Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007607

Physical Location & Seq

Genomic Coordinates Reverse (-)

29260621 .. 29263119

Gene Structure 2499 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G77810.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1164 bp

ATGAAGCACAAAGTCTCCAAACGAGTAATATCTCTGAAATGGGTTCCATTTCTCTGCATCTCTTTCTTCGCTCTCGGAGCAATCTTCACCTCCAGGTCATGGGAGCCGTCGTCAGATTCCGGAAGTCAGCTAATTTCACAGCATCATCGTGATCATGAACTTCAGATTGTATCTGACGATTGTGCTCATAATAAAAAAGCTACACAAGAAAAAGATGTAACTGGCGAAGTTTTGAGAACTCATGAAGCTATACAGGATGACAGGTCGTTGGATAAGTCAGTTTCTACACTTTCTTCTACAAGGAGCTCTCAAGAGATGGTTGATGGCTCGGAAACAAACCCGAGGAAGAAAGTGTTTATGGTAATGGGAATCAATACCGCATTTAGCAGTAGAAAACGGCGTGATTCAGTTAGAGAAACATGGATGCCTCAAGGTGAGAAGCTTGAAAGACTGGAACAGGAGAAGGGGATTGTGATCAAGTTCATGATTGGACACAGTGCGACGTCAAATAGTATATTGGATAGAGCTATTGATTCAGAAGATGCTCAACACAAAGACTTCCTTAGGCTGGAGCATGTTGAAGGATATCACGAACTCTCAGCAAAAACCAAGATATTCTTTTCCACTGCAGTAGCCAAATGGGATGCAGAGTTCTATATCAAGGTAGATGATGATGTTCACGTCAATCTCGGTATGCTTGCTTCCACACTTGCCCGTCACCGCTCAAAGCCGAGGGTTTATATTGGTTGTATGAAGTCAGGGCCTGTTCTTGCTCAGAAGACAGTAAAGTACCATGAACCTGAGTATTGGAAATTTGGAGAGGATGGTAACAAATACTTTCGACATGCTACAGGACAGATCTATGCCATCTCCAAGGATCTTGCTAATTACATATCCATCAACCAGCCAATTTTGCATAAGTATGCCAATGAAGATGTGTCTTTAGGGTCATGGTTTATCGGTCTTGAGGTTGAACATATTGATGACCGCAACTTCTGTTGTGGGACTCCTCCAGATTGTAGATGGAAGGCAGAGGCGGGCGATGTTTGTGTGGCCTCATTCGAATGGAGCTGTAGTGGGATTTGCAAGTCCGTAGAGAGAATGAAGATAGTGCATGAAGTTTGTAGTGAAGGAGAAGGAGCTGTTTGGAATACGCTTCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0008378 GO:0012505 GO:0016740 GO:0016757 GO:0016758 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048531

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4094 Galactosyl_T

Protein Analysis

387

Amino Acids

43.94

Weight (kDa)

6.63

Isoelectric Point (pI)

38.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF4094	PF13334	11 - 98	4.1e-23	Domain of unknown function (DUF4094)
Galactosyl_T	PF01762	132 - 329	1.2e-48	Galactosyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0007607)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22015 AT1G77810 AT1G77810
fragaria_vesca	FvH4_5g38810
malus_domestica	MD00G1104200.v1.1 MD15G1358800.v1.1
prunus_persica	Prupe.1G506600_v2.0.a1 Prupe.1G506600_v2.0.a1 Prupe.1G506600_v2.0.a1 Prupe.1G506600_v2.0.a1
pyrus_communis	pycom08g14830 pycom15g32130
rosa_chinensis	RchiOBHm_Chr7g0240811
rosa_laevigata	RLG00000000623
rosa_multiflora	Rmu_sc0004821.1_g000013 Rmu_sc0010888.1_g000005
rosa_roxburghii	Rroxscaffold_3G00219610
rosa_rugosa	Rorug07G0339000 Rorug07G0339100 Rorug07G0339200 Rorug07G0339300
rosa_samantha	Rh7AG493400 Rh7BG465400
rosa_wichuraiana	Rw7G041750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	506
AccB7I	CCANNNNNTGG	1 cut(s)	99
AccBSI	CCGCTC	1 cut(s)	723
AccIII	TCCGGA	1 cut(s)	119
AciI	CCGC	4 cut(s)	378, 721, 988, 1037
AclWI	GGATC	1 cut(s)	885
AcsI	RAATTY	1 cut(s)	812
AcuI	CTGAAG	1 cut(s)	146
AcyI	GRCGYC	1 cut(s)	503
AfaI	GTAC	1 cut(s)	791
AfiI	CCNNNNNNNGG	2 cut(s)	99, 568
AgsI	TTSAA	3 cut(s)	446, 581, 974
AjiI	CACGTC	1 cut(s)	682
AjnI	CCWGG	1 cut(s)	92
AloI	GAACNNNNNNTCC	2 cut(s)	635, 667
AluBI	AGCT	8 cut(s)	130, 200, 248, 306, 442, 527, 1071, 1142
AluI	AGCT	8 cut(s)	130, 200, 248, 306, 442, 527, 1071, 1142
Alw21I	GWGCWC	2 cut(s)	187, 308
Alw26I	GTCTC	1 cut(s)	19
AlwI	GGATC	1 cut(s)	885
AlwNI	CAGNNNCTG	1 cut(s)	764
Ama87I	CYCGRG	1 cut(s)	340
Aor13HI	TCCGGA	1 cut(s)	119
AoxI	GGCC	2 cut(s)	761, 1053
ApoI	RAATTY	1 cut(s)	812
AspS9I	GGNCC	1 cut(s)	761
AsuHPI	GGTGA	3 cut(s)	79, 446, 710
AsuII	TTCGAA	1 cut(s)	1062
AvaI	CYCGRG	1 cut(s)	340
AxyI	CCTNAGG	1 cut(s)	563
BanII	GRGCYC	1 cut(s)	308
BarI	GAAGNNNNNNTAC	2 cut(s)	685, 717
BbsI	GAAGAC	1 cut(s)	785
Bbv12I	GWGCWC	2 cut(s)	187, 308
BccI	CCATC	6 cut(s)	310, 317, 818, 875, 905, 1017
BceAI	ACGGC	2 cut(s)	91, 413
BciT130I	CCWGG	1 cut(s)	94
BclI	TGATCA	2 cut(s)	151, 474
BcoDI	GTCTC	1 cut(s)	19
BfmI	CTRYAG	3 cut(s)	627, 849, 1072
BglII	AGATCT	1 cut(s)	858
Bme1390I	CCNGG	1 cut(s)	94
BmeT110I	CYCGRG	1 cut(s)	340
BmgBI	CACGTC	1 cut(s)	682
BmgT120I	GGNCC	1 cut(s)	761
BmiI	GGNNCC	2 cut(s)	45, 105
BmrFI	CCNGG	1 cut(s)	94
BmsI	GCATC	5 cut(s)	66, 151, 414, 532, 634
BpiI	GAAGAC	1 cut(s)	785
BpmI	CTGGAG	3 cut(s)	76, 590, 996
Bpu14I	TTCGAA	1 cut(s)	1062
BpuEI	CTTGAG	3 cut(s)	294, 414, 986
BsaBI	GATNNNNATC	1 cut(s)	473
BsaHI	GRCGYC	1 cut(s)	503
BsaJI	CCNNGG	3 cut(s)	341, 731, 873
BsaWI	WCCGGW	1 cut(s)	119
BsaXI	ACNNNNNCTCC	5 cut(s)	29, 95, 125, 1060, 1090
Bsc4I	CCNNNNNNNGG	2 cut(s)	99, 568
Bse1I	ACTGG	2 cut(s)	226, 456
Bse21I	CCTNAGG	1 cut(s)	563
Bse8I	GATNNNNATC	1 cut(s)	473
BseAI	TCCGGA	1 cut(s)	119
BseBI	CCWGG	1 cut(s)	94
BseDI	CCNNGG	3 cut(s)	341, 731, 873
BseGI	GGATG	4 cut(s)	262, 429, 649, 829
BseJI	GATNNNNATC	1 cut(s)	473
BseLI	CCNNNNNNNGG	2 cut(s)	99, 568
BseMII	CTCAG	3 cut(s)	612, 788, 792
BseNI	ACTGG	2 cut(s)	226, 456
BseRI	GAGGAG	1 cut(s)	999
BshFI	GGCC	2 cut(s)	763, 1055
BsiHKAI	GWGCWC	2 cut(s)	187, 308
BsiHKCI	CYCGRG	1 cut(s)	340
BsiSI	CCGG	1 cut(s)	120
BslFI	GGGAC	1 cut(s)	1018
BslI	CCNNNNNNNGG	2 cut(s)	99, 568
BsmAI	GTCTC	1 cut(s)	19
BsmFI	GGGAC	1 cut(s)	1018
BsnI	GGCC	2 cut(s)	763, 1055
BsoBI	CYCGRG	1 cut(s)	340
Bsp119I	TTCGAA	1 cut(s)	1062
Bsp1286I	GDGCHC	2 cut(s)	187, 308
Bsp13I	TCCGGA	1 cut(s)	119
Bsp143I	GATC	4 cut(s)	151, 474, 858, 877
BspACI	CCGC	4 cut(s)	378, 721, 988, 1037
BspANI	GGCC	2 cut(s)	763, 1055
BspCNI	CTCAG	3 cut(s)	611, 787, 793
BspEI	TCCGGA	1 cut(s)	119
BspHI	TCATGA	3 cut(s)	154, 241, 483
BspLI	GGNNCC	2 cut(s)	45, 105
BspMAI	CTGCAG	1 cut(s)	631
BspPI	GGATC	1 cut(s)	885
BspT104I	TTCGAA	1 cut(s)	1062
BsrBI	CCGCTC	1 cut(s)	723
BsrI	ACTGG	2 cut(s)	226, 456
BssECI	CCNNGG	3 cut(s)	341, 731, 873
BssMI	GATC	4 cut(s)	151, 474, 858, 877
BssNI	GRCGYC	1 cut(s)	503
BssT1I	CCWWGG	1 cut(s)	873
Bst2UI	CCWGG	1 cut(s)	94
Bst4CI	ACNGT	2 cut(s)	497, 784
BstACI	GRCGYC	1 cut(s)	503
BstBI	TTCGAA	1 cut(s)	1062
BstC8I	GCNNGC	2 cut(s)	699, 1039
BstDEI	CTNAG	4 cut(s)	563, 598, 774, 801
BstF5I	GGATG	4 cut(s)	262, 429, 649, 829
BstKTI	GATC	4 cut(s)	154, 477, 861, 880
BstMAI	GTCTC	1 cut(s)	19
BstMBI	GATC	4 cut(s)	151, 474, 858, 877
BstMWI	GCNNNNNNNGC	2 cut(s)	77, 913
BstNI	CCWGG	1 cut(s)	94
BstNSI	RCATGY	2 cut(s)	578, 848
BstSCI	CCNGG	1 cut(s)	92
BstSFI	CTRYAG	3 cut(s)	627, 849, 1072
BstV2I	GAAGAC	1 cut(s)	785
BstX2I	RGATCY	2 cut(s)	858, 877
BstYI	RGATCY	2 cut(s)	858, 877
Bsu36I	CCTNAGG	1 cut(s)	563
BsuRI	GGCC	2 cut(s)	763, 1055
BtgZI	GCGATG	1 cut(s)	1056
BtrI	CACGTC	1 cut(s)	682
BtsCI	GGATG	4 cut(s)	262, 429, 649, 829
BtsI	GCAGTG	1 cut(s)	624
BtsIMutI	CAGTG	2 cut(s)	502, 624
Cac8I	GCNNGC	2 cut(s)	699, 1039
CaiI	CAGNNNCTG	1 cut(s)	764
CciI	TCATGA	3 cut(s)	154, 241, 483
Cfr13I	GGNCC	1 cut(s)	761
Csp6I	GTAC	1 cut(s)	790
CviQI	GTAC	1 cut(s)	790
DdeI	CTNAG	4 cut(s)	563, 598, 774, 801
DpnI	GATC	4 cut(s)	153, 476, 860, 879
DpnII	GATC	4 cut(s)	151, 474, 858, 877
Ecl136II	GAGCTC	1 cut(s)	306
Eco130I	CCWWGG	1 cut(s)	873
Eco24I	GRGCYC	1 cut(s)	308
Eco32I	GATATC	1 cut(s)	587
Eco53kI	GAGCTC	1 cut(s)	306
Eco57I	CTGAAG	1 cut(s)	146
Eco81I	CCTNAGG	1 cut(s)	563
Eco88I	CYCGRG	1 cut(s)	340
EcoICRI	GAGCTC	1 cut(s)	306
EcoO109I	RGGNCCY	1 cut(s)	761
EcoRII	CCWGG	1 cut(s)	92
EcoRV	GATATC	1 cut(s)	587
EcoT14I	CCWWGG	1 cut(s)	873
EcoT38I	GRGCYC	1 cut(s)	308
ErhI	CCWWGG	1 cut(s)	873
FalI	AAGNNNNNCTT	4 cut(s)	546, 578, 602, 634
FaqI	GGGAC	1 cut(s)	1018
FauI	CCCGC	1 cut(s)	1030
FbaI	TGATCA	2 cut(s)	151, 474
FokI	GGATG	4 cut(s)	269, 436, 656, 836
FriOI	GRGCYC	1 cut(s)	308
GsuI	CTGGAG	3 cut(s)	76, 590, 996
HaeIII	GGCC	2 cut(s)	763, 1055
HapII	CCGG	1 cut(s)	120
Hin1I	GRCGYC	1 cut(s)	503
HindIII	AAGCTT	1 cut(s)	440
HinfI	GANTC	5 cut(s)	116, 369, 404, 533, 1006
HpaII	CCGG	1 cut(s)	120
HphI	GGTGA	3 cut(s)	79, 446, 710
Hpy166II	GTNNAC	1 cut(s)	679
Hpy188I	TCNGA	8 cut(s)	36, 77, 115, 165, 175, 331, 538, 777
Hpy188III	TCNNGA	9 cut(s)	120, 149, 155, 242, 311, 484, 590, 965, 1013
Hpy8I	GTNNAC	1 cut(s)	679
Hpy99I	CGWCG	2 cut(s)	112, 505
HpyAV	CCTTC	5 cut(s)	457, 575, 1021, 1124, 1130
HpyCH4III	ACNGT	2 cut(s)	497, 784
HpyCH4IV	ACGT	2 cut(s)	503, 681
HpyCH4V	TGCA	6 cut(s)	57, 629, 647, 916, 1086, 1114
HpyF10VI	GCNNNNNNNGC	2 cut(s)	77, 913
HpyF3I	CTNAG	4 cut(s)	563, 598, 774, 801
HpySE526I	ACGT	2 cut(s)	503, 681
Hsp92I	GRCGYC	1 cut(s)	503
Kpn2I	TCCGGA	1 cut(s)	119
Ksp22I	TGATCA	2 cut(s)	151, 474
Kzo9I	GATC	4 cut(s)	151, 474, 858, 877
LmnI	GCTCC	6 cut(s)	77, 103, 303, 571, 1068, 1139
LweI	GCATC	5 cut(s)	66, 151, 414, 532, 634
MaeII	ACGT	2 cut(s)	503, 681
MaeIII	GTNAC	3 cut(s)	217, 716, 827
MalI	GATC	4 cut(s)	153, 476, 860, 879
MbiI	CCGCTC	1 cut(s)	723
MboI	GATC	4 cut(s)	151, 474, 858, 877
MboII	GAAGA	8 cut(s)	58, 76, 285, 358, 551, 790, 944, 1117
MflI	RGATCY	2 cut(s)	858, 877
MhlI	GDGCHC	2 cut(s)	187, 308
MluCI	AATT	4 cut(s)	132, 812, 886, 909
MlyI	GAGTC	1 cut(s)	1000
MmeI	TCCRAC	1 cut(s)	249
MnlI	CCTC	9 cut(s)	100, 336, 438, 726, 814, 961, 1020, 1027, 1066
MroI	TCCGGA	1 cut(s)	119
MslI	CAYNNNNRTG	4 cut(s)	147, 921, 981, 1063
MspI	CCGG	1 cut(s)	120
MspR9I	CCNGG	1 cut(s)	94
MvaI	CCWGG	1 cut(s)	94
MwoI	GCNNNNNNNGC	2 cut(s)	77, 913
NdeII	GATC	4 cut(s)	151, 474, 858, 877
NlaIV	GGNNCC	2 cut(s)	45, 105
NmeAIII	GCCGAG	1 cut(s)	756
NmuCI	GTSAC	1 cut(s)	716
NspI	RCATGY	2 cut(s)	578, 848
NspV	TTCGAA	1 cut(s)	1062
PagI	TCATGA	3 cut(s)	154, 241, 483
PfeI	GAWTC	4 cut(s)	116, 369, 404, 533
PflMI	CCANNNNNTGG	1 cut(s)	99
PleI	GAGTC	1 cut(s)	1000
PpsI	GAGTC	1 cut(s)	1000
Psp124BI	GAGCTC	1 cut(s)	308
Psp6I	CCWGG	1 cut(s)	92
PspGI	CCWGG	1 cut(s)	92
PspN4I	GGNNCC	2 cut(s)	45, 105
PspPI	GGNCC	1 cut(s)	761
PstI	CTGCAG	1 cut(s)	631
PstNI	CAGNNNCTG	1 cut(s)	764
PsuI	RGATCY	2 cut(s)	858, 877
RsaI	GTAC	1 cut(s)	791
RsaNI	GTAC	1 cut(s)	790
RseI	CAYNNNNRTG	4 cut(s)	147, 921, 981, 1063
SacI	GAGCTC	1 cut(s)	308
Sau3AI	GATC	4 cut(s)	151, 474, 858, 877
Sau96I	GGNCC	1 cut(s)	761
SchI	GAGTC	1 cut(s)	1000
ScrFI	CCNGG	1 cut(s)	94
SduI	GDGCHC	2 cut(s)	187, 308
SfaNI	GCATC	5 cut(s)	66, 151, 414, 532, 634
SfcI	CTRYAG	3 cut(s)	627, 849, 1072
SfuI	TTCGAA	1 cut(s)	1062
SmiMI	CAYNNNNRTG	4 cut(s)	147, 921, 981, 1063
SmlI	CTYRAG	3 cut(s)	309, 429, 965
SmoI	CTYRAG	3 cut(s)	309, 429, 965
Sse9I	AATT	4 cut(s)	132, 812, 886, 909
SsiI	CCGC	4 cut(s)	378, 721, 988, 1037
SstI	GAGCTC	1 cut(s)	308
StyD4I	CCNGG	1 cut(s)	92
StyI	CCWWGG	1 cut(s)	873
TaaI	ACNGT	2 cut(s)	497, 784
TaiI	ACGT	2 cut(s)	506, 684
TaqI	TCGA	2 cut(s)	841, 1062
TaqII	GACCGA	1 cut(s)	950
TasI	AATT	4 cut(s)	132, 812, 886, 909
TfiI	GAWTC	4 cut(s)	116, 369, 404, 533
TscAI	CASTG	2 cut(s)	502, 631
TseFI	GTSAC	1 cut(s)	716
Tsp45I	GTSAC	1 cut(s)	716
TspDTI	ATGAA	9 cut(s)	17, 171, 258, 472, 767, 810, 945, 1118, 1131
TspGWI	ACGGA	1 cut(s)	1081
TspRI	CASTG	2 cut(s)	502, 631
Van91I	CCANNNNNTGG	1 cut(s)	99
XapI	RAATTY	1 cut(s)	812
XceI	RCATGY	2 cut(s)	578, 848
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1020
ZraI	GACGTC	1 cut(s)	504

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.