Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006783

Physical Location & Seq

Genomic Coordinates Reverse (-)

29137626 .. 29138282

Gene Structure 657 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G77540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 345 bp

ATGACGAACACGGCGGCGACAACGGAGGCGAAGATGGCGACAGAGCCACCAAAGATAGTGTGGAACGAAGGCAAAAGGCGATTCGAGACGGAGGATCACGAAGCTTTCATAGAATACAAGATGAGAAACAACGGTAAAGTGATGGATCTGGTTCATACTTACGTTCCTTCATTCAAACGAGGATTAGGTTTAGCTTCTCATCTCTGCGTCGCCGCTTTCGAACACGCCTCTTCTCACTCCATCTCCATCATCCCTTCTTGCTCCTACGTTTCGGATACGTTTCTTCCTCGAAACCCATCATGGAAGCCTCTGATTCATTCAGAGGTATTCAAGTCTAGCATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004402 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006996 GO:0008080 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016740 GO:0016746 GO:0016747 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0034212 GO:0036211 GO:0042579 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0051276 GO:0061733 GO:0071704 GO:0071840 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_CG

Protein Analysis

114

Amino Acids

12.85

Weight (kDa)

7.85

Isoelectric Point (pI)

46.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acetyltransf_CG	PF14542	28 - 102	2e-19	GCN5-related N-acetyl-transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0006783)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21770 AT1G77540
fragaria_vesca	FvH4_2g27080
malus_domestica	MD15G1347100.v1.1
prunus_persica	Prupe.1G494800_v2.0.a1
pyrus_communis	pycom15g31140
rosa_chinensis	RchiOBHm_Chr6g0295961
rosa_laevigata	RLG00000011752
rosa_multiflora	Rmu_sc0003139.1_g000011 Rmu_sc0011232.1_g000006 Rmu_sc0016143.1_g000002
rosa_roxburghii	Rroxscaffold_7G00172020
rosa_rugosa	Rorug05G0239300 Rorug06G0218900 Rorug06G0255300 Rorug06G0255400
rosa_samantha	Rh3DG095600 Rh4DG073200 Rh6AG369100 Rh6BG376900 Rh6CG383100 Rh6DG369600
rosa_wichuraiana	Rw2G021900 Rw4G005100 Rw6G029190 Rw6G032190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	2 cut(s)	14, 213
AclWI	GGATC	2 cut(s)	102, 153
AgsI	TTSAA	2 cut(s)	175, 331
AluBI	AGCT	2 cut(s)	104, 194
AluI	AGCT	2 cut(s)	104, 194
Alw26I	GTCTC	1 cut(s)	80
AlwI	GGATC	2 cut(s)	102, 153
AsuII	TTCGAA	1 cut(s)	219
BccI	CCATC	5 cut(s)	28, 136, 248, 254, 304
BceAI	ACGGC	1 cut(s)	27
BciVI	GTATCC	1 cut(s)	268
BcoDI	GTCTC	1 cut(s)	80
BfaI	CTAG	1 cut(s)	336
BfuI	GTATCC	1 cut(s)	268
BisI	GCNGC	2 cut(s)	15, 213
BlsI	GCNGC	2 cut(s)	16, 214
Bpu14I	TTCGAA	1 cut(s)	219
BsaXI	ACNNNNNCTCC	2 cut(s)	227, 257
BseGI	GGATG	1 cut(s)	249
BsmAI	GTCTC	1 cut(s)	80
BsmBI	CGTCTC	1 cut(s)	80
Bsp119I	TTCGAA	1 cut(s)	219
Bsp143I	GATC	2 cut(s)	94, 145
BspACI	CCGC	2 cut(s)	14, 213
BspPI	GGATC	2 cut(s)	102, 153
BspT104I	TTCGAA	1 cut(s)	219
BssMI	GATC	2 cut(s)	94, 145
Bst4CI	ACNGT	1 cut(s)	134
Bst6I	CTCTTC	1 cut(s)	235
BstBI	TTCGAA	1 cut(s)	219
BstF5I	GGATG	1 cut(s)	249
BstKTI	GATC	2 cut(s)	97, 148
BstMAI	GTCTC	1 cut(s)	80
BstMBI	GATC	2 cut(s)	94, 145
BstMWI	GCNNNNNNNGC	1 cut(s)	35
BstX2I	RGATCY	1 cut(s)	145
BstYI	RGATCY	1 cut(s)	145
BsuI	GTATCC	1 cut(s)	268
BtsCI	GGATG	1 cut(s)	249
CseI	GACGC	1 cut(s)	196
CviAII	CATG	1 cut(s)	300
CviJI	RGCY	4 cut(s)	46, 104, 194, 307
CviKI_1	RGCY	4 cut(s)	46, 104, 194, 307
DpnI	GATC	2 cut(s)	96, 147
DpnII	GATC	2 cut(s)	94, 145
Eam1104I	CTCTTC	1 cut(s)	235
EarI	CTCTTC	1 cut(s)	235
Esp3I	CGTCTC	1 cut(s)	80
FaeI	CATG	1 cut(s)	303
FaiI	YATR	3 cut(s)	110, 156, 301
FatI	CATG	1 cut(s)	299
Fnu4HI	GCNGC	2 cut(s)	15, 213
FokI	GGATG	1 cut(s)	236
Fsp4HI	GCNGC	2 cut(s)	15, 213
FspBI	CTAG	1 cut(s)	336
GluI	GCNGC	2 cut(s)	15, 213
HgaI	GACGC	1 cut(s)	196
Hin1II	CATG	1 cut(s)	303
HindIII	AAGCTT	1 cut(s)	102
HinfI	GANTC	2 cut(s)	81, 313
Hpy188I	TCNGA	3 cut(s)	274, 312, 322
Hpy188III	TCNNGA	2 cut(s)	85, 98
Hpy99I	CGWCG	1 cut(s)	212
HpyAV	CCTTC	3 cut(s)	62, 177, 264
HpyCH4III	ACNGT	1 cut(s)	134
HpyCH4IV	ACGT	3 cut(s)	162, 267, 278
HpyF10VI	GCNNNNNNNGC	1 cut(s)	35
HpySE526I	ACGT	3 cut(s)	162, 267, 278
Hsp92II	CATG	1 cut(s)	303
Kzo9I	GATC	2 cut(s)	94, 145
LmnI	GCTCC	1 cut(s)	266
LpnPI	CCDG	1 cut(s)	134
MaeI	CTAG	1 cut(s)	336
MaeII	ACGT	3 cut(s)	162, 267, 278
MalI	GATC	2 cut(s)	96, 147
MboI	GATC	2 cut(s)	94, 145
MboII	GAAGA	3 cut(s)	43, 222, 275
MflI	RGATCY	1 cut(s)	145
MnlI	CCTC	7 cut(s)	19, 85, 173, 238, 297, 316, 318
MwoI	GCNNNNNNNGC	1 cut(s)	35
NdeII	GATC	2 cut(s)	94, 145
NlaIII	CATG	1 cut(s)	303
NspV	TTCGAA	1 cut(s)	219
PcsI	WCGNNNNNNNCGW	1 cut(s)	216
PfeI	GAWTC	2 cut(s)	81, 313
PkrI	GCNGC	2 cut(s)	16, 214
PsuI	RGATCY	1 cut(s)	145
SatI	GCNGC	2 cut(s)	15, 213
Sau3AI	GATC	2 cut(s)	94, 145
SetI	ASST	7 cut(s)	106, 165, 190, 196, 270, 281, 327
SfuI	TTCGAA	1 cut(s)	219
SsiI	CCGC	2 cut(s)	14, 213
SspMI	CTAG	1 cut(s)	336
TaaI	ACNGT	1 cut(s)	134
TaiI	ACGT	3 cut(s)	165, 270, 281
TaqI	TCGA	3 cut(s)	84, 219, 289
TauI	GCSGC	2 cut(s)	17, 215
TfiI	GAWTC	2 cut(s)	81, 313
TspDTI	ATGAA	4 cut(s)	97, 143, 159, 305
TspGWI	ACGGA	2 cut(s)	38, 104
XcmI	CCANNNNNNNNNTGG	1 cut(s)	57
XspI	CTAG	1 cut(s)	336

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.