Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0028154.1

Orthogroup ID

OG0002807

Physical Location & Seq

Genomic Coordinates Reverse (-)

4821 .. 15495

Gene Structure 10675 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0028154.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1977 bp

ctggattctgggcacaaaggtgcttgtccctggagaggaaacagctgcccagaaagcttggtgcaattccctcctactcctcagtctgccttaattggtgggtataaggatagatgtgatggacttttgcaatttcactcactccctaaggtagctgcctctgtaattgagcaaatatgggtttctcggggtccacagattgaccgtcttctgtcccagtcccagaattttatggcaggagatgtagatattaaaccagaaagtataccagaattcgaaagctctcgagatggagcaatctgtttatattctcgtgcacagaggcttataagtctttgtggatgggaaccaagatggcttttgaatattcaagactatgaggaacattctgcccaatcagctagaaatggatattctctcgggcctagctatgcccaggtccatctttcacaggatcctggagcaagcaagaaagctatttcagcttctgctagaaaggataatggaaagagtaaagttttagttaaggaatccagaggtgatctcaggtcacctttgctggattgcagcttatgtggtgctacagtcagaattttggatttcttaactgttcctcgacctgcacgtttttctccgaacaacattgatattcctgacacaagcaaaaagatgggattgacacgtggtgcaagtgcagccagtggaattagtggttgggttgctgctgacgatgcaaaagaacatactgaagaccgtgatgaagtagcaacaacaactgaagggaatttgattccaaatgcagatgttgatttgaatcttacaatggcagggggtttaacttttaaccggttcggcagagcaggaatggctgataatattaatgatgcagatatgggcagagatctaatgattgggcagccacaaggcagtgaggttggggatcgtgcggcttcatatgaatcaaggggtcccagctctcgtaaacggagtttggaaaaaggaggcagctctgttgataggccacatttaaggacgcagcaggctgatagtgttgaaggaactgtcattgatcgtgatggtgatgaagttacagatggtagacaagattcagctggaccttcaaaacgagcccgcgattcagattttgtagatacatactgttcatctggtgccggtcccagtcattcgatgggtcttgaaatttatacggagggtaatagaggtgcttcatttccacaaggaagtgaccaatacgttggaatccattcgactagggattcagcacgtgcatcttcagtcattgcaatggatacaattggtcacagttcagatgatgactctatggcaagtgttgaaaatcatccgggagatattgatgatattcatttcccctcatctagtacatatggaaatctggacatgaatgagacatcagaagtgaattatagtaatcaagctcaacagagcattggttttcaaccagttgctgatgtagttcctgaggaaatgggtgttagtagtactaatgatggggaagaaatcttcaacgctgaaactttgactgctcaggcccgggatgggtttagctttgggatgagtggagggagtgttggaatgtgtgctagtcatgaagctgagattcatggggctgatgtatctgttcatagagcagatagtgtagttggtgatgtggaacccagaacagaagatgctgagaatcagggccagacaggcgaatctgcaccagatcctggactgatggatgaaattgtccctgatgaaataaatagggaagatcctcaaggtgatagccaggagatgctatctcgatctgtagggagggctgatagtggctcaaagattgatggaagttgtttgagatatgaactaaatcttagaatatcgaaaatgtatgaacaattgttgttccctgcaactcgctctaatgttattgttaacagtgatgatgtgaggtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0008150 GO:0009966 GO:0009968 GO:0010646 GO:0010648 GO:0010941 GO:0012505 GO:0016020 GO:0019899 GO:0019900 GO:0019901 GO:0023051 GO:0023057 GO:0031090 GO:0031965 GO:0031967 GO:0031975 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0060548 GO:0065007 GO:1901099 GO:2001233 GO:2001234 GO:2001236 GO:2001237 GO:2001239 GO:2001240

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C3HC

Protein Analysis

658

Amino Acids

70.67

Weight (kDa)

4.66

Isoelectric Point (pI)

46.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002807)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17210
fragaria_vesca	FvH4_3g05100 FvH4_3g05100 FvH4_3g05100 FvH4_3g05100 FvH4_3g05100 FvH4_3g05100
malus_domestica	MD03G1137700.v1.1 MD10G1258600.v1.1
prunus_persica	Prupe.4G085100_v2.0.a1 Prupe.4G085100_v2.0.a1 Prupe.4G085100_v2.0.a1 Prupe.4G085100_v2.0.a1 Prupe.4G085100_v2.0.a1 Prupe.4G085100_v2.0.a1 Prupe.4G085100_v2.0.a1 Prupe.4G085100_v2.0.a1 Prupe.4G085100_v2.0.a1 Prupe.4G085100_v2.0.a1 Prupe.4G085100_v2.0.a1
pyrus_communis	pycom05g26060 pycom10g21510
rosa_chinensis	RchiOBHm_Chr5g0014771
rosa_laevigata	RLG00000032139
rosa_multiflora	Rmu_co8256719.1_g000001 Rmu_co8305615.1_g000001 Rmu_sc0001908.1_g000001 Rmu_sc0028154.1_g000002 Rmu_sc0031515.1_g000001
rosa_roxburghii	Rroxscaffold_1G00061770
rosa_rugosa	Rorug05G0020600 Rorug05G0020700
rosa_samantha	Rh5AG116200 Rh5AG116400 Rh5BG113000 Rh5CG124700 Rh5DG112400 Rh5DG112700
rosa_wichuraiana	Rw5G010030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	329
Acc36I	ACCTGC	1 cut(s)	628
AccB1I	GGYRCC	1 cut(s)	1169
AccB7I	CCANNNNNTGG	1 cut(s)	1751
AccI	GTMKAC	2 cut(s)	265, 1099
AccII	CGCG	1 cut(s)	1134
AciI	CCGC	2 cut(s)	947, 1132
AclWI	GGATC	5 cut(s)	449, 462, 948, 1742, 1790
AcsI	RAATTY	5 cut(s)	226, 272, 591, 784, 1200
AcuI	CTGAAG	3 cut(s)	768, 798, 1278
AcvI	CACGTG	2 cut(s)	683, 1286
AdeI	CACNNNGTG	1 cut(s)	686
AfaI	GTAC	2 cut(s)	1402, 1522
AfiI	CCNNNNNNNGG	3 cut(s)	35, 1578, 1751
AflIII	ACRYGT	1 cut(s)	680
AgeI	ACCGGT	1 cut(s)	846
AgsI	TTSAA	9 cut(s)	364, 371, 814, 1055, 1122, 1199, 1355, 1478, 1546
AjnI	CCWGG	5 cut(s)	29, 435, 457, 1750, 1812
AjuI	GAANNNNNNNTTGG	2 cut(s)	697, 729
AleI	CACNNNNGTG	1 cut(s)	18
Alw21I	GWGCWC	1 cut(s)	319
Alw26I	GTCTC	1 cut(s)	1421
Alw44I	GTGCAC	1 cut(s)	315
AlwI	GGATC	5 cut(s)	449, 462, 948, 1742, 1790
AlwNI	CAGNNNCTG	3 cut(s)	488, 1487, 1751
Ama87I	CYCGRG	4 cut(s)	186, 285, 419, 1572
AoxI	GGCC	4 cut(s)	422, 1019, 1569, 1723
ApaLI	GTGCAC	1 cut(s)	315
ApeKI	GCWGC	8 cut(s)	45, 155, 567, 695, 722, 916, 1005, 1036
ApoI	RAATTY	5 cut(s)	226, 272, 591, 784, 1200
AseI	ATTAAT	1 cut(s)	879
AsiGI	ACCGGT	1 cut(s)	846
Asp700I	GAANNNNTTC	1 cut(s)	1264
AspS9I	GGNCC	8 cut(s)	191, 422, 439, 968, 1115, 1175, 1570, 1723
AsuC2I	CCSGG	3 cut(s)	1365, 1573, 1574
AsuHPI	GGTGA	5 cut(s)	543, 551, 1091, 1697, 1817
AsuII	TTCGAA	1 cut(s)	276
AvaI	CYCGRG	4 cut(s)	186, 285, 419, 1572
AvaII	GGWCC	5 cut(s)	191, 439, 968, 1115, 1175
AxyI	CCTNAGG	2 cut(s)	147, 1500
BaeGI	GKGCMC	2 cut(s)	15, 319
BamHI	GGATCC	1 cut(s)	454
BanI	GGYRCC	1 cut(s)	1169
BanII	GRGCYC	1 cut(s)	1132
BauI	CACGAG	1 cut(s)	312
BbrPI	CACGTG	2 cut(s)	683, 1286
BbsI	GAAGAC	2 cut(s)	200, 756
Bbv12I	GWGCWC	1 cut(s)	319
BbvI	GCAGC	8 cut(s)	32, 142, 579, 707, 709, 928, 1017, 1048
BciT130I	CCWGG	5 cut(s)	31, 437, 459, 1752, 1814
BciVI	GTATCC	1 cut(s)	1303
BcnI	CCSGG	3 cut(s)	1365, 1573, 1574
BcoDI	GTCTC	1 cut(s)	1421
BfaI	CTAG	6 cut(s)	402, 426, 492, 1272, 1398, 1623
BfmI	CTRYAG	2 cut(s)	582, 1833
BfuAI	ACCTGC	1 cut(s)	628
BfuI	GTATCC	1 cut(s)	1303
BglI	GCCNNNNNGGC	1 cut(s)	1731
BglII	AGATCT	1 cut(s)	901
BisI	GCNGC	9 cut(s)	46, 156, 568, 696, 723, 917, 948, 1006, 1037
BlsI	GCNGC	9 cut(s)	47, 157, 569, 697, 724, 918, 949, 1007, 1038
BmcAI	AGTACT	1 cut(s)	1522
Bme1390I	CCNGG	8 cut(s)	31, 437, 459, 1365, 1573, 1574, 1752, 1814
Bme18I	GGWCC	5 cut(s)	191, 439, 968, 1115, 1175
BmeT110I	CYCGRG	4 cut(s)	186, 285, 419, 1572
BmgT120I	GGNCC	8 cut(s)	191, 422, 439, 968, 1115, 1175, 1570, 1723
BmiI	GGNNCC	8 cut(s)	192, 348, 456, 969, 970, 1171, 1177, 1695
BmrFI	CCNGG	8 cut(s)	31, 437, 459, 1365, 1573, 1574, 1752, 1814
BmrI	ACTGGG	2 cut(s)	211, 1173
BmsI	GCATC	5 cut(s)	721, 874, 1298, 1699, 1809
BmuI	ACTGGG	2 cut(s)	211, 1173
BpiI	GAAGAC	2 cut(s)	200, 756
BplI	GAGNNNNNCTC	2 cut(s)	528, 560
BpmI	CTGGAG	2 cut(s)	52, 480
Bpu10I	CCTNAGC	1 cut(s)	1566
Bpu14I	TTCGAA	1 cut(s)	276
BpuEI	CTTGAG	1 cut(s)	1785
BpuMI	CCSGG	3 cut(s)	1365, 1573, 1574
BsaAI	YACGTR	2 cut(s)	683, 1286
BsaBI	GATNNNNATC	1 cut(s)	813
BsaJI	CCNNGG	3 cut(s)	29, 435, 1572
BsaWI	WCCGGW	1 cut(s)	846
BsaXI	ACNNNNNCTCC	2 cut(s)	1593, 1623
Bsc4I	CCNNNNNNNGG	3 cut(s)	35, 1578, 1751
Bse118I	RCCGGY	2 cut(s)	846, 1172
Bse1I	ACTGG	4 cut(s)	217, 699, 1179, 1481
Bse21I	CCTNAGG	2 cut(s)	147, 1500
Bse3DI	GCAATG	2 cut(s)	1299, 1311
Bse8I	GATNNNNATC	1 cut(s)	813
BseBI	CCWGG	5 cut(s)	31, 437, 459, 1752, 1814
BseDI	CCNNGG	3 cut(s)	29, 435, 1572
BseGI	GGATG	5 cut(s)	347, 1360, 1582, 1599, 1768
BseJI	GATNNNNATC	1 cut(s)	813
BseLI	CCNNNNNNNGG	3 cut(s)	35, 1578, 1751
BseMI	GCAATG	2 cut(s)	1299, 1311
BseMII	CTCAG	6 cut(s)	95, 559, 1491, 1580, 1626, 1704
BseNI	ACTGG	4 cut(s)	217, 699, 1179, 1481
BseRI	GAGGAG	1 cut(s)	69
BseSI	GKGCMC	2 cut(s)	15, 319
BseXI	GCAGC	8 cut(s)	32, 142, 579, 707, 709, 928, 1017, 1048
BseYI	CCCAGC	1 cut(s)	971
BsgI	GTGCAG	3 cut(s)	606, 714, 1725
Bsh1236I	CGCG	1 cut(s)	1134
BshFI	GGCC	4 cut(s)	424, 1021, 1571, 1725
BshNI	GGYRCC	1 cut(s)	1169
BshTI	ACCGGT	1 cut(s)	846
BsiHKAI	GWGCWC	1 cut(s)	319
BsiHKCI	CYCGRG	4 cut(s)	186, 285, 419, 1572
BsiSI	CCGG	4 cut(s)	847, 1173, 1364, 1573
BslFI	GGGAC	6 cut(s)	12, 199, 205, 954, 1161, 1757
BslI	CCNNNNNNNGG	3 cut(s)	35, 1578, 1751
BsmAI	GTCTC	1 cut(s)	1421
BsmFI	GGGAC	6 cut(s)	12, 199, 205, 954, 1161, 1757
BsnI	GGCC	4 cut(s)	424, 1021, 1571, 1725
BsoBI	CYCGRG	4 cut(s)	186, 285, 419, 1572
Bsp119I	TTCGAA	1 cut(s)	276
Bsp1286I	GDGCHC	3 cut(s)	15, 319, 1132
Bsp143I	GATC	8 cut(s)	454, 541, 901, 940, 1069, 1747, 1795, 1829
BspACI	CCGC	2 cut(s)	947, 1132
BspANI	GGCC	4 cut(s)	424, 1021, 1571, 1725
BspCNI	CTCAG	6 cut(s)	94, 558, 1492, 1579, 1627, 1705
BspFNI	CGCG	1 cut(s)	1134
BspHI	TCATGA	1 cut(s)	1627
BspLI	GGNNCC	8 cut(s)	192, 348, 456, 969, 970, 1171, 1177, 1695
BspMI	ACCTGC	1 cut(s)	628
BspPI	GGATC	5 cut(s)	449, 462, 948, 1742, 1790
BspT104I	TTCGAA	1 cut(s)	276
BspT107I	GGYRCC	1 cut(s)	1169
BsrDI	GCAATG	2 cut(s)	1299, 1311
BsrFI	RCCGGY	2 cut(s)	846, 1172
BsrI	ACTGG	4 cut(s)	217, 699, 1179, 1481
BssAI	RCCGGY	2 cut(s)	846, 1172
BssECI	CCNNGG	3 cut(s)	29, 435, 1572
BssMI	GATC	8 cut(s)	454, 541, 901, 940, 1069, 1747, 1795, 1829
BssNAI	GTATAC	1 cut(s)	266
BssSI	CACGAG	1 cut(s)	312
Bst1107I	GTATAC	1 cut(s)	266
Bst2BI	CACGAG	1 cut(s)	312
Bst2UI	CCWGG	5 cut(s)	31, 437, 459, 1752, 1814
Bst4CI	ACNGT	8 cut(s)	206, 586, 610, 755, 1063, 1160, 1325, 1961
BstBAI	YACGTR	2 cut(s)	683, 1286
BstBI	TTCGAA	1 cut(s)	276
BstC8I	GCNNGC	3 cut(s)	466, 1041, 1132
BstDEI	CTNAG	8 cut(s)	81, 147, 545, 1500, 1566, 1635, 1713, 1895
BstEII	GGTNACC	1 cut(s)	549
BstF5I	GGATG	5 cut(s)	347, 1360, 1582, 1599, 1768
BstFNI	CGCG	1 cut(s)	1134
BstKTI	GATC	8 cut(s)	457, 544, 904, 943, 1072, 1750, 1798, 1832
BstMAI	GTCTC	1 cut(s)	1421
BstMBI	GATC	8 cut(s)	454, 541, 901, 940, 1069, 1747, 1795, 1829
BstMWI	GCNNNNNNNGC	7 cut(s)	54, 398, 482, 695, 731, 866, 1731
BstNI	CCWGG	5 cut(s)	31, 437, 459, 1752, 1814
BstPI	GGTNACC	1 cut(s)	549
BstSCI	CCNGG	8 cut(s)	29, 435, 457, 1363, 1571, 1572, 1750, 1812
BstSFI	CTRYAG	2 cut(s)	582, 1833
BstSLI	GKGCMC	2 cut(s)	15, 319
BstUI	CGCG	1 cut(s)	1134
BstV1I	GCAGC	8 cut(s)	32, 142, 579, 707, 709, 928, 1017, 1048
BstV2I	GAAGAC	2 cut(s)	200, 756
BstX2I	RGATCY	4 cut(s)	454, 901, 1747, 1795
BstXI	CCANNNNNNTGG	1 cut(s)	1256
BstYI	RGATCY	4 cut(s)	454, 901, 1747, 1795
BstZ17I	GTATAC	1 cut(s)	266
Bsu36I	CCTNAGG	2 cut(s)	147, 1500
BsuI	GTATCC	1 cut(s)	1303
BsuRI	GGCC	4 cut(s)	424, 1021, 1571, 1725
BtsCI	GGATG	5 cut(s)	347, 1360, 1582, 1599, 1768
BtsI	GCAGTG	1 cut(s)	934
BtsIMutI	CAGTG	3 cut(s)	706, 934, 1966
BveI	ACCTGC	1 cut(s)	628
Cac8I	GCNNGC	3 cut(s)	466, 1041, 1132
CaiI	CAGNNNCTG	3 cut(s)	488, 1487, 1751
CciI	TCATGA	1 cut(s)	1627
Cfr10I	RCCGGY	2 cut(s)	846, 1172
Cfr13I	GGNCC	8 cut(s)	191, 422, 439, 968, 1115, 1175, 1570, 1723
Cfr9I	CCCGGG	1 cut(s)	1572
CseI	GACGC	1 cut(s)	1042
Csp6I	GTAC	2 cut(s)	1401, 1521
CspAI	ACCGGT	1 cut(s)	846
CviAII	CATG	3 cut(s)	1420, 1628, 1643
CviQI	GTAC	2 cut(s)	1401, 1521
DdeI	CTNAG	8 cut(s)	81, 147, 545, 1500, 1566, 1635, 1713, 1895
DpnI	GATC	8 cut(s)	456, 543, 903, 942, 1071, 1749, 1797, 1831
DpnII	GATC	8 cut(s)	454, 541, 901, 940, 1069, 1747, 1795, 1829
DraIII	CACNNNGTG	1 cut(s)	686
Eco24I	GRGCYC	1 cut(s)	1132
Eco47I	GGWCC	5 cut(s)	191, 439, 968, 1115, 1175
Eco57I	CTGAAG	3 cut(s)	768, 798, 1278
Eco72I	CACGTG	2 cut(s)	683, 1286
Eco81I	CCTNAGG	2 cut(s)	147, 1500
Eco88I	CYCGRG	4 cut(s)	186, 285, 419, 1572
Eco91I	GGTNACC	1 cut(s)	549
EcoO109I	RGGNCCY	1 cut(s)	968
EcoO65I	GGTNACC	1 cut(s)	549
EcoRI	GAATTC	1 cut(s)	272
EcoRII	CCWGG	5 cut(s)	29, 435, 457, 1750, 1812
EcoT38I	GRGCYC	1 cut(s)	1132
FaeI	CATG	3 cut(s)	1423, 1631, 1646
FaqI	GGGAC	6 cut(s)	12, 199, 205, 954, 1161, 1757
FatI	CATG	3 cut(s)	1419, 1627, 1642
FauI	CCCGC	1 cut(s)	1139
FauNDI	CATATG	2 cut(s)	955, 1405
FblI	GTMKAC	2 cut(s)	265, 1099
Fnu4HI	GCNGC	9 cut(s)	46, 156, 568, 696, 723, 917, 948, 1006, 1037
FokI	GGATG	5 cut(s)	354, 1347, 1589, 1606, 1775
FriOI	GRGCYC	1 cut(s)	1132
Fsp4HI	GCNGC	9 cut(s)	46, 156, 568, 696, 723, 917, 948, 1006, 1037
FspBI	CTAG	6 cut(s)	402, 426, 492, 1272, 1398, 1623
GluI	GCNGC	9 cut(s)	46, 156, 568, 696, 723, 917, 948, 1006, 1037
GsaI	CCCAGC	1 cut(s)	975
GsuI	CTGGAG	2 cut(s)	52, 480
HaeIII	GGCC	4 cut(s)	424, 1021, 1571, 1725
HapII	CCGG	4 cut(s)	847, 1173, 1364, 1573
HgaI	GACGC	1 cut(s)	1042
Hin1II	CATG	3 cut(s)	1423, 1631, 1646
HincII	GTYRAC	1 cut(s)	1957
HindII	GTYRAC	1 cut(s)	1957
HindIII	AAGCTT	1 cut(s)	55
HpaI	GTTAAC	1 cut(s)	1957
HpaII	CCGG	4 cut(s)	847, 1173, 1364, 1573
HphI	GGTGA	5 cut(s)	543, 551, 1091, 1697, 1817
Hpy166II	GTNNAC	6 cut(s)	194, 266, 317, 983, 1100, 1957
Hpy188I	TCNGA	5 cut(s)	590, 636, 1141, 1330, 1435
Hpy8I	GTNNAC	6 cut(s)	194, 266, 317, 983, 1100, 1957
HpyAV	CCTTC	3 cut(s)	773, 1049, 1128
HpyCH4III	ACNGT	8 cut(s)	206, 586, 610, 755, 1063, 1160, 1325, 1961
HpyCH4IV	ACGT	4 cut(s)	625, 682, 1254, 1285
HpyF10VI	GCNNNNNNNGC	7 cut(s)	54, 398, 482, 695, 731, 866, 1731
HpyF3I	CTNAG	8 cut(s)	81, 147, 545, 1500, 1566, 1635, 1713, 1895
HpySE526I	ACGT	4 cut(s)	625, 682, 1254, 1285
Hsp92II	CATG	3 cut(s)	1423, 1631, 1646
KflI	GGGWCCC	1 cut(s)	968
KspAI	GTTAAC	1 cut(s)	1957
Kzo9I	GATC	8 cut(s)	454, 541, 901, 940, 1069, 1747, 1795, 1829
LmnI	GCTCC	2 cut(s)	293, 461
Lsp1109I	GCAGC	8 cut(s)	32, 142, 579, 707, 709, 928, 1017, 1048
LweI	GCATC	5 cut(s)	721, 874, 1298, 1699, 1809
MaeI	CTAG	6 cut(s)	402, 426, 492, 1272, 1398, 1623
MaeII	ACGT	4 cut(s)	625, 682, 1254, 1285
MaeIII	GTNAC	4 cut(s)	549, 1087, 1244, 1319
MalI	GATC	8 cut(s)	456, 543, 903, 942, 1071, 1749, 1797, 1831
MboI	GATC	8 cut(s)	454, 541, 901, 940, 1069, 1747, 1795, 1829
MboII	GAAGA	7 cut(s)	200, 761, 1284, 1534, 1547, 1718, 1805
MfeI	CAATTG	2 cut(s)	1314, 1919
MflI	RGATCY	4 cut(s)	454, 901, 1747, 1795
MhlI	GDGCHC	3 cut(s)	15, 319, 1132
MlyI	GAGTC	1 cut(s)	1331
MmeI	TCCRAC	2 cut(s)	1237, 1591
MroXI	GAANNNNTTC	1 cut(s)	1264
MseI	TTAA	9 cut(s)	92, 252, 525, 605, 836, 843, 879, 1028, 1956
MslI	CAYNNNNRTG	2 cut(s)	18, 1304
MspA1I	CMGCKG	2 cut(s)	45, 1112
MspI	CCGG	4 cut(s)	847, 1173, 1364, 1573
MspR9I	CCNGG	8 cut(s)	31, 437, 459, 1365, 1573, 1574, 1752, 1814
MunI	CAATTG	2 cut(s)	1314, 1919
MvaI	CCWGG	5 cut(s)	31, 437, 459, 1752, 1814
MvnI	CGCG	1 cut(s)	1134
MwoI	GCNNNNNNNGC	7 cut(s)	54, 398, 482, 695, 731, 866, 1731
NciI	CCSGG	3 cut(s)	1365, 1573, 1574
NdeI	CATATG	2 cut(s)	955, 1405
NdeII	GATC	8 cut(s)	454, 541, 901, 940, 1069, 1747, 1795, 1829
NlaIII	CATG	3 cut(s)	1423, 1631, 1646
NlaIV	GGNNCC	8 cut(s)	192, 348, 456, 969, 970, 1171, 1177, 1695
NmuCI	GTSAC	3 cut(s)	549, 1244, 1319
NspV	TTCGAA	1 cut(s)	276
OliI	CACNNNNGTG	1 cut(s)	18
PaeR7I	CTCGAG	1 cut(s)	285
PagI	TCATGA	1 cut(s)	1627
PcsI	WCGNNNNNNNCGW	1 cut(s)	622
PdmI	GAANNNNTTC	1 cut(s)	1264
PflMI	CCANNNNNTGG	1 cut(s)	1751
PfoI	TCCNGGA	3 cut(s)	457, 1363, 1750
PinAI	ACCGGT	1 cut(s)	846
PkrI	GCNGC	9 cut(s)	47, 157, 569, 697, 724, 918, 949, 1007, 1038
PleI	GAGTC	1 cut(s)	1331
PmaCI	CACGTG	2 cut(s)	683, 1286
PmlI	CACGTG	2 cut(s)	683, 1286
PpsI	GAGTC	1 cut(s)	1331
Ppu21I	YACGTR	2 cut(s)	683, 1286
PpuMI	RGGWCCY	1 cut(s)	968
PshBI	ATTAAT	1 cut(s)	879
PsiI	TTATAA	1 cut(s)	329
Psp5II	RGGWCCY	1 cut(s)	968
Psp6I	CCWGG	5 cut(s)	29, 435, 457, 1750, 1812
PspCI	CACGTG	2 cut(s)	683, 1286
PspEI	GGTNACC	1 cut(s)	549
PspFI	CCCAGC	1 cut(s)	971
PspGI	CCWGG	5 cut(s)	29, 435, 457, 1750, 1812
PspN4I	GGNNCC	8 cut(s)	192, 348, 456, 969, 970, 1171, 1177, 1695
PspPI	GGNCC	8 cut(s)	191, 422, 439, 968, 1115, 1175, 1570, 1723
PspPPI	RGGWCCY	1 cut(s)	968
PstNI	CAGNNNCTG	3 cut(s)	488, 1487, 1751
PsuI	RGATCY	4 cut(s)	454, 901, 1747, 1795
PvuII	CAGCTG	2 cut(s)	45, 1112
RsaI	GTAC	2 cut(s)	1402, 1522
RsaNI	GTAC	2 cut(s)	1401, 1521
RseI	CAYNNNNRTG	2 cut(s)	18, 1304
SaqAI	TTAA	9 cut(s)	92, 252, 525, 605, 836, 843, 879, 1028, 1956
SatI	GCNGC	9 cut(s)	46, 156, 568, 696, 723, 917, 948, 1006, 1037
Sau3AI	GATC	8 cut(s)	454, 541, 901, 940, 1069, 1747, 1795, 1829
Sau96I	GGNCC	8 cut(s)	191, 422, 439, 968, 1115, 1175, 1570, 1723
ScaI	AGTACT	1 cut(s)	1522
SchI	GAGTC	1 cut(s)	1331
ScrFI	CCNGG	8 cut(s)	31, 437, 459, 1365, 1573, 1574, 1752, 1814
SduI	GDGCHC	3 cut(s)	15, 319, 1132
SfaNI	GCATC	5 cut(s)	721, 874, 1298, 1699, 1809
SfcI	CTRYAG	2 cut(s)	582, 1833
Sfr274I	CTCGAG	1 cut(s)	285
SfuI	TTCGAA	1 cut(s)	276
SinI	GGWCC	5 cut(s)	191, 439, 968, 1115, 1175
SlaI	CTCGAG	1 cut(s)	285
SmaI	CCCGGG	1 cut(s)	1574
SmiMI	CAYNNNNRTG	2 cut(s)	18, 1304
SmlI	CTYRAG	2 cut(s)	285, 1800
SmoI	CTYRAG	2 cut(s)	285, 1800
SsiI	CCGC	2 cut(s)	947, 1132
SspI	AATATT	2 cut(s)	367, 877
SspMI	CTAG	6 cut(s)	402, 426, 492, 1272, 1398, 1623
StyD4I	CCNGG	8 cut(s)	29, 435, 457, 1363, 1571, 1572, 1750, 1812
TaaI	ACNGT	8 cut(s)	206, 586, 610, 755, 1063, 1160, 1325, 1961
TaiI	ACGT	4 cut(s)	628, 685, 1257, 1288
TaqI	TCGA	7 cut(s)	276, 286, 616, 1187, 1268, 1828, 1904
TatI	WGTACW	2 cut(s)	1400, 1520
TauI	GCSGC	1 cut(s)	950
Tru1I	TTAA	9 cut(s)	92, 252, 525, 605, 836, 843, 879, 1028, 1956
Tru9I	TTAA	9 cut(s)	92, 252, 525, 605, 836, 843, 879, 1028, 1956
TscAI	CASTG	3 cut(s)	706, 934, 1966
TseFI	GTSAC	3 cut(s)	549, 1244, 1319
TseI	GCWGC	8 cut(s)	45, 155, 567, 695, 722, 916, 1005, 1036
Tsp45I	GTSAC	3 cut(s)	549, 1244, 1319
TspGWI	ACGGA	2 cut(s)	1000, 1223
TspMI	CCCGGG	1 cut(s)	1572
TspRI	CASTG	3 cut(s)	706, 934, 1966
Van91I	CCANNNNNTGG	1 cut(s)	1751
VneI	GTGCAC	1 cut(s)	315
VpaK11BI	GGWCC	5 cut(s)	191, 439, 968, 1115, 1175
VspI	ATTAAT	1 cut(s)	879
XapI	RAATTY	5 cut(s)	226, 272, 591, 784, 1200
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1186
XhoI	CTCGAG	1 cut(s)	285
XmaI	CCCGGG	1 cut(s)	1572
XmiI	GTMKAC	2 cut(s)	265, 1099
XmnI	GAANNNNTTC	1 cut(s)	1264
XspI	CTAG	6 cut(s)	402, 426, 492, 1272, 1398, 1623
ZrmI	AGTACT	1 cut(s)	1522

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.