Rorug07G0339100

Belongs to the glycosyltransferase 31 family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
37333061 .. 37333261
201 bp
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UTR
Exon/CDS
Intron
Rorug07G0339100.1

Sequence Viewer

Length: 201 bp
ATGGGAGAGTATTTGTTTCCTGGCGATTTAAACAGTTCCTTATTAATTCTTTCAAGGACTCAGCGCTGTGTTACTTTGTTCCTTGCGTTCGAATTACGTCTGCAGTGCCGGTTTATTCATTGTTGGGAGTCTCTCCACTCAGAGCAAAGGCCCCAAAGTTTATACCAGTGGTTTGGGAGGCTCCTCCCTCAGGTTGGATAA

Protein Analysis

66

Amino Acids

7.83

Weight (kDa)

7.77

Isoelectric Point (pI)

53.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfeI AGCGCT 1 cut(s) 65
AfiI CCNNNNNNNGG 2 cut(s) 190, 194
AgsI TTSAA 1 cut(s) 54
AjnI CCWGG 1 cut(s) 19
Alw26I GTCTC 1 cut(s) 135
Aor51HI AGCGCT 1 cut(s) 65
AoxI GGCC 1 cut(s) 149
AseI ATTAAT 1 cut(s) 44
AspLEI GCGC 1 cut(s) 66
AspS9I GGNCC 1 cut(s) 150
AsuII TTCGAA 1 cut(s) 90
AxyI CCTNAGG 1 cut(s) 189
BciT130I CCWGG 1 cut(s) 21
BcoDI GTCTC 1 cut(s) 135
BfmI CTRYAG 1 cut(s) 101
BfoI RGCGCY 1 cut(s) 67
Bme1390I CCNGG 1 cut(s) 21
BmgT120I GGNCC 1 cut(s) 150
BmiI GGNNCC 2 cut(s) 152, 182
BmrFI CCNGG 1 cut(s) 21
Bpu14I TTCGAA 1 cut(s) 90
Bsc4I CCNNNNNNNGG 2 cut(s) 190, 194
Bse118I RCCGGY 1 cut(s) 108
Bse1I ACTGG 1 cut(s) 166
Bse21I CCTNAGG 1 cut(s) 189
BseBI CCWGG 1 cut(s) 21
BseLI CCNNNNNNNGG 2 cut(s) 190, 194
BseMII CTCAG 2 cut(s) 74, 153
BseNI ACTGG 1 cut(s) 166
BseRI GAGGAG 1 cut(s) 173
BshFI GGCC 1 cut(s) 151
BsiSI CCGG 1 cut(s) 109
BslI CCNNNNNNNGG 2 cut(s) 190, 194
BsmAI GTCTC 1 cut(s) 135
BsnI GGCC 1 cut(s) 151
Bsp119I TTCGAA 1 cut(s) 90
BspANI GGCC 1 cut(s) 151
BspCNI CTCAG 2 cut(s) 73, 152
BspLI GGNNCC 2 cut(s) 152, 182
BspMAI CTGCAG 1 cut(s) 105
BspT104I TTCGAA 1 cut(s) 90
BsrFI RCCGGY 1 cut(s) 108
BsrI ACTGG 1 cut(s) 166
BssAI RCCGGY 1 cut(s) 108
Bst2UI CCWGG 1 cut(s) 21
Bst4CI ACNGT 1 cut(s) 35
BstBI TTCGAA 1 cut(s) 90
BstDEI CTNAG 3 cut(s) 60, 139, 189
BstENI CCTNNNNNAGG 1 cut(s) 188
BstH2I RGCGCY 1 cut(s) 67
BstHHI GCGC 1 cut(s) 66
BstMAI GTCTC 1 cut(s) 135
BstNI CCWGG 1 cut(s) 21
BstSCI CCNGG 1 cut(s) 19
BstSFI CTRYAG 1 cut(s) 101
BstXI CCANNNNNNTGG 1 cut(s) 173
Bsu36I CCTNAGG 1 cut(s) 189
BsuRI GGCC 1 cut(s) 151
BtsI GCAGTG 1 cut(s) 110
BtsIMutI CAGTG 2 cut(s) 110, 173
CfoI GCGC 1 cut(s) 66
Cfr10I RCCGGY 1 cut(s) 108
Cfr13I GGNCC 1 cut(s) 150
CviJI RGCY 2 cut(s) 151, 181
CviKI_1 RGCY 2 cut(s) 151, 181
DdeI CTNAG 3 cut(s) 60, 139, 189
DraI TTTAAA 1 cut(s) 30
Eco47III AGCGCT 1 cut(s) 65
Eco81I CCTNAGG 1 cut(s) 189
EcoNI CCTNNNNNAGG 1 cut(s) 188
EcoO109I RGGNCCY 1 cut(s) 150
EcoRII CCWGG 1 cut(s) 19
FaiI YATR 1 cut(s) 163
GlaI GCGC 1 cut(s) 65
HaeII RGCGCY 1 cut(s) 67
HaeIII GGCC 1 cut(s) 151
HapII CCGG 1 cut(s) 109
HhaI GCGC 1 cut(s) 66
Hin6I GCGC 1 cut(s) 64
HinP1I GCGC 1 cut(s) 64
HinfI GANTC 2 cut(s) 58, 128
HpaII CCGG 1 cut(s) 109
Hpy188I TCNGA 1 cut(s) 142
HpyCH4III ACNGT 1 cut(s) 35
HpyCH4IV ACGT 1 cut(s) 97
HpyCH4V TGCA 1 cut(s) 103
HpyF3I CTNAG 3 cut(s) 60, 139, 189
HpySE526I ACGT 1 cut(s) 97
HspAI GCGC 1 cut(s) 64
LmnI GCTCC 1 cut(s) 186
LpnPI CCDG 5 cut(s) 6, 33, 122, 176, 179
MaeII ACGT 1 cut(s) 97
MaeIII GTNAC 1 cut(s) 70
MluCI AATT 2 cut(s) 45, 92
MlyI GAGTC 2 cut(s) 52, 137
MmeI TCCRAC 1 cut(s) 175
MnlI CCTC 3 cut(s) 171, 194, 198
MseI TTAA 2 cut(s) 29, 44
MspI CCGG 1 cut(s) 109
MspR9I CCNGG 1 cut(s) 21
MvaI CCWGG 1 cut(s) 21
NlaIV GGNNCC 2 cut(s) 152, 182
NspV TTCGAA 1 cut(s) 90
PleI GAGTC 2 cut(s) 52, 136
PpsI GAGTC 2 cut(s) 52, 136
PshBI ATTAAT 1 cut(s) 44
Psp6I CCWGG 1 cut(s) 19
PspGI CCWGG 1 cut(s) 19
PspN4I GGNNCC 2 cut(s) 152, 182
PspPI GGNCC 1 cut(s) 150
PstI CTGCAG 1 cut(s) 105
SaqAI TTAA 2 cut(s) 29, 44
Sau96I GGNCC 1 cut(s) 150
SchI GAGTC 2 cut(s) 52, 137
ScrFI CCNGG 1 cut(s) 21
SetI ASST 2 cut(s) 100, 195
SfcI CTRYAG 1 cut(s) 101
SfuI TTCGAA 1 cut(s) 90
SgeI CNNG 6 cut(s) 32, 33, 66, 95, 121, 178
Sse9I AATT 2 cut(s) 45, 92
StyD4I CCNGG 1 cut(s) 19
TaaI ACNGT 1 cut(s) 35
TaiI ACGT 1 cut(s) 100
TaqI TCGA 1 cut(s) 90
TasI AATT 2 cut(s) 45, 92
Tru1I TTAA 2 cut(s) 29, 44
Tru9I TTAA 2 cut(s) 29, 44
TscAI CASTG 2 cut(s) 110, 173
TspDTI ATGAA 1 cut(s) 107
TspRI CASTG 2 cut(s) 110, 173
VspI ATTAAT 1 cut(s) 44
XagI CCTNNNNNAGG 1 cut(s) 188
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.