Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005165

Physical Location & Seq

Genomic Coordinates Forward (+)

9246857 .. 9248274

Gene Structure 1418 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G26750.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 588 bp

ATGTCGTGGATGAAAGGTGATTTACTTTCCAAAACCAGGAGGCTTGTTGGTGGCTTAGCTACACGAGAGCCTGTTTGGCTTAAAGCCATGGAAGCATCACCACCTCCTGTGTTTCCTCGCTCCAATGGAAAAATCCAGAAGATTGTTCTCCCTGAGGATCCTTACGTTCGTAAATTCGCTAATAAGCATCCTGGAACCAAAATTGATGACCCTGCCAAGATATCAGCATTTATTCCAGATCAAGCACGTGTGTATGGTTGCCGGGTACTTGAATTGAAGGAGCATGGCATCAGTGAGGGTGACGCCATGTCTGTAGCTAATATGGAATATCTTTCAGAGAGAAAGGAAATGAAGAAAGCATACAAACGCTTAAAGGAGCTTGCGGTAATGCAAGATAAGGATCCACCTCCTAAACCGTATCCTAGTGCCAAGAAAGGGTTAATAACTCAATCGAAGACATCCGCTAAGGATCGCTTCCAGACTCCTAGCGTCCGCAGGCTAGTTAACCAGTTGAAAAATGAGAAAGATGTGTTGCTGCAAGACAGAACCGGAGGAAGTGCTAATCAGGATAATTGGATCGACGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

195

Amino Acids

22.05

Weight (kDa)

9.68

Isoelectric Point (pI)

39.84

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005165)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26750
fragaria_vesca	FvH4_1g30250 FvH4_1g30250 FvH4_1g30250 FvH4_1g30250
malus_domestica	MD01G1063000.v1.1 MD07G1136300.v1.1
prunus_persica	Prupe.2G171300_v2.0.a1 Prupe.2G171300_v2.0.a1 Prupe.2G171300_v2.0.a1
pyrus_communis	pycom01g09340 pycom07g13360
rosa_chinensis	RchiOBHm_Chr6g0271051 RchiOBHm_Chr7g0220351
rosa_laevigata	RLG00000002228
rosa_multiflora	Rmu_sc0001136.1_g000086 Rmu_sc0001565.1_g000063
rosa_roxburghii	Rroxscaffold_3G00239510
rosa_rugosa	Rorug06G0058100 Rorug07G0193100
rosa_samantha	Rh6AG178100 Rh6BG181300 Rh6CG177100 Rh6DG169300 Rh7AG334400 Rh7BG325300 Rh7CG352100 Rh7DG331100
rosa_wichuraiana	Rw0G009890 Rw7G028270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	3 cut(s)	383, 462, 493
AclWI	GGATC	6 cut(s)	152, 165, 395, 408, 477, 584
AcsI	RAATTY	1 cut(s)	173
AcvI	CACGTG	1 cut(s)	248
AcyI	GRCGYC	1 cut(s)	303
AfaI	GTAC	1 cut(s)	267
AfiI	CCNNNNNNNGG	2 cut(s)	36, 435
AflIII	ACRYGT	1 cut(s)	247
AgsI	TTSAA	3 cut(s)	272, 277, 514
AhdI	GACNNNNNGTC	1 cut(s)	307
AjnI	CCWGG	2 cut(s)	35, 190
AluBI	AGCT	3 cut(s)	59, 317, 379
AluI	AGCT	3 cut(s)	59, 317, 379
AlwI	GGATC	6 cut(s)	152, 165, 395, 408, 477, 584
ApeKI	GCWGC	1 cut(s)	535
ApoI	RAATTY	1 cut(s)	173
AsuC2I	CCSGG	1 cut(s)	263
AsuHPI	GGTGA	3 cut(s)	29, 90, 311
AxyI	CCTNAGG	1 cut(s)	153
BamHI	GGATCC	2 cut(s)	157, 400
BarI	GAAGNNNNNNTAC	2 cut(s)	344, 376
BauI	CACGAG	1 cut(s)	63
BbrPI	CACGTG	1 cut(s)	248
BbsI	GAAGAC	1 cut(s)	461
BbvI	GCAGC	1 cut(s)	522
BciT130I	CCWGG	2 cut(s)	37, 192
BciVI	GTATCC	1 cut(s)	429
BcnI	CCSGG	1 cut(s)	263
BfaI	CTAG	3 cut(s)	423, 486, 500
BfmI	CTRYAG	1 cut(s)	312
BfuI	GTATCC	1 cut(s)	429
BglI	GCCNNNNNGGC	1 cut(s)	76
BisI	GCNGC	1 cut(s)	536
BlpI	GCTNAGC	1 cut(s)	55
BlsI	GCNGC	1 cut(s)	537
Bme1390I	CCNGG	3 cut(s)	37, 192, 263
BmeRI	GACNNNNNGTC	1 cut(s)	307
BmiI	GGNNCC	3 cut(s)	159, 196, 402
BmrFI	CCNGG	3 cut(s)	37, 192, 263
BmsI	GCATC	3 cut(s)	104, 196, 297
BpiI	GAAGAC	1 cut(s)	461
Bpu10I	CCTNAGC	1 cut(s)	465
Bpu1102I	GCTNAGC	1 cut(s)	55
BpuMI	CCSGG	1 cut(s)	263
BsaAI	YACGTR	1 cut(s)	248
BsaBI	GATNNNNATC	1 cut(s)	399
BsaHI	GRCGYC	1 cut(s)	303
BsaJI	CCNNGG	1 cut(s)	87
BsaWI	WCCGGW	1 cut(s)	548
Bsc4I	CCNNNNNNNGG	2 cut(s)	36, 435
Bse1I	ACTGG	1 cut(s)	508
Bse21I	CCTNAGG	1 cut(s)	153
Bse8I	GATNNNNATC	1 cut(s)	399
BseBI	CCWGG	2 cut(s)	37, 192
BseDI	CCNNGG	1 cut(s)	87
BseGI	GGATG	3 cut(s)	15, 187, 458
BseJI	GATNNNNATC	1 cut(s)	399
BseLI	CCNNNNNNNGG	2 cut(s)	36, 435
BseMII	CTCAG	1 cut(s)	144
BseNI	ACTGG	1 cut(s)	508
BseXI	GCAGC	1 cut(s)	522
BsiSI	CCGG	2 cut(s)	262, 549
BslI	CCNNNNNNNGG	2 cut(s)	36, 435
Bsp143I	GATC	5 cut(s)	157, 238, 400, 469, 576
Bsp1720I	GCTNAGC	1 cut(s)	55
Bsp19I	CCATGG	1 cut(s)	87
BspACI	CCGC	3 cut(s)	383, 462, 493
BspCNI	CTCAG	1 cut(s)	145
BspLI	GGNNCC	3 cut(s)	159, 196, 402
BspPI	GGATC	6 cut(s)	152, 165, 395, 408, 477, 584
BsrI	ACTGG	1 cut(s)	508
BssECI	CCNNGG	1 cut(s)	87
BssMI	GATC	5 cut(s)	157, 238, 400, 469, 576
BssNI	GRCGYC	1 cut(s)	303
BssSI	CACGAG	1 cut(s)	63
BssT1I	CCWWGG	1 cut(s)	87
Bst2BI	CACGAG	1 cut(s)	63
Bst2UI	CCWGG	2 cut(s)	37, 192
Bst4CI	ACNGT	1 cut(s)	417
BstACI	GRCGYC	1 cut(s)	303
BstBAI	YACGTR	1 cut(s)	248
BstC8I	GCNNGC	2 cut(s)	381, 497
BstDEI	CTNAG	3 cut(s)	55, 153, 465
BstDSI	CCRYGG	1 cut(s)	87
BstF5I	GGATG	3 cut(s)	15, 187, 458
BstKTI	GATC	5 cut(s)	160, 241, 403, 472, 579
BstMBI	GATC	5 cut(s)	157, 238, 400, 469, 576
BstMWI	GCNNNNNNNGC	2 cut(s)	76, 92
BstNI	CCWGG	2 cut(s)	37, 192
BstSCI	CCNGG	3 cut(s)	35, 190, 261
BstSFI	CTRYAG	1 cut(s)	312
BstV1I	GCAGC	1 cut(s)	522
BstV2I	GAAGAC	1 cut(s)	461
BstX2I	RGATCY	2 cut(s)	157, 400
BstYI	RGATCY	2 cut(s)	157, 400
Bsu36I	CCTNAGG	1 cut(s)	153
BsuI	GTATCC	1 cut(s)	429
BtgI	CCRYGG	1 cut(s)	87
BtsCI	GGATG	3 cut(s)	15, 187, 458
BtsIMutI	CAGTG	1 cut(s)	298
Cac8I	GCNNGC	2 cut(s)	381, 497
CseI	GACGC	2 cut(s)	311, 478
Csp6I	GTAC	1 cut(s)	266
CviAII	CATG	3 cut(s)	88, 284, 307
CviJI	RGCY	9 cut(s)	43, 54, 59, 70, 79, 86, 317, 379, 499
CviKI_1	RGCY	9 cut(s)	43, 54, 59, 70, 79, 86, 317, 379, 499
CviQI	GTAC	1 cut(s)	266
DdeI	CTNAG	3 cut(s)	55, 153, 465
DpnI	GATC	5 cut(s)	159, 240, 402, 471, 578
DpnII	GATC	5 cut(s)	157, 238, 400, 469, 576
DriI	GACNNNNNGTC	1 cut(s)	307
Eam1105I	GACNNNNNGTC	1 cut(s)	307
Eco130I	CCWWGG	1 cut(s)	87
Eco32I	GATATC	1 cut(s)	222
Eco72I	CACGTG	1 cut(s)	248
Eco81I	CCTNAGG	1 cut(s)	153
EcoRII	CCWGG	2 cut(s)	35, 190
EcoRV	GATATC	1 cut(s)	222
EcoT14I	CCWWGG	1 cut(s)	87
ErhI	CCWWGG	1 cut(s)	87
FaeI	CATG	3 cut(s)	91, 287, 310
FaiI	YATR	6 cut(s)	89, 255, 285, 308, 323, 361
FalI	AAGNNNNNCTT	2 cut(s)	458, 490
FatI	CATG	3 cut(s)	87, 283, 306
Fnu4HI	GCNGC	1 cut(s)	536
FokI	GGATG	3 cut(s)	22, 174, 445
Fsp4HI	GCNGC	1 cut(s)	536
FspBI	CTAG	3 cut(s)	423, 486, 500
GluI	GCNGC	1 cut(s)	536
HapII	CCGG	2 cut(s)	262, 549
HgaI	GACGC	2 cut(s)	311, 478
Hin1I	GRCGYC	1 cut(s)	303
Hin1II	CATG	3 cut(s)	91, 287, 310
HincII	GTYRAC	1 cut(s)	505
HindII	GTYRAC	1 cut(s)	505
HinfI	GANTC	1 cut(s)	481
HpaI	GTTAAC	1 cut(s)	505
HpaII	CCGG	2 cut(s)	262, 549
HphI	GGTGA	3 cut(s)	29, 90, 311
Hpy166II	GTNNAC	1 cut(s)	505
Hpy188I	TCNGA	1 cut(s)	337
Hpy188III	TCNNGA	4 cut(s)	136, 236, 478, 566
Hpy8I	GTNNAC	1 cut(s)	505
Hpy99I	CGWCG	1 cut(s)	584
HpyAV	CCTTC	1 cut(s)	271
HpyCH4III	ACNGT	1 cut(s)	417
HpyCH4IV	ACGT	2 cut(s)	165, 247
HpyCH4V	TGCA	2 cut(s)	391, 538
HpyF10VI	GCNNNNNNNGC	2 cut(s)	76, 92
HpyF3I	CTNAG	3 cut(s)	55, 153, 465
HpySE526I	ACGT	2 cut(s)	165, 247
Hsp92I	GRCGYC	1 cut(s)	303
Hsp92II	CATG	3 cut(s)	91, 287, 310
KspAI	GTTAAC	1 cut(s)	505
Kzo9I	GATC	5 cut(s)	157, 238, 400, 469, 576
LmnI	GCTCC	3 cut(s)	125, 280, 376
Lsp1109I	GCAGC	1 cut(s)	522
LweI	GCATC	3 cut(s)	104, 196, 297
MaeI	CTAG	3 cut(s)	423, 486, 500
MaeII	ACGT	2 cut(s)	165, 247
MaeIII	GTNAC	1 cut(s)	299
MalI	GATC	5 cut(s)	159, 240, 402, 471, 578
MboI	GATC	5 cut(s)	157, 238, 400, 469, 576
MboII	GAAGA	3 cut(s)	151, 364, 466
MflI	RGATCY	2 cut(s)	157, 400
MluCI	AATT	4 cut(s)	173, 201, 272, 571
MlyI	GAGTC	1 cut(s)	475
MnlI	CCTC	7 cut(s)	33, 114, 126, 148, 289, 417, 545
MseI	TTAA	4 cut(s)	81, 371, 440, 504
MspI	CCGG	2 cut(s)	262, 549
MspR9I	CCNGG	3 cut(s)	37, 192, 263
MvaI	CCWGG	2 cut(s)	37, 192
MwoI	GCNNNNNNNGC	2 cut(s)	76, 92
NciI	CCSGG	1 cut(s)	263
NcoI	CCATGG	1 cut(s)	87
NdeII	GATC	5 cut(s)	157, 238, 400, 469, 576
NlaIII	CATG	3 cut(s)	91, 287, 310
NlaIV	GGNNCC	3 cut(s)	159, 196, 402
NmuCI	GTSAC	1 cut(s)	299
PfoI	TCCNGGA	1 cut(s)	190
PkrI	GCNGC	1 cut(s)	537
PleI	GAGTC	1 cut(s)	475
PmaCI	CACGTG	1 cut(s)	248
PmlI	CACGTG	1 cut(s)	248
PpsI	GAGTC	1 cut(s)	475
Ppu21I	YACGTR	1 cut(s)	248
Psp6I	CCWGG	2 cut(s)	35, 190
PspCI	CACGTG	1 cut(s)	248
PspGI	CCWGG	2 cut(s)	35, 190
PspN4I	GGNNCC	3 cut(s)	159, 196, 402
PsuI	RGATCY	2 cut(s)	157, 400
RsaI	GTAC	1 cut(s)	267
RsaNI	GTAC	1 cut(s)	266
SaqAI	TTAA	4 cut(s)	81, 371, 440, 504
SatI	GCNGC	1 cut(s)	536
Sau3AI	GATC	5 cut(s)	157, 238, 400, 469, 576
SchI	GAGTC	1 cut(s)	475
ScrFI	CCNGG	3 cut(s)	37, 192, 263
SetI	ASST	8 cut(s)	19, 61, 106, 168, 250, 319, 381, 409
SfaNI	GCATC	3 cut(s)	104, 196, 297
SfcI	CTRYAG	1 cut(s)	312
Sse9I	AATT	4 cut(s)	173, 201, 272, 571
SsiI	CCGC	3 cut(s)	383, 462, 493
SspMI	CTAG	3 cut(s)	423, 486, 500
StyD4I	CCNGG	3 cut(s)	35, 190, 261
StyI	CCWWGG	1 cut(s)	87
TaaI	ACNGT	1 cut(s)	417
TaiI	ACGT	2 cut(s)	168, 250
TaqI	TCGA	2 cut(s)	452, 579
TasI	AATT	4 cut(s)	173, 201, 272, 571
Tru1I	TTAA	4 cut(s)	81, 371, 440, 504
Tru9I	TTAA	4 cut(s)	81, 371, 440, 504
TscAI	CASTG	1 cut(s)	298
TseFI	GTSAC	1 cut(s)	299
TseI	GCWGC	1 cut(s)	535
Tsp45I	GTSAC	1 cut(s)	299
TspDTI	ATGAA	2 cut(s)	26, 365
TspRI	CASTG	1 cut(s)	298
XapI	RAATTY	1 cut(s)	173
XspI	CTAG	3 cut(s)	423, 486, 500

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.