGACACCTGGTTATGTTGACCCACAGTATCATCAATGTTACCAGCTAACTAGTAAGAGTGATGTTTATAGTTTTGGGGTTGTACTCATTGAGCTTATAACGTCTATGCCAGCAGTTGATATAACTAGGCAGCGGGATGAGATCAATTTATCTAACTTAGCAGTAAACAAGATTCAAAAAGGATTATACAATGAGCTGTTAGATTCATCTCTTGGATTTGAGTCAGATAATGAAGTTAAAAGGATGACAATTGCAGTAGCAGAGTTGGCATTTCAATGTTTGCAGCAGGACAACAACATGAGGCCTACCATGTGTGAGGTTTTGGAGACTTTGAAGTTAATTGAAAGCAGGAACAATGTTCCAGAGAGTTTAAAGGGGGCATTTGAAGATGCTGAGCTGAGAAGTATACAGCCACCACCTTTACCTAAATCCGTGACCCAAAAATGGCCTAGCACTGTGCCTACCGCATCTAATACAAGTCGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03015 ko04013 ko04071 ko04111 ko04113 ko04114 ko04136 ko04138 ko04140 ko04151 ko04152 ko04261 ko04350 ko04390 ko04391 ko04530 ko04728 ko04730 ko05142 ko05160 ko05165 map03015 map04013 map04071 map04111 map04113 map04114 map04136 map04138 map04140 map04151 map04152 map04261 map04350 map04390 map04391 map04530 map04728 map04730 map05142 map05160 map05165

Pfam Domains

Protein Families

Metallophos

Protein Analysis

623

Amino Acids

69.72

Weight (kDa)

6.27

Isoelectric Point (pI)

44.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	302 - 571	7.4e-49	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	303 - 573	3.4e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003085)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10430 AT1G10430 AT1G59830 AT1G59830 AT1G69960
fragaria_vesca	FvH4_4g35390 FvH4_5g16000
malus_domestica	MD06G1183800.v1.1 MD13G1083600.v1.1 MD14G1189900.v1.1 MD16G1083000.v1.1
prunus_persica	Prupe.1G263000_v2.0.a1 Prupe.5G182500_v2.0.a1
pyrus_communis	pycom06g16290 pycom14g15750 pycom16g07190
rosa_chinensis	RchiOBHm_Chr4g0445001 RchiOBHm_Chr7g0180071
rosa_laevigata	RLG00000005297 RLG00000005778
rosa_multiflora	Rmu_sc0017616.1_g000002 Rmu_ssc0000119.1_g000027 Rmu_ssc0000285.1_g000001
rosa_roxburghii	Rroxscaffold_3G00273150 Rroxscaffold_5G00385510
rosa_rugosa	Rorug04G0357300 Rorug06G0430300
rosa_samantha	Rh4AG419100 Rh4BG430800 Rh4CG445100 Rh4DG426700 Rh7AG030600 Rh7BG030500 Rh7CG032300 Rh7DG031300
rosa_wichuraiana	Rw4G035880 Rw7G002550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1484
Acc16I	TGCGCA	1 cut(s)	1313
AccI	GTMKAC	3 cut(s)	645, 945, 1792
AciI	CCGC	5 cut(s)	156, 1051, 1099, 1519, 1851
AclWI	GGATC	1 cut(s)	193
AcoI	YGGCCR	1 cut(s)	967
AcsI	RAATTY	4 cut(s)	230, 253, 318, 1066
AdeI	CACNNNGTG	1 cut(s)	1181
AfaI	GTAC	4 cut(s)	26, 164, 487, 1470
AfeI	AGCGCT	1 cut(s)	989
AfiI	CCNNNNNNNGG	3 cut(s)	155, 835, 1830
AhlI	ACTAGT	1 cut(s)	1436
AjnI	CCWGG	2 cut(s)	636, 1393
AluBI	AGCT	8 cut(s)	280, 691, 890, 1111, 1432, 1480, 1582, 1783
AluI	AGCT	8 cut(s)	280, 691, 890, 1111, 1432, 1480, 1582, 1783
Alw21I	GWGCWC	2 cut(s)	1002, 1113
Alw26I	GTCTC	2 cut(s)	1375, 1706
AlwI	GGATC	1 cut(s)	193
Ama87I	CYCGRG	1 cut(s)	679
Aor51HI	AGCGCT	1 cut(s)	989
AoxI	GGCC	4 cut(s)	967, 1196, 1688, 1832
ApeKI	GCWGC	6 cut(s)	441, 719, 1086, 1101, 1516, 1669
ApoI	RAATTY	4 cut(s)	230, 253, 318, 1066
Asp700I	GAANNNNTTC	1 cut(s)	1131
AspLEI	GCGC	3 cut(s)	845, 990, 1314
AsuC2I	CCSGG	1 cut(s)	1342
AsuHPI	GGTGA	3 cut(s)	364, 1039, 1178
AvaI	CYCGRG	1 cut(s)	679
BanII	GRGCYC	2 cut(s)	1113, 1338
BauI	CACGAG	1 cut(s)	995
BbsI	GAAGAC	2 cut(s)	329, 1286
Bbv12I	GWGCWC	2 cut(s)	1002, 1113
BbvI	GCAGC	6 cut(s)	428, 706, 1073, 1113, 1528, 1681
BccI	CCATC	3 cut(s)	91, 920, 959
BciT130I	CCWGG	2 cut(s)	638, 1395
BciVI	GTATCC	1 cut(s)	212
BclI	TGATCA	1 cut(s)	1153
BcnI	CCSGG	1 cut(s)	1342
BcoDI	GTCTC	2 cut(s)	1375, 1706
BcuI	ACTAGT	1 cut(s)	1436
BfaI	CTAG	9 cut(s)	47, 281, 666, 830, 1172, 1284, 1437, 1512, 1836
BfmI	CTRYAG	1 cut(s)	871
BfoI	RGCGCY	2 cut(s)	846, 991
BfuI	GTATCC	1 cut(s)	212
BglII	AGATCT	1 cut(s)	427
BisI	GCNGC	7 cut(s)	442, 720, 1087, 1099, 1102, 1517, 1670
BlpI	GCTNAGC	1 cut(s)	1779
BlsI	GCNGC	7 cut(s)	443, 721, 1088, 1100, 1103, 1518, 1671
Bme1390I	CCNGG	3 cut(s)	638, 1342, 1395
BmeT110I	CYCGRG	1 cut(s)	679
BmiI	GGNNCC	1 cut(s)	6
BmrFI	CCNGG	3 cut(s)	638, 1342, 1395
BmsI	GCATC	4 cut(s)	453, 1276, 1765, 1862
BpiI	GAAGAC	2 cut(s)	329, 1286
Bpu1102I	GCTNAGC	1 cut(s)	1779
BpuMI	CCSGG	1 cut(s)	1342
BsaJI	CCNNGG	2 cut(s)	949, 1162
BsaWI	WCCGGW	2 cut(s)	7, 593
Bsc4I	CCNNNNNNNGG	3 cut(s)	155, 835, 1830
Bse1I	ACTGG	2 cut(s)	227, 607
Bse3DI	GCAATG	3 cut(s)	103, 316, 1212
BseBI	CCWGG	2 cut(s)	638, 1395
BseDI	CCNNGG	2 cut(s)	949, 1162
BseGI	GGATG	6 cut(s)	75, 83, 142, 808, 1528, 1635
BseLI	CCNNNNNNNGG	3 cut(s)	155, 835, 1830
BseMI	GCAATG	3 cut(s)	103, 316, 1212
BseMII	CTCAG	7 cut(s)	49, 197, 533, 581, 837, 1770, 1775
BseNI	ACTGG	2 cut(s)	227, 607
BseRI	GAGGAG	1 cut(s)	1103
BseXI	GCAGC	6 cut(s)	428, 706, 1073, 1113, 1528, 1681
BseYI	CCCAGC	2 cut(s)	341, 751
BsgI	GTGCAG	3 cut(s)	705, 1040, 1072
BshFI	GGCC	4 cut(s)	969, 1198, 1690, 1834
BsiHKAI	GWGCWC	2 cut(s)	1002, 1113
BsiHKCI	CYCGRG	1 cut(s)	679
BsiSI	CCGG	3 cut(s)	8, 594, 1342
BslFI	GGGAC	2 cut(s)	851, 1402
BslI	CCNNNNNNNGG	3 cut(s)	155, 835, 1830
BsmAI	GTCTC	2 cut(s)	1375, 1706
BsmFI	GGGAC	2 cut(s)	851, 1402
BsmI	GAATGC	1 cut(s)	158
BsnI	GGCC	4 cut(s)	969, 1198, 1690, 1834
BsoBI	CYCGRG	1 cut(s)	679
Bsp1286I	GDGCHC	3 cut(s)	1002, 1113, 1338
Bsp1407I	TGTACA	1 cut(s)	162
Bsp143I	GATC	5 cut(s)	198, 361, 427, 1153, 1527
Bsp1720I	GCTNAGC	1 cut(s)	1779
Bsp19I	CCATGG	2 cut(s)	949, 1162
BspACI	CCGC	5 cut(s)	156, 1051, 1099, 1519, 1851
BspANI	GGCC	4 cut(s)	969, 1198, 1690, 1834
BspCNI	CTCAG	7 cut(s)	48, 198, 532, 580, 836, 1771, 1776
BspLI	GGNNCC	1 cut(s)	6
BspPI	GGATC	1 cut(s)	193
BsrDI	GCAATG	3 cut(s)	103, 316, 1212
BsrGI	TGTACA	1 cut(s)	162
BsrI	ACTGG	2 cut(s)	227, 607
BssECI	CCNNGG	2 cut(s)	949, 1162
BssMI	GATC	5 cut(s)	198, 361, 427, 1153, 1527
BssNAI	GTATAC	2 cut(s)	946, 1793
BssSI	CACGAG	1 cut(s)	995
BssT1I	CCWWGG	2 cut(s)	949, 1162
Bst1107I	GTATAC	2 cut(s)	946, 1793
Bst2BI	CACGAG	1 cut(s)	995
Bst2UI	CCWGG	2 cut(s)	638, 1395
Bst4CI	ACNGT	8 cut(s)	169, 875, 943, 1023, 1147, 1181, 1413, 1843
BstAUI	TGTACA	1 cut(s)	162
BstC8I	GCNNGC	3 cut(s)	158, 1055, 1497
BstDEI	CTNAG	9 cut(s)	35, 206, 453, 519, 567, 823, 1543, 1779, 1784
BstDSI	CCRYGG	2 cut(s)	949, 1162
BstEII	GGTNACC	1 cut(s)	1166
BstF5I	GGATG	6 cut(s)	75, 83, 142, 808, 1528, 1635
BstH2I	RGCGCY	2 cut(s)	846, 991
BstHHI	GCGC	3 cut(s)	845, 990, 1314
BstKTI	GATC	5 cut(s)	201, 364, 430, 1156, 1530
BstMAI	GTCTC	2 cut(s)	1375, 1706
BstMBI	GATC	5 cut(s)	198, 361, 427, 1153, 1527
BstMWI	GCNNNNNNNGC	4 cut(s)	11, 286, 1095, 1652
BstNI	CCWGG	2 cut(s)	638, 1395
BstNSI	RCATGY	1 cut(s)	636
BstPI	GGTNACC	1 cut(s)	1166
BstSCI	CCNGG	3 cut(s)	636, 1340, 1393
BstSFI	CTRYAG	1 cut(s)	871
BstV1I	GCAGC	6 cut(s)	428, 706, 1073, 1113, 1528, 1681
BstV2I	GAAGAC	2 cut(s)	329, 1286
BstX2I	RGATCY	2 cut(s)	198, 427
BstYI	RGATCY	2 cut(s)	198, 427
BstZ17I	GTATAC	2 cut(s)	946, 1793
BsuI	GTATCC	1 cut(s)	212
BsuRI	GGCC	4 cut(s)	969, 1198, 1690, 1834
BtgI	CCRYGG	2 cut(s)	949, 1162
BtsCI	GGATG	6 cut(s)	75, 83, 142, 808, 1528, 1635
BtsIMutI	CAGTG	5 cut(s)	614, 880, 1143, 1177, 1839
Cac8I	GCNNGC	3 cut(s)	158, 1055, 1497
CfoI	GCGC	3 cut(s)	845, 990, 1314
CsiI	ACCWGGT	1 cut(s)	1393
Csp6I	GTAC	4 cut(s)	25, 163, 486, 1469
CviQI	GTAC	4 cut(s)	25, 163, 486, 1469
DdeI	CTNAG	9 cut(s)	35, 206, 453, 519, 567, 823, 1543, 1779, 1784
DpnI	GATC	5 cut(s)	200, 363, 429, 1155, 1529
DpnII	GATC	5 cut(s)	198, 361, 427, 1153, 1527
DraI	TTTAAA	3 cut(s)	658, 780, 1758
DraIII	CACNNNGTG	1 cut(s)	1181
EaeI	YGGCCR	1 cut(s)	967
Ecl136II	GAGCTC	1 cut(s)	1111
Eco130I	CCWWGG	2 cut(s)	949, 1162
Eco147I	AGGCCT	1 cut(s)	1690
Eco24I	GRGCYC	2 cut(s)	1113, 1338
Eco32I	GATATC	1 cut(s)	1261
Eco47III	AGCGCT	1 cut(s)	989
Eco53kI	GAGCTC	1 cut(s)	1111
Eco88I	CYCGRG	1 cut(s)	679
Eco91I	GGTNACC	1 cut(s)	1166
EcoICRI	GAGCTC	1 cut(s)	1111
EcoO65I	GGTNACC	1 cut(s)	1166
EcoRII	CCWGG	2 cut(s)	636, 1393
EcoRV	GATATC	1 cut(s)	1261
EcoT14I	CCWWGG	2 cut(s)	949, 1162
EcoT22I	ATGCAT	1 cut(s)	1237
EcoT38I	GRGCYC	2 cut(s)	1113, 1338
ErhI	CCWWGG	2 cut(s)	949, 1162
FaqI	GGGAC	2 cut(s)	851, 1402
FauI	CCCGC	3 cut(s)	149, 1058, 1512
FbaI	TGATCA	1 cut(s)	1153
FblI	GTMKAC	3 cut(s)	645, 945, 1792
Fnu4HI	GCNGC	7 cut(s)	442, 720, 1087, 1099, 1102, 1517, 1670
FokI	GGATG	6 cut(s)	70, 82, 129, 795, 1535, 1642
FriOI	GRGCYC	2 cut(s)	1113, 1338
Fsp4HI	GCNGC	7 cut(s)	442, 720, 1087, 1099, 1102, 1517, 1670
FspBI	CTAG	9 cut(s)	47, 281, 666, 830, 1172, 1284, 1437, 1512, 1836
FspI	TGCGCA	1 cut(s)	1313
GlaI	GCGC	3 cut(s)	844, 989, 1313
GluI	GCNGC	7 cut(s)	442, 720, 1087, 1099, 1102, 1517, 1670
GsaI	CCCAGC	2 cut(s)	345, 755
HaeII	RGCGCY	2 cut(s)	846, 991
HaeIII	GGCC	4 cut(s)	969, 1198, 1690, 1834
HapII	CCGG	3 cut(s)	8, 594, 1342
HhaI	GCGC	3 cut(s)	845, 990, 1314
Hin6I	GCGC	3 cut(s)	843, 988, 1312
HinP1I	GCGC	3 cut(s)	843, 988, 1312
HincII	GTYRAC	2 cut(s)	646, 1405
HindII	GTYRAC	2 cut(s)	646, 1405
HindIII	AAGCTT	1 cut(s)	689
HinfI	GANTC	5 cut(s)	334, 523, 1558, 1589, 1607
HpaII	CCGG	3 cut(s)	8, 594, 1342
HphI	GGTGA	3 cut(s)	364, 1039, 1178
Hpy188I	TCNGA	6 cut(s)	384, 522, 826, 1153, 1258, 1612
Hpy188III	TCNNGA	7 cut(s)	149, 323, 666, 681, 936, 1271, 1748
Hpy99I	CGWCG	1 cut(s)	650
HpyAV	CCTTC	3 cut(s)	357, 587, 827
HpyCH4III	ACNGT	8 cut(s)	169, 875, 943, 1023, 1147, 1181, 1413, 1843
HpyCH4IV	ACGT	3 cut(s)	60, 1012, 1487
HpyF10VI	GCNNNNNNNGC	4 cut(s)	11, 286, 1095, 1652
HpyF3I	CTNAG	9 cut(s)	35, 206, 453, 519, 567, 823, 1543, 1779, 1784
HpySE526I	ACGT	3 cut(s)	60, 1012, 1487
HspAI	GCGC	3 cut(s)	843, 988, 1312
Ksp22I	TGATCA	1 cut(s)	1153
Kzo9I	GATC	5 cut(s)	198, 361, 427, 1153, 1527
LmnI	GCTCC	4 cut(s)	10, 182, 1116, 1384
Lsp1109I	GCAGC	6 cut(s)	428, 706, 1073, 1113, 1528, 1681
LweI	GCATC	4 cut(s)	453, 1276, 1765, 1862
MabI	ACCWGGT	1 cut(s)	1393
MaeI	CTAG	9 cut(s)	47, 281, 666, 830, 1172, 1284, 1437, 1512, 1836
MaeII	ACGT	3 cut(s)	60, 1012, 1487
MaeIII	GTNAC	6 cut(s)	589, 602, 1072, 1166, 1424, 1819
MalI	GATC	5 cut(s)	200, 363, 429, 1155, 1529
MboI	GATC	5 cut(s)	198, 361, 427, 1153, 1527
MboII	GAAGA	7 cut(s)	35, 44, 329, 795, 896, 1291, 1784
MfeI	CAATTG	1 cut(s)	1635
MflI	RGATCY	2 cut(s)	198, 427
MhlI	GDGCHC	3 cut(s)	1002, 1113, 1338
MlyI	GAGTC	2 cut(s)	343, 1616
MmeI	TCCRAC	2 cut(s)	204, 226
Mph1103I	ATGCAT	1 cut(s)	1237
MroXI	GAANNNNTTC	1 cut(s)	1131
MseI	TTAA	5 cut(s)	657, 779, 1623, 1724, 1757
MslI	CAYNNNNRTG	5 cut(s)	407, 505, 1161, 1272, 1660
MspA1I	CMGCKG	1 cut(s)	1519
MspI	CCGG	3 cut(s)	8, 594, 1342
MspR9I	CCNGG	3 cut(s)	638, 1342, 1395
MunI	CAATTG	1 cut(s)	1635
Mva1269I	GAATGC	1 cut(s)	158
MvaI	CCWGG	2 cut(s)	638, 1395
MwoI	GCNNNNNNNGC	4 cut(s)	11, 286, 1095, 1652
NciI	CCSGG	1 cut(s)	1342
NcoI	CCATGG	2 cut(s)	949, 1162
NdeII	GATC	5 cut(s)	198, 361, 427, 1153, 1527
NlaIV	GGNNCC	1 cut(s)	6
NmeAIII	GCCGAG	1 cut(s)	995
NmuCI	GTSAC	2 cut(s)	1166, 1819
NsbI	TGCGCA	1 cut(s)	1313
NsiI	ATGCAT	1 cut(s)	1237
NspI	RCATGY	1 cut(s)	636
PceI	AGGCCT	1 cut(s)	1690
PctI	GAATGC	1 cut(s)	158
PdmI	GAANNNNTTC	1 cut(s)	1131
PfeI	GAWTC	3 cut(s)	523, 1558, 1589
PfoI	TCCNGGA	1 cut(s)	1340
PkrI	GCNGC	7 cut(s)	443, 721, 1088, 1100, 1103, 1518, 1671
PleI	GAGTC	2 cut(s)	342, 1615
PpsI	GAGTC	2 cut(s)	342, 1615
PsiI	TTATAA	1 cut(s)	1484
Psp124BI	GAGCTC	1 cut(s)	1113
Psp6I	CCWGG	2 cut(s)	636, 1393
PspEI	GGTNACC	1 cut(s)	1166
PspFI	CCCAGC	2 cut(s)	341, 751
PspGI	CCWGG	2 cut(s)	636, 1393
PspN4I	GGNNCC	1 cut(s)	6
PsuI	RGATCY	2 cut(s)	198, 427
RsaI	GTAC	4 cut(s)	26, 164, 487, 1470
RsaNI	GTAC	4 cut(s)	25, 163, 486, 1469
RseI	CAYNNNNRTG	5 cut(s)	407, 505, 1161, 1272, 1660
SacI	GAGCTC	1 cut(s)	1113
SalI	GTCGAC	1 cut(s)	644
SaqAI	TTAA	5 cut(s)	657, 779, 1623, 1724, 1757
SatI	GCNGC	7 cut(s)	442, 720, 1087, 1099, 1102, 1517, 1670
Sau3AI	GATC	5 cut(s)	198, 361, 427, 1153, 1527
SchI	GAGTC	2 cut(s)	343, 1616
ScrFI	CCNGG	3 cut(s)	638, 1342, 1395
SduI	GDGCHC	3 cut(s)	1002, 1113, 1338
SexAI	ACCWGGT	1 cut(s)	1393
SfaNI	GCATC	4 cut(s)	453, 1276, 1765, 1862
SfcI	CTRYAG	1 cut(s)	871
SmiMI	CAYNNNNRTG	5 cut(s)	407, 505, 1161, 1272, 1660
SpeI	ACTAGT	1 cut(s)	1436
SseBI	AGGCCT	1 cut(s)	1690
SsiI	CCGC	5 cut(s)	156, 1051, 1099, 1519, 1851
SspMI	CTAG	9 cut(s)	47, 281, 666, 830, 1172, 1284, 1437, 1512, 1836
SstI	GAGCTC	1 cut(s)	1113
StuI	AGGCCT	1 cut(s)	1690
StyD4I	CCNGG	3 cut(s)	636, 1340, 1393
StyI	CCWWGG	2 cut(s)	949, 1162
TaaI	ACNGT	8 cut(s)	169, 875, 943, 1023, 1147, 1181, 1413, 1843
TaiI	ACGT	3 cut(s)	63, 1015, 1490
TaqI	TCGA	3 cut(s)	171, 324, 645
TaqII	GACCGA	1 cut(s)	850
TatI	WGTACW	4 cut(s)	24, 162, 485, 1468
TauI	GCSGC	1 cut(s)	1101
TfiI	GAWTC	3 cut(s)	523, 1558, 1589
Tru1I	TTAA	5 cut(s)	657, 779, 1623, 1724, 1757
Tru9I	TTAA	5 cut(s)	657, 779, 1623, 1724, 1757
TscAI	CASTG	5 cut(s)	614, 880, 1150, 1184, 1846
TseFI	GTSAC	2 cut(s)	1166, 1819
TseI	GCWGC	6 cut(s)	441, 719, 1086, 1101, 1516, 1669
Tsp45I	GTSAC	2 cut(s)	1166, 1819
TspGWI	ACGGA	2 cut(s)	663, 1807
TspRI	CASTG	5 cut(s)	614, 880, 1150, 1184, 1846
XapI	RAATTY	4 cut(s)	230, 253, 318, 1066
XbaI	TCTAGA	1 cut(s)	665
XceI	RCATGY	1 cut(s)	636
XmiI	GTMKAC	3 cut(s)	645, 945, 1792
XmnI	GAANNNNTTC	1 cut(s)	1131
XspI	CTAG	9 cut(s)	47, 281, 666, 830, 1172, 1284, 1437, 1512, 1836
Zsp2I	ATGCAT	1 cut(s)	1237

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.