Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0006783

Physical Location & Seq

Genomic Coordinates Reverse (-)

41097339 .. 41098535

Gene Structure 1197 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G494800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 339 bp

ATGGCAACACCAGCAGCTTCGTCCGCGGCAGAAGCTCCAAAGATTGTGTGGAACGAAGCCAAGCGAAGGTTCGAATCGGAGGACCAGAAGGCGTACATAGAGTATGTGCTCAGGGAAAATGGAAAAGTGATGGACTTGGTGCACACCTTCGTCCCATCTTCCAAGAGAGGCTTGGGCTTGGCTTCCCATCTCTGCGTCGCGGCCTTCAACCACGCCAAGTCCAATTCCATCTCTGTCATCCCCACCTGCTCTTACGTCTCTGACACTTTTCTCCCGCGGAACCCTTCCTGGAATACTGTTTTGTACTCAGGACCAGGAGAGATGAAGTCTAGTATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004402 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006996 GO:0008080 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016740 GO:0016746 GO:0016747 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0034212 GO:0036211 GO:0042579 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0051276 GO:0061733 GO:0071704 GO:0071840 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_CG

Protein Analysis

113

Amino Acids

12.26

Weight (kDa)

8.62

Isoelectric Point (pI)

43.3

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006783)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21770 AT1G77540
fragaria_vesca	FvH4_2g27080
malus_domestica	MD15G1347100.v1.1
prunus_persica	Prupe.1G494800_v2.0.a1
pyrus_communis	pycom15g31140
rosa_chinensis	RchiOBHm_Chr6g0295961
rosa_laevigata	RLG00000011752
rosa_multiflora	Rmu_sc0003139.1_g000011 Rmu_sc0011232.1_g000006 Rmu_sc0016143.1_g000002
rosa_roxburghii	Rroxscaffold_7G00172020
rosa_rugosa	Rorug05G0239300 Rorug06G0218900 Rorug06G0255300 Rorug06G0255400
rosa_samantha	Rh3DG095600 Rh4DG073200 Rh6AG369100 Rh6BG376900 Rh6CG383100 Rh6DG369600
rosa_wichuraiana	Rw2G021900 Rw4G005100 Rw6G029190 Rw6G032190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	254
Acc36I	ACCTGC	1 cut(s)	254
AccII	CGCG	3 cut(s)	26, 200, 277
AciI	CCGC	5 cut(s)	24, 26, 200, 275, 277
AfaI	GTAC	2 cut(s)	95, 305
AfiI	CCNNNNNNNGG	1 cut(s)	66
AgsI	TTSAA	1 cut(s)	208
AjnI	CCWGG	2 cut(s)	287, 313
AjuI	GAANNNNNNNTTGG	2 cut(s)	53, 85
AluBI	AGCT	2 cut(s)	17, 35
AluI	AGCT	2 cut(s)	17, 35
Alw21I	GWGCWC	2 cut(s)	111, 144
Alw26I	GTCTC	1 cut(s)	262
Alw44I	GTGCAC	1 cut(s)	140
AoxI	GGCC	1 cut(s)	201
ApaLI	GTGCAC	1 cut(s)	140
ApeKI	GCWGC	1 cut(s)	14
AspS9I	GGNCC	2 cut(s)	82, 311
AsuII	TTCGAA	1 cut(s)	72
AvaII	GGWCC	2 cut(s)	82, 311
BaeGI	GKGCMC	1 cut(s)	144
Bbv12I	GWGCWC	2 cut(s)	111, 144
BbvI	GCAGC	1 cut(s)	26
BccI	CCATC	4 cut(s)	124, 163, 195, 236
BciT130I	CCWGG	2 cut(s)	289, 315
BcoDI	GTCTC	1 cut(s)	262
BfaI	CTAG	1 cut(s)	330
BfuAI	ACCTGC	1 cut(s)	254
BisI	GCNGC	3 cut(s)	15, 27, 201
BlsI	GCNGC	3 cut(s)	16, 28, 202
Bme1390I	CCNGG	2 cut(s)	289, 315
Bme18I	GGWCC	2 cut(s)	82, 311
BmgT120I	GGNCC	2 cut(s)	82, 311
BmiI	GGNNCC	1 cut(s)	281
BmrFI	CCNGG	2 cut(s)	289, 315
Bpu10I	CCTNAGC	1 cut(s)	110
Bpu14I	TTCGAA	1 cut(s)	72
BsaJI	CCNNGG	2 cut(s)	24, 275
Bsc4I	CCNNNNNNNGG	1 cut(s)	66
BseBI	CCWGG	2 cut(s)	289, 315
BseDI	CCNNGG	2 cut(s)	24, 275
BseGI	GGATG	1 cut(s)	237
BseLI	CCNNNNNNNGG	1 cut(s)	66
BseMII	CTCAG	2 cut(s)	124, 321
BseSI	GKGCMC	1 cut(s)	144
BseXI	GCAGC	1 cut(s)	26
Bsh1236I	CGCG	3 cut(s)	26, 200, 277
BshFI	GGCC	1 cut(s)	203
BsiHKAI	GWGCWC	2 cut(s)	111, 144
BslFI	GGGAC	1 cut(s)	137
BslI	CCNNNNNNNGG	1 cut(s)	66
BsmAI	GTCTC	1 cut(s)	262
BsmBI	CGTCTC	1 cut(s)	262
BsmFI	GGGAC	1 cut(s)	137
BsnI	GGCC	1 cut(s)	203
Bsp119I	TTCGAA	1 cut(s)	72
Bsp1286I	GDGCHC	2 cut(s)	111, 144
BspACI	CCGC	5 cut(s)	24, 26, 200, 275, 277
BspANI	GGCC	1 cut(s)	203
BspCNI	CTCAG	2 cut(s)	123, 320
BspFNI	CGCG	3 cut(s)	26, 200, 277
BspLI	GGNNCC	1 cut(s)	281
BspMI	ACCTGC	1 cut(s)	254
BspT104I	TTCGAA	1 cut(s)	72
BssECI	CCNNGG	2 cut(s)	24, 275
Bst2UI	CCWGG	2 cut(s)	289, 315
Bst4CI	ACNGT	1 cut(s)	298
BstBI	TTCGAA	1 cut(s)	72
BstDEI	CTNAG	2 cut(s)	110, 307
BstDSI	CCRYGG	2 cut(s)	24, 275
BstF5I	GGATG	1 cut(s)	237
BstFNI	CGCG	3 cut(s)	26, 200, 277
BstMAI	GTCTC	1 cut(s)	262
BstMWI	GCNNNNNNNGC	3 cut(s)	11, 23, 32
BstNI	CCWGG	2 cut(s)	289, 315
BstSCI	CCNGG	2 cut(s)	287, 313
BstSLI	GKGCMC	1 cut(s)	144
BstUI	CGCG	3 cut(s)	26, 200, 277
BstV1I	GCAGC	1 cut(s)	26
BsuRI	GGCC	1 cut(s)	203
BtgI	CCRYGG	2 cut(s)	24, 275
BtsCI	GGATG	1 cut(s)	237
BveI	ACCTGC	1 cut(s)	254
Cfr13I	GGNCC	2 cut(s)	82, 311
Cfr42I	CCGCGG	2 cut(s)	27, 278
CseI	GACGC	1 cut(s)	184
Csp6I	GTAC	2 cut(s)	94, 304
CviJI	RGCY	7 cut(s)	17, 35, 59, 171, 177, 182, 203
CviKI_1	RGCY	7 cut(s)	17, 35, 59, 171, 177, 182, 203
CviQI	GTAC	2 cut(s)	94, 304
DdeI	CTNAG	2 cut(s)	110, 307
Eco47I	GGWCC	2 cut(s)	82, 311
EcoRII	CCWGG	2 cut(s)	287, 313
Esp3I	CGTCTC	1 cut(s)	262
FaiI	YATR	4 cut(s)	98, 105, 335, 337
FalI	AAGNNNNNCTT	2 cut(s)	155, 187
FaqI	GGGAC	1 cut(s)	137
FauI	CCCGC	1 cut(s)	282
Fnu4HI	GCNGC	3 cut(s)	15, 27, 201
FokI	GGATG	1 cut(s)	224
Fsp4HI	GCNGC	3 cut(s)	15, 27, 201
FspBI	CTAG	1 cut(s)	330
GluI	GCNGC	3 cut(s)	15, 27, 201
HaeIII	GGCC	1 cut(s)	203
HgaI	GACGC	1 cut(s)	184
HinfI	GANTC	1 cut(s)	74
Hpy166II	GTNNAC	1 cut(s)	142
Hpy188I	TCNGA	2 cut(s)	79, 262
Hpy188III	TCNNGA	1 cut(s)	309
Hpy8I	GTNNAC	1 cut(s)	142
Hpy99I	CGWCG	1 cut(s)	200
HpyAV	CCTTC	5 cut(s)	60, 82, 157, 214, 294
HpyCH4III	ACNGT	1 cut(s)	298
HpyCH4IV	ACGT	1 cut(s)	255
HpyCH4V	TGCA	1 cut(s)	142
HpyF10VI	GCNNNNNNNGC	3 cut(s)	11, 23, 32
HpyF3I	CTNAG	2 cut(s)	110, 307
HpySE526I	ACGT	1 cut(s)	255
KspI	CCGCGG	2 cut(s)	27, 278
LmnI	GCTCC	1 cut(s)	40
LpnPI	CCDG	9 cut(s)	24, 97, 98, 259, 274, 294, 300, 301, 327
Lsp1109I	GCAGC	1 cut(s)	26
MaeI	CTAG	1 cut(s)	330
MaeII	ACGT	1 cut(s)	255
MboII	GAAGA	1 cut(s)	150
MhlI	GDGCHC	2 cut(s)	111, 144
MluCI	AATT	1 cut(s)	223
MnlI	CCTC	2 cut(s)	73, 161
MspA1I	CMGCKG	2 cut(s)	26, 277
MspR9I	CCNGG	2 cut(s)	289, 315
MvaI	CCWGG	2 cut(s)	289, 315
MvnI	CGCG	3 cut(s)	26, 200, 277
MwoI	GCNNNNNNNGC	3 cut(s)	11, 23, 32
NlaIV	GGNNCC	1 cut(s)	281
NspV	TTCGAA	1 cut(s)	72
PaqCI	CACCTGC	1 cut(s)	254
PfeI	GAWTC	1 cut(s)	74
PfoI	TCCNGGA	1 cut(s)	287
PkrI	GCNGC	3 cut(s)	16, 28, 202
Psp6I	CCWGG	2 cut(s)	287, 313
PspGI	CCWGG	2 cut(s)	287, 313
PspN4I	GGNNCC	1 cut(s)	281
PspPI	GGNCC	2 cut(s)	82, 311
RsaI	GTAC	2 cut(s)	95, 305
RsaNI	GTAC	2 cut(s)	94, 304
SacII	CCGCGG	2 cut(s)	27, 278
SatI	GCNGC	3 cut(s)	15, 27, 201
Sau96I	GGNCC	2 cut(s)	82, 311
ScrFI	CCNGG	2 cut(s)	289, 315
SduI	GDGCHC	2 cut(s)	111, 144
SetI	ASST	6 cut(s)	19, 37, 71, 149, 248, 258
Sfr303I	CCGCGG	2 cut(s)	27, 278
SfuI	TTCGAA	1 cut(s)	72
SgrBI	CCGCGG	2 cut(s)	27, 278
SinI	GGWCC	2 cut(s)	82, 311
Sse9I	AATT	1 cut(s)	223
SsiI	CCGC	5 cut(s)	24, 26, 200, 275, 277
SspMI	CTAG	1 cut(s)	330
StyD4I	CCNGG	2 cut(s)	287, 313
TaaI	ACNGT	1 cut(s)	298
TaiI	ACGT	1 cut(s)	258
TaqI	TCGA	1 cut(s)	72
TasI	AATT	1 cut(s)	223
TatI	WGTACW	1 cut(s)	303
TauI	GCSGC	2 cut(s)	29, 203
TfiI	GAWTC	1 cut(s)	74
TseI	GCWGC	1 cut(s)	14
TspDTI	ATGAA	1 cut(s)	338
VneI	GTGCAC	1 cut(s)	140
VpaK11BI	GGWCC	2 cut(s)	82, 311
XcmI	CCANNNNNNNNNTGG	2 cut(s)	45, 169
XspI	CTAG	1 cut(s)	330

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.