Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006783

Physical Location & Seq

Genomic Coordinates Reverse (-)

7651646 .. 7652288

Gene Structure 643 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G21770.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 336 bp

ATGGCGACGGGGACGGCGACGGAGAAACCGAAGATCGTGTGGAACGAAGGAAGACATAGATTCGAGACTGATGATCACGAAGCCTTCATAGAGTACAAGATGAAGAATGACGGTAAAGTCATGGATCTGGTTCGAACCTTCGTACCGCCGTCAAAAGCAGGACTTGGTTTAGCTTCGCATCTATGCGTCGCCGCTTTCGAACACGCCTCTGAACACTCTTTCTCCATCATCCCCACTTGCTCCTACGTTTCCGAAACGTTTCTTCATCGAAACCCAACGTGGCAGCGTCTGGTTCACTCAGAGGATGATTCCAAGAACCTCAAGTCTAGCATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004402 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006996 GO:0008080 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016740 GO:0016746 GO:0016747 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0034212 GO:0036211 GO:0042579 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0051276 GO:0061733 GO:0071704 GO:0071840 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_CG

Protein Analysis

111

Amino Acids

12.56

Weight (kDa)

6.36

Isoelectric Point (pI)

31.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acetyltransf_CG	PF14542	21 - 97	4.3e-20	GCN5-related N-acetyl-transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0006783)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21770 AT1G77540
fragaria_vesca	FvH4_2g27080
malus_domestica	MD15G1347100.v1.1
prunus_persica	Prupe.1G494800_v2.0.a1
pyrus_communis	pycom15g31140
rosa_chinensis	RchiOBHm_Chr6g0295961
rosa_laevigata	RLG00000011752
rosa_multiflora	Rmu_sc0003139.1_g000011 Rmu_sc0011232.1_g000006 Rmu_sc0016143.1_g000002
rosa_roxburghii	Rroxscaffold_7G00172020
rosa_rugosa	Rorug05G0239300 Rorug06G0218900 Rorug06G0255300 Rorug06G0255400
rosa_samantha	Rh3DG095600 Rh4DG073200 Rh6AG369100 Rh6BG376900 Rh6CG383100 Rh6DG369600
rosa_wichuraiana	Rw2G021900 Rw4G005100 Rw6G029190 Rw6G032190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	116
AciI	CCGC	2 cut(s)	146, 192
AclI	AACGTT	1 cut(s)	257
AclWI	GGATC	1 cut(s)	132
AfaI	GTAC	2 cut(s)	95, 144
AluBI	AGCT	1 cut(s)	173
AluI	AGCT	1 cut(s)	173
Alw26I	GTCTC	1 cut(s)	59
AlwI	GGATC	1 cut(s)	132
AlwNI	CAGNNNCTG	1 cut(s)	289
ApeKI	GCWGC	1 cut(s)	283
Asp700I	GAANNNNTTC	1 cut(s)	258
AsuII	TTCGAA	2 cut(s)	133, 198
BaeI	ACNNNNGTAYC	2 cut(s)	126, 159
BbsI	GAAGAC	1 cut(s)	58
BbvI	GCAGC	1 cut(s)	295
BccI	CCATC	1 cut(s)	233
BceAI	ACGGC	2 cut(s)	30, 133
BclI	TGATCA	1 cut(s)	73
BcoDI	GTCTC	1 cut(s)	59
BfaI	CTAG	1 cut(s)	327
BisI	GCNGC	2 cut(s)	192, 284
BlsI	GCNGC	2 cut(s)	193, 285
BmsI	GCATC	1 cut(s)	187
BpiI	GAAGAC	1 cut(s)	58
Bpu14I	TTCGAA	2 cut(s)	133, 198
BpuEI	CTTGAG	1 cut(s)	305
BsaXI	ACNNNNNCTCC	2 cut(s)	206, 236
BseGI	GGATG	2 cut(s)	228, 310
BseMII	CTCAG	1 cut(s)	312
BseXI	GCAGC	1 cut(s)	295
BslFI	GGGAC	1 cut(s)	25
BsmAI	GTCTC	1 cut(s)	59
BsmFI	GGGAC	1 cut(s)	25
Bsp119I	TTCGAA	2 cut(s)	133, 198
Bsp143I	GATC	3 cut(s)	33, 73, 124
BspACI	CCGC	2 cut(s)	146, 192
BspCNI	CTCAG	1 cut(s)	311
BspPI	GGATC	1 cut(s)	132
BspT104I	TTCGAA	2 cut(s)	133, 198
BssMI	GATC	3 cut(s)	33, 73, 124
Bst4CI	ACNGT	1 cut(s)	113
BstBI	TTCGAA	2 cut(s)	133, 198
BstDEI	CTNAG	1 cut(s)	298
BstF5I	GGATG	2 cut(s)	228, 310
BstKTI	GATC	3 cut(s)	36, 76, 127
BstMAI	GTCTC	1 cut(s)	59
BstMBI	GATC	3 cut(s)	33, 73, 124
BstV1I	GCAGC	1 cut(s)	295
BstV2I	GAAGAC	1 cut(s)	58
BstX2I	RGATCY	1 cut(s)	124
BstYI	RGATCY	1 cut(s)	124
BtsCI	GGATG	2 cut(s)	228, 310
CaiI	CAGNNNCTG	1 cut(s)	289
CseI	GACGC	2 cut(s)	175, 275
Csp6I	GTAC	2 cut(s)	94, 143
CviAII	CATG	1 cut(s)	121
CviJI	RGCY	2 cut(s)	83, 173
CviKI_1	RGCY	2 cut(s)	83, 173
CviQI	GTAC	2 cut(s)	94, 143
DdeI	CTNAG	1 cut(s)	298
DpnI	GATC	3 cut(s)	35, 75, 126
DpnII	GATC	3 cut(s)	33, 73, 124
DrdI	GACNNNNNNGTC	1 cut(s)	116
DseDI	GACNNNNNNGTC	1 cut(s)	116
FaeI	CATG	1 cut(s)	124
FaiI	YATR	4 cut(s)	57, 89, 122, 184
FalI	AAGNNNNNCTT	2 cut(s)	147, 179
FaqI	GGGAC	1 cut(s)	25
FatI	CATG	1 cut(s)	120
FbaI	TGATCA	1 cut(s)	73
Fnu4HI	GCNGC	2 cut(s)	192, 284
FokI	GGATG	2 cut(s)	215, 317
Fsp4HI	GCNGC	2 cut(s)	192, 284
FspBI	CTAG	1 cut(s)	327
GluI	GCNGC	2 cut(s)	192, 284
HgaI	GACGC	2 cut(s)	175, 275
Hin1II	CATG	1 cut(s)	124
HinfI	GANTC	2 cut(s)	60, 308
Hpy166II	GTNNAC	1 cut(s)	295
Hpy188I	TCNGA	4 cut(s)	211, 253, 301, 335
Hpy188III	TCNNGA	2 cut(s)	64, 77
Hpy8I	GTNNAC	1 cut(s)	295
Hpy99I	CGWCG	3 cut(s)	10, 22, 191
HpyAV	CCTTC	3 cut(s)	41, 94, 148
HpyCH4III	ACNGT	1 cut(s)	113
HpyCH4IV	ACGT	3 cut(s)	246, 257, 278
HpyF3I	CTNAG	1 cut(s)	298
HpySE526I	ACGT	3 cut(s)	246, 257, 278
Hsp92II	CATG	1 cut(s)	124
Ksp22I	TGATCA	1 cut(s)	73
Kzo9I	GATC	3 cut(s)	33, 73, 124
LmnI	GCTCC	1 cut(s)	245
LpnPI	CCDG	3 cut(s)	113, 144, 275
Lsp1109I	GCAGC	1 cut(s)	295
LweI	GCATC	1 cut(s)	187
MaeI	CTAG	1 cut(s)	327
MaeII	ACGT	3 cut(s)	246, 257, 278
MalI	GATC	3 cut(s)	35, 75, 126
MboI	GATC	3 cut(s)	33, 73, 124
MboII	GAAGA	4 cut(s)	43, 63, 115, 254
MflI	RGATCY	1 cut(s)	124
MnlI	CCTC	3 cut(s)	217, 295, 329
MroXI	GAANNNNTTC	1 cut(s)	258
NdeII	GATC	3 cut(s)	33, 73, 124
NlaIII	CATG	1 cut(s)	124
NspV	TTCGAA	2 cut(s)	133, 198
PcsI	WCGNNNNNNNCGW	4 cut(s)	14, 26, 42, 195
PdmI	GAANNNNTTC	1 cut(s)	258
PfeI	GAWTC	2 cut(s)	60, 308
PkrI	GCNGC	2 cut(s)	193, 285
Psp1406I	AACGTT	1 cut(s)	257
PstNI	CAGNNNCTG	1 cut(s)	289
PsuI	RGATCY	1 cut(s)	124
RsaI	GTAC	2 cut(s)	95, 144
RsaNI	GTAC	2 cut(s)	94, 143
SatI	GCNGC	2 cut(s)	192, 284
Sau3AI	GATC	3 cut(s)	33, 73, 124
SetI	ASST	6 cut(s)	140, 175, 249, 260, 281, 321
SfaNI	GCATC	1 cut(s)	187
SfuI	TTCGAA	2 cut(s)	133, 198
SmlI	CTYRAG	1 cut(s)	320
SmoI	CTYRAG	1 cut(s)	320
SsiI	CCGC	2 cut(s)	146, 192
SspMI	CTAG	1 cut(s)	327
TaaI	ACNGT	1 cut(s)	113
TaiI	ACGT	3 cut(s)	249, 260, 281
TaqI	TCGA	4 cut(s)	63, 133, 198, 268
TatI	WGTACW	1 cut(s)	93
TauI	GCSGC	1 cut(s)	194
TfiI	GAWTC	2 cut(s)	60, 308
TseI	GCWGC	1 cut(s)	283
TspDTI	ATGAA	3 cut(s)	76, 116, 254
TspGWI	ACGGA	1 cut(s)	35
XmnI	GAANNNNTTC	1 cut(s)	258
XspI	CTAG	1 cut(s)	327

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.