No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G26750 |
| fragaria_vesca | FvH4_1g30250 FvH4_1g30250 FvH4_1g30250 FvH4_1g30250 |
| malus_domestica | MD01G1063000.v1.1 MD07G1136300.v1.1 |
| prunus_persica | Prupe.2G171300_v2.0.a1 Prupe.2G171300_v2.0.a1 Prupe.2G171300_v2.0.a1 |
| pyrus_communis | pycom01g09340 pycom07g13360 |
| rosa_chinensis | RchiOBHm_Chr6g0271051 RchiOBHm_Chr7g0220351 |
| rosa_laevigata | RLG00000002228 |
| rosa_multiflora | Rmu_sc0001136.1_g000086 Rmu_sc0001565.1_g000063 |
| rosa_roxburghii | Rroxscaffold_3G00239510 |
| rosa_rugosa | Rorug06G0058100 Rorug07G0193100 |
| rosa_samantha | Rh6AG178100 Rh6BG181300 Rh6CG177100 Rh6DG169300 Rh7AG334400 Rh7BG325300 Rh7CG352100 Rh7DG331100 |
| rosa_wichuraiana | Rw0G009890 Rw7G028270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 3 cut(s) | 146, 224, 540 |
| AcoI | YGGCCR | 2 cut(s) | 57, 733 |
| AcsI | RAATTY | 1 cut(s) | 486 |
| AfaI | GTAC | 1 cut(s) | 80 |
| AgsI | TTSAA | 2 cut(s) | 274, 370 |
| AjiI | CACGTC | 1 cut(s) | 383 |
| AluBI | AGCT | 3 cut(s) | 43, 443, 677 |
| AluI | AGCT | 3 cut(s) | 43, 443, 677 |
| AlwI | GGATC | 3 cut(s) | 146, 224, 540 |
| AoxI | GGCC | 3 cut(s) | 57, 398, 733 |
| ApoI | RAATTY | 1 cut(s) | 486 |
| AsuC2I | CCSGG | 1 cut(s) | 329 |
| BalI | TGGCCA | 1 cut(s) | 59 |
| BauI | CACGAG | 1 cut(s) | 117 |
| BbsI | GAAGAC | 1 cut(s) | 210 |
| BbvCI | CCTCAGC | 1 cut(s) | 444 |
| BcnI | CCSGG | 1 cut(s) | 329 |
| BisI | GCNGC | 3 cut(s) | 571, 619, 631 |
| BlpI | GCTNAGC | 1 cut(s) | 66 |
| BlsI | GCNGC | 3 cut(s) | 572, 620, 632 |
| Bme1390I | CCNGG | 1 cut(s) | 329 |
| BmgBI | CACGTC | 1 cut(s) | 383 |
| BmrFI | CCNGG | 1 cut(s) | 329 |
| BmsI | GCATC | 2 cut(s) | 115, 193 |
| BpiI | GAAGAC | 1 cut(s) | 210 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 127, 159, 388, 420 |
| BpmI | CTGGAG | 2 cut(s) | 222, 693 |
| Bpu10I | CCTNAGC | 1 cut(s) | 444 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 66 |
| BpuEI | CTTGAG | 1 cut(s) | 287 |
| BpuMI | CCSGG | 1 cut(s) | 329 |
| BsaJI | CCNNGG | 2 cut(s) | 60, 87 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 440, 470, 691, 721 |
| Bse118I | RCCGGY | 1 cut(s) | 735 |
| Bse3DI | GCAATG | 1 cut(s) | 309 |
| BseDI | CCNNGG | 2 cut(s) | 60, 87 |
| BseGI | GGATG | 2 cut(s) | 160, 184 |
| BseMI | GCAATG | 1 cut(s) | 309 |
| BseMII | CTCAG | 2 cut(s) | 57, 435 |
| BseRI | GAGGAG | 2 cut(s) | 393, 461 |
| BshFI | GGCC | 3 cut(s) | 59, 400, 735 |
| BsiSI | CCGG | 2 cut(s) | 328, 736 |
| BsnI | GGCC | 3 cut(s) | 59, 400, 735 |
| Bsp143I | GATC | 3 cut(s) | 138, 229, 532 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 66 |
| Bsp19I | CCATGG | 1 cut(s) | 87 |
| BspANI | GGCC | 3 cut(s) | 59, 400, 735 |
| BspCNI | CTCAG | 2 cut(s) | 58, 436 |
| BspHI | TCATGA | 1 cut(s) | 9 |
| BspPI | GGATC | 3 cut(s) | 146, 224, 540 |
| BsrDI | GCAATG | 1 cut(s) | 309 |
| BsrFI | RCCGGY | 1 cut(s) | 735 |
| BssAI | RCCGGY | 1 cut(s) | 735 |
| BssECI | CCNNGG | 2 cut(s) | 60, 87 |
| BssMI | GATC | 3 cut(s) | 138, 229, 532 |
| BssSI | CACGAG | 1 cut(s) | 117 |
| BssT1I | CCWWGG | 2 cut(s) | 60, 87 |
| Bst2BI | CACGAG | 1 cut(s) | 117 |
| Bst4CI | ACNGT | 1 cut(s) | 470 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 362 |
| BstC8I | GCNNGC | 1 cut(s) | 679 |
| BstDEI | CTNAG | 2 cut(s) | 66, 444 |
| BstDSI | CCRYGG | 1 cut(s) | 87 |
| BstF5I | GGATG | 2 cut(s) | 160, 184 |
| BstKTI | GATC | 3 cut(s) | 141, 232, 535 |
| BstMBI | GATC | 3 cut(s) | 138, 229, 532 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 362, 570, 618, 627, 639, 687 |
| BstSCI | CCNGG | 1 cut(s) | 327 |
| BstV2I | GAAGAC | 1 cut(s) | 210 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 43 |
| BsuRI | GGCC | 3 cut(s) | 59, 400, 735 |
| BtgI | CCRYGG | 1 cut(s) | 87 |
| BtrI | CACGTC | 1 cut(s) | 383 |
| BtsCI | GGATG | 2 cut(s) | 160, 184 |
| BtsI | GCAGTG | 5 cut(s) | 619, 667, 673, 712, 724 |
| BtsIMutI | CAGTG | 5 cut(s) | 619, 667, 673, 712, 724 |
| Cac8I | GCNNGC | 1 cut(s) | 679 |
| CciI | TCATGA | 1 cut(s) | 9 |
| Cfr10I | RCCGGY | 1 cut(s) | 735 |
| CseI | GACGC | 1 cut(s) | 215 |
| Csp6I | GTAC | 1 cut(s) | 79 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 291, 326 |
| CviAII | CATG | 5 cut(s) | 10, 88, 200, 634, 682 |
| CviQI | GTAC | 1 cut(s) | 79 |
| DdeI | CTNAG | 2 cut(s) | 66, 444 |
| DpnI | GATC | 3 cut(s) | 140, 231, 534 |
| DpnII | GATC | 3 cut(s) | 138, 229, 532 |
| EaeI | YGGCCR | 2 cut(s) | 57, 733 |
| Eco130I | CCWWGG | 2 cut(s) | 60, 87 |
| Eco147I | AGGCCT | 1 cut(s) | 400 |
| EcoRI | GAATTC | 1 cut(s) | 486 |
| EcoT14I | CCWWGG | 2 cut(s) | 60, 87 |
| ErhI | CCWWGG | 2 cut(s) | 60, 87 |
| FaeI | CATG | 5 cut(s) | 13, 91, 203, 637, 685 |
| FatI | CATG | 5 cut(s) | 9, 87, 199, 633, 681 |
| FauNDI | CATATG | 1 cut(s) | 358 |
| Fnu4HI | GCNGC | 3 cut(s) | 571, 619, 631 |
| FokI | GGATG | 2 cut(s) | 167, 171 |
| Fsp4HI | GCNGC | 3 cut(s) | 571, 619, 631 |
| GluI | GCNGC | 3 cut(s) | 571, 619, 631 |
| GsuI | CTGGAG | 2 cut(s) | 222, 693 |
| HaeIII | GGCC | 3 cut(s) | 59, 400, 735 |
| HapII | CCGG | 2 cut(s) | 328, 736 |
| HgaI | GACGC | 1 cut(s) | 215 |
| Hin1II | CATG | 5 cut(s) | 13, 91, 203, 637, 685 |
| HincII | GTYRAC | 1 cut(s) | 386 |
| HindII | GTYRAC | 1 cut(s) | 386 |
| HinfI | GANTC | 1 cut(s) | 191 |
| HpaII | CCGG | 2 cut(s) | 328, 736 |
| Hpy166II | GTNNAC | 2 cut(s) | 160, 386 |
| Hpy188I | TCNGA | 2 cut(s) | 135, 292 |
| Hpy188III | TCNNGA | 3 cut(s) | 10, 188, 536 |
| Hpy8I | GTNNAC | 2 cut(s) | 160, 386 |
| HpyAV | CCTTC | 2 cut(s) | 268, 346 |
| HpyCH4III | ACNGT | 1 cut(s) | 470 |
| HpyCH4IV | ACGT | 1 cut(s) | 382 |
| HpyCH4V | TGCA | 3 cut(s) | 128, 380, 511 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 362, 570, 618, 627, 639, 687 |
| HpyF3I | CTNAG | 2 cut(s) | 66, 444 |
| HpySE526I | ACGT | 1 cut(s) | 382 |
| Hsp92II | CATG | 5 cut(s) | 13, 91, 203, 637, 685 |
| Kzo9I | GATC | 3 cut(s) | 138, 229, 532 |
| LmnI | GCTCC | 3 cut(s) | 241, 277, 674 |
| LweI | GCATC | 2 cut(s) | 115, 193 |
| MaeII | ACGT | 1 cut(s) | 382 |
| MalI | GATC | 3 cut(s) | 140, 231, 534 |
| MboI | GATC | 3 cut(s) | 138, 229, 532 |
| MboII | GAAGA | 4 cut(s) | 215, 361, 382, 463 |
| MlsI | TGGCCA | 1 cut(s) | 59 |
| MluCI | AATT | 3 cut(s) | 129, 375, 486 |
| MluNI | TGGCCA | 1 cut(s) | 59 |
| MmeI | TCCRAC | 2 cut(s) | 131, 677 |
| Mox20I | TGGCCA | 1 cut(s) | 59 |
| MscI | TGGCCA | 1 cut(s) | 59 |
| MseI | TTAA | 2 cut(s) | 177, 500 |
| Msp20I | TGGCCA | 1 cut(s) | 59 |
| MspI | CCGG | 2 cut(s) | 328, 736 |
| MspR9I | CCNGG | 1 cut(s) | 329 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 362, 570, 618, 627, 639, 687 |
| NciI | CCSGG | 1 cut(s) | 329 |
| NcoI | CCATGG | 1 cut(s) | 87 |
| NdeI | CATATG | 1 cut(s) | 358 |
| NdeII | GATC | 3 cut(s) | 138, 229, 532 |
| NlaIII | CATG | 5 cut(s) | 13, 91, 203, 637, 685 |
| PagI | TCATGA | 1 cut(s) | 9 |
| PceI | AGGCCT | 1 cut(s) | 400 |
| PfeI | GAWTC | 1 cut(s) | 191 |
| PkrI | GCNGC | 3 cut(s) | 572, 620, 632 |
| RsaI | GTAC | 1 cut(s) | 80 |
| RsaNI | GTAC | 1 cut(s) | 79 |
| SaqAI | TTAA | 2 cut(s) | 177, 500 |
| SatI | GCNGC | 3 cut(s) | 571, 619, 631 |
| Sau3AI | GATC | 3 cut(s) | 138, 229, 532 |
| ScrFI | CCNGG | 1 cut(s) | 329 |
| SetI | ASST | 5 cut(s) | 45, 106, 385, 445, 679 |
| SfaNI | GCATC | 2 cut(s) | 115, 193 |
| SmlI | CTYRAG | 1 cut(s) | 266 |
| SmoI | CTYRAG | 1 cut(s) | 266 |
| Sse9I | AATT | 3 cut(s) | 129, 375, 486 |
| SseBI | AGGCCT | 1 cut(s) | 400 |
| StuI | AGGCCT | 1 cut(s) | 400 |
| StyD4I | CCNGG | 1 cut(s) | 327 |
| StyI | CCWWGG | 2 cut(s) | 60, 87 |
| TaaI | ACNGT | 1 cut(s) | 470 |
| TaiI | ACGT | 1 cut(s) | 385 |
| TasI | AATT | 3 cut(s) | 129, 375, 486 |
| TauI | GCSGC | 3 cut(s) | 573, 621, 633 |
| TfiI | GAWTC | 1 cut(s) | 191 |
| Tru1I | TTAA | 2 cut(s) | 177, 500 |
| Tru9I | TTAA | 2 cut(s) | 177, 500 |
| TscAI | CASTG | 5 cut(s) | 619, 667, 673, 712, 724 |
| TspDTI | ATGAA | 2 cut(s) | 26, 216 |
| TspRI | CASTG | 5 cut(s) | 619, 667, 673, 712, 724 |
| XapI | RAATTY | 1 cut(s) | 486 |