Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0002807

Physical Location & Seq

Genomic Coordinates Reverse (-)

35263962 .. 35269990

Gene Structure 6029 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1258600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2862 bp

ATGAGAGAGGAGGTCATCAGCTCCGGAGGGAACATTGATCCTGCCCCTGCTGCCAGTTCGGCTGGGGCATCGTCGCCGACTGTTCCGGCAAATGTGGGCAGTGTAGACGGGTCTATTCATGGACAAGGCTCCAAAGGAGCATCTATATCTTGTGTTGGTTCGCAACCACCGGTGACTTCTTTGAGCACCAGTGCTGGCGGTGGTGGGGGTGGGGATAGTTCTGTTTTTGGATCATCAAGGCTGTCGTGTAGACCTTGGGAAAGAGGCGACTTACTGCGCCGCTTGGCTACTTTTAAACCTTCAAATTGGTTTTCAAAGCCCAAGGTCATCAGTTCATTGGCATGTGCTCGGAGAGGTTGGGTGAATGTTGATGTGGATAAAATTGCATGTGAATCATGCGGTGCATCCCTTGGTTTTGCTTTGTTGCCATCTTGGACTCCTGACGAAGTTCAAAATGCGGGGGATGCCTTTGTCAAGCAGCTGGATTCCGGTCACAAAGCTGCTTGTCCTTGGAGAGGAAACAGCTGCCCAGAAAGCCTGGTGCAATTCCCTCCTACCCCTCAGTCTGCTTTAATTGGGGGATATAAGGATAGATGTGATGGACTTTTGCAATTCCACTCTCTACCTAATGTAGCTGCATCTGCAATTGAGCAAATGTTGGTTTCTCGGGGTCCGCAGGTTGATCGCTTTCTTATGGCAGGGGAAGTAGATTTTAAACCAGAAAGTATACCAGAACAGGAAAGCTCCCGAGATGGATCAATCTGTTTATATTCTCGTGCTCAGAAGCTTATAAGTCTTTGTGGATGGGAACCACGATGGCTTTTAAATGCACAAGACTGTGAAGAACATTCTGCCCAATCAGCTAGAAATGGATATTCTCTTGGGCCGACGTATGCCCAGGTCCATCTTTCACAAGAACCTGGACCAAGCAAGAAAGCAGTTTCTGCATCTGCTAGAAAAGATGCTGGAAAGAGTAAAATGTTGGTTAAGGAATCTAGACGTGATCCCAGATCACCCTTACTAGATTGCAGCTTATGTGGGGCTACAGTTAGAATATTGGATTTCTTAACCATTCCTCGACCTGTGCGATTTACTCCCAACAACATTGATATTCCTGACACAAGCAAAAAATTGGGATTGATACGTGGCGCAAGTGCAGCCAGTGGAATTAGTGGTTGGGTTGCTACTGATGATGCAGAGAAAGAACAGACTGAAGACCGTGACGAAGTAGCAACAACAACTGAGGGGAGCTTGTTTCCAAAAACAGATGTTGATTTGAATCTTACAATGGGAGGAGGTTTTACTTTTAATCGGTTTGGCAGACCAGAAATGTCAGAAAACATTCAGGACGCAGATATGGGAAGGGATCTGATGATTGGGCAACCTGCAGGCAGTGAGGTTGGTGATCGAGCAGCTTCATATGAATCAAGGGGTCCCAGTTCTCGTAAGCGGAGTTTGGAAAAAGGAGGCAGTTCTGTTGATAGGCCACATTTAAGGACACAGCACGCTGATAGTTTTGAAGGAACTGTCATTGATCGTGATGGTGATGAAGTTACAGATGGTGGACAATACTCAGCTGGGCCTTCAAAACGTGCTCGTGATTCAGATATGTTTGATACGTACTGTTCATCTGGTGCTGGTCCCAGTCATTCAATGGGTCTTGATATTTATGCTGATGCTAATAGAGTTGCTTCGTTTCCGCAAGGTAGCGACCAATTTGGAATCCATTCAAATATGGATTCAGCACGTGCATCTTCAGTCATTGCAATGGATACAATCGGTCACGGTACAGATGACGACTCTATGGAAAGTGTTGAAAATTATCCCGGAGATGTTGATGATGTTCATTTCCCCACTTCTAGTACATATGGAAATCTGGACATGAATGATACATCAGAATTGAATTATAGTAATCAAGCTCAGCAGAGTGTTGGTTTCCAACCCGTGGCTGATGTAGTTATTGGGGAAATAGGTGTCAGTAGTACAAATGATGGGGAGGAAATTTTTAACACAGAAACTGTGACTGCTCAGGCCAGGGATGGTATTAGTTTCGGGATTAGTGTAGGAAGTGTTGGAATGTGTGCTAGTCATGAAGCTGAGATTCATGGGGCTGATGTATCTGTCCATAGAGCAGATAGTGTAGTTGGCGATGTGGAACCTAGAACAGAAGATGCTGAAAATCAGGGCCAGACAGGTGAATCTGCCCCAGATCCTGGGCTAATGGATGAAATTGTCCCTGATGAAATAAATAGGGAAGATCCCCATGGTGATAGTCAGGAGATGATATCTCGATCTATAGGGAGGGCTGATAGTGGCTCAAAGATTGATGGTTCTACTAAGGCTGAATCTGTGGAAAGTGGTGAAAAGATTAGTCAAGGCTTCAAGTTTGAGAACAGTGCCCGCCCTTCTCTTTCATGCAATGCTAATGTCTTCTCCAATTATCGGACAACCAAGGAGGTTAAAAGTGCTGGTAAATCTTCATTTACGAACAATTGTGTGTACCAAGAATCAGAGTATGCAGTTGCCAACGGGCTAGGACCTCCAAAAGGTGAAAGCAATTATGAAGAACCTATGGAATTTGATCCAATTGGCCATCACAACCAATTCTGCCCCTGGGTCAATGGGAATGTTGCTGCTGCAGGCAGTAGTAGCTGTGGCCATGGTTCCAGTGTTGCTGCTGTTGCACTTTGTGGTTGGCAGCTAACCTTAGATGCCCTTGATGCTCTGCGTTCACTGGGGCAGGATGCAATTCAAACATTACAGTCCGAGTCAGCAGCATCTTTATACAAGGATGATCACCAAACCCCTAGCCAGAAACTCCTTCAAAACCACTCTATAAGTCGAAGCCAGGGGCAATATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0008150 GO:0009966 GO:0009968 GO:0010646 GO:0010648 GO:0010941 GO:0012505 GO:0016020 GO:0019899 GO:0019900 GO:0019901 GO:0023051 GO:0023057 GO:0031090 GO:0031965 GO:0031967 GO:0031975 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0060548 GO:0065007 GO:1901099 GO:2001233 GO:2001234 GO:2001236 GO:2001237 GO:2001239 GO:2001240

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C3HC

Protein Analysis

954

Amino Acids

101.11

Weight (kDa)

4.79

Isoelectric Point (pI)

45.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-C3HC	PF07967	85 - 209	6.8e-37	NuBaID N-terminal domain (aka zf-C3HC)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002807)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17210
fragaria_vesca	FvH4_3g05100 FvH4_3g05100 FvH4_3g05100 FvH4_3g05100 FvH4_3g05100 FvH4_3g05100
malus_domestica	MD03G1137700.v1.1 MD10G1258600.v1.1
prunus_persica	Prupe.4G085100_v2.0.a1 Prupe.4G085100_v2.0.a1 Prupe.4G085100_v2.0.a1 Prupe.4G085100_v2.0.a1 Prupe.4G085100_v2.0.a1 Prupe.4G085100_v2.0.a1 Prupe.4G085100_v2.0.a1 Prupe.4G085100_v2.0.a1 Prupe.4G085100_v2.0.a1 Prupe.4G085100_v2.0.a1 Prupe.4G085100_v2.0.a1
pyrus_communis	pycom05g26060 pycom10g21510
rosa_chinensis	RchiOBHm_Chr5g0014771
rosa_laevigata	RLG00000032139
rosa_multiflora	Rmu_co8256719.1_g000001 Rmu_co8305615.1_g000001 Rmu_sc0001908.1_g000001 Rmu_sc0028154.1_g000002 Rmu_sc0031515.1_g000001
rosa_roxburghii	Rroxscaffold_1G00061770
rosa_rugosa	Rorug05G0020600 Rorug05G0020700
rosa_samantha	Rh5AG116200 Rh5AG116400 Rh5BG113000 Rh5CG124700 Rh5DG112400 Rh5DG112700
rosa_wichuraiana	Rw5G010030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	791
Acc36I	ACCTGC	2 cut(s)	667, 1393
AccB7I	CCANNNNNTGG	2 cut(s)	1945, 2213
AccI	GTMKAC	3 cut(s)	105, 250, 727
AccIII	TCCGGA	1 cut(s)	23
AciI	CCGC	8 cut(s)	198, 280, 399, 458, 674, 1450, 1700, 2401
AclWI	GGATC	8 cut(s)	32, 238, 763, 998, 1374, 2204, 2252, 2576
AcoI	YGGCCR	2 cut(s)	2590, 2656
AcsI	RAATTY	2 cut(s)	2001, 2576
AcuI	CTGAAG	2 cut(s)	1233, 1740
AcvI	CACGTG	1 cut(s)	1748
AdeI	CACNNNGTG	1 cut(s)	2690
AfaI	GTAC	5 cut(s)	1622, 1789, 1864, 1984, 2501
AfiI	CCNNNNNNNGG	5 cut(s)	515, 1945, 2213, 2442, 2546
AgeI	ACCGGT	1 cut(s)	169
AjiI	CACGTC	1 cut(s)	1001
AjnI	CCWGG	7 cut(s)	537, 897, 919, 2033, 2212, 2612, 2847
AjuI	GAANNNNNNNTTGG	2 cut(s)	1159, 1191
Alw21I	GWGCWC	4 cut(s)	188, 349, 781, 1597
AlwI	GGATC	8 cut(s)	32, 238, 763, 998, 1374, 2204, 2252, 2576
AlwNI	CAGNNNCTG	3 cut(s)	944, 2018, 2213
Ama87I	CYCGRG	2 cut(s)	666, 747
Aor13HI	TCCGGA	1 cut(s)	23
AoxI	GGCC	7 cut(s)	884, 1484, 1580, 2031, 2185, 2590, 2656
ApoI	RAATTY	2 cut(s)	2001, 2576
AsiGI	ACCGGT	1 cut(s)	169
Asp700I	GAANNNNTTC	2 cut(s)	1341, 1726
AspLEI	GCGC	2 cut(s)	279, 1151
AspS9I	GGNCC	9 cut(s)	671, 884, 901, 923, 1433, 1580, 1640, 2185, 2537
AsuC2I	CCSGG	1 cut(s)	1827
AvaI	CYCGRG	2 cut(s)	666, 747
AvaII	GGWCC	6 cut(s)	671, 901, 923, 1433, 1640, 2537
BaeGI	GKGCMC	1 cut(s)	2401
BalI	TGGCCA	2 cut(s)	2592, 2658
BauI	CACGAG	2 cut(s)	774, 1596
BbrPI	CACGTG	1 cut(s)	1748
BbsI	GAAGAC	2 cut(s)	1221, 2422
Bbv12I	GWGCWC	4 cut(s)	188, 349, 781, 1597
BcgI	CGANNNNNNTGC	2 cut(s)	665, 699
BciT130I	CCWGG	7 cut(s)	539, 899, 921, 2035, 2214, 2614, 2849
BciVI	GTATCC	1 cut(s)	1765
BclI	TGATCA	1 cut(s)	2794
BcnI	CCSGG	1 cut(s)	1827
BfaI	CTAG	9 cut(s)	864, 954, 996, 1022, 1860, 2085, 2160, 2534, 2808
BfmI	CTRYAG	4 cut(s)	1044, 1386, 2295, 2637
BfuAI	ACCTGC	2 cut(s)	667, 1393
BfuI	GTATCC	1 cut(s)	1765
BglI	GCCNNNNNGGC	1 cut(s)	59
BlpI	GCTNAGC	1 cut(s)	1920
Bme1390I	CCNGG	8 cut(s)	539, 899, 921, 1827, 2035, 2214, 2614, 2849
Bme18I	GGWCC	6 cut(s)	671, 901, 923, 1433, 1640, 2537
BmeT110I	CYCGRG	2 cut(s)	666, 747
BmgBI	CACGTC	1 cut(s)	1001
BmgT120I	GGNCC	9 cut(s)	671, 884, 901, 923, 1433, 1580, 1640, 2185, 2537
BmiI	GGNNCC	8 cut(s)	130, 672, 810, 1434, 1435, 1642, 2157, 2665
BmrFI	CCNGG	8 cut(s)	539, 899, 921, 1827, 2035, 2214, 2614, 2849
BmrI	ACTGGG	3 cut(s)	1431, 1638, 2744
BmuI	ACTGGG	3 cut(s)	1431, 1638, 2744
BpiI	GAAGAC	2 cut(s)	1221, 2422
Bpu10I	CCTNAGC	1 cut(s)	2028
Bpu1102I	GCTNAGC	1 cut(s)	1920
BpuMI	CCSGG	1 cut(s)	1827
BsaAI	YACGTR	3 cut(s)	1145, 1620, 1748
BsaBI	GATNNNNATC	1 cut(s)	1278
BsaWI	WCCGGW	3 cut(s)	23, 169, 488
Bsc4I	CCNNNNNNNGG	5 cut(s)	515, 1945, 2213, 2442, 2546
Bse118I	RCCGGY	1 cut(s)	169
Bse1I	ACTGG	7 cut(s)	54, 189, 1161, 1437, 1644, 2667, 2739
Bse3DI	GCAATG	3 cut(s)	1761, 1773, 2425
Bse8I	GATNNNNATC	1 cut(s)	1278
BseAI	TCCGGA	1 cut(s)	23
BseBI	CCWGG	7 cut(s)	539, 899, 921, 2035, 2214, 2614, 2849
BseGI	GGATG	7 cut(s)	404, 469, 809, 2044, 2230, 2749, 2797
BseJI	GATNNNNATC	1 cut(s)	1278
BseLI	CCNNNNNNNGG	5 cut(s)	515, 1945, 2213, 2442, 2546
BseMI	GCAATG	3 cut(s)	1761, 1773, 2425
BseMII	CTCAG	7 cut(s)	575, 794, 1233, 1587, 1934, 2042, 2088
BseNI	ACTGG	7 cut(s)	54, 189, 1161, 1437, 1644, 2667, 2739
BseRI	GAGGAG	2 cut(s)	23, 1308
BseSI	GKGCMC	1 cut(s)	2401
BseYI	CCCAGC	2 cut(s)	62, 1577
BsgI	GTGCAG	1 cut(s)	1176
BshFI	GGCC	7 cut(s)	886, 1486, 1582, 2033, 2187, 2592, 2658
BshTI	ACCGGT	1 cut(s)	169
BsiHKAI	GWGCWC	4 cut(s)	188, 349, 781, 1597
BsiHKCI	CYCGRG	2 cut(s)	666, 747
BsiSI	CCGG	5 cut(s)	24, 86, 170, 489, 1827
BslFI	GGGAC	3 cut(s)	1419, 1626, 2219
BslI	CCNNNNNNNGG	5 cut(s)	515, 1945, 2213, 2442, 2546
BsmFI	GGGAC	3 cut(s)	1419, 1626, 2219
BsnI	GGCC	7 cut(s)	886, 1486, 1582, 2033, 2187, 2592, 2658
BsoBI	CYCGRG	2 cut(s)	666, 747
Bsp1286I	GDGCHC	5 cut(s)	188, 349, 781, 1597, 2401
Bsp13I	TCCGGA	1 cut(s)	23
Bsp1720I	GCTNAGC	1 cut(s)	1920
Bsp19I	CCATGG	2 cut(s)	2263, 2659
BspACI	CCGC	8 cut(s)	198, 280, 399, 458, 674, 1450, 1700, 2401
BspANI	GGCC	7 cut(s)	886, 1486, 1582, 2033, 2187, 2592, 2658
BspCNI	CTCAG	7 cut(s)	574, 793, 1234, 1586, 1933, 2041, 2089
BspEI	TCCGGA	1 cut(s)	23
BspHI	TCATGA	1 cut(s)	2089
BspLI	GGNNCC	8 cut(s)	130, 672, 810, 1434, 1435, 1642, 2157, 2665
BspMAI	CTGCAG	2 cut(s)	1390, 2641
BspMI	ACCTGC	2 cut(s)	667, 1393
BspPI	GGATC	8 cut(s)	32, 238, 763, 998, 1374, 2204, 2252, 2576
BsrDI	GCAATG	3 cut(s)	1761, 1773, 2425
BsrFI	RCCGGY	1 cut(s)	169
BsrI	ACTGG	7 cut(s)	54, 189, 1161, 1437, 1644, 2667, 2739
BssAI	RCCGGY	1 cut(s)	169
BssNAI	GTATAC	1 cut(s)	728
BssSI	CACGAG	2 cut(s)	774, 1596
BssT1I	CCWWGG	7 cut(s)	254, 321, 409, 509, 2263, 2451, 2659
Bst1107I	GTATAC	1 cut(s)	728
Bst2BI	CACGAG	2 cut(s)	774, 1596
Bst2UI	CCWGG	7 cut(s)	539, 899, 921, 2035, 2214, 2614, 2849
BstAPI	GCANNNNNTGC	1 cut(s)	944
BstBAI	YACGTR	3 cut(s)	1145, 1620, 1748
BstC8I	GCNNGC	5 cut(s)	196, 1390, 1506, 2401, 2641
BstDEI	CTNAG	9 cut(s)	561, 780, 1242, 1573, 1920, 2028, 2097, 2337, 2707
BstDSI	CCRYGG	3 cut(s)	1944, 2263, 2659
BstENI	CCTNNNNNAGG	2 cut(s)	513, 2544
BstF5I	GGATG	7 cut(s)	404, 469, 809, 2044, 2230, 2749, 2797
BstHHI	GCGC	2 cut(s)	279, 1151
BstNI	CCWGG	7 cut(s)	539, 899, 921, 2035, 2214, 2614, 2849
BstNSI	RCATGY	2 cut(s)	345, 390
BstSCI	CCNGG	8 cut(s)	537, 897, 919, 1825, 2033, 2212, 2612, 2847
BstSFI	CTRYAG	4 cut(s)	1044, 1386, 2295, 2637
BstSLI	GKGCMC	1 cut(s)	2401
BstSNI	TACGTA	1 cut(s)	1620
BstV2I	GAAGAC	2 cut(s)	1221, 2422
BstX2I	RGATCY	3 cut(s)	1366, 2209, 2257
BstYI	RGATCY	3 cut(s)	1366, 2209, 2257
BstZ17I	GTATAC	1 cut(s)	728
BsuI	GTATCC	1 cut(s)	1765
BsuRI	GGCC	7 cut(s)	886, 1486, 1582, 2033, 2187, 2592, 2658
BtgI	CCRYGG	3 cut(s)	1944, 2263, 2659
BtgZI	GCGATG	1 cut(s)	2163
BtrI	CACGTC	1 cut(s)	1001
BtsCI	GGATG	7 cut(s)	404, 469, 809, 2044, 2230, 2749, 2797
BtsI	GCAGTG	2 cut(s)	106, 1399
BtsIMutI	CAGTG	7 cut(s)	106, 196, 1168, 1399, 2401, 2674, 2732
BveI	ACCTGC	2 cut(s)	667, 1393
Cac8I	GCNNGC	5 cut(s)	196, 1390, 1506, 2401, 2641
CaiI	CAGNNNCTG	3 cut(s)	944, 2018, 2213
CciI	TCATGA	1 cut(s)	2089
CfoI	GCGC	2 cut(s)	279, 1151
Cfr10I	RCCGGY	1 cut(s)	169
Cfr13I	GGNCC	9 cut(s)	671, 884, 901, 923, 1433, 1580, 1640, 2185, 2537
CseI	GACGC	1 cut(s)	1358
Csp6I	GTAC	5 cut(s)	1621, 1788, 1863, 1983, 2500
CspAI	ACCGGT	1 cut(s)	169
CviQI	GTAC	5 cut(s)	1621, 1788, 1863, 1983, 2500
DdeI	CTNAG	9 cut(s)	561, 780, 1242, 1573, 1920, 2028, 2097, 2337, 2707
DraI	TTTAAA	3 cut(s)	295, 715, 825
DraIII	CACNNNGTG	1 cut(s)	2690
EaeI	YGGCCR	2 cut(s)	2590, 2656
Eco105I	TACGTA	1 cut(s)	1620
Eco130I	CCWWGG	7 cut(s)	254, 321, 409, 509, 2263, 2451, 2659
Eco32I	GATATC	1 cut(s)	2286
Eco47I	GGWCC	6 cut(s)	671, 901, 923, 1433, 1640, 2537
Eco57I	CTGAAG	2 cut(s)	1233, 1740
Eco72I	CACGTG	1 cut(s)	1748
Eco88I	CYCGRG	2 cut(s)	666, 747
EcoNI	CCTNNNNNAGG	2 cut(s)	513, 2544
EcoO109I	RGGNCCY	2 cut(s)	1433, 2537
EcoRII	CCWGG	7 cut(s)	537, 897, 919, 2033, 2212, 2612, 2847
EcoRV	GATATC	1 cut(s)	2286
EcoT14I	CCWWGG	7 cut(s)	254, 321, 409, 509, 2263, 2451, 2659
ErhI	CCWWGG	7 cut(s)	254, 321, 409, 509, 2263, 2451, 2659
FaqI	GGGAC	3 cut(s)	1419, 1626, 2219
FauI	CCCGC	2 cut(s)	451, 2408
FauNDI	CATATG	2 cut(s)	1420, 1867
FbaI	TGATCA	1 cut(s)	2794
FblI	GTMKAC	3 cut(s)	105, 250, 727
FokI	GGATG	7 cut(s)	391, 476, 816, 2051, 2237, 2756, 2804
FspBI	CTAG	9 cut(s)	864, 954, 996, 1022, 1860, 2085, 2160, 2534, 2808
GlaI	GCGC	2 cut(s)	278, 1150
GsaI	CCCAGC	2 cut(s)	66, 1581
HaeIII	GGCC	7 cut(s)	886, 1486, 1582, 2033, 2187, 2592, 2658
HapII	CCGG	5 cut(s)	24, 86, 170, 489, 1827
HgaI	GACGC	1 cut(s)	1358
HhaI	GCGC	2 cut(s)	279, 1151
Hin6I	GCGC	2 cut(s)	277, 1149
HinP1I	GCGC	2 cut(s)	277, 1149
HindIII	AAGCTT	1 cut(s)	785
HpaII	CCGG	5 cut(s)	24, 86, 170, 489, 1827
Hpy166II	GTNNAC	6 cut(s)	106, 251, 728, 1565, 2500, 2732
Hpy188I	TCNGA	9 cut(s)	351, 783, 1336, 1371, 1606, 1897, 2445, 2512, 2767
Hpy8I	GTNNAC	6 cut(s)	106, 251, 728, 1565, 2500, 2732
Hpy99I	CGWCG	2 cut(s)	76, 892
HpyAV	CCTTC	6 cut(s)	309, 1356, 1514, 1593, 2415, 2831
HpyCH4IV	ACGT	6 cut(s)	890, 1000, 1144, 1591, 1619, 1747
HpyF3I	CTNAG	9 cut(s)	561, 780, 1242, 1573, 1920, 2028, 2097, 2337, 2707
HpySE526I	ACGT	6 cut(s)	890, 1000, 1144, 1591, 1619, 1747
HspAI	GCGC	2 cut(s)	277, 1149
KflI	GGGWCCC	1 cut(s)	1433
Kpn2I	TCCGGA	1 cut(s)	23
Ksp22I	TGATCA	1 cut(s)	2794
LmnI	GCTCC	5 cut(s)	26, 134, 137, 749, 1248
MaeI	CTAG	9 cut(s)	864, 954, 996, 1022, 1860, 2085, 2160, 2534, 2808
MaeII	ACGT	6 cut(s)	890, 1000, 1144, 1591, 1619, 1747
MaeIII	GTNAC	6 cut(s)	172, 491, 1220, 1552, 1781, 2020
MboII	GAAGA	8 cut(s)	854, 1226, 1746, 2180, 2267, 2422, 2469, 2576
MfeI	CAATTG	3 cut(s)	645, 2491, 2586
MflI	RGATCY	3 cut(s)	1366, 2209, 2257
MhlI	GDGCHC	5 cut(s)	188, 349, 781, 1597, 2401
MlsI	TGGCCA	2 cut(s)	2592, 2658
MluNI	TGGCCA	2 cut(s)	2592, 2658
MlyI	GAGTC	3 cut(s)	430, 1793, 2777
MmeI	TCCRAC	2 cut(s)	1963, 2053
Mox20I	TGGCCA	2 cut(s)	2592, 2658
MroI	TCCGGA	1 cut(s)	23
MroXI	GAANNNNTTC	2 cut(s)	1341, 1726
MscI	TGGCCA	2 cut(s)	2592, 2658
MslI	CAYNNNNRTG	2 cut(s)	340, 1766
Msp20I	TGGCCA	2 cut(s)	2592, 2658
MspA1I	CMGCKG	3 cut(s)	481, 525, 1577
MspI	CCGG	5 cut(s)	24, 86, 170, 489, 1827
MspR9I	CCNGG	8 cut(s)	539, 899, 921, 1827, 2035, 2214, 2614, 2849
MunI	CAATTG	3 cut(s)	645, 2491, 2586
MvaI	CCWGG	7 cut(s)	539, 899, 921, 2035, 2214, 2614, 2849
NciI	CCSGG	1 cut(s)	1827
NcoI	CCATGG	2 cut(s)	2263, 2659
NdeI	CATATG	2 cut(s)	1420, 1867
NlaIV	GGNNCC	8 cut(s)	130, 672, 810, 1434, 1435, 1642, 2157, 2665
NmuCI	GTSAC	5 cut(s)	172, 491, 1220, 1781, 2020
NspI	RCATGY	2 cut(s)	345, 390
PagI	TCATGA	1 cut(s)	2089
PasI	CCCWGGG	1 cut(s)	2613
PcsI	WCGNNNNNNNCGW	1 cut(s)	1084
PdmI	GAANNNNTTC	2 cut(s)	1341, 1726
PflMI	CCANNNNNTGG	2 cut(s)	1945, 2213
PfoI	TCCNGGA	1 cut(s)	1825
PinAI	ACCGGT	1 cut(s)	169
PleI	GAGTC	3 cut(s)	430, 1793, 2776
PmaCI	CACGTG	1 cut(s)	1748
PmlI	CACGTG	1 cut(s)	1748
PpsI	GAGTC	3 cut(s)	430, 1793, 2776
Ppu21I	YACGTR	3 cut(s)	1145, 1620, 1748
PpuMI	RGGWCCY	2 cut(s)	1433, 2537
PsiI	TTATAA	1 cut(s)	791
Psp5II	RGGWCCY	2 cut(s)	1433, 2537
Psp6I	CCWGG	7 cut(s)	537, 897, 919, 2033, 2212, 2612, 2847
PspCI	CACGTG	1 cut(s)	1748
PspFI	CCCAGC	2 cut(s)	62, 1577
PspGI	CCWGG	7 cut(s)	537, 897, 919, 2033, 2212, 2612, 2847
PspN4I	GGNNCC	8 cut(s)	130, 672, 810, 1434, 1435, 1642, 2157, 2665
PspPI	GGNCC	9 cut(s)	671, 884, 901, 923, 1433, 1580, 1640, 2185, 2537
PspPPI	RGGWCCY	2 cut(s)	1433, 2537
PstI	CTGCAG	2 cut(s)	1390, 2641
PstNI	CAGNNNCTG	3 cut(s)	944, 2018, 2213
PsuI	RGATCY	3 cut(s)	1366, 2209, 2257
PvuII	CAGCTG	3 cut(s)	481, 525, 1577
RsaI	GTAC	5 cut(s)	1622, 1789, 1864, 1984, 2501
RsaNI	GTAC	5 cut(s)	1621, 1788, 1863, 1983, 2500
RseI	CAYNNNNRTG	2 cut(s)	340, 1766
Sau96I	GGNCC	9 cut(s)	671, 884, 901, 923, 1433, 1580, 1640, 2185, 2537
SbfI	CCTGCAGG	1 cut(s)	1390
SchI	GAGTC	3 cut(s)	430, 1793, 2777
ScrFI	CCNGG	8 cut(s)	539, 899, 921, 1827, 2035, 2214, 2614, 2849
SdaI	CCTGCAGG	1 cut(s)	1390
SduI	GDGCHC	5 cut(s)	188, 349, 781, 1597, 2401
SfcI	CTRYAG	4 cut(s)	1044, 1386, 2295, 2637
SgrAI	CRCCGGYG	1 cut(s)	169
SinI	GGWCC	6 cut(s)	671, 901, 923, 1433, 1640, 2537
SmiMI	CAYNNNNRTG	2 cut(s)	340, 1766
SnaBI	TACGTA	1 cut(s)	1620
Sse8387I	CCTGCAGG	1 cut(s)	1390
SsiI	CCGC	8 cut(s)	198, 280, 399, 458, 674, 1450, 1700, 2401
SspI	AATATT	2 cut(s)	1056, 2858
SspMI	CTAG	9 cut(s)	864, 954, 996, 1022, 1860, 2085, 2160, 2534, 2808
StyD4I	CCNGG	8 cut(s)	537, 897, 919, 1825, 2033, 2212, 2612, 2847
StyI	CCWWGG	7 cut(s)	254, 321, 409, 509, 2263, 2451, 2659
TaiI	ACGT	6 cut(s)	893, 1003, 1147, 1594, 1622, 1750
TaqI	TCGA	4 cut(s)	1078, 1408, 2290, 2842
TaqII	GACCGA	1 cut(s)	1769
TatI	WGTACW	2 cut(s)	1862, 1982
TauI	GCSGC	1 cut(s)	282
TscAI	CASTG	7 cut(s)	106, 196, 1168, 1399, 2401, 2674, 2739
TseFI	GTSAC	5 cut(s)	172, 491, 1220, 1781, 2020
Tsp45I	GTSAC	5 cut(s)	172, 491, 1220, 1781, 2020
TspRI	CASTG	7 cut(s)	106, 196, 1168, 1399, 2401, 2674, 2739
Van91I	CCANNNNNTGG	2 cut(s)	1945, 2213
VpaK11BI	GGWCC	6 cut(s)	671, 901, 923, 1433, 1640, 2537
XagI	CCTNNNNNAGG	2 cut(s)	513, 2544
XapI	RAATTY	2 cut(s)	2001, 2576
XbaI	TCTAGA	1 cut(s)	995
XceI	RCATGY	2 cut(s)	345, 390
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1651
XmiI	GTMKAC	3 cut(s)	105, 250, 727
XmnI	GAANNNNTTC	2 cut(s)	1341, 1726
XspI	CTAG	9 cut(s)	864, 954, 996, 1022, 1860, 2085, 2160, 2534, 2808

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.