AT1G17210

C3HC zinc finger-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0002807
Physical Location & Seq
Reverse (-)
5879996 .. 5884773
4778 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G17210.1

Sequence Viewer

Length: 2877 bp
ATGAAGGAAGAGGATGTGAGCTCGCAGAACGTAAACCCTAGAAGTAATCGGAACAGTGTAGCCTCAGCTTCTGCTTCCGCCTCTGCTACTCCCGTTGATAGGTTCCGACGACGTGCTAGATCGCCTTCTCCTCCTCAAACTGCTGCTGCTAGCTCTGCAGGGGCATCATCTCCAGCTGTTCTGGTAAACGCTGGCAGTGTTGACTGGACAGGTCATGGACTGGCATTATCAGTGCGTTCGTGTAGAACATGGGATAGAGGAGATTTACTTCGACGTCTTGCCACTTTCAAGCCTTCAAATTGGCTTGGGAAGCCCAAAACAGCTAGTTCTTTGGCTTGTGCTCAGAAAGGCTGGGTTAGTGTTGATCTGGACAAACTTCAATGTGAATACTGTGGGTCCATTCTACAATACTCCCCTCCACAAGATTCGTTGAATCCTCCCGAAGCTGATACCACCGGAGAAAAATTCTCTAAGCAGCTTGATGATGCACATGAGAGCTCTTGTCCTTGGGTAGGAAAAAGTTGTTCAGAAAGCTTAGTTCAGTTTCCTCCAACTCCTCCATCAGCCTTGATTGGAGGTTACAAGGATCGTTGTGATGGGCTCCTACAATTCTATTCTCTACCAATTGTTTCGCCATCTGCAATTGACCAGATGCGTGCTTCAAGACGACCACAAATTGACCGCCTTTTGGCACATGCCAATGATGATCTCAGTTTCAGAATGGACAATATATCAGCTGCAGAAACGTACAAAGAAGAGGCTTTCAGTAATTACTCTCGCGCTCAAAAGCTGATAAGCCTATGTGGATGGGAGCCTAGATGGCTTCCAAATATCCAAGATTGTGAAGAACATTCTGCCCAATCAGCTAGAAATGGGTGCCCTTCTGGACCGGCTAGAAATCAAAGTCGTCTGCAAGATCCTGGTCCAAGCAGGAAACAATTCTCGGCTTCATCCCGAAAAGCCTCTGGAAATTATGAAGTTTTGGGTCCAGAATATAAGTCAGAATCCAGATTACCTTTACTGGATTGTAGTTTATGTGGTGTAACCGTCAGAATTTGTGATTTCATGACCACTTCTCGGCCGGTTCCGTTTGCTGCTATAAATGCCAATCTTCCTGAAACGAGTAAGAAAATGGGAGTGACACGTGGCACTAGCGCAACAAGTGGAATCAATGGATGGTTTGCTAATGAAGGCATGGGACAGCAGCAAAATGAAGATGTTGACGAGGCTGAAACTTCAGTTAAGAGAAGATTAGTATCAAATGTAGGTCTAAGCTTTTATCAAAATGCAGCTGGTGCATCATCCTCTGCGCAGCTGAACATGTCTGTGACCCGTGATAATTACCAATTTAGTGATAGAGGAAAGGAAGTGTTGTGGAGGCAGCCTTCAGGAAGTGAGGTTGGTGATCGTGCTGCTTCATATGAATCACGAGGGCCTAGTACTCGTAAACGGAGCCTGGATGATGGTGGAAGCACTGTTGATAGGCCTTATCTACGAATACAACGTGCAGATAGTGTTGAAGGCACTGTTGTCGACCGTGACGGTGACGAGGTTAATGATGATTCAGCAGGGCCTTCAAAGCGTACCCGAGGTTCTGATGCGCATGAAGCTTATCCTTTCTTGTATGGGCGAGATTTATCAGTAGGGGGGCCAAGTCACTCACTGGATGCTGAAAACGAGAGGGAAGTAAATAGAAGTGACCCATTTAGTGAAGGAAATGAACAAGTTATGGCTTTTCCAGGTGCCAGAGACTCCACACGTGCTTCCTCTGTCATTGCAATGGATACAATTTGCCACAGTGCCAATGACGATTCTATGGAAAGTGTGGAAAACCATCCAGGGGATTTTGATGACATAAATTATCCCTCTGTGGCGACAGCTCAAAGTGCTGACTTCAATGATCCTTCGGAACTGAATTTCAGCAATCAAGCTCAGCAGAGTGCATGCTTCCAACCAGCTCCTGTTCGGTTTAATGCTGAACAAGGCATTAGCAGCATAAATGACGGTGAGGAAGTACTCAACACAGAGACTGTCACTGCCCAGGGAAGAGATGGACCAAGTTTAGGTGTCAGTGGGGGTAGTGTCGGAATGGGTGCAAGTCACGAGGCAGAAATACACGGAGCTGACGTTTCAGTCCATAGGGGAGATAGCGTTGTGGGAGACATGGAACCAGTTGCAGAAGTCATAGAGAATCTAGGACAAAGCGGTGAATTCGCACCAGACCAAGGCCTTACTGATGATTTTGTTCCTGCAGAAATGGATCGAGAAGGTAGGCTTGGGGATAGTCAAGATAGGGTGTCTCAGTCTGTTGTAAGGGCGGATAGTGGTTCTAAAATAGTTGATTCATTGAAGGCTGAATCTGTTGAAAGTGGTGAAAAGATGAGTAACATAAATGTGTTGATCAACGATGACAGTGTTCATCCATCTTTGTCTTGCAATGCGATAGTGTGTTCTGGTTATGAAGCATCTAAAGAAGAAGTGACCCAGACTTGGGAGTCTCCCCTCAACGCTGGCTTTGCACTCCCCGGATCTAGTTACACTGCCAATGATCAAGGGCCACAAAACGGAGACAGCAATGATGATATTGTGGAGTTTGATCCAATAAAGTATCATAACTGTTACTGTCCTTGGGTTAATGAAAATGTGGCTGCTGCTGGATGTAGCAGCAATAGCTCGGGTTCTTCAGGTTTTGCTGAGGCAGTTTGTGGGTGGCAACTAACTCTTGATGCCCTTGATTCGTTCCAGTCGCTTGAAAACCCTCAAAACCAGACAATGGAATCAGAATCAGCTGCATCTCTGTGCAAGGATGATCACCGAACTCCTTCCCAGAAGCTCTTGAAACGCCACTCTTTTATCAGCAGCCATGGGAAAAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C3HC

Protein Analysis

958

Amino Acids

103.09

Weight (kDa)

4.81

Isoelectric Point (pI)

51.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C3HC PF07967 84 - 209 1.7e-36 NuBaID N-terminal domain (aka zf-C3HC)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 2132, 2494
AatII GACGTC 1 cut(s) 277
Acc16I TGCGCA 2 cut(s) 1311, 1602
AccB1I GGYRCC 2 cut(s) 876, 1742
AccB7I CCANNNNNTGG 1 cut(s) 2773
AccI GTMKAC 1 cut(s) 1533
AccII CGCG 1 cut(s) 780
AciI CCGC 4 cut(s) 78, 682, 2205, 2318
AclWI GGATC 6 cut(s) 594, 911, 1895, 2268, 2536, 2591
AcoI YGGCCR 1 cut(s) 1079
AcsI RAATTY 4 cut(s) 464, 1053, 1915, 2210
AcuI CTGAAG 3 cut(s) 1221, 1371, 2667
AcvI CACGTG 2 cut(s) 1145, 1760
AcyI GRCGYC 1 cut(s) 274
AfaI GTAC 4 cut(s) 749, 1441, 1585, 2016
AflIII ACRYGT 3 cut(s) 1142, 1320, 1757
AjiI CACGTC 1 cut(s) 113
AjnI CCWGG 5 cut(s) 919, 1455, 1738, 1837, 2040
AjuI GAANNNNNNNTTGG 2 cut(s) 2259, 2291
Alw21I GWGCWC 3 cut(s) 23, 343, 500
Alw26I GTCTC 6 cut(s) 1743, 2021, 2154, 2304, 2502, 2562
AlwI GGATC 6 cut(s) 594, 911, 1895, 2268, 2536, 2591
AlwNI CAGNNNCTG 3 cut(s) 71, 1961, 2030
Ama87I CYCGRG 2 cut(s) 1587, 2674
AoxI GGCC 7 cut(s) 1079, 1433, 1484, 1571, 1649, 2227, 2555
ApoI RAATTY 4 cut(s) 464, 1053, 1915, 2210
Asp700I GAANNNNTTC 2 cut(s) 938, 2821
AspLEI GCGC 4 cut(s) 782, 1157, 1312, 1603
AspS9I GGNCC 9 cut(s) 396, 887, 923, 986, 1433, 1571, 1649, 2054, 2555
AsuC2I CCSGG 1 cut(s) 2526
AsuHPI GGTGA 6 cut(s) 1415, 1556, 2018, 2219, 2384, 2804
AsuNHI GCTAGC 1 cut(s) 149
AvaI CYCGRG 2 cut(s) 1587, 2674
AvaII GGWCC 5 cut(s) 396, 887, 923, 986, 2054
BaeGI GKGCMC 1 cut(s) 881
BanI GGYRCC 2 cut(s) 876, 1742
BanII GRGCYC 3 cut(s) 23, 500, 603
BauI CACGAG 2 cut(s) 1428, 2102
BbrPI CACGTG 2 cut(s) 1145, 1760
Bbv12I GWGCWC 3 cut(s) 23, 343, 500
BbvCI CCTCAGC 2 cut(s) 64, 2694
BcgI CGANNNNNNTGC 2 cut(s) 1513, 1547
BciT130I CCWGG 5 cut(s) 921, 1457, 1740, 1839, 2042
BciVI GTATCC 1 cut(s) 1777
BclI TGATCA 3 cut(s) 2400, 2548, 2809
BcnI CCSGG 1 cut(s) 2526
BcoDI GTCTC 6 cut(s) 1743, 2021, 2154, 2304, 2502, 2562
BfmI CTRYAG 3 cut(s) 156, 738, 2250
BfuI GTATCC 1 cut(s) 1777
BglI GCCNNNNNGGC 1 cut(s) 820
BlpI GCTNAGC 1 cut(s) 1932
BmcAI AGTACT 2 cut(s) 1441, 2016
Bme1390I CCNGG 6 cut(s) 921, 1457, 1740, 1839, 2042, 2526
Bme18I GGWCC 5 cut(s) 396, 887, 923, 986, 2054
BmeT110I CYCGRG 2 cut(s) 1587, 2674
BmgBI CACGTC 1 cut(s) 113
BmgT120I GGNCC 9 cut(s) 396, 887, 923, 986, 1433, 1571, 1649, 2054, 2555
BmrFI CCNGG 6 cut(s) 921, 1457, 1740, 1839, 2042, 2526
BmsI GCATC 9 cut(s) 173, 475, 642, 1307, 1588, 1657, 2474, 2716, 2801
BmtI GCTAGC 1 cut(s) 153
BpmI CTGGAG 1 cut(s) 156
Bpu10I CCTNAGC 2 cut(s) 64, 2694
Bpu1102I GCTNAGC 1 cut(s) 1932
BpuMI CCSGG 1 cut(s) 2526
BsaAI YACGTR 2 cut(s) 1145, 1760
BsaBI GATNNNNATC 1 cut(s) 1255
BsaHI GRCGYC 1 cut(s) 274
BsaJI CCNNGG 9 cut(s) 506, 1588, 1838, 2040, 2041, 2224, 2524, 2627, 2863
BsaWI WCCGGW 1 cut(s) 455
BsaXI ACNNNNNCTCC 4 cut(s) 2112, 2136, 2142, 2166
Bse118I RCCGGY 2 cut(s) 889, 1081
Bse1I ACTGG 6 cut(s) 209, 225, 1026, 1668, 2171, 2743
Bse3DI GCAATG 4 cut(s) 1773, 1785, 2443, 2581
Bse8I GATNNNNATC 1 cut(s) 1255
BseBI CCWGG 5 cut(s) 921, 1457, 1740, 1839, 2042
BseDI CCNNGG 9 cut(s) 506, 1588, 1838, 2040, 2041, 2224, 2524, 2627, 2863
BseJI GATNNNNATC 1 cut(s) 1255
BseMI GCAATG 4 cut(s) 1773, 1785, 2443, 2581
BseMII CTCAG 6 cut(s) 78, 356, 724, 1946, 2315, 2685
BseNI ACTGG 6 cut(s) 209, 225, 1026, 1668, 2171, 2743
BseRI GAGGAG 4 cut(s) 120, 123, 273, 546
BseSI GKGCMC 1 cut(s) 881
BseX3I CGGCCG 1 cut(s) 1079
BseYI CCCAGC 1 cut(s) 351
BsgI GTGCAG 1 cut(s) 1527
Bsh1236I CGCG 1 cut(s) 780
Bsh1285I CGRYCG 2 cut(s) 1082, 1537
BshFI GGCC 7 cut(s) 1081, 1435, 1486, 1573, 1651, 2229, 2557
BshNI GGYRCC 2 cut(s) 876, 1742
BsiEI CGRYCG 2 cut(s) 1082, 1537
BsiHKAI GWGCWC 3 cut(s) 23, 343, 500
BsiHKCI CYCGRG 2 cut(s) 1587, 2674
BsiSI CCGG 4 cut(s) 456, 890, 1082, 2526
BslFI GGGAC 1 cut(s) 1212
BsmAI GTCTC 6 cut(s) 1743, 2021, 2154, 2304, 2502, 2562
BsmFI GGGAC 1 cut(s) 1212
BsnI GGCC 7 cut(s) 1081, 1435, 1486, 1573, 1651, 2229, 2557
BsoBI CYCGRG 2 cut(s) 1587, 2674
Bsp1286I GDGCHC 5 cut(s) 23, 343, 500, 603, 881
Bsp1720I GCTNAGC 1 cut(s) 1932
Bsp19I CCATGG 1 cut(s) 2863
BspACI CCGC 4 cut(s) 78, 682, 2205, 2318
BspANI GGCC 7 cut(s) 1081, 1435, 1486, 1573, 1651, 2229, 2557
BspCNI CTCAG 6 cut(s) 77, 355, 723, 1945, 2314, 2686
BspFNI CGCG 1 cut(s) 780
BspHI TCATGA 1 cut(s) 1065
BspMAI CTGCAG 3 cut(s) 160, 742, 2254
BspOI GCTAGC 1 cut(s) 153
BspPI GGATC 6 cut(s) 594, 911, 1895, 2268, 2536, 2591
BspT107I GGYRCC 2 cut(s) 876, 1742
BsrDI GCAATG 4 cut(s) 1773, 1785, 2443, 2581
BsrFI RCCGGY 2 cut(s) 889, 1081
BsrI ACTGG 6 cut(s) 209, 225, 1026, 1668, 2171, 2743
BssAI RCCGGY 2 cut(s) 889, 1081
BssECI CCNNGG 9 cut(s) 506, 1588, 1838, 2040, 2041, 2224, 2524, 2627, 2863
BssNI GRCGYC 1 cut(s) 274
BssSI CACGAG 2 cut(s) 1428, 2102
BssT1I CCWWGG 4 cut(s) 506, 2224, 2627, 2863
Bst2BI CACGAG 2 cut(s) 1428, 2102
Bst2UI CCWGG 5 cut(s) 921, 1457, 1740, 1839, 2042
Bst6I CTCTTC 3 cut(s) 3, 750, 2041
BstACI GRCGYC 1 cut(s) 274
BstAPI GCANNNNNTGC 1 cut(s) 1295
BstBAI YACGTR 2 cut(s) 1145, 1760
BstC8I GCNNGC 6 cut(s) 23, 151, 193, 657, 1945, 2512
BstDEI CTNAG 9 cut(s) 64, 342, 471, 535, 710, 1271, 1932, 2301, 2694
BstDSI CCRYGG 1 cut(s) 2863
BstENI CCTNNNNNAGG 1 cut(s) 510
BstFNI CGCG 1 cut(s) 780
BstHHI GCGC 4 cut(s) 782, 1157, 1312, 1603
BstMAI GTCTC 6 cut(s) 1743, 2021, 2154, 2304, 2502, 2562
BstMCI CGRYCG 2 cut(s) 1082, 1537
BstNI CCWGG 5 cut(s) 921, 1457, 1740, 1839, 2042
BstNSI RCATGY 3 cut(s) 698, 1324, 1947
BstSCI CCNGG 6 cut(s) 919, 1455, 1738, 1837, 2040, 2524
BstSFI CTRYAG 3 cut(s) 156, 738, 2250
BstSLI GKGCMC 1 cut(s) 881
BstUI CGCG 1 cut(s) 780
BstX2I RGATCY 2 cut(s) 916, 2528
BstYI RGATCY 2 cut(s) 916, 2528
BstZI CGGCCG 1 cut(s) 1079
BsuI GTATCC 1 cut(s) 1777
BsuRI GGCC 7 cut(s) 1081, 1435, 1486, 1573, 1651, 2229, 2557
BtgI CCRYGG 1 cut(s) 2863
BtrI CACGTC 1 cut(s) 113
BtsI GCAGTG 3 cut(s) 202, 2034, 2538
Cac8I GCNNGC 6 cut(s) 23, 151, 193, 657, 1945, 2512
CaiI CAGNNNCTG 3 cut(s) 71, 1961, 2030
CciI TCATGA 1 cut(s) 1065
CfoI GCGC 4 cut(s) 782, 1157, 1312, 1603
Cfr10I RCCGGY 2 cut(s) 889, 1081
Cfr13I GGNCC 9 cut(s) 396, 887, 923, 986, 1433, 1571, 1649, 2054, 2555
Csp6I GTAC 4 cut(s) 748, 1440, 1584, 2015
CviQI GTAC 4 cut(s) 748, 1440, 1584, 2015
DdeI CTNAG 9 cut(s) 64, 342, 471, 535, 710, 1271, 1932, 2301, 2694
DrdI GACNNNNNNGTC 2 cut(s) 2132, 2494
DseDI GACNNNNNNGTC 2 cut(s) 2132, 2494
EaeI YGGCCR 1 cut(s) 1079
EagI CGGCCG 1 cut(s) 1079
Eam1104I CTCTTC 3 cut(s) 3, 750, 2041
EarI CTCTTC 3 cut(s) 3, 750, 2041
EciI GGCGGA 2 cut(s) 67, 2333
Ecl136II GAGCTC 2 cut(s) 21, 498
EclXI CGGCCG 1 cut(s) 1079
Eco130I CCWWGG 4 cut(s) 506, 2224, 2627, 2863
Eco147I AGGCCT 2 cut(s) 1486, 2229
Eco24I GRGCYC 3 cut(s) 23, 500, 603
Eco47I GGWCC 5 cut(s) 396, 887, 923, 986, 2054
Eco52I CGGCCG 1 cut(s) 1079
Eco53kI GAGCTC 2 cut(s) 21, 498
Eco57I CTGAAG 3 cut(s) 1221, 1371, 2667
Eco72I CACGTG 2 cut(s) 1145, 1760
Eco88I CYCGRG 2 cut(s) 1587, 2674
EcoICRI GAGCTC 2 cut(s) 21, 498
EcoNI CCTNNNNNAGG 1 cut(s) 510
EcoO109I RGGNCCY 2 cut(s) 1433, 1571
EcoRI GAATTC 1 cut(s) 2210
EcoRII CCWGG 5 cut(s) 919, 1455, 1738, 1837, 2040
EcoT14I CCWWGG 4 cut(s) 506, 2224, 2627, 2863
EcoT38I GRGCYC 3 cut(s) 23, 500, 603
ErhI CCWWGG 4 cut(s) 506, 2224, 2627, 2863
FalI AAGNNNNNCTT 2 cut(s) 2259, 2291
FaqI GGGAC 1 cut(s) 1212
FauNDI CATATG 1 cut(s) 1420
FbaI TGATCA 3 cut(s) 2400, 2548, 2809
FblI GTMKAC 1 cut(s) 1533
FriOI GRGCYC 3 cut(s) 23, 500, 603
FspAI RTGCGCAY 1 cut(s) 1602
FspI TGCGCA 2 cut(s) 1311, 1602
GlaI GCGC 4 cut(s) 781, 1156, 1311, 1602
GsaI CCCAGC 1 cut(s) 355
GsuI CTGGAG 1 cut(s) 156
HaeIII GGCC 7 cut(s) 1081, 1435, 1486, 1573, 1651, 2229, 2557
HapII CCGG 4 cut(s) 456, 890, 1082, 2526
HhaI GCGC 4 cut(s) 782, 1157, 1312, 1603
Hin1I GRCGYC 1 cut(s) 274
Hin6I GCGC 4 cut(s) 780, 1155, 1310, 1601
HinP1I GCGC 4 cut(s) 780, 1155, 1310, 1601
HincII GTYRAC 3 cut(s) 202, 1222, 1534
HindII GTYRAC 3 cut(s) 202, 1222, 1534
HindIII AAGCTT 3 cut(s) 532, 1273, 1608
HpaII CCGG 4 cut(s) 456, 890, 1082, 2526
HphI GGTGA 6 cut(s) 1415, 1556, 2018, 2219, 2384, 2804
Hpy166II GTNNAC 6 cut(s) 34, 187, 202, 1222, 1448, 1534
Hpy8I GTNNAC 6 cut(s) 34, 187, 202, 1222, 1448, 1534
Hpy99I CGWCG 3 cut(s) 111, 114, 276
HpyCH4IV ACGT 8 cut(s) 30, 112, 274, 746, 1144, 1504, 1759, 2127
HpyF3I CTNAG 9 cut(s) 64, 342, 471, 535, 710, 1271, 1932, 2301, 2694
HpySE526I ACGT 8 cut(s) 30, 112, 274, 746, 1144, 1504, 1759, 2127
Hsp92I GRCGYC 1 cut(s) 274
HspAI GCGC 4 cut(s) 780, 1155, 1310, 1601
Ksp22I TGATCA 3 cut(s) 2400, 2548, 2809
LmnI GCTCC 5 cut(s) 606, 811, 1452, 1963, 2120
LweI GCATC 9 cut(s) 173, 475, 642, 1307, 1588, 1657, 2474, 2716, 2801
MaeII ACGT 8 cut(s) 30, 112, 274, 746, 1144, 1504, 1759, 2127
MboII GAAGA 9 cut(s) 20, 767, 857, 1103, 1226, 1260, 2058, 2486, 2673
MfeI CAATTG 2 cut(s) 624, 642
MflI RGATCY 2 cut(s) 916, 2528
MhlI GDGCHC 5 cut(s) 23, 343, 500, 603, 881
MlyI GAGTC 2 cut(s) 1745, 2504
MmeI TCCRAC 4 cut(s) 130, 575, 1975, 2065
MroXI GAANNNNTTC 2 cut(s) 938, 2821
MseI TTAA 4 cut(s) 1242, 1554, 1971, 2634
MslI CAYNNNNRTG 5 cut(s) 699, 1325, 1778, 2393, 2797
MspA1I CMGCKG 5 cut(s) 176, 737, 1292, 1315, 2789
MspI CCGG 4 cut(s) 456, 890, 1082, 2526
MspR9I CCNGG 6 cut(s) 921, 1457, 1740, 1839, 2042, 2526
MunI CAATTG 2 cut(s) 624, 642
MvaI CCWGG 5 cut(s) 921, 1457, 1740, 1839, 2042
MvnI CGCG 1 cut(s) 780
NciI CCSGG 1 cut(s) 2526
NcoI CCATGG 1 cut(s) 2863
NdeI CATATG 1 cut(s) 1420
NheI GCTAGC 1 cut(s) 149
NmeAIII GCCGAG 2 cut(s) 923, 1057
NmuCI GTSAC 9 cut(s) 1138, 1327, 1538, 1544, 1655, 1697, 2032, 2099, 2479
NsbI TGCGCA 2 cut(s) 1311, 1602
NspI RCATGY 3 cut(s) 698, 1324, 1947
PaeI GCATGC 1 cut(s) 1947
PagI TCATGA 1 cut(s) 1065
PasI CCCWGGG 1 cut(s) 2041
PceI AGGCCT 2 cut(s) 1486, 2229
PciI ACATGT 1 cut(s) 1320
PcsI WCGNNNNNNNCGW 2 cut(s) 1501, 2124
PdmI GAANNNNTTC 2 cut(s) 938, 2821
PflMI CCANNNNNTGG 1 cut(s) 2773
PleI GAGTC 2 cut(s) 1745, 2503
PmaCI CACGTG 2 cut(s) 1145, 1760
PmlI CACGTG 2 cut(s) 1145, 1760
PpsI GAGTC 2 cut(s) 1745, 2503
Ppu21I YACGTR 2 cut(s) 1145, 1760
PscI ACATGT 1 cut(s) 1320
Psp124BI GAGCTC 2 cut(s) 23, 500
Psp6I CCWGG 5 cut(s) 919, 1455, 1738, 1837, 2040
PspCI CACGTG 2 cut(s) 1145, 1760
PspFI CCCAGC 1 cut(s) 351
PspGI CCWGG 5 cut(s) 919, 1455, 1738, 1837, 2040
PspPI GGNCC 9 cut(s) 396, 887, 923, 986, 1433, 1571, 1649, 2054, 2555
PsrI GAACNNNNNNTAC 2 cut(s) 1576, 1608
PstI CTGCAG 3 cut(s) 160, 742, 2254
PstNI CAGNNNCTG 3 cut(s) 71, 1961, 2030
PsuI RGATCY 2 cut(s) 916, 2528
PvuII CAGCTG 5 cut(s) 176, 737, 1292, 1315, 2789
RsaI GTAC 4 cut(s) 749, 1441, 1585, 2016
RsaNI GTAC 4 cut(s) 748, 1440, 1584, 2015
RseI CAYNNNNRTG 5 cut(s) 699, 1325, 1778, 2393, 2797
SacI GAGCTC 2 cut(s) 23, 500
SalI GTCGAC 1 cut(s) 1532
SaqAI TTAA 4 cut(s) 1242, 1554, 1971, 2634
Sau96I GGNCC 9 cut(s) 396, 887, 923, 986, 1433, 1571, 1649, 2054, 2555
ScaI AGTACT 2 cut(s) 1441, 2016
SchI GAGTC 2 cut(s) 1745, 2504
ScrFI CCNGG 6 cut(s) 921, 1457, 1740, 1839, 2042, 2526
SduI GDGCHC 5 cut(s) 23, 343, 500, 603, 881
SfaNI GCATC 9 cut(s) 173, 475, 642, 1307, 1588, 1657, 2474, 2716, 2801
SfcI CTRYAG 3 cut(s) 156, 738, 2250
SinI GGWCC 5 cut(s) 396, 887, 923, 986, 2054
SmiMI CAYNNNNRTG 5 cut(s) 699, 1325, 1778, 2393, 2797
SphI GCATGC 1 cut(s) 1947
SseBI AGGCCT 2 cut(s) 1486, 2229
SsiI CCGC 4 cut(s) 78, 682, 2205, 2318
SstI GAGCTC 2 cut(s) 23, 500
StuI AGGCCT 2 cut(s) 1486, 2229
StyD4I CCNGG 6 cut(s) 919, 1455, 1738, 1837, 2040, 2524
StyI CCWWGG 4 cut(s) 506, 2224, 2627, 2863
TaiI ACGT 8 cut(s) 33, 115, 277, 749, 1147, 1507, 1762, 2130
TaqI TCGA 3 cut(s) 271, 1533, 2263
TatI WGTACW 2 cut(s) 1439, 2014
Tru1I TTAA 4 cut(s) 1242, 1554, 1971, 2634
Tru9I TTAA 4 cut(s) 1242, 1554, 1971, 2634
TseFI GTSAC 9 cut(s) 1138, 1327, 1538, 1544, 1655, 1697, 2032, 2099, 2479
Tsp45I GTSAC 9 cut(s) 1138, 1327, 1538, 1544, 1655, 1697, 2032, 2099, 2479
TspGWI ACGGA 4 cut(s) 1077, 1465, 2133, 2580
Van91I CCANNNNNTGG 1 cut(s) 2773
VpaK11BI GGWCC 5 cut(s) 396, 887, 923, 986, 2054
XagI CCTNNNNNAGG 1 cut(s) 510
XapI RAATTY 4 cut(s) 464, 1053, 1915, 2210
XceI RCATGY 3 cut(s) 698, 1324, 1947
XcmI CCANNNNNNNNNTGG 1 cut(s) 2048
XmiI GTMKAC 1 cut(s) 1533
XmnI GAANNNNTTC 2 cut(s) 938, 2821
ZraI GACGTC 1 cut(s) 275
ZrmI AGTACT 2 cut(s) 1441, 2016
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.