AT1G18773

acyl-protein thioesterase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
6474802 .. 6475979
1178 bp
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UTR
Exon/CDS
Intron
AT1G18773.2

Sequence Viewer

Length: 198 bp
ATGAGTGCCACGGCCATATCACTTCTCTCGCCGTTCAAGCTCAGTCTCGCCGCTCAGGCTGCTATGGAACATACACCAGTCTTGTGGTCTCATGGCATTGATGAAAAGGCTGTACTATTCGAAGCTGGTCAAGCAGCTCTTCCTTTTCTTCAACAAGCTGGTTTGACTTATGAATTCAAGTTTGGAGTTGTGTCCTGA

Protein Analysis

65

Amino Acids

6.94

Weight (kDa)

5.41

Isoelectric Point (pI)

34.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 53
AciI CCGC 1 cut(s) 51
AcoI YGGCCR 1 cut(s) 12
AcsI RAATTY 1 cut(s) 173
AfaI GTAC 1 cut(s) 114
AgsI TTSAA 3 cut(s) 37, 152, 178
AjuI GAANNNNNNNTTGG 2 cut(s) 165, 197
AluBI AGCT 4 cut(s) 40, 125, 137, 158
AluI AGCT 4 cut(s) 40, 125, 137, 158
Alw26I GTCTC 2 cut(s) 50, 93
AoxI GGCC 1 cut(s) 12
ApeKI GCWGC 2 cut(s) 59, 134
ApoI RAATTY 1 cut(s) 173
AsuII TTCGAA 1 cut(s) 120
BbvI GCAGC 2 cut(s) 46, 146
BceAI ACGGC 2 cut(s) 16, 27
BcoDI GTCTC 2 cut(s) 50, 93
BglI GCCNNNNNGGC 1 cut(s) 56
BisI GCNGC 3 cut(s) 51, 60, 135
BlsI GCNGC 3 cut(s) 52, 61, 136
Bpu10I CCTNAGC 1 cut(s) 54
Bpu14I TTCGAA 1 cut(s) 120
BsaI GGTCTC 1 cut(s) 93
BsaJI CCNNGG 1 cut(s) 9
Bse1I ACTGG 1 cut(s) 77
BseDI CCNNGG 1 cut(s) 9
BseMII CTCAG 2 cut(s) 55, 68
BseNI ACTGG 1 cut(s) 77
BseXI GCAGC 2 cut(s) 46, 146
BshFI GGCC 1 cut(s) 14
BsmAI GTCTC 2 cut(s) 50, 93
BsnI GGCC 1 cut(s) 14
Bso31I GGTCTC 1 cut(s) 93
Bsp119I TTCGAA 1 cut(s) 120
BspACI CCGC 1 cut(s) 51
BspANI GGCC 1 cut(s) 14
BspCNI CTCAG 2 cut(s) 54, 67
BspQI GCTCTTC 1 cut(s) 144
BspT104I TTCGAA 1 cut(s) 120
BspTNI GGTCTC 1 cut(s) 93
BsrBI CCGCTC 1 cut(s) 53
BsrI ACTGG 1 cut(s) 77
BssECI CCNNGG 1 cut(s) 9
Bst6I CTCTTC 1 cut(s) 144
BstBI TTCGAA 1 cut(s) 120
BstDEI CTNAG 2 cut(s) 41, 54
BstDSI CCRYGG 1 cut(s) 9
BstMAI GTCTC 2 cut(s) 50, 93
BstMWI GCNNNNNNNGC 4 cut(s) 37, 56, 59, 131
BstV1I GCAGC 2 cut(s) 46, 146
BstXI CCANNNNNNTGG 1 cut(s) 84
BsuRI GGCC 1 cut(s) 14
BtgI CCRYGG 1 cut(s) 9
Csp6I GTAC 1 cut(s) 113
CviAII CATG 1 cut(s) 92
CviJI RGCY 7 cut(s) 14, 40, 59, 110, 125, 137, 158
CviKI_1 RGCY 7 cut(s) 14, 40, 59, 110, 125, 137, 158
CviQI GTAC 1 cut(s) 113
DdeI CTNAG 2 cut(s) 41, 54
EaeI YGGCCR 1 cut(s) 12
Eam1104I CTCTTC 1 cut(s) 144
EarI CTCTTC 1 cut(s) 144
Eco31I GGTCTC 1 cut(s) 93
EcoRI GAATTC 1 cut(s) 173
FaeI CATG 1 cut(s) 95
FaiI YATR 5 cut(s) 17, 65, 72, 93, 171
FalI AAGNNNNNCTT 2 cut(s) 123, 155
FatI CATG 1 cut(s) 91
Fnu4HI GCNGC 3 cut(s) 51, 60, 135
Fsp4HI GCNGC 3 cut(s) 51, 60, 135
GluI GCNGC 3 cut(s) 51, 60, 135
HaeIII GGCC 1 cut(s) 14
Hin1II CATG 1 cut(s) 95
Hpy188III TCNNGA 1 cut(s) 195
HpyF10VI GCNNNNNNNGC 4 cut(s) 37, 56, 59, 131
HpyF3I CTNAG 2 cut(s) 41, 54
Hsp92II CATG 1 cut(s) 95
LguI GCTCTTC 1 cut(s) 144
LpnPI CCDG 4 cut(s) 41, 90, 111, 144
Lsp1109I GCAGC 2 cut(s) 46, 146
MbiI CCGCTC 1 cut(s) 53
MboII GAAGA 2 cut(s) 131, 140
MluCI AATT 1 cut(s) 173
MwoI GCNNNNNNNGC 4 cut(s) 37, 56, 59, 131
NlaIII CATG 1 cut(s) 95
NspV TTCGAA 1 cut(s) 120
PciSI GCTCTTC 1 cut(s) 144
PkrI GCNGC 3 cut(s) 52, 61, 136
RsaI GTAC 1 cut(s) 114
RsaNI GTAC 1 cut(s) 113
SapI GCTCTTC 1 cut(s) 144
SatI GCNGC 3 cut(s) 51, 60, 135
SetI ASST 4 cut(s) 42, 127, 139, 160
SfuI TTCGAA 1 cut(s) 120
Sse9I AATT 1 cut(s) 173
SsiI CCGC 1 cut(s) 51
TaqI TCGA 1 cut(s) 120
TasI AATT 1 cut(s) 173
TatI WGTACW 1 cut(s) 112
TauI GCSGC 1 cut(s) 53
TseI GCWGC 2 cut(s) 59, 134
TspDTI ATGAA 2 cut(s) 117, 186
XapI RAATTY 1 cut(s) 173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.