Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0005165

Physical Location & Seq

Genomic Coordinates Forward (+)

21841465 .. 21844035

Gene Structure 2571 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G171300.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 567 bp

ATGTCGTTCATGAAAGGAGATTTACTTACAAGAACCAGAAAGCTGGTGAAGGGCCTGGCCAAGGCGGAGCCTGTTTGGCTCAAAGCCATGGAACGGGTACCGCCTGTAACATTTCCTCGGGCAGATGCAATTCAGAAAATCACTCTCCCAGAGGATGTCTACATAAAGAAGTTTTTCCAAAAGCATCCAGATTCCAAACATGAGGATGCCATCAAGTTTTCTGCTTTTGATCCTCCTCCAGCCCGTATATTTGGTTTGAGGGTGCTTGAGTTGAAAGAGCAAGGGGTTTCTGAGCAGGAGGCAATGGCAGTAGCTGATATGGAATACCGTATGGAGAGAAAAGGAAAGAAAATGGCATATTCTCGCTTGAAGAAAATTGCACGCCTTCAAGGGAAGAAGCCTCCTCCCAACCCATATCCCAGTGCCATCAAGGAGATACAAGCTGAGGAAAAGAAGTATGTTCGCGACCGTTTTTTCAATCCCAGGATTAGGCAAATTTTGAGGAAATTGCAAGAGGAGCATGCAGCCGAGAGGCAGGACGGACTCCGAGGGGAAGGAGGTTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

189

Amino Acids

21.75

Weight (kDa)

9.93

Isoelectric Point (pI)

43.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005165)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26750
fragaria_vesca	FvH4_1g30250 FvH4_1g30250 FvH4_1g30250 FvH4_1g30250
malus_domestica	MD01G1063000.v1.1 MD07G1136300.v1.1
prunus_persica	Prupe.2G171300_v2.0.a1 Prupe.2G171300_v2.0.a1 Prupe.2G171300_v2.0.a1
pyrus_communis	pycom01g09340 pycom07g13360
rosa_chinensis	RchiOBHm_Chr6g0271051 RchiOBHm_Chr7g0220351
rosa_laevigata	RLG00000002228
rosa_multiflora	Rmu_sc0001136.1_g000086 Rmu_sc0001565.1_g000063
rosa_roxburghii	Rroxscaffold_3G00239510
rosa_rugosa	Rorug06G0058100 Rorug07G0193100
rosa_samantha	Rh6AG178100 Rh6BG181300 Rh6CG177100 Rh6DG169300 Rh7AG334400 Rh7BG325300 Rh7CG352100 Rh7DG331100
rosa_wichuraiana	Rw0G009890 Rw7G028270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	97
AccB1I	GGYRCC	1 cut(s)	97
AccI	GTMKAC	1 cut(s)	159
AccII	CGCG	1 cut(s)	465
AciI	CCGC	2 cut(s)	65, 101
AclWI	GGATC	1 cut(s)	224
AcoI	YGGCCR	1 cut(s)	57
AcsI	RAATTY	1 cut(s)	495
AfaI	GTAC	1 cut(s)	99
AfiI	CCNNNNNNNGG	3 cut(s)	61, 93, 489
AgsI	TTSAA	4 cut(s)	274, 370, 389, 478
AjnI	CCWGG	2 cut(s)	54, 482
AluBI	AGCT	3 cut(s)	43, 314, 443
AluI	AGCT	3 cut(s)	43, 314, 443
AlwI	GGATC	1 cut(s)	224
AlwNI	CAGNNNCTG	1 cut(s)	314
Ama87I	CYCGRG	1 cut(s)	117
AoxI	GGCC	2 cut(s)	52, 57
ApeKI	GCWGC	1 cut(s)	524
ApoI	RAATTY	1 cut(s)	495
Asp700I	GAANNNNTTC	1 cut(s)	173
Asp718I	GGTACC	1 cut(s)	97
AspS9I	GGNCC	1 cut(s)	52
AsuHPI	GGTGA	1 cut(s)	58
AvaI	CYCGRG	1 cut(s)	117
BalI	TGGCCA	1 cut(s)	59
BanI	GGYRCC	1 cut(s)	97
BbvCI	CCTCAGC	1 cut(s)	444
BbvI	GCAGC	1 cut(s)	536
BccI	CCATC	2 cut(s)	218, 434
BciT130I	CCWGG	2 cut(s)	56, 484
BfaI	CTAG	1 cut(s)	565
BglI	GCCNNNNNGGC	1 cut(s)	76
BisI	GCNGC	1 cut(s)	525
BlsI	GCNGC	1 cut(s)	526
Bme1390I	CCNGG	2 cut(s)	56, 484
BmeT110I	CYCGRG	1 cut(s)	117
BmgT120I	GGNCC	1 cut(s)	52
BmiI	GGNNCC	3 cut(s)	69, 99, 562
BmrFI	CCNGG	2 cut(s)	56, 484
BmrI	ACTGGG	1 cut(s)	414
BmsI	GCATC	3 cut(s)	115, 193, 196
BmuI	ACTGGG	1 cut(s)	414
BpmI	CTGGAG	1 cut(s)	222
Bpu10I	CCTNAGC	1 cut(s)	444
BpuEI	CTTGAG	1 cut(s)	287
BsaJI	CCNNGG	5 cut(s)	60, 87, 116, 482, 547
Bsc4I	CCNNNNNNNGG	3 cut(s)	61, 93, 489
Bse1I	ACTGG	1 cut(s)	420
Bse3DI	GCAATG	1 cut(s)	309
BseBI	CCWGG	2 cut(s)	56, 484
BseDI	CCNNGG	5 cut(s)	60, 87, 116, 482, 547
BseGI	GGATG	3 cut(s)	160, 184, 211
BseLI	CCNNNNNNNGG	3 cut(s)	61, 93, 489
BseMI	GCAATG	1 cut(s)	309
BseMII	CTCAG	2 cut(s)	282, 435
BseNI	ACTGG	1 cut(s)	420
BseRI	GAGGAG	3 cut(s)	225, 393, 530
BseXI	GCAGC	1 cut(s)	536
Bsh1236I	CGCG	1 cut(s)	465
Bsh1285I	CGRYCG	1 cut(s)	469
BshFI	GGCC	2 cut(s)	54, 59
BshNI	GGYRCC	1 cut(s)	97
BsiEI	CGRYCG	1 cut(s)	469
BsiHKCI	CYCGRG	1 cut(s)	117
BslI	CCNNNNNNNGG	3 cut(s)	61, 93, 489
BsnI	GGCC	2 cut(s)	54, 59
BsoBI	CYCGRG	1 cut(s)	117
Bsp143I	GATC	1 cut(s)	229
Bsp19I	CCATGG	1 cut(s)	87
Bsp68I	TCGCGA	1 cut(s)	465
BspACI	CCGC	2 cut(s)	65, 101
BspANI	GGCC	2 cut(s)	54, 59
BspCNI	CTCAG	2 cut(s)	283, 436
BspFNI	CGCG	1 cut(s)	465
BspHI	TCATGA	1 cut(s)	9
BspLI	GGNNCC	3 cut(s)	69, 99, 562
BspPI	GGATC	1 cut(s)	224
BspT107I	GGYRCC	1 cut(s)	97
BsrDI	GCAATG	1 cut(s)	309
BsrI	ACTGG	1 cut(s)	420
BssECI	CCNNGG	5 cut(s)	60, 87, 116, 482, 547
BssMI	GATC	1 cut(s)	229
BssT1I	CCWWGG	2 cut(s)	60, 87
Bst2UI	CCWGG	2 cut(s)	56, 484
Bst4CI	ACNGT	2 cut(s)	329, 470
BstC8I	GCNNGC	2 cut(s)	382, 522
BstDEI	CTNAG	2 cut(s)	291, 444
BstDSI	CCRYGG	1 cut(s)	87
BstENI	CCTNNNNNAGG	1 cut(s)	59
BstF5I	GGATG	3 cut(s)	160, 184, 211
BstFNI	CGCG	1 cut(s)	465
BstKTI	GATC	1 cut(s)	232
BstMBI	GATC	1 cut(s)	229
BstMCI	CGRYCG	1 cut(s)	469
BstMWI	GCNNNNNNNGC	2 cut(s)	76, 517
BstNI	CCWGG	2 cut(s)	56, 484
BstNSI	RCATGY	1 cut(s)	524
BstSCI	CCNGG	2 cut(s)	54, 482
BstUI	CGCG	1 cut(s)	465
BstV1I	GCAGC	1 cut(s)	536
BstXI	CCANNNNNNTGG	1 cut(s)	43
BsuRI	GGCC	2 cut(s)	54, 59
BtgI	CCRYGG	1 cut(s)	87
BtsCI	GGATG	3 cut(s)	160, 184, 211
BtsIMutI	CAGTG	1 cut(s)	427
BtuMI	TCGCGA	1 cut(s)	465
Cac8I	GCNNGC	2 cut(s)	382, 522
CaiI	CAGNNNCTG	1 cut(s)	314
CciI	TCATGA	1 cut(s)	9
Cfr13I	GGNCC	1 cut(s)	52
Csp6I	GTAC	1 cut(s)	98
CviAII	CATG	4 cut(s)	10, 88, 200, 521
CviQI	GTAC	1 cut(s)	98
DdeI	CTNAG	2 cut(s)	291, 444
DpnI	GATC	1 cut(s)	231
DpnII	GATC	1 cut(s)	229
EaeI	YGGCCR	1 cut(s)	57
EciI	GGCGGA	1 cut(s)	80
Eco130I	CCWWGG	2 cut(s)	60, 87
Eco88I	CYCGRG	1 cut(s)	117
EcoNI	CCTNNNNNAGG	1 cut(s)	59
EcoO109I	RGGNCCY	1 cut(s)	52
EcoRII	CCWGG	2 cut(s)	54, 482
EcoT14I	CCWWGG	2 cut(s)	60, 87
ErhI	CCWWGG	2 cut(s)	60, 87
FaeI	CATG	4 cut(s)	13, 91, 203, 524
FatI	CATG	4 cut(s)	9, 87, 199, 520
FblI	GTMKAC	1 cut(s)	159
Fnu4HI	GCNGC	1 cut(s)	525
FokI	GGATG	3 cut(s)	167, 171, 218
Fsp4HI	GCNGC	1 cut(s)	525
FspBI	CTAG	1 cut(s)	565
GluI	GCNGC	1 cut(s)	525
GsuI	CTGGAG	1 cut(s)	222
HaeIII	GGCC	2 cut(s)	54, 59
Hin1II	CATG	4 cut(s)	13, 91, 203, 524
HinfI	GANTC	2 cut(s)	191, 543
HphI	GGTGA	1 cut(s)	58
Hpy166II	GTNNAC	1 cut(s)	160
Hpy188I	TCNGA	3 cut(s)	135, 292, 548
Hpy188III	TCNNGA	3 cut(s)	10, 188, 464
Hpy8I	GTNNAC	1 cut(s)	160
HpyAV	CCTTC	3 cut(s)	43, 395, 548
HpyCH4III	ACNGT	2 cut(s)	329, 470
HpyCH4V	TGCA	4 cut(s)	128, 380, 511, 524
HpyF10VI	GCNNNNNNNGC	2 cut(s)	76, 517
HpyF3I	CTNAG	2 cut(s)	291, 444
Hsp92II	CATG	4 cut(s)	13, 91, 203, 524
KpnI	GGTACC	1 cut(s)	101
Kzo9I	GATC	1 cut(s)	229
LmnI	GCTCC	2 cut(s)	67, 517
Lsp1109I	GCAGC	1 cut(s)	536
LweI	GCATC	3 cut(s)	115, 193, 196
MaeI	CTAG	1 cut(s)	565
MaeIII	GTNAC	1 cut(s)	106
MalI	GATC	1 cut(s)	231
MboI	GATC	1 cut(s)	229
MboII	GAAGA	2 cut(s)	382, 406
MlsI	TGGCCA	1 cut(s)	59
MluCI	AATT	4 cut(s)	129, 375, 495, 506
MluNI	TGGCCA	1 cut(s)	59
MlyI	GAGTC	1 cut(s)	537
Mox20I	TGGCCA	1 cut(s)	59
MroXI	GAANNNNTTC	1 cut(s)	173
MscI	TGGCCA	1 cut(s)	59
MslI	CAYNNNNRTG	1 cut(s)	204
Msp20I	TGGCCA	1 cut(s)	59
MspR9I	CCNGG	2 cut(s)	56, 484
MvaI	CCWGG	2 cut(s)	56, 484
MvnI	CGCG	1 cut(s)	465
MwoI	GCNNNNNNNGC	2 cut(s)	76, 517
NcoI	CCATGG	1 cut(s)	87
NdeII	GATC	1 cut(s)	229
NlaIII	CATG	4 cut(s)	13, 91, 203, 524
NlaIV	GGNNCC	3 cut(s)	69, 99, 562
NmeAIII	GCCGAG	1 cut(s)	553
NruI	TCGCGA	1 cut(s)	465
NspI	RCATGY	1 cut(s)	524
PaeI	GCATGC	1 cut(s)	524
PagI	TCATGA	1 cut(s)	9
PdmI	GAANNNNTTC	1 cut(s)	173
PfeI	GAWTC	1 cut(s)	191
PkrI	GCNGC	1 cut(s)	526
PleI	GAGTC	1 cut(s)	537
PpsI	GAGTC	1 cut(s)	537
Psp6I	CCWGG	2 cut(s)	54, 482
PspGI	CCWGG	2 cut(s)	54, 482
PspN4I	GGNNCC	3 cut(s)	69, 99, 562
PspPI	GGNCC	1 cut(s)	52
PstNI	CAGNNNCTG	1 cut(s)	314
RruI	TCGCGA	1 cut(s)	465
RsaI	GTAC	1 cut(s)	99
RsaNI	GTAC	1 cut(s)	98
RseI	CAYNNNNRTG	1 cut(s)	204
SatI	GCNGC	1 cut(s)	525
Sau3AI	GATC	1 cut(s)	229
Sau96I	GGNCC	1 cut(s)	52
SchI	GAGTC	1 cut(s)	537
ScrFI	CCNGG	2 cut(s)	56, 484
SetI	ASST	4 cut(s)	45, 316, 445, 562
SfaNI	GCATC	3 cut(s)	115, 193, 196
SmiMI	CAYNNNNRTG	1 cut(s)	204
SmlI	CTYRAG	1 cut(s)	266
SmoI	CTYRAG	1 cut(s)	266
SphI	GCATGC	1 cut(s)	524
Sse9I	AATT	4 cut(s)	129, 375, 495, 506
SsiI	CCGC	2 cut(s)	65, 101
SspMI	CTAG	1 cut(s)	565
StyD4I	CCNGG	2 cut(s)	54, 482
StyI	CCWWGG	2 cut(s)	60, 87
TaaI	ACNGT	2 cut(s)	329, 470
TasI	AATT	4 cut(s)	129, 375, 495, 506
TfiI	GAWTC	1 cut(s)	191
TscAI	CASTG	1 cut(s)	427
TseI	GCWGC	1 cut(s)	524
TspDTI	ATGAA	1 cut(s)	26
TspGWI	ACGGA	1 cut(s)	555
TspRI	CASTG	1 cut(s)	427
XagI	CCTNNNNNAGG	1 cut(s)	59
XapI	RAATTY	1 cut(s)	495
XceI	RCATGY	1 cut(s)	524
XmiI	GTMKAC	1 cut(s)	159
XmnI	GAANNNNTTC	1 cut(s)	173
XspI	CTAG	1 cut(s)	565

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.