AT1G30515

NADPH-hemoprotein reductase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0016687
Physical Location & Seq
Reverse (-)
10809200 .. 10809939
740 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G30515.1

Sequence Viewer

Length: 435 bp
ATGGCCGCACACAAAACCAGTGAGTATCCACCGTTGATTTCAATGCTGATCATGTTCATCATCGTCCTAGAATCAACGATTATCAATGCAAGAGAATTACGACCGTCCGATCACGGTCTCGAGTACTACTACGAACCAGGCGAGTCATCAGAAATGACGTCATTCTTTGGACCACCTTCTTCAAATGATCTAACGTCGATATCATCACCGTCTAGCTCGATATTGCCGAGTGCGGTGAAGTCTCCAATGAAGACGCTATCAAAAGATCAGGATGATGATCGCGTGATGAATCACGTGCTGGTTGTGGGCAGCTTGGTGTGTGGACTCTCCGGCGTGGCTTTGATGGTCGCTTCTGCTCTCATTTATTTTCTCGGTTACCCGAAAACGCAAAATTCCTCTGTTAATTGTGATCACATTCATAATAATACCAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000096 GO:0000097 GO:0000098 GO:0000166 GO:0003674 GO:0003824 GO:0003958 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006520 GO:0006534 GO:0006555 GO:0006575 GO:0006725 GO:0006732 GO:0006760 GO:0006766 GO:0006767 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009056 GO:0009058 GO:0009063 GO:0009066 GO:0009067 GO:0009069 GO:0009086 GO:0009116 GO:0009119 GO:0009235 GO:0009987 GO:0010181 GO:0016053 GO:0016054 GO:0016491 GO:0016651 GO:0016653 GO:0016722 GO:0016723 GO:0017144 GO:0019752 GO:0030586 GO:0031647 GO:0032259 GO:0032553 GO:0033013 GO:0033353 GO:0034641 GO:0036094 GO:0042278 GO:0042558 GO:0043086 GO:0043167 GO:0043168 GO:0043170 GO:0043412 GO:0043414 GO:0043418 GO:0043436 GO:0043603 GO:0043648 GO:0044092 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044272 GO:0044273 GO:0044281 GO:0044282 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0044728 GO:0046128 GO:0046394 GO:0046395 GO:0046439 GO:0046483 GO:0046498 GO:0046500 GO:0046655 GO:0047138 GO:0048037 GO:0050444 GO:0050660 GO:0050661 GO:0050662 GO:0050667 GO:0050790 GO:0050821 GO:0051186 GO:0051339 GO:0051350 GO:0055086 GO:0055114 GO:0065007 GO:0065008 GO:0065009 GO:0070402 GO:0071704 GO:0071949 GO:0072521 GO:0090304 GO:0097159 GO:0097367 GO:1901135 GO:1901265 GO:1901360 GO:1901363 GO:1901564 GO:1901565 GO:1901566 GO:1901575 GO:1901576 GO:1901605 GO:1901606 GO:1901607 GO:1901657 GO:1904041 GO:1904042
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAD_binding_1 Flavodoxin_1 NAD_binding_1

Protein Analysis

144

Amino Acids

15.68

Weight (kDa)

5.39

Isoelectric Point (pI)

51.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016687)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G30515 AT4G21740
fragaria_vesca FvH4_3g10110 FvH4_3g10110
malus_domestica MD05G1272900.v1.1 MD10G1253000.v1.1
prunus_persica Prupe.4G090500_v2.0.a1
pyrus_communis pycom10g20870
rosa_chinensis RchiOBHm_Chr5g0016051
rosa_laevigata RLG00000032237
rosa_multiflora Rmu_sc0000299.1_g000015
rosa_roxburghii Rroxscaffold_1G00060600
rosa_rugosa Rorug05G0030900
rosa_wichuraiana Rw5G010770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 161
AccII CGCG 1 cut(s) 282
AciI CCGC 2 cut(s) 6, 233
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 1 cut(s) 391
AcvI CACGTG 1 cut(s) 295
AcyI GRCGYC 1 cut(s) 158
AfaI GTAC 1 cut(s) 125
AgsI TTSAA 2 cut(s) 42, 183
AjnI CCWGG 1 cut(s) 136
AluBI AGCT 2 cut(s) 216, 312
AluI AGCT 2 cut(s) 216, 312
Alw26I GTCTC 2 cut(s) 122, 246
Ama87I CYCGRG 1 cut(s) 119
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 1 cut(s) 309
ApoI RAATTY 1 cut(s) 391
AspS9I GGNCC 1 cut(s) 170
AsuHPI GGTGA 2 cut(s) 198, 247
AvaI CYCGRG 1 cut(s) 119
AvaII GGWCC 1 cut(s) 170
BbrPI CACGTG 1 cut(s) 295
BbsI GAAGAC 1 cut(s) 257
BbvI GCAGC 1 cut(s) 321
BccI CCATC 1 cut(s) 337
BciT130I CCWGG 1 cut(s) 138
BciVI GTATCC 1 cut(s) 36
BclI TGATCA 2 cut(s) 48, 409
BcoDI GTCTC 2 cut(s) 122, 246
BfaI CTAG 2 cut(s) 68, 213
BfuI GTATCC 1 cut(s) 36
BisI GCNGC 2 cut(s) 6, 310
BlsI GCNGC 2 cut(s) 7, 311
BmcAI AGTACT 1 cut(s) 125
Bme1390I CCNGG 1 cut(s) 138
Bme18I GGWCC 1 cut(s) 170
BmeT110I CYCGRG 1 cut(s) 119
BmgT120I GGNCC 1 cut(s) 170
BmrFI CCNGG 1 cut(s) 138
BpiI GAAGAC 1 cut(s) 257
BsaAI YACGTR 1 cut(s) 295
BsaBI GATNNNNATC 1 cut(s) 276
BsaHI GRCGYC 1 cut(s) 158
BsaI GGTCTC 1 cut(s) 122
Bse1I ACTGG 1 cut(s) 18
Bse8I GATNNNNATC 1 cut(s) 276
BseBI CCWGG 1 cut(s) 138
BseGI GGATG 1 cut(s) 277
BseJI GATNNNNATC 1 cut(s) 276
BseNI ACTGG 1 cut(s) 18
BseXI GCAGC 1 cut(s) 321
Bsh1236I CGCG 1 cut(s) 282
Bsh1285I CGRYCG 1 cut(s) 104
BshFI GGCC 1 cut(s) 5
BsiEI CGRYCG 1 cut(s) 104
BsiHKCI CYCGRG 1 cut(s) 119
BsiSI CCGG 1 cut(s) 330
BsmAI GTCTC 2 cut(s) 122, 246
BsnI GGCC 1 cut(s) 5
Bso31I GGTCTC 1 cut(s) 122
BsoBI CYCGRG 1 cut(s) 119
Bsp143I GATC 6 cut(s) 48, 109, 187, 265, 277, 409
BspACI CCGC 2 cut(s) 6, 233
BspANI GGCC 1 cut(s) 5
BspFNI CGCG 1 cut(s) 282
BspTNI GGTCTC 1 cut(s) 122
BsrI ACTGG 1 cut(s) 18
BssMI GATC 6 cut(s) 48, 109, 187, 265, 277, 409
BssNI GRCGYC 1 cut(s) 158
Bst2UI CCWGG 1 cut(s) 138
Bst4CI ACNGT 4 cut(s) 33, 105, 116, 210
BstACI GRCGYC 1 cut(s) 158
BstBAI YACGTR 1 cut(s) 295
BstEII GGTNACC 1 cut(s) 374
BstF5I GGATG 1 cut(s) 277
BstFNI CGCG 1 cut(s) 282
BstKTI GATC 6 cut(s) 51, 112, 190, 268, 280, 412
BstMAI GTCTC 2 cut(s) 122, 246
BstMBI GATC 6 cut(s) 48, 109, 187, 265, 277, 409
BstMCI CGRYCG 1 cut(s) 104
BstNI CCWGG 1 cut(s) 138
BstPI GGTNACC 1 cut(s) 374
BstSCI CCNGG 1 cut(s) 136
BstUI CGCG 1 cut(s) 282
BstV1I GCAGC 1 cut(s) 321
BstV2I GAAGAC 1 cut(s) 257
BsuI GTATCC 1 cut(s) 36
BsuRI GGCC 1 cut(s) 5
BtsCI GGATG 1 cut(s) 277
BtsIMutI CAGTG 1 cut(s) 25
Cfr13I GGNCC 1 cut(s) 170
CseI GACGC 1 cut(s) 262
Csp6I GTAC 1 cut(s) 124
CviAII CATG 1 cut(s) 52
CviJI RGCY 4 cut(s) 5, 216, 312, 338
CviKI_1 RGCY 4 cut(s) 5, 216, 312, 338
CviQI GTAC 1 cut(s) 124
DpnI GATC 6 cut(s) 50, 111, 189, 267, 279, 411
DpnII GATC 6 cut(s) 48, 109, 187, 265, 277, 409
EaeI YGGCCR 1 cut(s) 3
Eco31I GGTCTC 1 cut(s) 122
Eco32I GATATC 1 cut(s) 201
Eco47I GGWCC 1 cut(s) 170
Eco72I CACGTG 1 cut(s) 295
Eco88I CYCGRG 1 cut(s) 119
Eco91I GGTNACC 1 cut(s) 374
EcoO65I GGTNACC 1 cut(s) 374
EcoRII CCWGG 1 cut(s) 136
EcoRV GATATC 1 cut(s) 201
FaeI CATG 1 cut(s) 55
FaiI YATR 2 cut(s) 53, 420
FatI CATG 1 cut(s) 51
FbaI TGATCA 2 cut(s) 48, 409
Fnu4HI GCNGC 2 cut(s) 6, 310
FokI GGATG 1 cut(s) 284
Fsp4HI GCNGC 2 cut(s) 6, 310
FspBI CTAG 2 cut(s) 68, 213
GluI GCNGC 2 cut(s) 6, 310
HaeIII GGCC 1 cut(s) 5
HapII CCGG 1 cut(s) 330
HgaI GACGC 1 cut(s) 262
Hin1I GRCGYC 1 cut(s) 158
Hin1II CATG 1 cut(s) 55
HinfI GANTC 4 cut(s) 71, 143, 289, 324
HpaII CCGG 1 cut(s) 330
HphI GGTGA 2 cut(s) 198, 247
Hpy166II GTNNAC 1 cut(s) 323
Hpy188I TCNGA 2 cut(s) 109, 151
Hpy188III TCNNGA 2 cut(s) 119, 269
Hpy8I GTNNAC 1 cut(s) 323
Hpy99I CGWCG 1 cut(s) 199
HpyAV CCTTC 1 cut(s) 186
HpyCH4III ACNGT 4 cut(s) 33, 105, 116, 210
HpyCH4IV ACGT 3 cut(s) 158, 194, 294
HpyCH4V TGCA 1 cut(s) 89
HpySE526I ACGT 3 cut(s) 158, 194, 294
Hsp92I GRCGYC 1 cut(s) 158
Hsp92II CATG 1 cut(s) 55
Ksp22I TGATCA 2 cut(s) 48, 409
Kzo9I GATC 6 cut(s) 48, 109, 187, 265, 277, 409
LpnPI CCDG 6 cut(s) 31, 123, 150, 254, 284, 343
Lsp1109I GCAGC 1 cut(s) 321
MaeI CTAG 2 cut(s) 68, 213
MaeII ACGT 3 cut(s) 158, 194, 294
MaeIII GTNAC 1 cut(s) 374
MalI GATC 6 cut(s) 50, 111, 189, 267, 279, 411
MboI GATC 6 cut(s) 48, 109, 187, 265, 277, 409
MboII GAAGA 2 cut(s) 171, 262
MluCI AATT 3 cut(s) 95, 391, 403
MlyI GAGTC 2 cut(s) 152, 318
MnlI CCTC 1 cut(s) 406
MseI TTAA 1 cut(s) 402
MspI CCGG 1 cut(s) 330
MspR9I CCNGG 1 cut(s) 138
MvaI CCWGG 1 cut(s) 138
MvnI CGCG 1 cut(s) 282
NdeII GATC 6 cut(s) 48, 109, 187, 265, 277, 409
NlaIII CATG 1 cut(s) 55
NmeAIII GCCGAG 1 cut(s) 252
PaeR7I CTCGAG 1 cut(s) 119
PcsI WCGNNNNNNNCGW 2 cut(s) 138, 224
PfeI GAWTC 2 cut(s) 71, 289
PkrI GCNGC 2 cut(s) 7, 311
PleI GAGTC 2 cut(s) 151, 318
PmaCI CACGTG 1 cut(s) 295
PmlI CACGTG 1 cut(s) 295
PpsI GAGTC 2 cut(s) 151, 318
Ppu21I YACGTR 1 cut(s) 295
Psp6I CCWGG 1 cut(s) 136
PspCI CACGTG 1 cut(s) 295
PspEI GGTNACC 1 cut(s) 374
PspGI CCWGG 1 cut(s) 136
PspPI GGNCC 1 cut(s) 170
RsaI GTAC 1 cut(s) 125
RsaNI GTAC 1 cut(s) 124
SaqAI TTAA 1 cut(s) 402
SatI GCNGC 2 cut(s) 6, 310
Sau3AI GATC 6 cut(s) 48, 109, 187, 265, 277, 409
Sau96I GGNCC 1 cut(s) 170
ScaI AGTACT 1 cut(s) 125
SchI GAGTC 2 cut(s) 152, 318
ScrFI CCNGG 1 cut(s) 138
SetI ASST 6 cut(s) 161, 178, 197, 218, 297, 314
Sfr274I CTCGAG 1 cut(s) 119
SinI GGWCC 1 cut(s) 170
SlaI CTCGAG 1 cut(s) 119
SmlI CTYRAG 1 cut(s) 119
SmoI CTYRAG 1 cut(s) 119
Sse9I AATT 3 cut(s) 95, 391, 403
SsiI CCGC 2 cut(s) 6, 233
SspMI CTAG 2 cut(s) 68, 213
StyD4I CCNGG 1 cut(s) 136
TaaI ACNGT 4 cut(s) 33, 105, 116, 210
TaiI ACGT 3 cut(s) 161, 197, 297
TaqI TCGA 3 cut(s) 120, 197, 218
TasI AATT 3 cut(s) 95, 391, 403
TatI WGTACW 1 cut(s) 123
TauI GCSGC 1 cut(s) 8
TfiI GAWTC 2 cut(s) 71, 289
Tru1I TTAA 1 cut(s) 402
Tru9I TTAA 1 cut(s) 402
TscAI CASTG 1 cut(s) 25
TseI GCWGC 1 cut(s) 309
TspDTI ATGAA 4 cut(s) 46, 263, 302, 407
TspRI CASTG 1 cut(s) 25
VpaK11BI GGWCC 1 cut(s) 170
XapI RAATTY 1 cut(s) 391
XhoI CTCGAG 1 cut(s) 119
XspI CTAG 2 cut(s) 68, 213
ZraI GACGTC 1 cut(s) 159
ZrmI AGTACT 1 cut(s) 125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.