C3HC zinc finger-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G17210 |
| fragaria_vesca | FvH4_3g05100 FvH4_3g05100 FvH4_3g05100 FvH4_3g05100 FvH4_3g05100 FvH4_3g05100 |
| malus_domestica | MD03G1137700.v1.1 MD10G1258600.v1.1 |
| prunus_persica | Prupe.4G085100_v2.0.a1 Prupe.4G085100_v2.0.a1 Prupe.4G085100_v2.0.a1 Prupe.4G085100_v2.0.a1 Prupe.4G085100_v2.0.a1 Prupe.4G085100_v2.0.a1 Prupe.4G085100_v2.0.a1 Prupe.4G085100_v2.0.a1 Prupe.4G085100_v2.0.a1 Prupe.4G085100_v2.0.a1 Prupe.4G085100_v2.0.a1 |
| pyrus_communis | pycom05g26060 pycom10g21510 |
| rosa_chinensis | RchiOBHm_Chr5g0014771 |
| rosa_laevigata | RLG00000032139 |
| rosa_multiflora | Rmu_co8256719.1_g000001 Rmu_co8305615.1_g000001 Rmu_sc0001908.1_g000001 Rmu_sc0028154.1_g000002 Rmu_sc0031515.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00061770 |
| rosa_rugosa | Rorug05G0020600 Rorug05G0020700 |
| rosa_samantha | Rh5AG116200 Rh5AG116400 Rh5BG113000 Rh5CG124700 Rh5DG112400 Rh5DG112700 |
| rosa_wichuraiana | Rw5G010030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 791 |
| Acc36I | ACCTGC | 1 cut(s) | 667 |
| AccI | GTMKAC | 3 cut(s) | 105, 250, 727 |
| AccIII | TCCGGA | 1 cut(s) | 23 |
| AciI | CCGC | 6 cut(s) | 62, 198, 280, 399, 567, 674 |
| AclWI | GGATC | 3 cut(s) | 32, 238, 998 |
| AcuI | CTGAAG | 1 cut(s) | 1233 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 515 |
| AgeI | ACCGGT | 1 cut(s) | 169 |
| AgsI | TTSAA | 4 cut(s) | 303, 315, 452, 1279 |
| AjnI | CCWGG | 3 cut(s) | 537, 897, 919 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1159, 1191 |
| AluBI | AGCT | 9 cut(s) | 21, 481, 525, 635, 744, 787, 863, 1032, 1251 |
| AluI | AGCT | 9 cut(s) | 21, 481, 525, 635, 744, 787, 863, 1032, 1251 |
| Alw21I | GWGCWC | 3 cut(s) | 188, 349, 781 |
| Alw26I | GTCTC | 1 cut(s) | 946 |
| AlwI | GGATC | 3 cut(s) | 32, 238, 998 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 944 |
| Ama87I | CYCGRG | 2 cut(s) | 666, 747 |
| Aor13HI | TCCGGA | 1 cut(s) | 23 |
| AoxI | GGCC | 1 cut(s) | 884 |
| ApeKI | GCWGC | 6 cut(s) | 50, 478, 525, 635, 1029, 1157 |
| AsiGI | ACCGGT | 1 cut(s) | 169 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1341 |
| AspLEI | GCGC | 2 cut(s) | 279, 1151 |
| AspS9I | GGNCC | 4 cut(s) | 671, 884, 901, 923 |
| AsuHPI | GGTGA | 4 cut(s) | 184, 373, 1005, 1013 |
| AvaI | CYCGRG | 2 cut(s) | 666, 747 |
| AvaII | GGWCC | 3 cut(s) | 671, 901, 923 |
| AxyI | CCTNAGG | 1 cut(s) | 627 |
| BauI | CACGAG | 1 cut(s) | 774 |
| BbsI | GAAGAC | 1 cut(s) | 1221 |
| Bbv12I | GWGCWC | 3 cut(s) | 188, 349, 781 |
| BbvI | GCAGC | 6 cut(s) | 37, 490, 512, 622, 1041, 1169 |
| BccI | CCATC | 5 cut(s) | 436, 593, 798, 810, 912 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 665, 699 |
| BciT130I | CCWGG | 3 cut(s) | 539, 899, 921 |
| BcoDI | GTCTC | 1 cut(s) | 946 |
| BfaI | CTAG | 4 cut(s) | 864, 954, 996, 1022 |
| BfmI | CTRYAG | 1 cut(s) | 1044 |
| BfuAI | ACCTGC | 1 cut(s) | 667 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 59 |
| BisI | GCNGC | 7 cut(s) | 51, 280, 479, 526, 636, 1030, 1158 |
| BlsI | GCNGC | 7 cut(s) | 52, 281, 480, 527, 637, 1031, 1159 |
| Bme1390I | CCNGG | 3 cut(s) | 539, 899, 921 |
| Bme18I | GGWCC | 3 cut(s) | 671, 901, 923 |
| BmeT110I | CYCGRG | 2 cut(s) | 666, 747 |
| BmgT120I | GGNCC | 4 cut(s) | 671, 884, 901, 923 |
| BmiI | GGNNCC | 3 cut(s) | 130, 672, 810 |
| BmrFI | CCNGG | 3 cut(s) | 539, 899, 921 |
| BpiI | GAAGAC | 1 cut(s) | 1221 |
| Bsa29I | ATCGAT | 2 cut(s) | 758, 1369 |
| BsaAI | YACGTR | 1 cut(s) | 1145 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1278 |
| BsaJI | CCNNGG | 4 cut(s) | 254, 321, 509, 897 |
| BsaWI | WCCGGW | 3 cut(s) | 23, 169, 488 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 515 |
| Bse118I | RCCGGY | 1 cut(s) | 169 |
| Bse1I | ACTGG | 3 cut(s) | 54, 189, 1161 |
| Bse21I | CCTNAGG | 1 cut(s) | 627 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1278 |
| BseAI | TCCGGA | 1 cut(s) | 23 |
| BseBI | CCWGG | 3 cut(s) | 539, 899, 921 |
| BseCI | ATCGAT | 2 cut(s) | 758, 1369 |
| BseDI | CCNNGG | 4 cut(s) | 254, 321, 509, 897 |
| BseGI | GGATG | 4 cut(s) | 404, 469, 809, 1354 |
| BseJI | GATNNNNATC | 1 cut(s) | 1278 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 515 |
| BseMII | CTCAG | 3 cut(s) | 575, 794, 1233 |
| BseNI | ACTGG | 3 cut(s) | 54, 189, 1161 |
| BseRI | GAGGAG | 2 cut(s) | 23, 1308 |
| BseXI | GCAGC | 6 cut(s) | 37, 490, 512, 622, 1041, 1169 |
| BsgI | GTGCAG | 1 cut(s) | 1176 |
| BshFI | GGCC | 1 cut(s) | 886 |
| BshTI | ACCGGT | 1 cut(s) | 169 |
| BshVI | ATCGAT | 2 cut(s) | 758, 1369 |
| BsiHKAI | GWGCWC | 3 cut(s) | 188, 349, 781 |
| BsiHKCI | CYCGRG | 2 cut(s) | 666, 747 |
| BsiSI | CCGG | 4 cut(s) | 24, 86, 170, 489 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 515 |
| BsmAI | GTCTC | 1 cut(s) | 946 |
| BsnI | GGCC | 1 cut(s) | 886 |
| BsoBI | CYCGRG | 2 cut(s) | 666, 747 |
| Bsp1286I | GDGCHC | 3 cut(s) | 188, 349, 781 |
| Bsp13I | TCCGGA | 1 cut(s) | 23 |
| Bsp143I | GATC | 7 cut(s) | 37, 230, 682, 759, 1003, 1010, 1366 |
| BspACI | CCGC | 6 cut(s) | 62, 198, 280, 399, 567, 674 |
| BspANI | GGCC | 1 cut(s) | 886 |
| BspCNI | CTCAG | 3 cut(s) | 574, 793, 1234 |
| BspDI | ATCGAT | 2 cut(s) | 758, 1369 |
| BspEI | TCCGGA | 1 cut(s) | 23 |
| BspLI | GGNNCC | 3 cut(s) | 130, 672, 810 |
| BspMI | ACCTGC | 1 cut(s) | 667 |
| BspPI | GGATC | 3 cut(s) | 32, 238, 998 |
| BsrFI | RCCGGY | 1 cut(s) | 169 |
| BsrI | ACTGG | 3 cut(s) | 54, 189, 1161 |
| BssAI | RCCGGY | 1 cut(s) | 169 |
| BssECI | CCNNGG | 4 cut(s) | 254, 321, 509, 897 |
| BssMI | GATC | 7 cut(s) | 37, 230, 682, 759, 1003, 1010, 1366 |
| BssNAI | GTATAC | 1 cut(s) | 728 |
| BssSI | CACGAG | 1 cut(s) | 774 |
| BssT1I | CCWWGG | 3 cut(s) | 254, 321, 509 |
| Bst1107I | GTATAC | 1 cut(s) | 728 |
| Bst2BI | CACGAG | 1 cut(s) | 774 |
| Bst2UI | CCWGG | 3 cut(s) | 539, 899, 921 |
| Bst4CI | ACNGT | 4 cut(s) | 82, 839, 1048, 1220 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 464, 944 |
| BstBAI | YACGTR | 1 cut(s) | 1145 |
| BstC8I | GCNNGC | 1 cut(s) | 196 |
| BstDEI | CTNAG | 4 cut(s) | 561, 627, 780, 1242 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 513 |
| BstF5I | GGATG | 4 cut(s) | 404, 469, 809, 1354 |
| BstHHI | GCGC | 2 cut(s) | 279, 1151 |
| BstKTI | GATC | 7 cut(s) | 40, 233, 685, 762, 1006, 1013, 1369 |
| BstMAI | GTCTC | 1 cut(s) | 946 |
| BstMBI | GATC | 7 cut(s) | 37, 230, 682, 759, 1003, 1010, 1366 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 50, 59, 464, 534, 641, 860, 944, 1157 |
| BstNI | CCWGG | 3 cut(s) | 539, 899, 921 |
| BstNSI | RCATGY | 2 cut(s) | 345, 390 |
| BstSCI | CCNGG | 3 cut(s) | 537, 897, 919 |
| BstSFI | CTRYAG | 1 cut(s) | 1044 |
| BstV1I | GCAGC | 6 cut(s) | 37, 490, 512, 622, 1041, 1169 |
| BstV2I | GAAGAC | 1 cut(s) | 1221 |
| BstZ17I | GTATAC | 1 cut(s) | 728 |
| Bsu15I | ATCGAT | 2 cut(s) | 758, 1369 |
| Bsu36I | CCTNAGG | 1 cut(s) | 627 |
| BsuRI | GGCC | 1 cut(s) | 886 |
| BsuTUI | ATCGAT | 2 cut(s) | 758, 1369 |
| BtsCI | GGATG | 4 cut(s) | 404, 469, 809, 1354 |
| BtsI | GCAGTG | 1 cut(s) | 106 |
| BtsIMutI | CAGTG | 3 cut(s) | 106, 196, 1168 |
| BveI | ACCTGC | 1 cut(s) | 667 |
| Cac8I | GCNNGC | 1 cut(s) | 196 |
| CaiI | CAGNNNCTG | 1 cut(s) | 944 |
| CfoI | GCGC | 2 cut(s) | 279, 1151 |
| Cfr10I | RCCGGY | 1 cut(s) | 169 |
| Cfr13I | GGNCC | 4 cut(s) | 671, 884, 901, 923 |
| ClaI | ATCGAT | 2 cut(s) | 758, 1369 |
| CspAI | ACCGGT | 1 cut(s) | 169 |
| CviAII | CATG | 4 cut(s) | 119, 342, 387, 396 |
| DdeI | CTNAG | 4 cut(s) | 561, 627, 780, 1242 |
| DpnI | GATC | 7 cut(s) | 39, 232, 684, 761, 1005, 1012, 1368 |
| DpnII | GATC | 7 cut(s) | 37, 230, 682, 759, 1003, 1010, 1366 |
| DraI | TTTAAA | 3 cut(s) | 295, 715, 825 |
| Eco130I | CCWWGG | 3 cut(s) | 254, 321, 509 |
| Eco47I | GGWCC | 3 cut(s) | 671, 901, 923 |
| Eco57I | CTGAAG | 1 cut(s) | 1233 |
| Eco81I | CCTNAGG | 1 cut(s) | 627 |
| Eco88I | CYCGRG | 2 cut(s) | 666, 747 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 513 |
| EcoRII | CCWGG | 3 cut(s) | 537, 897, 919 |
| EcoT14I | CCWWGG | 3 cut(s) | 254, 321, 509 |
| EcoT22I | ATGCAT | 1 cut(s) | 757 |
| ErhI | CCWWGG | 3 cut(s) | 254, 321, 509 |
| FaeI | CATG | 4 cut(s) | 122, 345, 390, 399 |
| FatI | CATG | 4 cut(s) | 118, 341, 386, 395 |
| FauI | CCCGC | 1 cut(s) | 55 |
| FblI | GTMKAC | 3 cut(s) | 105, 250, 727 |
| Fnu4HI | GCNGC | 7 cut(s) | 51, 280, 479, 526, 636, 1030, 1158 |
| FokI | GGATG | 4 cut(s) | 391, 476, 816, 1361 |
| Fsp4HI | GCNGC | 7 cut(s) | 51, 280, 479, 526, 636, 1030, 1158 |
| FspBI | CTAG | 4 cut(s) | 864, 954, 996, 1022 |
| GlaI | GCGC | 2 cut(s) | 278, 1150 |
| GluI | GCNGC | 7 cut(s) | 51, 280, 479, 526, 636, 1030, 1158 |
| HaeIII | GGCC | 1 cut(s) | 886 |
| HapII | CCGG | 4 cut(s) | 24, 86, 170, 489 |
| HhaI | GCGC | 2 cut(s) | 279, 1151 |
| Hin1II | CATG | 4 cut(s) | 122, 345, 390, 399 |
| Hin6I | GCGC | 2 cut(s) | 277, 1149 |
| HinP1I | GCGC | 2 cut(s) | 277, 1149 |
| HindIII | AAGCTT | 1 cut(s) | 785 |
| HinfI | GANTC | 5 cut(s) | 392, 436, 485, 992, 1279 |
| HpaII | CCGG | 4 cut(s) | 24, 86, 170, 489 |
| HphI | GGTGA | 4 cut(s) | 184, 373, 1005, 1013 |
| Hpy166II | GTNNAC | 3 cut(s) | 106, 251, 728 |
| Hpy188I | TCNGA | 4 cut(s) | 351, 435, 783, 1336 |
| Hpy188III | TCNNGA | 6 cut(s) | 24, 440, 747, 996, 1115, 1346 |
| Hpy8I | GTNNAC | 3 cut(s) | 106, 251, 728 |
| Hpy99I | CGWCG | 2 cut(s) | 76, 892 |
| HpyAV | CCTTC | 2 cut(s) | 309, 1356 |
| HpyCH4III | ACNGT | 4 cut(s) | 82, 839, 1048, 1220 |
| HpyCH4IV | ACGT | 2 cut(s) | 890, 1144 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 50, 59, 464, 534, 641, 860, 944, 1157 |
| HpyF3I | CTNAG | 4 cut(s) | 561, 627, 780, 1242 |
| HpySE526I | ACGT | 2 cut(s) | 890, 1144 |
| Hsp92II | CATG | 4 cut(s) | 122, 345, 390, 399 |
| HspAI | GCGC | 2 cut(s) | 277, 1149 |
| Kpn2I | TCCGGA | 1 cut(s) | 23 |
| Kzo9I | GATC | 7 cut(s) | 37, 230, 682, 759, 1003, 1010, 1366 |
| LmnI | GCTCC | 6 cut(s) | 26, 49, 134, 137, 749, 1248 |
| Lsp1109I | GCAGC | 6 cut(s) | 37, 490, 512, 622, 1041, 1169 |
| MaeI | CTAG | 4 cut(s) | 864, 954, 996, 1022 |
| MaeII | ACGT | 2 cut(s) | 890, 1144 |
| MaeIII | GTNAC | 2 cut(s) | 172, 491 |
| MalI | GATC | 7 cut(s) | 39, 232, 684, 761, 1005, 1012, 1368 |
| MboI | GATC | 7 cut(s) | 37, 230, 682, 759, 1003, 1010, 1366 |
| MboII | GAAGA | 2 cut(s) | 854, 1226 |
| MfeI | CAATTG | 1 cut(s) | 645 |
| MhlI | GDGCHC | 3 cut(s) | 188, 349, 781 |
| MluCI | AATT | 8 cut(s) | 304, 381, 545, 573, 611, 645, 1130, 1167 |
| MlyI | GAGTC | 1 cut(s) | 430 |
| Mph1103I | ATGCAT | 1 cut(s) | 757 |
| MroI | TCCGGA | 1 cut(s) | 23 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1341 |
| MseI | TTAA | 7 cut(s) | 294, 572, 714, 824, 987, 1067, 1308 |
| MslI | CAYNNNNRTG | 1 cut(s) | 340 |
| MspA1I | CMGCKG | 2 cut(s) | 481, 525 |
| MspI | CCGG | 4 cut(s) | 24, 86, 170, 489 |
| MspR9I | CCNGG | 3 cut(s) | 539, 899, 921 |
| MunI | CAATTG | 1 cut(s) | 645 |
| MvaI | CCWGG | 3 cut(s) | 539, 899, 921 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 50, 59, 464, 534, 641, 860, 944, 1157 |
| NdeII | GATC | 7 cut(s) | 37, 230, 682, 759, 1003, 1010, 1366 |
| NlaIII | CATG | 4 cut(s) | 122, 345, 390, 399 |
| NlaIV | GGNNCC | 3 cut(s) | 130, 672, 810 |
| NmeAIII | GCCGAG | 1 cut(s) | 1222 |
| NmuCI | GTSAC | 2 cut(s) | 172, 491 |
| NsiI | ATGCAT | 1 cut(s) | 757 |
| NspI | RCATGY | 2 cut(s) | 345, 390 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1084 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1341 |
| PfeI | GAWTC | 4 cut(s) | 392, 485, 992, 1279 |
| PinAI | ACCGGT | 1 cut(s) | 169 |
| PkrI | GCNGC | 7 cut(s) | 52, 281, 480, 527, 637, 1031, 1159 |
| PleI | GAGTC | 1 cut(s) | 430 |
| PpsI | GAGTC | 1 cut(s) | 430 |
| Ppu21I | YACGTR | 1 cut(s) | 1145 |
| PsiI | TTATAA | 1 cut(s) | 791 |
| Psp6I | CCWGG | 3 cut(s) | 537, 897, 919 |
| PspGI | CCWGG | 3 cut(s) | 537, 897, 919 |
| PspN4I | GGNNCC | 3 cut(s) | 130, 672, 810 |
| PspPI | GGNCC | 4 cut(s) | 671, 884, 901, 923 |
| PstNI | CAGNNNCTG | 1 cut(s) | 944 |
| PvuII | CAGCTG | 2 cut(s) | 481, 525 |
| RseI | CAYNNNNRTG | 1 cut(s) | 340 |
| SaqAI | TTAA | 7 cut(s) | 294, 572, 714, 824, 987, 1067, 1308 |
| SatI | GCNGC | 7 cut(s) | 51, 280, 479, 526, 636, 1030, 1158 |
| Sau3AI | GATC | 7 cut(s) | 37, 230, 682, 759, 1003, 1010, 1366 |
| Sau96I | GGNCC | 4 cut(s) | 671, 884, 901, 923 |
| SchI | GAGTC | 1 cut(s) | 430 |
| ScrFI | CCNGG | 3 cut(s) | 539, 899, 921 |
| SduI | GDGCHC | 3 cut(s) | 188, 349, 781 |
| SfcI | CTRYAG | 1 cut(s) | 1044 |
| SgrAI | CRCCGGYG | 1 cut(s) | 169 |
| SinI | GGWCC | 3 cut(s) | 671, 901, 923 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 340 |
| Sse9I | AATT | 8 cut(s) | 304, 381, 545, 573, 611, 645, 1130, 1167 |
| SsiI | CCGC | 6 cut(s) | 62, 198, 280, 399, 567, 674 |
| SspI | AATATT | 1 cut(s) | 1056 |
| SspMI | CTAG | 4 cut(s) | 864, 954, 996, 1022 |
| StyD4I | CCNGG | 3 cut(s) | 537, 897, 919 |
| StyI | CCWWGG | 3 cut(s) | 254, 321, 509 |
| TaaI | ACNGT | 4 cut(s) | 82, 839, 1048, 1220 |
| TaiI | ACGT | 2 cut(s) | 893, 1147 |
| TaqI | TCGA | 3 cut(s) | 758, 1078, 1369 |
| TasI | AATT | 8 cut(s) | 304, 381, 545, 573, 611, 645, 1130, 1167 |
| TauI | GCSGC | 1 cut(s) | 282 |
| TfiI | GAWTC | 4 cut(s) | 392, 485, 992, 1279 |
| Tru1I | TTAA | 7 cut(s) | 294, 572, 714, 824, 987, 1067, 1308 |
| Tru9I | TTAA | 7 cut(s) | 294, 572, 714, 824, 987, 1067, 1308 |
| TscAI | CASTG | 3 cut(s) | 106, 196, 1168 |
| TseFI | GTSAC | 2 cut(s) | 172, 491 |
| TseI | GCWGC | 6 cut(s) | 50, 478, 525, 635, 1029, 1157 |
| Tsp45I | GTSAC | 2 cut(s) | 172, 491 |
| TspDTI | ATGAA | 3 cut(s) | 107, 324, 1239 |
| TspRI | CASTG | 3 cut(s) | 106, 196, 1168 |
| VpaK11BI | GGWCC | 3 cut(s) | 671, 901, 923 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 513 |
| XbaI | TCTAGA | 1 cut(s) | 995 |
| XceI | RCATGY | 2 cut(s) | 345, 390 |
| XmiI | GTMKAC | 3 cut(s) | 105, 250, 727 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1341 |
| XspI | CTAG | 4 cut(s) | 864, 954, 996, 1022 |
| Zsp2I | ATGCAT | 1 cut(s) | 757 |