Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007607

Physical Location & Seq

Genomic Coordinates Reverse (-)

7750994 .. 7753519

Gene Structure 2526 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G22015.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1197 bp

ATGAAGCACAACAACAAAGTCTCCAAGAGACTTACTATGACATGGGTTCCTCTTCTTTGCATTTCTTGCTTTTTCCTCGGAGCAATCTTCACCTCCAAATTACGATCAGCTTCGTCGGATTCCGGTAGCCAGCTCATTTTACAGCACCGGCGTGATCAGGAGCTTAAGATTGTTACCCAAGATTATGCTCATGAGAAAAAGAAATCACAAGACAATGATGTAATGGAAGAGGTTTTAAAAACTCATAAAGCAATCGAATCATTGGATAAGTCAGTTTCTATGCTTCAGAAGCAGCTCTCTGCTACACATAGCCCTCAACAGATTGTGAATGTCTCAGCAACCAATTCTTCAACAGAAGGAAACCAAAAGAACAAAGTTTTTATGGTGATTGGTATCAATACTGCATTTAGCAGTCGAAAACGTCGCGATTCGCTTAGAGAGACTTGGATGCCTCAAGGGGAAAAGCTTGAGAAATTGGAAAAAGAGAAGGGAATTGTCGTCAAATTTATGATTGGACACAGTTCAACGCCAAACAGTATGTTGGATAAGGAGATTGATTCAGAAGATGCTCAATACAACGATTTCTTTAGGCTGGATCATGTCGAAGGATATTACAATCTATCTGCAAAAACCAAAAGCTTCTTCTCTAGTGCAGTTGCAAAGTGGGATGCTGAGTTTTATGTCAAGATTGATGATGATGTTCACGTCAATCTTGGCACGCTTGCTTCCACATTAGCAAGTCACCGTTCTAAGCCAAGGGTCTACATTGGATGTATGAAATCCGGTCCTGTCCTTACCAAAAAGACGGCCAAGTACCGTGAACCCGAGTTTTGGAAATTTGGAGAAGAAGGTAACAAATATTTCCGACATGCTACGGGACAGATTTATGCCATATCAAAGGATCTTGCCACATACATATCTAACAACCAGCCAATTTTGCATAAGTATGCAAATGAAGATGTGACACTCGGGTCATGGTTTATCGGTCTTGAGGTTGAGCAAATCGATGATCGTAATTTCTGTTGTGGTACTCCTCCAGACTGTGAAATGAGGGCAGAGGCTGGCGAAATGTGTGTGGCTACATTTGACTGGAAGTGTAGTGGAGTATGCAGATCAGTCGATAGAATGTGGATGGTTCATGTGATGTGTGGTGAAGGTAGTAAAGCTGTGTGGGACGCAAATTTAAAACTCTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0008378 GO:0012505 GO:0016740 GO:0016757 GO:0016758 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048531

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4094 Galactosyl_T

Protein Analysis

398

Amino Acids

45.2

Weight (kDa)

8.38

Isoelectric Point (pI)

39.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF4094	PF13334	13 - 104	3.2e-26	Domain of unknown function (DUF4094)
Galactosyl_T	PF01762	140 - 336	9.9e-47	Galactosyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007607)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22015 AT1G77810 AT1G77810
fragaria_vesca	FvH4_5g38810
malus_domestica	MD00G1104200.v1.1 MD15G1358800.v1.1
prunus_persica	Prupe.1G506600_v2.0.a1 Prupe.1G506600_v2.0.a1 Prupe.1G506600_v2.0.a1 Prupe.1G506600_v2.0.a1
pyrus_communis	pycom08g14830 pycom15g32130
rosa_chinensis	RchiOBHm_Chr7g0240811
rosa_laevigata	RLG00000000623
rosa_multiflora	Rmu_sc0004821.1_g000013 Rmu_sc0010888.1_g000005
rosa_roxburghii	Rroxscaffold_3G00219610
rosa_rugosa	Rorug07G0339000 Rorug07G0339100 Rorug07G0339200 Rorug07G0339300
rosa_samantha	Rh7AG493400 Rh7BG465400
rosa_wichuraiana	Rw7G041750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	970
AccI	GTMKAC	1 cut(s)	762
AccII	CGCG	1 cut(s)	426
AclWI	GGATC	2 cut(s)	603, 909
AcoI	YGGCCR	1 cut(s)	807
AcsI	RAATTY	3 cut(s)	503, 836, 1180
AcuI	CTGAAG	1 cut(s)	269
AfaI	GTAC	2 cut(s)	815, 1030
AfiI	CCNNNNNNNGG	1 cut(s)	831
AflII	CTTAAG	1 cut(s)	164
AgsI	TTSAA	2 cut(s)	351, 525
AjiI	CACGTC	1 cut(s)	706
AjuI	GAANNNNNNNTTGG	2 cut(s)	626, 658
AleI	CACNNNNGTG	1 cut(s)	150
AluBI	AGCT	7 cut(s)	110, 133, 163, 295, 466, 639, 1166
AluI	AGCT	7 cut(s)	110, 133, 163, 295, 466, 639, 1166
Alw26I	GTCTC	4 cut(s)	22, 25, 337, 434
AlwI	GGATC	2 cut(s)	603, 909
AlwNI	CAGNNNCTG	1 cut(s)	1061
Ama87I	CYCGRG	2 cut(s)	824, 968
AoxI	GGCC	1 cut(s)	807
ApeKI	GCWGC	1 cut(s)	292
ApoI	RAATTY	3 cut(s)	503, 836, 1180
AspS9I	GGNCC	1 cut(s)	785
AsuHPI	GGTGA	4 cut(s)	82, 397, 734, 1163
AvaI	CYCGRG	2 cut(s)	824, 968
AvaII	GGWCC	1 cut(s)	785
BbvI	GCAGC	1 cut(s)	304
BccI	CCATC	1 cut(s)	1126
BceAI	ACGGC	1 cut(s)	822
BcgI	CGANNNNNNTGC	2 cut(s)	1099, 1133
BclI	TGATCA	1 cut(s)	154
BcoDI	GTCTC	4 cut(s)	22, 25, 337, 434
BfaI	CTAG	1 cut(s)	648
BfrI	CTTAAG	1 cut(s)	164
BisI	GCNGC	1 cut(s)	293
BlsI	GCNGC	1 cut(s)	294
Bme18I	GGWCC	1 cut(s)	785
BmeT110I	CYCGRG	2 cut(s)	824, 968
BmgBI	CACGTC	1 cut(s)	706
BmgT120I	GGNCC	1 cut(s)	785
BmiI	GGNNCC	1 cut(s)	48
BmsI	GCATC	3 cut(s)	438, 556, 658
BpmI	CTGGAG	1 cut(s)	1020
BpuEI	CTTGAG	3 cut(s)	438, 488, 1010
Bsa29I	ATCGAT	1 cut(s)	1005
BsaBI	GATNNNNATC	1 cut(s)	392
BsaJI	CCNNGG	2 cut(s)	76, 755
BsaWI	WCCGGW	2 cut(s)	122, 782
BsaXI	ACNNNNNCTCC	2 cut(s)	5, 35
Bsc4I	CCNNNNNNNGG	1 cut(s)	831
Bse118I	RCCGGY	1 cut(s)	147
Bse1I	ACTGG	1 cut(s)	1094
Bse8I	GATNNNNATC	1 cut(s)	392
BseCI	ATCGAT	1 cut(s)	1005
BseDI	CCNNGG	2 cut(s)	76, 755
BseGI	GGATG	4 cut(s)	453, 673, 776, 1137
BseJI	GATNNNNATC	1 cut(s)	392
BseLI	CCNNNNNNNGG	1 cut(s)	831
BseMII	CTCAG	2 cut(s)	348, 663
BseNI	ACTGG	1 cut(s)	1094
BseRI	GAGGAG	1 cut(s)	1023
BseXI	GCAGC	1 cut(s)	304
BsgI	GTGCAG	1 cut(s)	672
Bsh1236I	CGCG	1 cut(s)	426
BshFI	GGCC	1 cut(s)	809
BshVI	ATCGAT	1 cut(s)	1005
BsiHKCI	CYCGRG	2 cut(s)	824, 968
BsiSI	CCGG	3 cut(s)	123, 148, 783
BslFI	GGGAC	2 cut(s)	891, 1187
BslI	CCNNNNNNNGG	1 cut(s)	831
BsmAI	GTCTC	4 cut(s)	22, 25, 337, 434
BsmFI	GGGAC	2 cut(s)	891, 1187
BsnI	GGCC	1 cut(s)	809
BsoBI	CYCGRG	2 cut(s)	824, 968
Bsp143I	GATC	6 cut(s)	104, 154, 595, 901, 1009, 1112
Bsp68I	TCGCGA	1 cut(s)	426
BspANI	GGCC	1 cut(s)	809
BspCNI	CTCAG	2 cut(s)	347, 664
BspDI	ATCGAT	1 cut(s)	1005
BspFNI	CGCG	1 cut(s)	426
BspHI	TCATGA	1 cut(s)	190
BspLI	GGNNCC	1 cut(s)	48
BspPI	GGATC	2 cut(s)	603, 909
BspTI	CTTAAG	1 cut(s)	164
BsrFI	RCCGGY	1 cut(s)	147
BsrI	ACTGG	1 cut(s)	1094
BssAI	RCCGGY	1 cut(s)	147
BssECI	CCNNGG	2 cut(s)	76, 755
BssMI	GATC	6 cut(s)	104, 154, 595, 901, 1009, 1112
BssT1I	CCWWGG	1 cut(s)	755
Bst4CI	ACNGT	5 cut(s)	521, 536, 746, 818, 1043
Bst6I	CTCTTC	2 cut(s)	57, 222
BstAFI	CTTAAG	1 cut(s)	164
BstAPI	GCANNNNNTGC	1 cut(s)	66
BstC8I	GCNNGC	4 cut(s)	131, 719, 723, 1063
BstDEI	CTNAG	5 cut(s)	334, 434, 672, 750, 1194
BstF5I	GGATG	4 cut(s)	453, 673, 776, 1137
BstFNI	CGCG	1 cut(s)	426
BstKTI	GATC	6 cut(s)	107, 157, 598, 904, 1012, 1115
BstMAI	GTCTC	4 cut(s)	22, 25, 337, 434
BstMBI	GATC	6 cut(s)	104, 154, 595, 901, 1009, 1112
BstMWI	GCNNNNNNNGC	3 cut(s)	66, 289, 937
BstNSI	RCATGY	1 cut(s)	872
BstUI	CGCG	1 cut(s)	426
BstV1I	GCAGC	1 cut(s)	304
BstX2I	RGATCY	1 cut(s)	901
BstYI	RGATCY	1 cut(s)	901
Bsu15I	ATCGAT	1 cut(s)	1005
BsuRI	GGCC	1 cut(s)	809
BsuTUI	ATCGAT	1 cut(s)	1005
BtrI	CACGTC	1 cut(s)	706
BtsCI	GGATG	4 cut(s)	453, 673, 776, 1137
BtuMI	TCGCGA	1 cut(s)	426
Cac8I	GCNNGC	4 cut(s)	131, 719, 723, 1063
CaiI	CAGNNNCTG	1 cut(s)	1061
CciI	TCATGA	1 cut(s)	190
Cfr10I	RCCGGY	1 cut(s)	147
Cfr13I	GGNCC	1 cut(s)	785
ClaI	ATCGAT	1 cut(s)	1005
CseI	GACGC	1 cut(s)	1184
Csp6I	GTAC	2 cut(s)	814, 1029
CviAII	CATG	6 cut(s)	42, 191, 599, 869, 975, 1139
CviQI	GTAC	2 cut(s)	814, 1029
DdeI	CTNAG	5 cut(s)	334, 434, 672, 750, 1194
DpnI	GATC	6 cut(s)	106, 156, 597, 903, 1011, 1114
DpnII	GATC	6 cut(s)	104, 154, 595, 901, 1009, 1112
DraI	TTTAAA	2 cut(s)	237, 1185
DrdI	GACNNNNNNGTC	1 cut(s)	970
DseDI	GACNNNNNNGTC	1 cut(s)	970
EaeI	YGGCCR	1 cut(s)	807
Eam1104I	CTCTTC	2 cut(s)	57, 222
EarI	CTCTTC	2 cut(s)	57, 222
Eco130I	CCWWGG	1 cut(s)	755
Eco47I	GGWCC	1 cut(s)	785
Eco57I	CTGAAG	1 cut(s)	269
Eco88I	CYCGRG	2 cut(s)	824, 968
EcoT14I	CCWWGG	1 cut(s)	755
ErhI	CCWWGG	1 cut(s)	755
FaeI	CATG	6 cut(s)	45, 194, 602, 872, 978, 1142
FaqI	GGGAC	2 cut(s)	891, 1187
FatI	CATG	6 cut(s)	41, 190, 598, 868, 974, 1138
FbaI	TGATCA	1 cut(s)	154
FblI	GTMKAC	1 cut(s)	762
Fnu4HI	GCNGC	1 cut(s)	293
FokI	GGATG	4 cut(s)	460, 680, 783, 1144
Fsp4HI	GCNGC	1 cut(s)	293
FspBI	CTAG	1 cut(s)	648
GluI	GCNGC	1 cut(s)	293
GsuI	CTGGAG	1 cut(s)	1020
HaeIII	GGCC	1 cut(s)	809
HapII	CCGG	3 cut(s)	123, 148, 783
HgaI	GACGC	1 cut(s)	1184
Hin1II	CATG	6 cut(s)	45, 194, 602, 872, 978, 1142
HindIII	AAGCTT	2 cut(s)	464, 637
HinfI	GANTC	4 cut(s)	119, 257, 428, 557
HpaII	CCGG	3 cut(s)	123, 148, 783
HphI	GGTGA	4 cut(s)	82, 397, 734, 1163
Hpy166II	GTNNAC	3 cut(s)	703, 763, 821
Hpy188I	TCNGA	5 cut(s)	80, 118, 288, 562, 866
Hpy188III	TCNNGA	6 cut(s)	158, 191, 425, 685, 989, 1037
Hpy8I	GTNNAC	3 cut(s)	703, 763, 821
Hpy99I	CGWCG	2 cut(s)	118, 426
HpyAV	CCTTC	5 cut(s)	350, 481, 599, 842, 1148
HpyCH4III	ACNGT	5 cut(s)	521, 536, 746, 818, 1043
HpyCH4IV	ACGT	2 cut(s)	421, 705
HpyCH4V	TGCA	8 cut(s)	60, 404, 626, 653, 659, 940, 950, 1110
HpyF10VI	GCNNNNNNNGC	3 cut(s)	66, 289, 937
HpyF3I	CTNAG	5 cut(s)	334, 434, 672, 750, 1194
HpySE526I	ACGT	2 cut(s)	421, 705
Hsp92II	CATG	6 cut(s)	45, 194, 602, 872, 978, 1142
Ksp22I	TGATCA	1 cut(s)	154
Kzo9I	GATC	6 cut(s)	104, 154, 595, 901, 1009, 1112
LmnI	GCTCC	2 cut(s)	80, 160
Lsp1109I	GCAGC	1 cut(s)	304
LweI	GCATC	3 cut(s)	438, 556, 658
MaeI	CTAG	1 cut(s)	648
MaeII	ACGT	2 cut(s)	421, 705
MaeIII	GTNAC	4 cut(s)	172, 740, 851, 961
MalI	GATC	6 cut(s)	106, 156, 597, 903, 1011, 1114
MboI	GATC	6 cut(s)	104, 154, 595, 901, 1009, 1112
MboII	GAAGA	8 cut(s)	44, 79, 239, 339, 575, 634, 857, 968
MflI	RGATCY	1 cut(s)	901
MluCI	AATT	9 cut(s)	98, 343, 473, 492, 503, 836, 933, 1015, 1180
MmeI	TCCRAC	3 cut(s)	96, 522, 889
MseI	TTAA	3 cut(s)	165, 236, 1184
MslI	CAYNNNNRTG	2 cut(s)	150, 945
MspCI	CTTAAG	1 cut(s)	164
MspI	CCGG	3 cut(s)	123, 148, 783
MvnI	CGCG	1 cut(s)	426
MwoI	GCNNNNNNNGC	3 cut(s)	66, 289, 937
NdeII	GATC	6 cut(s)	104, 154, 595, 901, 1009, 1112
NlaIII	CATG	6 cut(s)	45, 194, 602, 872, 978, 1142
NlaIV	GGNNCC	1 cut(s)	48
NmuCI	GTSAC	2 cut(s)	740, 961
NruI	TCGCGA	1 cut(s)	426
NspI	RCATGY	1 cut(s)	872
OliI	CACNNNNGTG	1 cut(s)	150
PagI	TCATGA	1 cut(s)	190
PfeI	GAWTC	4 cut(s)	119, 257, 428, 557
PkrI	GCNGC	1 cut(s)	294
PspN4I	GGNNCC	1 cut(s)	48
PspPI	GGNCC	1 cut(s)	785
PstNI	CAGNNNCTG	1 cut(s)	1061
PsuI	RGATCY	1 cut(s)	901
RruI	TCGCGA	1 cut(s)	426
RsaI	GTAC	2 cut(s)	815, 1030
RsaNI	GTAC	2 cut(s)	814, 1029
RseI	CAYNNNNRTG	2 cut(s)	150, 945
SaqAI	TTAA	3 cut(s)	165, 236, 1184
SatI	GCNGC	1 cut(s)	293
Sau3AI	GATC	6 cut(s)	104, 154, 595, 901, 1009, 1112
Sau96I	GGNCC	1 cut(s)	785
SfaNI	GCATC	3 cut(s)	438, 556, 658
SgrAI	CRCCGGYG	1 cut(s)	147
SinI	GGWCC	1 cut(s)	785
SmiMI	CAYNNNNRTG	2 cut(s)	150, 945
SmlI	CTYRAG	4 cut(s)	164, 453, 467, 989
SmoI	CTYRAG	4 cut(s)	164, 453, 467, 989
Sse9I	AATT	9 cut(s)	98, 343, 473, 492, 503, 836, 933, 1015, 1180
SspI	AATATT	1 cut(s)	860
SspMI	CTAG	1 cut(s)	648
StyI	CCWWGG	1 cut(s)	755
TaaI	ACNGT	5 cut(s)	521, 536, 746, 818, 1043
TaiI	ACGT	2 cut(s)	424, 708
TaqI	TCGA	5 cut(s)	255, 415, 603, 1005, 1119
TaqII	GACCGA	1 cut(s)	974
TasI	AATT	9 cut(s)	98, 343, 473, 492, 503, 836, 933, 1015, 1180
TfiI	GAWTC	4 cut(s)	119, 257, 428, 557
Tru1I	TTAA	3 cut(s)	165, 236, 1184
Tru9I	TTAA	3 cut(s)	165, 236, 1184
TseFI	GTSAC	2 cut(s)	740, 961
TseI	GCWGC	1 cut(s)	292
Tsp45I	GTSAC	2 cut(s)	740, 961
TspDTI	ATGAA	4 cut(s)	17, 791, 969, 1127
Vha464I	CTTAAG	1 cut(s)	164
VpaK11BI	GGWCC	1 cut(s)	785
XapI	RAATTY	3 cut(s)	503, 836, 1180
XceI	RCATGY	1 cut(s)	872
XmiI	GTMKAC	1 cut(s)	762
XspI	CTAG	1 cut(s)	648

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.